pycom14g16520

Activating signal cointegrator

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
18764393 .. 18766497
2105 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g16520.4

Sequence Viewer

Length: 1269 bp
ATGGGGGCGGCGGGAGAATGGCTGGAGAAGGCGTTGGTGGATCTATGCCGGAAGATGGAAACCGGGGGTTTGGATAAGGATATGATATCGGGTTTGGTCTCCTACTGTGAGCTCGCCGATCCTCAGGACGCCAAGGAGTACCTCGACAACATCATTGGGCAGGAGGTGGGCAAATCTGTGATTGAGGAATATCTACAGAAACGAGGTCGCTCAGATCTTTGCAGCAGCACCGGGGTTGTTCCAACCTCAAGTTTGCATGCCTATGTTAAACCACCCTCAAATGAAGGTTCTGCAAGTGGATCAAAGAAACCGTTGAAAACTCCGAAAGTGGCTAGAGACCCCGGTGATCAAACAACTTCCAGCAATCAAGTAAAGCAGGTTCCAGCTAAGACCAGCGAGTCAAAACCCACAAGTAACACGAACCAAGGCAACTCTAAGAAGAAGAAAGCTGGGAAAGTTGTTTCACTTGCAGAGGTTTCCAAAGGATCAGTTGTATTCAACCAGGGGAAGCCATGCTCATGCCAAGCCCGTCGCCACAGACTTGTGAGCAATTGTTTATCGTGTGGGAAGATAGTCTGTGAGCAAGAGGGCGAGGGGCCTTGCAATTTTTGTGGAGCTCTTGTGCTGAAGGAAGGCAGCACGTATGCTGGTTTGGAGGAAAGTTTCACTCCCACATCAGATGCTGAAGCAGTAGCAGAAGCTTATGCAAAGAGACTCGTTGAGTATGACCGAGACTCTGCAGCACGAACTACAGTTATTGATGACCAAAGTGACTACTATGAAATTGAGGGGAATAGTTGGTTGTCAAAGGAGGAAAAGGAACTTCTGACAAAGAAGCAGGAGGAGATTGCAGAAGCTGAGCGGATCAAACGAAGTAAAGTAGTTGTATCTTTTGACTTGGTTGGTCGCAAGGTCCTTGTAAATGAAGACGAAGCTTCTGAAGTAGAATCAGAAAGCAGAATATTGAGGCCCCGAGATGAGAAGGAAGTGAACCGCATCAGACCAAACCCTTCTCTTAAGGTACAACCAGTATTTGTGGATCCAGGCCCTGGTAAGAAGCCTGTTCAAGGCAGGAAGTCAAACAAGACCCTAACAAAAGGCTTGTGCTTGGAGATTACCGGGAGGGTGCAGCACGTCAGCGATGAATTAAAACATCTTATGGTGGATAATCAATTAGAAACAGCTTCAAATGGGAAGTTTTCGCAAGGTATGCCTGTAAGTGGGGGTACGCTCGATGATGATGGAGAATGCTTTCTGGATTTCCATTAA

Protein Analysis

423

Amino Acids

46.01

Weight (kDa)

5.81

Isoelectric Point (pI)

