Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0007830

Physical Location & Seq

Genomic Coordinates Reverse (-)

63307956 .. 63312621

Gene Structure 4666 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00270830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGGAGGTTGGTGGTGGTGTTGACTCGAAGAGCAAAAGTCAACGGCGGGTAGGGTTGTTATACGACGAGAGGATGTGTAAGCACTCCACACCGGACGGTGATCCTCACCCGGAAAACCCTGACCGGATTAAGGTCATCTGGAACAAATTCCAAGCCAATTCCATTCCTCAGAGGTGTGTTCTTTTGGATGCCAAAGAAGCAGAAGACAAACATATCTTGGCAGTTCACTCCCAAAACCATGTTAATTTGGTTAAGAAGATAAGCTCCAAACAGTTTGATTCACGGAGAAATCGAATTGCATCAAGTTTGAATTCGATATATTTGAATGAAGGAACATCCGAAGCTGCCTATCTTGCTGCCGGCTCTGCCATAGAGGTAACCGAAAGAGTTGCAAAAGGAGAAGTGGATTCTGCTGTAGCTATTATTAGGCCTCCAGGACATCATGCCGAAGAAGATGAAGCTATGGGGTTTTGTCTTTTTAACAATGTTGCTATTGCAGCAAGTTATGTTTTAAATGAAAAGCCAGAATTGGGAATCAACAAAATACTGATCGTTGATTGGGATGTGCATCACGGTAATGCCACTCAAAAGATGTTCTGGAAGGATCCTCGTGTTTTATTCTTCTCAGTTCATAGGCATGAGTTTGGAAGCTTTTATCCAGCTACTGATGATGGTTTCTATACTATGGTTGGAGAAGGACCAGGAGCAGGATATAACATAAATGTCCCTTGGGAAAATGGTCGATGTGGAGATGCTGATTATTTTGCGGTTTGGGAGCATATCTTGCTTCCAGTTGCCAAAGAATTCAATCCTGACTTAATTATAGTCTCTGCTGGATTTGATGCAGCTATTGGTGATCCTTTGGGGGGTTGTCGGATCACACCATATGGCTATTCAGTTATGCTGAAGAAGTTGATGAATTTTGCCAATGGAAAGATTGTCTTGGCTTTAGAAGGAGGATATAATTTTGAGTCTATTGCAAAGTCAATGCTTGCTTGTGTTGAAGTTCTGCTAGAGGACAAACCTATTCTTGGATCTTCGGAGGCATACCCATTTGAGTCTACATGGCGTGTGATACAAGCGGTTCGCCAGAAATTAAGTGCTTACTGGCCGTCACTTGCAGATGAATTGCCAGAGGAGTTAATCAATCAAAAAGTGGCTCCAGCTGCGTATGTTCTGACCTCAAGCTCTGAATCTGAAGCGGAGGAGGATCACGAAAGTCCAAAAGTATCTCAACATCTTGAGGAAGCTCTTCAGGAGATTATAGAGCCCCTTTCAAAGCTGAAAGTTGATGAAAGTACTCGGGATCATGTGGCAAGCAACACTTACACATGGAGGTCGGAGCTTTCGAAAGTTGACATCTGGTATGCTGCGTTTGGATCAAATCTGTGGTTGAAAAGACTGCTTTGCTATATTGAAGGTGGACAGGTGGACGGTTTGCAAAAGTCATGTGTTGGTTCGGTGGATAAAACTCCACCGAAAGAGATCACGTGGAAGACTTTCCCTCGTCGCATGTTCTTTGGTCGCGAATCTTCTCTGTCATGGGGTCATGGAGGGGTTGCGTTCATGGACCCTGAAAGCAACAGTCAGGATAAAACTCACATGTGCCTGTATAGAATTACGCTCGAGCAGTTTAACGATTTGTTGGTGCAGGAAAATTATGGAGGCTATGCCATGAGCTCTCCTTTGTTTGACTTGACTGCTTTAAATTCAGTCACAGGTCAAGAACCTCATTCCCTGCAGGTTCGCCTAGAGAAGGGTTGGTACCGTAATGTTGTCTACTTGGGCAAGGAGCGTAACATTCCAATACTGACTATGACGTGCACACCATCGGACGTTGAAGGCTTCAAATCTGGCGAGCTTCCCTTGTGCGCTCCAGCCAAGAATTATGCCAACACAATAGTGAGAGGCTTGGTGGAAGGAAAGCAGCTTTCACAGGAGGAGGCAATGGCTTACATACAAGAAGCCGCTACTAAAGCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006338 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019538 GO:0022622 GO:0030154 GO:0030856 GO:0032501 GO:0032502 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051276 GO:0065007 GO:0071704 GO:0071840 GO:0090558 GO:0090627 GO:0098732 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko05034 ko05165 ko05203 map05034 map05165 map05203

