Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0007830

Physical Location & Seq

Genomic Coordinates Forward (+)

33552172 .. 33561400

Gene Structure 9229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1202300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGAGGTTGCTGAAGATATTGACTGTGAGAACAAAAGTCAGCAGCAGAAGAGGACGAGGAGGGTAGGATTGTTGTACGACGAGAGGATGTGTAAGCACTCCACACCCGACGGCGATCCTCATCCGGAAAACCCCAATCGAATTAAGGCAATCTGGAACAAGCTCCAATCAGCTGCCATTCCCCAGAGGTGTGTTGTTTTGGAAGCAAAAGAAGCAGAAGACAAGCATATCTTGTCAGTTCACACCAAAAAACATGTTGATCTGATTAGGAATATAAGCTCCAAACAGTTTAATTCACGGAGAAACCGGATTGCATCGAAATTCAATTCCATATATCTCAATGAAGGATCATCCGAAGCTGCCTACCTTGCTGCGGGCTCTGCCATAGAGGTGGCGGAAAGAGTTGCCAAAGGCGAACTGGATTCTGCCATGGCTATCATTAGGCCTCCAGGACATCATGCGGAACAAGACGAAGCTATGGGATTTTGTCTGTACAACAATGTAGCTATTGCAGCAAGTGTCCTTTTAAATGAAAAACCAGAACTGGGTATCAACAAAATTTTAATCGTTGATTGGGATGTGCATCATGGTAATGGTACTCAAAAGATGTTCTGGAAGGATCCTCGTGTTTTATTCTTCTCGGTTCATAGGCATGAGTTTGGAAGTTTTTATCCAGCTAATGGTGATGGCTTCTATACGATGATTGGAGAAGGACCTGGAGCAGGATACAACATTAATGTCCCCTGGGAAAATGGCCGGTGTGGGGACGCAGACTATTTTGCAGTTTGGGACCATATTTTGGTTCCTGTTGCCAAGGAGTTTAATCCCGACTTAATTATAGTCTCTGCAGGATTTGATGCAGCTGCTGGTGATCCTCTAGGGGGTTGTCGTGTCACGCCATATGGATACGCAGTTATGTTGAAAAAGTTGATGAGTTTTGCCAACGGAAAAATCGTGTTGGCTTTAGAAGGAGGATACAATCTCGAGTCTATTGCAAGTTCAACTCTTTCTTGTGTTGAAGTTCTGCTGGACGACAATCCTATTCATGGGTCTTCGGAGGCATACCCATTTGAGTCTACATGGCGTGTGATACAAGCGGTTCGCCGGAAACTAAGTGCTTTCTGGCCATCACTTGCAGATAAATTACCAGAGACGCTAACCAATCAAAAAACTCCTCCAGCTTCGTATATTGTGACCTCAAGCTCTGATTCTGAAGCGGAGGACAACGAAGATCCAAAAATCATATCTAAACATCTTGAGGATGTTCTTCAAGATGTTATAGAGCCCTTCTCGAAGTTGAAAGTTGACGGAAGTATTCAAGATCATGTGGCAAGTAATTCTTGCACCTGGAGGTCAGAGCTTTCAAAGGTCGATATTTGGTATGCCTCTTTCGGATCAAATCTGTGTTTGGAAAGATTTCTCTGCTATATTAAAGGTGGACAGATGGAAGGTATGAAAACGCCATTTCCTGGTTGTGCGGACAAAACTCCCCCAAAGGAGATTGTGTGGAAGACTTTCCCTCGTCGCTTGTTCTTTGGTCGTGAATCTACACATACATGGGGTCCTGGAGGGGTCGCTTTCCTTAATCCCGAAAGCAACATCCGGGATAAGGCTTATATGTGCCTGTATAGAATTACGCTTGAGCAGTTTAACGATGTATTGGTCCAGGAAAACGTTGTGAGTTTTCCTGTGAACTCTCCTTTGTTTGACTTGACTGGTTTAGACTCGGTCACTCGTGAGGAGCCTCATTCTCTACAGGTTCACCTAAAGGAGTGTTGGTACAGTAATGTTGTCTACTTGGGCAAGGAGCATGATATTCCGATACTAACAATGACGTGTACAAAATCAGAAATGGATGGCTACAAATCCGGAGAGTTTCCGTTGTGTGCTCCGGCCAAAAATTACGTCAACACAATAGCGAGGGGCTTGGTGGAAGGAAAACAACTCTCACAGGAGGCGGCTATGGCTTACTTACAAGAAGCTTCTGTTAAACCATTGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006338 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019538 GO:0022622 GO:0030154 GO:0030856 GO:0032501 GO:0032502 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051276 GO:0065007 GO:0071704 GO:0071840 GO:0090558 GO:0090627 GO:0098732 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko05034 ko05165 ko05203 map05034 map05165 map05203