38.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012117)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 397
Acc36I ACCTGC 1 cut(s) 367
AccB7I CCANNNNNTGG 1 cut(s) 1049
AccBSI CCGCTC 1 cut(s) 862
AciI CCGC 4 cut(s) 8, 11, 862, 994
AclWI GGATC 7 cut(s) 48, 113, 307, 493, 872, 1034, 1047
AcuI CTGAAG 3 cut(s) 647, 705, 960
AcyI GRCGYC 1 cut(s) 129
AfaI GTAC 3 cut(s) 140, 1023, 1228
AfiI CCNNNNNNNGG 4 cut(s) 55, 1049, 1067, 1220
AflII CTTAAG 1 cut(s) 1016
AgsI TTSAA 4 cut(s) 316, 499, 1067, 1188
AjiI CACGTC 1 cut(s) 1135
AjnI CCWGG 3 cut(s) 501, 1042, 1048
AluBI AGCT 8 cut(s) 112, 386, 449, 617, 701, 857, 935, 1184
AluI AGCT 8 cut(s) 112, 386, 449, 617, 701, 857, 935, 1184
Alw21I GWGCWC 2 cut(s) 114, 619
Alw26I GTCTC 4 cut(s) 103, 330, 706, 726
AlwI GGATC 7 cut(s) 48, 113, 307, 493, 872, 1034, 1047
AlwNI CAGNNNCTG 3 cut(s) 683, 857, 1049
Ama87I CYCGRG 1 cut(s) 972
AoxI GGCC 3 cut(s) 596, 968, 1045
ApeKI GCWGC 5 cut(s) 222, 225, 636, 740, 1129
Asp700I GAANNNNTTC 1 cut(s) 1251
AspS9I GGNCC 4 cut(s) 596, 913, 969, 1046
AsuC2I CCSGG 4 cut(s) 64, 232, 342, 1120
AsuHPI GGTGA 1 cut(s) 356
AvaI CYCGRG 1 cut(s) 972
AvaII GGWCC 1 cut(s) 913
AxyI CCTNAGG 1 cut(s) 123
BamHI GGATCC 1 cut(s) 1039
BanII GRGCYC 2 cut(s) 114, 619
BbsI GAAGAC 1 cut(s) 933
Bbv12I GWGCWC 2 cut(s) 114, 619
BbvI GCAGC 5 cut(s) 234, 237, 648, 752, 1141
BccI CCATC 2 cut(s) 49, 1235
BciT130I CCWGG 3 cut(s) 503, 1044, 1050
BclI TGATCA 1 cut(s) 346
BcnI CCSGG 4 cut(s) 64, 232, 342, 1120
BcoDI GTCTC 4 cut(s) 103, 330, 706, 726
BfaI CTAG 1 cut(s) 333
BfmI CTRYAG 3 cut(s) 194, 738, 750
BfrI CTTAAG 1 cut(s) 1016
BfuAI ACCTGC 1 cut(s) 367
BglII AGATCT 1 cut(s) 214
BisI GCNGC 6 cut(s) 9, 223, 226, 637, 741, 1130
BlpI GCTNAGC 1 cut(s) 858
BlsI GCNGC 6 cut(s) 10, 224, 227, 638, 742, 1131
Bme1390I CCNGG 7 cut(s) 64, 232, 342, 503, 1044, 1050, 1120
Bme18I GGWCC 1 cut(s) 913
BmeT110I CYCGRG 1 cut(s) 972
BmgBI CACGTC 1 cut(s) 1135
BmgT120I GGNCC 4 cut(s) 596, 913, 969, 1046
BmiI GGNNCC 4 cut(s) 381, 597, 971, 1041
BmrFI CCNGG 7 cut(s) 64, 232, 342, 503, 1044, 1050, 1120
BmsI GCATC 2 cut(s) 670, 1005
BpiI GAAGAC 1 cut(s) 933
