histone deacetylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G61050 AT5G61060 AT5G61060 |
| fragaria_vesca | FvH4_5g13910 FvH4_5g13910 FvH4_5g13910 |
| malus_domestica | MD06G1202300.v1.1 MD14G1211400.v1.1 |
| prunus_persica | Prupe.5G204500_v2.0.a1 Prupe.5G204500_v2.0.a1 |
| pyrus_communis | pycom06g17830 pycom07g03000 pycom07g07960 pycom14g17500 |
| rosa_chinensis | RchiOBHm_Chr7g0183031 |
| rosa_laevigata | RLG00000005086 |
| rosa_multiflora | Rmu_sc0000014.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00270830 |
| rosa_rugosa | Rorug06G0451900 |
| rosa_samantha | Rh7AG055400 Rh7BG054800 Rh7CG056100 Rh7DG054900 |
| rosa_wichuraiana | Rw7G004500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 293 |
| AciI | CCGC | 1 cut(s) | 314 |
| AclWI | GGATC | 1 cut(s) | 83 |
| AcuI | CTGAAG | 1 cut(s) | 255 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 98, 263 |
| AgsI | TTSAA | 4 cut(s) | 74, 139, 219, 236 |
| AluBI | AGCT | 1 cut(s) | 80 |
| AluI | AGCT | 1 cut(s) | 80 |
| Alw26I | GTCTC | 1 cut(s) | 52 |
| AlwI | GGATC | 1 cut(s) | 83 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 83 |
| ApeKI | GCWGC | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 1 cut(s) | 98 |
| BbsI | GAAGAC | 1 cut(s) | 261 |
| BbvI | GCAGC | 1 cut(s) | 67 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 191, 225 |
| BciVI | GTATCC | 2 cut(s) | 116, 185 |
| BcoDI | GTCTC | 1 cut(s) | 52 |
| BfmI | CTRYAG | 2 cut(s) | 51, 93 |
| BfuI | GTATCC | 2 cut(s) | 116, 185 |
| BisI | GCNGC | 1 cut(s) | 81 |
| BlsI | GCNGC | 1 cut(s) | 82 |
| BmsI | GCATC | 1 cut(s) | 52 |
| BpiI | GAAGAC | 1 cut(s) | 261 |
| BsaI | GGTCTC | 1 cut(s) | 52 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 98, 263 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 98, 263 |
| BseXI | GCAGC | 1 cut(s) | 67 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 98, 263 |
| BsmAI | GTCTC | 1 cut(s) | 52 |
| Bso31I | GGTCTC | 1 cut(s) | 52 |
| Bsp143I | GATC | 1 cut(s) | 88 |
| BspACI | CCGC | 1 cut(s) | 314 |
| BspMAI | CTGCAG | 1 cut(s) | 55 |
| BspPI | GGATC | 1 cut(s) | 83 |
| BspTNI | GGTCTC | 1 cut(s) | 52 |
| BssMI | GATC | 1 cut(s) | 88 |
| BstKTI | GATC | 1 cut(s) | 91 |
| BstMAI | GTCTC | 1 cut(s) | 52 |
| BstMBI | GATC | 1 cut(s) | 88 |
| BstSFI | CTRYAG | 2 cut(s) | 51, 93 |
| BstV1I | GCAGC | 1 cut(s) | 67 |
| BstV2I | GAAGAC | 1 cut(s) | 261 |
| BsuI | GTATCC | 2 cut(s) | 116, 185 |
| CaiI | CAGNNNCTG | 1 cut(s) | 83 |
| CviAII | CATG | 2 cut(s) | 263, 297 |
| CviJI | RGCY | 2 cut(s) | 80, 179 |