Pfam Domains

Protein Families

Hist_deacetyl

Protein Analysis

668

Amino Acids

74.31

Weight (kDa)

5.63

Isoelectric Point (pI)

42.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hist_deacetyl	PF00850	41 - 341	4.2e-96	Histone deacetylase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007830)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61050 AT5G61060 AT5G61060
fragaria_vesca	FvH4_5g13910 FvH4_5g13910 FvH4_5g13910
malus_domestica	MD06G1202300.v1.1 MD14G1211400.v1.1
prunus_persica	Prupe.5G204500_v2.0.a1 Prupe.5G204500_v2.0.a1
pyrus_communis	pycom06g17830 pycom07g03000 pycom07g07960 pycom14g17500
rosa_chinensis	RchiOBHm_Chr7g0183031
rosa_laevigata	RLG00000005086
rosa_multiflora	Rmu_sc0000014.1_g000006
rosa_roxburghii	Rroxscaffold_3G00270830
rosa_rugosa	Rorug06G0451900
rosa_samantha	Rh7AG055400 Rh7BG054800 Rh7CG056100 Rh7DG054900
rosa_wichuraiana	Rw7G004500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	680, 799, 1469
AccI	GTMKAC	2 cut(s)	1076, 1794
AccIII	TCCGGA	2 cut(s)	124, 1868
AciI	CCGC	7 cut(s)	374, 395, 461, 1097, 1217, 1478, 1958
AclI	AACGTT	1 cut(s)	1674
AclWI	GGATC	7 cut(s)	110, 355, 614, 627, 866, 1226, 1402
AcoI	YGGCCR	3 cut(s)	754, 1124, 1893
AcsI	RAATTY	2 cut(s)	320, 558
AcuI	CTGAAG	2 cut(s)	33, 1233
AfaI	GTAC	5 cut(s)	77, 494, 598, 1781, 1840
AflIII	ACRYGT	2 cut(s)	253, 1835
AgsI	TTSAA	8 cut(s)	325, 922, 1002, 1019, 1271, 1300, 1319, 1365
AjiI	CACGTC	1 cut(s)	1836
AjnI	CCWGG	7 cut(s)	448, 715, 743, 1346, 1468, 1564, 1665
Alw21I	GWGCWC	1 cut(s)	1891
Alw26I	GTCTC	2 cut(s)	847, 1145
AlwI	GGATC	7 cut(s)	110, 355, 614, 627, 866, 1226, 1402
AlwNI	CAGNNNCTG	1 cut(s)	866
Ama87I	CYCGRG	1 cut(s)	983
Aor13HI	TCCGGA	2 cut(s)	124, 1868
AoxI	GGCC	4 cut(s)	443, 754, 1124, 1893
ApeKI	GCWGC	7 cut(s)	43, 173, 359, 371, 512, 860, 863
ApoI	RAATTY	2 cut(s)	320, 558
ArsI	GACNNNNNNTTYG	2 cut(s)	1890, 1922
AseI	ATTAAT	1 cut(s)	735
Asp700I	GAANNNNTTC	2 cut(s)	1416, 1514
AspS9I	GGNCC	4 cut(s)	713, 790, 1562, 1663
AsuC2I	CCSGG	1 cut(s)	1604
AsuHPI	GGTGA	3 cut(s)	695, 881, 1754
AvaI	CYCGRG	1 cut(s)	983
AvaII	GGWCC	4 cut(s)	713, 790, 1562, 1663
BalI	TGGCCA	1 cut(s)	1126
BamHI	GGATCC	1 cut(s)	619