BpmI CTGGAG 1 cut(s) 44
Bpu1102I GCTNAGC 1 cut(s) 858
BpuEI CTTGAG 1 cut(s) 232
BpuMI CCSGG 4 cut(s) 64, 232, 342, 1120
BsaAI YACGTR 1 cut(s) 642
BsaHI GRCGYC 1 cut(s) 129
BsaI GGTCTC 2 cut(s) 103, 330
BsaJI CCNNGG 7 cut(s) 63, 132, 231, 340, 424, 502, 1048
BsaXI ACNNNNNCTCC 4 cut(s) 17, 47, 606, 636
Bsc4I CCNNNNNNNGG 4 cut(s) 55, 1049, 1067, 1220
Bse1I ACTGG 1 cut(s) 1028
Bse21I CCTNAGG 1 cut(s) 123
BseBI CCWGG 3 cut(s) 503, 1044, 1050
BseDI CCNNGG 7 cut(s) 63, 132, 231, 340, 424, 502, 1048
BseLI CCNNNNNNNGG 4 cut(s) 55, 1049, 1067, 1220
BseMII CTCAG 3 cut(s) 137, 225, 849
BseNI ACTGG 1 cut(s) 1028
BseRI GAGGAG 1 cut(s) 857
BseXI GCAGC 5 cut(s) 234, 237, 648, 752, 1141
BseYI CCCAGC 1 cut(s) 449
BsgI GTGCAG 1 cut(s) 1148
BshFI GGCC 3 cut(s) 598, 970, 1047
BsiHKAI GWGCWC 2 cut(s) 114, 619
BsiHKCI CYCGRG 1 cut(s) 972
BsiSI CCGG 5 cut(s) 49, 63, 231, 342, 1119
BslI CCNNNNNNNGG 4 cut(s) 55, 1049, 1067, 1220
BsmAI GTCTC 4 cut(s) 103, 330, 706, 726
BsmI GAATGC 1 cut(s) 1253
BsnI GGCC 3 cut(s) 598, 970, 1047
Bso31I GGTCTC 2 cut(s) 103, 330
BsoBI CYCGRG 1 cut(s) 972
Bsp1286I GDGCHC 2 cut(s) 114, 619
Bsp143I GATC 8 cut(s) 40, 118, 214, 299, 346, 485, 864, 1039
Bsp1720I GCTNAGC 1 cut(s) 858
BspACI CCGC 4 cut(s) 8, 11, 862, 994
BspANI GGCC 3 cut(s) 598, 970, 1047
BspCNI CTCAG 3 cut(s) 136, 224, 850
BspLI GGNNCC 4 cut(s) 381, 597, 971, 1041
BspMAI CTGCAG 1 cut(s) 742
BspMI ACCTGC 1 cut(s) 367
BspPI GGATC 7 cut(s) 48, 113, 307, 493, 872, 1034, 1047
BspTI CTTAAG 1 cut(s) 1016
BspTNI GGTCTC 2 cut(s) 103, 330
BsrBI CCGCTC 1 cut(s) 862
BsrI ACTGG 1 cut(s) 1028
BssECI CCNNGG 7 cut(s) 63, 132, 231, 340, 424, 502, 1048
BssMI GATC 8 cut(s) 40, 118, 214, 299, 346, 485, 864, 1039
BssNI GRCGYC 1 cut(s) 129
BssT1I CCWWGG 2 cut(s) 132, 424
Bst2UI CCWGG 3 cut(s) 503, 1044, 1050
Bst4CI ACNGT 3 cut(s) 107, 312, 754
BstACI GRCGYC 1 cut(s) 129
BstAFI CTTAAG 1 cut(s) 1016
BstAPI GCANNNNNTGC 1 cut(s) 1210
BstBAI YACGTR 1 cut(s) 642
BstC8I GCNNGC 2 cut(s) 114, 258
BstDEI CTNAG 5 cut(s) 123, 211, 387, 435, 858
BstENI CCTNNNNNAGG 1 cut(s) 1065
BstKTI GATC 8 cut(s) 43, 121, 217, 302, 349, 488, 867, 1042
BstMAI GTCTC 4 cut(s) 103, 330, 706, 726