Pfam Domains

Protein Families

Hist_deacetyl

Protein Analysis

661

Amino Acids

73.62

Weight (kDa)

5.36

Isoelectric Point (pI)

42.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hist_deacetyl	PF00850	36 - 337	3.7e-93	Histone deacetylase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007830)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61050 AT5G61060 AT5G61060
fragaria_vesca	FvH4_5g13910 FvH4_5g13910 FvH4_5g13910
malus_domestica	MD06G1202300.v1.1 MD14G1211400.v1.1
prunus_persica	Prupe.5G204500_v2.0.a1 Prupe.5G204500_v2.0.a1
pyrus_communis	pycom06g17830 pycom07g03000 pycom07g07960 pycom14g17500
rosa_chinensis	RchiOBHm_Chr7g0183031
rosa_laevigata	RLG00000005086
rosa_multiflora	Rmu_sc0000014.1_g000006
rosa_roxburghii	Rroxscaffold_3G00270830
rosa_rugosa	Rorug06G0451900
rosa_samantha	Rh7AG055400 Rh7BG054800 Rh7CG056100 Rh7DG054900
rosa_wichuraiana	Rw7G004500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1732
Acc65I	GGTACC	1 cut(s)	1764
AccB1I	GGYRCC	1 cut(s)	1764
AccI	GTMKAC	2 cut(s)	1061, 1779
AccII	CGCG	1 cut(s)	1527
AciI	CCGC	5 cut(s)	46, 767, 1082, 1202, 1968
AclWI	GGATC	9 cut(s)	95, 599, 612, 851, 884, 1042, 1218, 1314, 1387
AcoI	YGGCCR	1 cut(s)	1109
AcsI	RAATTY	5 cut(s)	146, 310, 803, 919, 1708
AcuI	CTGAAG	3 cut(s)	926, 1218, 1238
AcvI	CACGTG	1 cut(s)	1491
AfaI	GTAC	2 cut(s)	1300, 1766
AfiI	CCNNNNNNNGG	6 cut(s)	130, 530, 707, 866, 1031, 1756
AflIII	ACRYGT	1 cut(s)	1602
AgsI	TTSAA	9 cut(s)	310, 325, 808, 1004, 1278, 1396, 1418, 1841, 1849
AjiI	CACGTC	1 cut(s)	1821
AjnI	CCWGG	2 cut(s)	433, 700
AleI	CACNNNNGTG	1 cut(s)	1901
Alw21I	GWGCWC	2 cut(s)	1682, 1826
Alw26I	GTCTC	1 cut(s)	832
Alw44I	GTGCAC	1 cut(s)	1822
AlwI	GGATC	9 cut(s)	95, 599, 612, 851, 884, 1042, 1218, 1314, 1387
AlwNI	CAGNNNCTG	1 cut(s)	665
Ama87I	CYCGRG	2 cut(s)	1302, 1625
AoxI	GGCC	2 cut(s)	428, 1109
ApaLI	GTGCAC	1 cut(s)	1822
ApeKI	GCWGC	7 cut(s)	344, 356, 497, 845, 1166, 1370, 1927
ApoI	RAATTY	5 cut(s)	146, 310, 803, 919, 1708
Asp700I	GAANNNNTTC	3 cut(s)	146, 1251, 1499
Asp718I	GGTACC	1 cut(s)	1764
AspLEI	GCGC	1 cut(s)	1874
AspS9I	GGNCC	2 cut(s)	698, 1570
AsuC2I	CCSGG	1 cut(s)	110
AsuHPI	GGTGA	3 cut(s)	98, 110, 866
AsuII	TTCGAA	1 cut(s)	1349
AvaI	CYCGRG	2 cut(s)	1302, 1625
AvaII	GGWCC	2 cut(s)	698, 1570
BaeGI	GKGCMC	1 cut(s)	1826
BamHI	GGATCC	1 cut(s)	604
BanI	GGYRCC	1 cut(s)	1764
BanII	GRGCYC	2 cut(s)	1272, 1682
BarI	GAAGNNNNNNTAC	2 cut(s)	1748, 1780
BauI	CACGAG	1 cut(s)	609