BanII	GRGCYC	2 cut(s)	380, 1287
BauI	CACGAG	2 cut(s)	624, 1734
BbsI	GAAGAC	3 cut(s)	225, 1044, 1517
Bbv12I	GWGCWC	1 cut(s)	1891
BbvI	GCAGC	7 cut(s)	55, 160, 346, 358, 524, 850, 872
BccI	CCATC	4 cut(s)	680, 1135, 1438, 1850
BceAI	ACGGC	1 cut(s)	127
BcgI	CGANNNNNNTGC	2 cut(s)	974, 1008
BciT130I	CCWGG	7 cut(s)	450, 717, 745, 1348, 1470, 1566, 1667
BciVI	GTATCC	3 cut(s)	719, 899, 968
BcnI	CCSGG	1 cut(s)	1604
BcoDI	GTCTC	2 cut(s)	847, 1145
BfaI	CTAG	1 cut(s)	878
BfmI	CTRYAG	2 cut(s)	846, 1754
BfuI	GTATCC	3 cut(s)	719, 899, 968
BisI	GCNGC	8 cut(s)	44, 174, 360, 372, 513, 861, 864, 1959
BlsI	GCNGC	8 cut(s)	45, 175, 361, 373, 514, 862, 865, 1960
Bme1390I	CCNGG	8 cut(s)	450, 717, 745, 1348, 1470, 1566, 1604, 1667
Bme18I	GGWCC	4 cut(s)	713, 790, 1562, 1663
BmeT110I	CYCGRG	1 cut(s)	983
BmgBI	CACGTC	1 cut(s)	1836
BmgT120I	GGNCC	4 cut(s)	713, 790, 1562, 1663
BmiI	GGNNCC	5 cut(s)	621, 791, 804, 1563, 1743
BmrFI	CCNGG	8 cut(s)	450, 717, 745, 1348, 1470, 1566, 1604, 1667
BmrI	ACTGGG	1 cut(s)	554
BmsI	GCATC	3 cut(s)	323, 592, 847
BmuI	ACTGGG	1 cut(s)	554
BpiI	GAAGAC	3 cut(s)	225, 1044, 1517
BplI	GAGNNNNNCTC	2 cut(s)	1274, 1306
BpmI	CTGGAG	5 cut(s)	432, 738, 1161, 1369, 1587
BpuEI	CTTGAG	3 cut(s)	1183, 1277, 1661
BpuMI	CCSGG	1 cut(s)	1604
BsaBI	GATNNNNATC	2 cut(s)	120, 582
BsaJI	CCNNGG	4 cut(s)	429, 743, 744, 813
BsaWI	WCCGGW	3 cut(s)	124, 306, 1868
BsaXI	ACNNNNNCTCC	4 cut(s)	1490, 1520, 1763, 1793
Bse118I	RCCGGY	1 cut(s)	756
Bse1I	ACTGG	3 cut(s)	423, 549, 1720
Bse8I	GATNNNNATC	2 cut(s)	120, 582
BseAI	TCCGGA	2 cut(s)	124, 1868
BseBI	CCWGG	7 cut(s)	450, 717, 745, 1348, 1470, 1566, 1667
BseDI	CCNNGG	4 cut(s)	429, 743, 744, 813
BseGI	GGATG	7 cut(s)	93, 121, 350, 583, 1267, 1599, 1861
BseJI	GATNNNNATC	2 cut(s)	120, 582
BseNI	ACTGG	3 cut(s)	423, 549, 1720
BseRI	GAGGAG	3 cut(s)	73, 1164, 1754
BseXI	GCAGC	7 cut(s)	55, 160, 346, 358, 524, 850, 872
BshFI	GGCC	4 cut(s)	445, 756, 1126, 1895
BsiHKAI	GWGCWC	1 cut(s)	1891
BsiHKCI	CYCGRG	1 cut(s)	983
BsiSI	CCGG	7 cut(s)	125, 307, 757, 1105, 1603, 1869, 1892
BslFI	GGGAC	3 cut(s)	725, 779, 803
BsmAI	GTCTC	2 cut(s)	847, 1145
BsmBI	CGTCTC	1 cut(s)	1145
BsmFI	GGGAC	3 cut(s)	725, 779, 803
BsnI	GGCC	4 cut(s)	445, 756, 1126, 1895