BstMBI GATC 8 cut(s) 40, 118, 214, 299, 346, 485, 864, 1039
BstMWI GCNNNNNNNGC 1 cut(s) 1210
BstNI CCWGG 3 cut(s) 503, 1044, 1050
BstNSI RCATGY 1 cut(s) 260
BstSCI CCNGG 7 cut(s) 62, 230, 340, 501, 1042, 1048, 1118
BstSFI CTRYAG 3 cut(s) 194, 738, 750
BstV1I GCAGC 5 cut(s) 234, 237, 648, 752, 1141
BstV2I GAAGAC 1 cut(s) 933
BstX2I RGATCY 3 cut(s) 40, 214, 1039
BstYI RGATCY 3 cut(s) 40, 214, 1039
Bsu36I CCTNAGG 1 cut(s) 123
BsuRI GGCC 3 cut(s) 598, 970, 1047
BtgZI GCGATG 1 cut(s) 1155
BtrI CACGTC 1 cut(s) 1135
BveI ACCTGC 1 cut(s) 367
Cac8I GCNNGC 2 cut(s) 114, 258
CaiI CAGNNNCTG 3 cut(s) 683, 857, 1049
Cfr13I GGNCC 4 cut(s) 596, 913, 969, 1046
CseI GACGC 1 cut(s) 137
Csp6I GTAC 3 cut(s) 139, 1022, 1227
CspCI CAANNNNNGTGG 2 cut(s) 592, 627
CviAII CATG 3 cut(s) 257, 513, 519
CviQI GTAC 3 cut(s) 139, 1022, 1227
DdeI CTNAG 5 cut(s) 123, 211, 387, 435, 858
DpnI GATC 8 cut(s) 42, 120, 216, 301, 348, 487, 866, 1041
DpnII GATC 8 cut(s) 40, 118, 214, 299, 346, 485, 864, 1039
DrdI GACNNNNNNGTC 1 cut(s) 397
DseDI GACNNNNNNGTC 1 cut(s) 397
Ecl136II GAGCTC 2 cut(s) 112, 617
Eco130I CCWWGG 2 cut(s) 132, 424
Eco24I GRGCYC 2 cut(s) 114, 619
Eco31I GGTCTC 2 cut(s) 103, 330
Eco32I GATATC 1 cut(s) 87
Eco47I GGWCC 1 cut(s) 913
Eco53kI GAGCTC 2 cut(s) 112, 617
Eco57I CTGAAG 3 cut(s) 647, 705, 960
Eco81I CCTNAGG 1 cut(s) 123
Eco88I CYCGRG 1 cut(s) 972
EcoICRI GAGCTC 2 cut(s) 112, 617
EcoNI CCTNNNNNAGG 1 cut(s) 1065
EcoO109I RGGNCCY 4 cut(s) 596, 913, 969, 1046
EcoRII CCWGG 3 cut(s) 501, 1042, 1048
EcoRV GATATC 1 cut(s) 87
EcoT14I CCWWGG 2 cut(s) 132, 424
EcoT38I GRGCYC 2 cut(s) 114, 619
ErhI CCWWGG 2 cut(s) 132, 424
FaeI CATG 3 cut(s) 260, 516, 522
FatI CATG 3 cut(s) 256, 512, 518
FauI CCCGC 1 cut(s) 4
FbaI TGATCA 1 cut(s) 346
Fnu4HI GCNGC 6 cut(s) 9, 223, 226, 637, 741, 1130
FriOI GRGCYC 2 cut(s) 114, 619
Fsp4HI GCNGC 6 cut(s) 9, 223, 226, 637, 741, 1130
FspBI CTAG 1 cut(s) 333
GluI GCNGC 6 cut(s) 9, 223, 226, 637, 741, 1130
GsaI CCCAGC 1 cut(s) 453
GsuI CTGGAG 1 cut(s) 44
HaeIII GGCC 3 cut(s) 598, 970, 1047
HapII CCGG 5 cut(s) 49, 63, 231, 342, 1119
HgaI GACGC 1 cut(s) 137
Hin1I GRCGYC 1 cut(s) 129