| CviKI_1 | RGCY | 2 cut(s) | 80, 179 |
| DpnI | GATC | 1 cut(s) | 90 |
| DpnII | GATC | 1 cut(s) | 88 |
| Eco31I | GGTCTC | 1 cut(s) | 52 |
| Eco57I | CTGAAG | 1 cut(s) | 255 |
| FaeI | CATG | 2 cut(s) | 266, 300 |
| FaiI | YATR | 8 cut(s) | 44, 118, 120, 134, 264, 280, 298, 319 |
| FatI | CATG | 2 cut(s) | 262, 296 |
| FauNDI | CATATG | 1 cut(s) | 118 |
| FblI | GTMKAC | 1 cut(s) | 293 |
| Fnu4HI | GCNGC | 1 cut(s) | 81 |
| Fsp4HI | GCNGC | 1 cut(s) | 81 |
| GluI | GCNGC | 1 cut(s) | 81 |
| Hin1II | CATG | 2 cut(s) | 266, 300 |
| HinfI | GANTC | 2 cut(s) | 203, 290 |
| HphI | GGTGA | 1 cut(s) | 98 |
| Hpy166II | GTNNAC | 1 cut(s) | 294 |
| Hpy188I | TCNGA | 1 cut(s) | 274 |
| Hpy188III | TCNNGA | 2 cut(s) | 32, 200 |
| Hpy8I | GTNNAC | 1 cut(s) | 294 |
| HpyAV | CCTTC | 1 cut(s) | 179 |
| HpyCH4V | TGCA | 3 cut(s) | 53, 65, 212 |
| Hsp92II | CATG | 2 cut(s) | 266, 300 |
| Kzo9I | GATC | 1 cut(s) | 88 |
| LpnPI | CCDG | 7 cut(s) | 5, 39, 45, 69, 105, 120, 230 |
| Lsp1109I | GCAGC | 1 cut(s) | 67 |
| LweI | GCATC | 1 cut(s) | 52 |
| MaeIII | GTNAC | 1 cut(s) | 109 |
| MalI | GATC | 1 cut(s) | 90 |
| MboI | GATC | 1 cut(s) | 88 |
| MboII | GAAGA | 1 cut(s) | 261 |
| MluCI | AATT | 1 cut(s) | 39 |
| MlyI | GAGTC | 1 cut(s) | 299 |
| MnlI | CCTC | 2 cut(s) | 182, 268 |
| MseI | TTAA | 3 cut(s) | 27, 38, 322 |
| MspA1I | CMGCKG | 1 cut(s) | 80 |
| NdeI | CATATG | 1 cut(s) | 118 |
| NdeII | GATC | 1 cut(s) | 88 |
| NlaIII | CATG | 2 cut(s) | 266, 300 |
| NmuCI | GTSAC | 1 cut(s) | 109 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 168 |
| PfeI | GAWTC | 1 cut(s) | 203 |
| PkrI | GCNGC | 1 cut(s) | 82 |
| PleI | GAGTC | 1 cut(s) | 298 |
| PpsI | GAGTC | 1 cut(s) | 298 |
| PstI | CTGCAG | 1 cut(s) | 55 |
| PstNI | CAGNNNCTG | 1 cut(s) | 83 |
| PvuII | CAGCTG | 1 cut(s) | 80 |
| SaqAI | TTAA | 3 cut(s) | 27, 38, 322 |
| SatI | GCNGC | 1 cut(s) | 81 |
| Sau3AI | GATC | 1 cut(s) | 88 |
| SchI | GAGTC | 1 cut(s) | 299 |
| SetI | ASST | 2 cut(s) | 24, 82 |
| SfaNI | GCATC | 1 cut(s) | 52 |
| SfcI | CTRYAG | 2 cut(s) | 51, 93 |
| Sse9I | AATT | 1 cut(s) | 39 |
| SsiI | CCGC | 1 cut(s) | 314 |
| TaqI | TCGA | 1 cut(s) | 201 |
| TasI | AATT | 1 cut(s) | 39 |
| TfiI | GAWTC | 1 cut(s) | 203 |
| Tru1I | TTAA | 3 cut(s) | 27, 38, 322 |
| Tru9I | TTAA | 3 cut(s) | 27, 38, 322 |
| TseFI | GTSAC | 1 cut(s) | 109 |
| TseI | GCWGC | 1 cut(s) | 80 |
| Tsp45I | GTSAC | 1 cut(s) | 109 |
| TspDTI | ATGAA | 1 cut(s) | 251 |
| TspGWI | ACGGA | 1 cut(s) | 177 |
| XmiI | GTMKAC | 1 cut(s) | 293 |