BsoBI	CYCGRG	1 cut(s)	983
Bsp1286I	GDGCHC	3 cut(s)	380, 1287, 1891
Bsp13I	TCCGGA	2 cut(s)	124, 1868
Bsp1407I	TGTACA	2 cut(s)	492, 1838
Bsp143I	GATC	8 cut(s)	115, 259, 347, 619, 871, 1231, 1321, 1394
Bsp19I	CCATGG	1 cut(s)	429
BspACI	CCGC	7 cut(s)	374, 395, 461, 1097, 1217, 1478, 1958
BspANI	GGCC	4 cut(s)	445, 756, 1126, 1895
BspEI	TCCGGA	2 cut(s)	124, 1868
BspLI	GGNNCC	5 cut(s)	621, 791, 804, 1563, 1743
BspMAI	CTGCAG	1 cut(s)	850
BspPI	GGATC	7 cut(s)	110, 355, 614, 627, 866, 1226, 1402
BsrFI	RCCGGY	1 cut(s)	756
BsrGI	TGTACA	2 cut(s)	492, 1838
BsrI	ACTGG	3 cut(s)	423, 549, 1720
BssAI	RCCGGY	1 cut(s)	756
BssECI	CCNNGG	4 cut(s)	429, 743, 744, 813
BssMI	GATC	8 cut(s)	115, 259, 347, 619, 871, 1231, 1321, 1394
BssSI	CACGAG	2 cut(s)	624, 1734
BssT1I	CCWWGG	2 cut(s)	429, 813
Bst2BI	CACGAG	2 cut(s)	624, 1734
Bst2UI	CCWGG	7 cut(s)	450, 717, 745, 1348, 1470, 1566, 1667
Bst4CI	ACNGT	3 cut(s)	26, 288, 1784
Bst6I	CTCTTC	1 cut(s)	44
BstAUI	TGTACA	2 cut(s)	492, 1838
BstC8I	GCNNGC	1 cut(s)	376
BstDEI	CTNAG	1 cut(s)	1112
BstDSI	CCRYGG	1 cut(s)	429
BstENI	CCTNNNNNAGG	1 cut(s)	720
BstF5I	GGATG	7 cut(s)	93, 121, 350, 583, 1267, 1599, 1861
BstKTI	GATC	8 cut(s)	118, 262, 350, 622, 874, 1234, 1324, 1397
BstMAI	GTCTC	2 cut(s)	847, 1145
BstMBI	GATC	8 cut(s)	115, 259, 347, 619, 871, 1231, 1321, 1394
BstMWI	GCNNNNNNNGC	5 cut(s)	212, 368, 380, 512, 1964
BstNI	CCWGG	7 cut(s)	450, 717, 745, 1348, 1470, 1566, 1667
BstNSI	RCATGY	1 cut(s)	257
BstSCI	CCNGG	8 cut(s)	448, 715, 743, 1346, 1468, 1564, 1602, 1665
BstSFI	CTRYAG	2 cut(s)	846, 1754
BstV1I	GCAGC	7 cut(s)	55, 160, 346, 358, 524, 850, 872
BstV2I	GAAGAC	3 cut(s)	225, 1044, 1517
BstX2I	RGATCY	2 cut(s)	619, 1231
BstXI	CCANNNNNNTGG	1 cut(s)	391
BstYI	RGATCY	2 cut(s)	619, 1231
BsuI	GTATCC	3 cut(s)	719, 899, 968
BsuRI	GGCC	4 cut(s)	445, 756, 1126, 1895
BtgI	CCRYGG	1 cut(s)	429
BtrI	CACGTC	1 cut(s)	1836
BtsCI	GGATG	7 cut(s)	93, 121, 350, 583, 1267, 1599, 1861
Cac8I	GCNNGC	1 cut(s)	376
CaiI	CAGNNNCTG	1 cut(s)	866
Cfr10I	RCCGGY	1 cut(s)	756
Cfr13I	GGNCC	4 cut(s)	713, 790, 1562, 1663
CseI	GACGC	2 cut(s)	776, 1162
Csp6I	GTAC	5 cut(s)	76, 493, 597, 1780, 1839
CviQI	GTAC	5 cut(s)	76, 493, 597, 1780, 1839