BbrPI	CACGTG	1 cut(s)	1491
BbsI	GAAGAC	2 cut(s)	210, 1502
Bbv12I	GWGCWC	2 cut(s)	1682, 1826
BbvI	GCAGC	7 cut(s)	331, 343, 509, 857, 1153, 1357, 1939
BccI	CCATC	2 cut(s)	665, 1837
BceAI	ACGGC	2 cut(s)	59, 1096
BcgI	CGANNNNNNTGC	2 cut(s)	371, 405
BciT130I	CCWGG	2 cut(s)	435, 702
BcnI	CCSGG	1 cut(s)	110
BcoDI	GTCTC	1 cut(s)	832
BfaI	CTAG	2 cut(s)	1013, 1751
BfmI	CTRYAG	2 cut(s)	414, 1739
BfuAI	ACCTGC	1 cut(s)	1732
BisI	GCNGC	8 cut(s)	345, 357, 498, 846, 1167, 1371, 1928, 1968
BlsI	GCNGC	8 cut(s)	346, 358, 499, 847, 1168, 1372, 1929, 1969
BmcAI	AGTACT	1 cut(s)	1300
Bme1390I	CCNGG	3 cut(s)	110, 435, 702
Bme18I	GGWCC	2 cut(s)	698, 1570
BmeT110I	CYCGRG	2 cut(s)	1302, 1625
BmgBI	CACGTC	1 cut(s)	1821
BmgT120I	GGNCC	2 cut(s)	698, 1570
BmiI	GGNNCC	4 cut(s)	606, 1161, 1572, 1766
BmrFI	CCNGG	3 cut(s)	110, 435, 702
BmsI	GCATC	5 cut(s)	178, 308, 577, 742, 832
BpiI	GAAGAC	2 cut(s)	210, 1502
BpmI	CTGGAG	3 cut(s)	417, 1146, 1860
Bpu14I	TTCGAA	1 cut(s)	1349
BpuEI	CTTGAG	2 cut(s)	1168, 1262
BpuMI	CCSGG	1 cut(s)	110
BsaAI	YACGTR	1 cut(s)	1491
BsaBI	GATNNNNATC	1 cut(s)	567
BsaJI	CCNNGG	1 cut(s)	728
BsaWI	WCCGGW	2 cut(s)	91, 123
Bsc4I	CCNNNNNNNGG	6 cut(s)	130, 530, 707, 866, 1031, 1756
Bse118I	RCCGGY	1 cut(s)	359
Bse1I	ACTGG	2 cut(s)	791, 1112
Bse3DI	GCAATG	1 cut(s)	1953
Bse8I	GATNNNNATC	1 cut(s)	567
BseBI	CCWGG	2 cut(s)	435, 702
BseDI	CCNNGG	1 cut(s)	728
BseGI	GGATG	4 cut(s)	78, 193, 335, 568
BseJI	GATNNNNATC	1 cut(s)	567
BseLI	CCNNNNNNNGG	6 cut(s)	130, 530, 707, 866, 1031, 1756
BseMI	GCAATG	1 cut(s)	1953
BseMII	CTCAG	2 cut(s)	182, 639
BseNI	ACTGG	2 cut(s)	791, 1112
BseRI	GAGGAG	3 cut(s)	1151, 1220, 1955
BseSI	GKGCMC	1 cut(s)	1826
BseXI	GCAGC	7 cut(s)	331, 343, 509, 857, 1153, 1357, 1939
BsgI	GTGCAG	1 cut(s)	1670
Bsh1236I	CGCG	1 cut(s)	1527
BshFI	GGCC	2 cut(s)	430, 1111
BshNI	GGYRCC	1 cut(s)	1764
BsiHKAI	GWGCWC	2 cut(s)	1682, 1826
BsiHKCI	CYCGRG	2 cut(s)	1302, 1625
BsiSI	CCGG	4 cut(s)	92, 110, 124, 360
BslFI	GGGAC	1 cut(s)	710
BslI	CCNNNNNNNGG	6 cut(s)	130, 530, 707, 866, 1031, 1756
BsmAI	GTCTC	1 cut(s)	832
BsmFI	GGGAC	1 cut(s)	710
BsnI	GGCC	2 cut(s)	430, 1111
BsoBI	CYCGRG	2 cut(s)	1302, 1625
Bsp119I	TTCGAA	1 cut(s)	1349
Bsp1286I	GDGCHC	3 cut(s)	1272, 1682, 1826
Bsp68I	TCGCGA	1 cut(s)	1527
BspACI	CCGC	5 cut(s)	46, 767, 1082, 1202, 1968
BspANI	GGCC	2 cut(s)	430, 1111
BspCNI	CTCAG	2 cut(s)	181, 638
BspFNI	CGCG	1 cut(s)	1527
BspLI	GGNNCC	4 cut(s)	606, 1161, 1572, 1766
BspMAI	CTGCAG	1 cut(s)	1743