Hin1II CATG 3 cut(s) 260, 516, 522
HindIII AAGCTT 2 cut(s) 699, 933
HinfI GANTC 4 cut(s) 398, 714, 734, 947
HpaII CCGG 5 cut(s) 49, 63, 231, 342, 1119
HphI GGTGA 1 cut(s) 356
Hpy166II GTNNAC 1 cut(s) 991
Hpy188I TCNGA 7 cut(s) 214, 324, 679, 828, 940, 952, 1001
Hpy188III TCNNGA 2 cut(s) 125, 1256
Hpy8I GTNNAC 1 cut(s) 991
Hpy99I CGWCG 1 cut(s) 534
HpyAV CCTTC 6 cut(s) 22, 278, 622, 626, 976, 1020
HpyCH4III ACNGT 3 cut(s) 107, 312, 754
HpyCH4IV ACGT 2 cut(s) 641, 1134
HpyCH4V TGCA 9 cut(s) 222, 256, 293, 470, 603, 707, 740, 851, 1129
HpyF10VI GCNNNNNNNGC 1 cut(s) 1210
HpyF3I CTNAG 5 cut(s) 123, 211, 387, 435, 858
HpySE526I ACGT 2 cut(s) 641, 1134
Hsp92I GRCGYC 1 cut(s) 129
Hsp92II CATG 3 cut(s) 260, 516, 522
Ksp22I TGATCA 1 cut(s) 346
Kzo9I GATC 8 cut(s) 40, 118, 214, 299, 346, 485, 864, 1039
LmnI GCTCC 1 cut(s) 614
Lsp1109I GCAGC 5 cut(s) 234, 237, 648, 752, 1141
LweI GCATC 2 cut(s) 670, 1005
MaeI CTAG 1 cut(s) 333
MaeII ACGT 2 cut(s) 641, 1134
MaeIII GTNAC 2 cut(s) 413, 770
MalI GATC 8 cut(s) 42, 120, 216, 301, 348, 487, 866, 1041
MbiI CCGCTC 1 cut(s) 862
MboI GATC 8 cut(s) 40, 118, 214, 299, 346, 485, 864, 1039
MboII GAAGA 5 cut(s) 64, 451, 454, 580, 938
MfeI CAATTG 1 cut(s) 550
MflI RGATCY 3 cut(s) 40, 214, 1039
MhlI GDGCHC 2 cut(s) 114, 619
MluCI AATT 5 cut(s) 550, 604, 783, 1145, 1172
MlyI GAGTC 3 cut(s) 407, 708, 728
MmeI TCCRAC 1 cut(s) 266
MroXI GAANNNNTTC 1 cut(s) 1251
MseI TTAA 4 cut(s) 267, 1017, 1148, 1267
MslI CAYNNNNRTG 2 cut(s) 261, 517
MspCI CTTAAG 1 cut(s) 1016
MspI CCGG 5 cut(s) 49, 63, 231, 342, 1119
MspR9I CCNGG 7 cut(s) 64, 232, 342, 503, 1044, 1050, 1120
MunI CAATTG 1 cut(s) 550
Mva1269I GAATGC 1 cut(s) 1253
MvaI CCWGG 3 cut(s) 503, 1044, 1050
MwoI GCNNNNNNNGC 1 cut(s) 1210
NciI CCSGG 4 cut(s) 64, 232, 342, 1120
NdeII GATC 8 cut(s) 40, 118, 214, 299, 346, 485, 864, 1039
NlaIII CATG 3 cut(s) 260, 516, 522
NlaIV GGNNCC 4 cut(s) 381, 597, 971, 1041
NmuCI GTSAC 1 cut(s) 770
NspI RCATGY 1 cut(s) 260
PaeI GCATGC 1 cut(s) 260
PctI GAATGC 1 cut(s) 1253
PdmI GAANNNNTTC 1 cut(s) 1251
PfeI GAWTC 1 cut(s) 947
PflMI CCANNNNNTGG 1 cut(s) 1049
PkrI GCNGC 6 cut(s) 10, 224, 227, 638, 742, 1131