DdeI	CTNAG	1 cut(s)	1112
DpnI	GATC	8 cut(s)	117, 261, 349, 621, 873, 1233, 1323, 1396
DpnII	GATC	8 cut(s)	115, 259, 347, 619, 871, 1231, 1321, 1394
DraI	TTTAAA	1 cut(s)	528
EaeI	YGGCCR	3 cut(s)	754, 1124, 1893
Eam1104I	CTCTTC	1 cut(s)	44
EarI	CTCTTC	1 cut(s)	44
EciI	GGCGGA	1 cut(s)	410
Eco130I	CCWWGG	2 cut(s)	429, 813
Eco147I	AGGCCT	1 cut(s)	445
Eco24I	GRGCYC	2 cut(s)	380, 1287
Eco47I	GGWCC	4 cut(s)	713, 790, 1562, 1663
Eco57I	CTGAAG	2 cut(s)	33, 1233
Eco88I	CYCGRG	1 cut(s)	983
EcoNI	CCTNNNNNAGG	1 cut(s)	720
EcoO109I	RGGNCCY	2 cut(s)	713, 1562
EcoRII	CCWGG	7 cut(s)	448, 715, 743, 1346, 1468, 1564, 1665
EcoT14I	CCWWGG	2 cut(s)	429, 813
EcoT38I	GRGCYC	2 cut(s)	380, 1287
ErhI	CCWWGG	2 cut(s)	429, 813
Esp3I	CGTCTC	1 cut(s)	1145
FalI	AAGNNNNNCTT	4 cut(s)	215, 247, 1324, 1356
FaqI	GGGAC	3 cut(s)	725, 779, 803
FauI	CCCGC	1 cut(s)	367
FauNDI	CATATG	1 cut(s)	901
FblI	GTMKAC	2 cut(s)	1076, 1794
Fnu4HI	GCNGC	8 cut(s)	44, 174, 360, 372, 513, 861, 864, 1959
FokI	GGATG	7 cut(s)	100, 108, 337, 590, 1274, 1586, 1868
FriOI	GRGCYC	2 cut(s)	380, 1287
Fsp4HI	GCNGC	8 cut(s)	44, 174, 360, 372, 513, 861, 864, 1959
FspBI	CTAG	1 cut(s)	878
GluI	GCNGC	8 cut(s)	44, 174, 360, 372, 513, 861, 864, 1959
GsuI	CTGGAG	5 cut(s)	432, 738, 1161, 1369, 1587
HaeIII	GGCC	4 cut(s)	445, 756, 1126, 1895
HapII	CCGG	7 cut(s)	125, 307, 757, 1105, 1603, 1869, 1892
HgaI	GACGC	2 cut(s)	776, 1162
HincII	GTYRAC	2 cut(s)	1306, 1909
HindII	GTYRAC	2 cut(s)	1306, 1909
HindIII	AAGCTT	1 cut(s)	1980
HinfI	GANTC	6 cut(s)	422, 986, 1073, 1208, 1544, 1724
HpaII	CCGG	7 cut(s)	125, 307, 757, 1105, 1603, 1869, 1892
HphI	GGTGA	3 cut(s)	695, 881, 1754
Hpy166II	GTNNAC	9 cut(s)	241, 1077, 1306, 1439, 1693, 1762, 1795, 1839, 1909
Hpy188I	TCNGA	9 cut(s)	264, 355, 1057, 1207, 1213, 1357, 1394, 1821, 1849
Hpy8I	GTNNAC	9 cut(s)	241, 1077, 1306, 1439, 1693, 1762, 1795, 1839, 1909
Hpy99I	CGWCG	3 cut(s)	83, 113, 1527
HpyAV	CCTTC	7 cut(s)	338, 610, 704, 962, 1297, 1442, 1928
HpyCH4III	ACNGT	3 cut(s)	26, 288, 1784
HpyCH4IV	ACGT	3 cut(s)	1674, 1835, 1905
HpyCH4V	TGCA	9 cut(s)	314, 512, 583, 782, 848, 860, 995, 1136, 1344
HpyF10VI	GCNNNNNNNGC	5 cut(s)	212, 368, 380, 512, 1964
HpyF3I	CTNAG	1 cut(s)	1112
HpySE526I	ACGT	3 cut(s)	1674, 1835, 1905
Kpn2I	TCCGGA	2 cut(s)	124, 1868
Kzo9I	GATC	8 cut(s)	115, 259, 347, 619, 871, 1231, 1321, 1394
LmnI	GCTCC	6 cut(s)	168, 284, 719, 1741, 1807, 1894
Lsp1109I	GCAGC	7 cut(s)	55, 160, 346, 358, 524, 850, 872
LweI	GCATC	3 cut(s)	323, 592, 847
MaeI	CTAG	1 cut(s)	878
MaeII	ACGT	3 cut(s)	1674, 1835, 1905
MaeIII	GTNAC	3 cut(s)	892, 1192, 1729
MalI	GATC	8 cut(s)	117, 261, 349, 621, 873, 1233, 1323, 1396
MboI	GATC	8 cut(s)	115, 259, 347, 619, 871, 1231, 1321, 1394
MboII	GAAGA	8 cut(s)	26, 61, 230, 628, 1044, 1241, 1259, 1522
MflI	RGATCY	2 cut(s)	619, 1231
MhlI	GDGCHC	3 cut(s)	380, 1287, 1891
MlsI	TGGCCA	1 cut(s)	1126
MluNI	TGGCCA	1 cut(s)	1126
MlyI	GAGTC	3 cut(s)	995, 1082, 1718
Mox20I	TGGCCA	1 cut(s)	1126
MroI	TCCGGA	2 cut(s)	124, 1868
MroXI	GAANNNNTTC	2 cut(s)	1416, 1514
MscI	TGGCCA	1 cut(s)	1126
MslI	CAYNNNNRTG	5 cut(s)	389, 591, 651, 1555, 1999
Msp20I	TGGCCA	1 cut(s)	1126
MspA1I	CMGCKG	2 cut(s)	173, 863
MspI	CCGG	7 cut(s)	125, 307, 757, 1105, 1603, 1869, 1892
MspR9I	CCNGG	8 cut(s)	450, 717, 745, 1348, 1470, 1566, 1604, 1667
MvaI	CCWGG	7 cut(s)	450, 717, 745, 1348, 1470, 1566, 1667
MwoI	GCNNNNNNNGC	5 cut(s)	212, 368, 380, 512, 1964
NciI	CCSGG	1 cut(s)	1604
NcoI	CCATGG	1 cut(s)	429
NdeI	CATATG	1 cut(s)	901
NdeII	GATC	8 cut(s)	115, 259, 347, 619, 871, 1231, 1321, 1394
NlaIV	GGNNCC	5 cut(s)	621, 791, 804, 1563, 1743
NmuCI	GTSAC	3 cut(s)	892, 1192, 1729
NspI	RCATGY	1 cut(s)	257
PaeR7I	CTCGAG	1 cut(s)	983
PasI	CCCWGGG	1 cut(s)	744
PceI	AGGCCT	1 cut(s)	445
PciI	ACATGT	1 cut(s)	253
PcsI	WCGNNNNNNNCGW	1 cut(s)	951
PdmI	GAANNNNTTC	2 cut(s)	1416, 1514
PfeI	GAWTC	3 cut(s)	422, 1208, 1544
PflFI	GACNNNGTC	1 cut(s)	1727
PflMI	CCANNNNNTGG	3 cut(s)	680, 799, 1469
PfoI	TCCNGGA	4 cut(s)	448, 1564, 1602, 1665
PkrI	GCNGC	8 cut(s)	45, 175, 361, 373, 514, 862, 865, 1960
PleI	GAGTC	3 cut(s)	994, 1081, 1718
PpsI	GAGTC	3 cut(s)	994, 1081, 1718
PpuMI	RGGWCCY	2 cut(s)	713, 1562
PscI	ACATGT	1 cut(s)	253
PshBI	ATTAAT	1 cut(s)	735
Psp1406I	AACGTT	1 cut(s)	1674
Psp5II	RGGWCCY	2 cut(s)	713, 1562
Psp6I	CCWGG	7 cut(s)	448, 715, 743, 1346, 1468, 1564, 1665
PspGI	CCWGG	7 cut(s)	448, 715, 743, 1346, 1468, 1564, 1665