PleI GAGTC 3 cut(s) 406, 708, 728
PpsI GAGTC 3 cut(s) 406, 708, 728
Ppu21I YACGTR 1 cut(s) 642
PpuMI RGGWCCY 1 cut(s) 913
Psp124BI GAGCTC 2 cut(s) 114, 619
Psp5II RGGWCCY 1 cut(s) 913
Psp6I CCWGG 3 cut(s) 501, 1042, 1048
PspFI CCCAGC 1 cut(s) 449
PspGI CCWGG 3 cut(s) 501, 1042, 1048
PspN4I GGNNCC 4 cut(s) 381, 597, 971, 1041
PspPI GGNCC 4 cut(s) 596, 913, 969, 1046
PspPPI RGGWCCY 1 cut(s) 913
PsrI GAACNNNNNNTAC 2 cut(s) 363, 395
PstI CTGCAG 1 cut(s) 742
PstNI CAGNNNCTG 3 cut(s) 683, 857, 1049
PsuI RGATCY 3 cut(s) 40, 214, 1039
RsaI GTAC 3 cut(s) 140, 1023, 1228
RsaNI GTAC 3 cut(s) 139, 1022, 1227
RseI CAYNNNNRTG 2 cut(s) 261, 517
SacI GAGCTC 2 cut(s) 114, 619
SaqAI TTAA 4 cut(s) 267, 1017, 1148, 1267
SatI GCNGC 6 cut(s) 9, 223, 226, 637, 741, 1130
Sau3AI GATC 8 cut(s) 40, 118, 214, 299, 346, 485, 864, 1039
Sau96I GGNCC 4 cut(s) 596, 913, 969, 1046
SchI GAGTC 3 cut(s) 407, 708, 728
ScrFI CCNGG 7 cut(s) 64, 232, 342, 503, 1044, 1050, 1120
SduI GDGCHC 2 cut(s) 114, 619
SfaNI GCATC 2 cut(s) 670, 1005
SfcI CTRYAG 3 cut(s) 194, 738, 750
SinI GGWCC 1 cut(s) 913
SmiMI CAYNNNNRTG 2 cut(s) 261, 517
SmlI CTYRAG 2 cut(s) 247, 1016
SmoI CTYRAG 2 cut(s) 247, 1016
SphI GCATGC 1 cut(s) 260
Sse9I AATT 5 cut(s) 550, 604, 783, 1145, 1172
SsiI CCGC 4 cut(s) 8, 11, 862, 994
SspI AATATT 1 cut(s) 963
SspMI CTAG 1 cut(s) 333
SstI GAGCTC 2 cut(s) 114, 619
StyD4I CCNGG 7 cut(s) 62, 230, 340, 501, 1042, 1048, 1118
StyI CCWWGG 2 cut(s) 132, 424
TaaI ACNGT 3 cut(s) 107, 312, 754
TaiI ACGT 2 cut(s) 644, 1137
TaqI TCGA 2 cut(s) 144, 1233
TaqII GACCGA 1 cut(s) 744
TasI AATT 5 cut(s) 550, 604, 783, 1145, 1172
TauI GCSGC 1 cut(s) 11
TfiI GAWTC 1 cut(s) 947
Tru1I TTAA 4 cut(s) 267, 1017, 1148, 1267
Tru9I TTAA 4 cut(s) 267, 1017, 1148, 1267
TseFI GTSAC 1 cut(s) 770
TseI GCWGC 5 cut(s) 222, 225, 636, 740, 1129
Tsp45I GTSAC 1 cut(s) 770
TspDTI ATGAA 4 cut(s) 297, 795, 939, 1158
Van91I CCANNNNNTGG 1 cut(s) 1049
Vha464I CTTAAG 1 cut(s) 1016
VpaK11BI GGWCC 1 cut(s) 913
XagI CCTNNNNNAGG 1 cut(s) 1065
XceI RCATGY 1 cut(s) 260
XmnI GAANNNNTTC 1 cut(s) 1251
XspI CTAG 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.