PspN4I	GGNNCC	5 cut(s)	621, 791, 804, 1563, 1743
PspPI	GGNCC	4 cut(s)	713, 790, 1562, 1663
PspPPI	RGGWCCY	2 cut(s)	713, 1562
PstI	CTGCAG	1 cut(s)	850
PstNI	CAGNNNCTG	1 cut(s)	866
PsuI	RGATCY	2 cut(s)	619, 1231
PsyI	GACNNNGTC	1 cut(s)	1727
PvuII	CAGCTG	2 cut(s)	173, 863
RsaI	GTAC	5 cut(s)	77, 494, 598, 1781, 1840
RsaNI	GTAC	5 cut(s)	76, 493, 597, 1780, 1839
RseI	CAYNNNNRTG	5 cut(s)	389, 591, 651, 1555, 1999
SatI	GCNGC	8 cut(s)	44, 174, 360, 372, 513, 861, 864, 1959
Sau3AI	GATC	8 cut(s)	115, 259, 347, 619, 871, 1231, 1321, 1394
Sau96I	GGNCC	4 cut(s)	713, 790, 1562, 1663
SchI	GAGTC	3 cut(s)	995, 1082, 1718
ScrFI	CCNGG	8 cut(s)	450, 717, 745, 1348, 1470, 1566, 1604, 1667
SduI	GDGCHC	3 cut(s)	380, 1287, 1891
SfaNI	GCATC	3 cut(s)	323, 592, 847
SfcI	CTRYAG	2 cut(s)	846, 1754
Sfr274I	CTCGAG	1 cut(s)	983
SinI	GGWCC	4 cut(s)	713, 790, 1562, 1663
SlaI	CTCGAG	1 cut(s)	983
SmiMI	CAYNNNNRTG	5 cut(s)	389, 591, 651, 1555, 1999
SmlI	CTYRAG	4 cut(s)	983, 1198, 1256, 1640
SmoI	CTYRAG	4 cut(s)	983, 1198, 1256, 1640
SseBI	AGGCCT	1 cut(s)	445
SsiI	CCGC	7 cut(s)	374, 395, 461, 1097, 1217, 1478, 1958
SspMI	CTAG	1 cut(s)	878
StuI	AGGCCT	1 cut(s)	445
StyD4I	CCNGG	8 cut(s)	448, 715, 743, 1346, 1468, 1564, 1602, 1665
StyI	CCWWGG	2 cut(s)	429, 813
TaaI	ACNGT	3 cut(s)	26, 288, 1784
TaiI	ACGT	3 cut(s)	1677, 1838, 1908
TaqI	TCGA	5 cut(s)	139, 317, 984, 1292, 1371
TaqII	GACCGA	1 cut(s)	1717
TatI	WGTACW	2 cut(s)	492, 1838
TauI	GCSGC	1 cut(s)	1961
TfiI	GAWTC	3 cut(s)	422, 1208, 1544
TseFI	GTSAC	3 cut(s)	892, 1192, 1729
TseI	GCWGC	7 cut(s)	43, 173, 359, 371, 512, 860, 863
Tsp45I	GTSAC	3 cut(s)	892, 1192, 1729
TspDTI	ATGAA	5 cut(s)	357, 546, 635, 1034, 1469
TspGWI	ACGGA	4 cut(s)	313, 960, 1323, 1869
Tth111I	GACNNNGTC	1 cut(s)	1727
Van91I	CCANNNNNTGG	3 cut(s)	680, 799, 1469
VpaK11BI	GGWCC	4 cut(s)	713, 790, 1562, 1663
VspI	ATTAAT	1 cut(s)	735
XagI	CCTNNNNNAGG	1 cut(s)	720
XapI	RAATTY	2 cut(s)	320, 558
XceI	RCATGY	1 cut(s)	257
XcmI	CCANNNNNNNNNTGG	1 cut(s)	415
XhoI	CTCGAG	1 cut(s)	983
XmiI	GTMKAC	2 cut(s)	1076, 1794
XmnI	GAANNNNTTC	2 cut(s)	1416, 1514
XspI	CTAG	1 cut(s)	878

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.