BspMI	ACCTGC	1 cut(s)	1732
BspPI	GGATC	9 cut(s)	95, 599, 612, 851, 884, 1042, 1218, 1314, 1387
BspQI	GCTCTTC	2 cut(s)	23, 1257
BspT104I	TTCGAA	1 cut(s)	1349
BspT107I	GGYRCC	1 cut(s)	1764
BsrDI	GCAATG	1 cut(s)	1953
BsrFI	RCCGGY	1 cut(s)	359
BsrI	ACTGG	2 cut(s)	791, 1112
BssAI	RCCGGY	1 cut(s)	359
BssECI	CCNNGG	1 cut(s)	728
BssSI	CACGAG	1 cut(s)	609
BssT1I	CCWWGG	1 cut(s)	728
Bst2BI	CACGAG	1 cut(s)	609
Bst2UI	CCWGG	2 cut(s)	435, 702
Bst4CI	ACNGT	6 cut(s)	98, 273, 575, 1436, 1586, 1769
Bst6I	CTCTTC	2 cut(s)	23, 1257
BstAPI	GCANNNNNTGC	1 cut(s)	784
BstBAI	YACGTR	1 cut(s)	1491
BstBI	TTCGAA	1 cut(s)	1349
BstC8I	GCNNGC	4 cut(s)	361, 993, 1318, 1859
BstDEI	CTNAG	2 cut(s)	168, 625
BstEII	GGTNACC	1 cut(s)	376
BstENI	CCTNNNNNAGG	1 cut(s)	1754
BstF5I	GGATG	4 cut(s)	78, 193, 335, 568
BstFNI	CGCG	1 cut(s)	1527
BstHHI	GCGC	1 cut(s)	1874
BstMAI	GTCTC	1 cut(s)	832
BstMWI	GCNNNNNNNGC	7 cut(s)	197, 353, 365, 497, 784, 1166, 1976
BstNI	CCWGG	2 cut(s)	435, 702
BstNSI	RCATGY	2 cut(s)	1516, 1606
BstPI	GGTNACC	1 cut(s)	376
BstSCI	CCNGG	3 cut(s)	108, 433, 700
BstSFI	CTRYAG	2 cut(s)	414, 1739
BstSLI	GKGCMC	1 cut(s)	1826
BstUI	CGCG	1 cut(s)	1527
BstV1I	GCAGC	7 cut(s)	331, 343, 509, 857, 1153, 1357, 1939
BstV2I	GAAGAC	2 cut(s)	210, 1502
BstX2I	RGATCY	2 cut(s)	604, 1034
BstYI	RGATCY	2 cut(s)	604, 1034
BsuRI	GGCC	2 cut(s)	430, 1111
BtrI	CACGTC	1 cut(s)	1821
BtsCI	GGATG	4 cut(s)	78, 193, 335, 568
BtuMI	TCGCGA	1 cut(s)	1527
BveI	ACCTGC	1 cut(s)	1732
Cac8I	GCNNGC	4 cut(s)	361, 993, 1318, 1859
CaiI	CAGNNNCTG	1 cut(s)	665
CfoI	GCGC	1 cut(s)	1874
Cfr10I	RCCGGY	1 cut(s)	359
Cfr13I	GGNCC	2 cut(s)	698, 1570
Csp6I	GTAC	2 cut(s)	1299, 1765
CviQI	GTAC	2 cut(s)	1299, 1765
DdeI	CTNAG	2 cut(s)	168, 625
DraI	TTTAAA	2 cut(s)	513, 1707
EaeI	YGGCCR	1 cut(s)	1109
Eam1104I	CTCTTC	2 cut(s)	23, 1257
EarI	CTCTTC	2 cut(s)	23, 1257
Ecl136II	GAGCTC	1 cut(s)	1680
Eco130I	CCWWGG	1 cut(s)	728
Eco147I	AGGCCT	1 cut(s)	430
Eco24I	GRGCYC	2 cut(s)	1272, 1682
Eco47I	GGWCC	2 cut(s)	698, 1570
Eco53kI	GAGCTC	1 cut(s)	1680
Eco57I	CTGAAG	3 cut(s)	926, 1218, 1238
Eco72I	CACGTG	1 cut(s)	1491
Eco88I	CYCGRG	2 cut(s)	1302, 1625
Eco91I	GGTNACC	1 cut(s)	376
EcoICRI	GAGCTC	1 cut(s)	1680
EcoNI	CCTNNNNNAGG	1 cut(s)	1754
EcoO65I	GGTNACC	1 cut(s)	376
EcoRI	GAATTC	2 cut(s)	310, 803
EcoRII	CCWGG	2 cut(s)	433, 700
EcoT14I	CCWWGG	1 cut(s)	728
EcoT38I	GRGCYC	2 cut(s)	1272, 1682
ErhI	CCWWGG	1 cut(s)	728
FalI	AAGNNNNNCTT	4 cut(s)	926, 958, 1309, 1341
FaqI	GGGAC	1 cut(s)	710
FauI	CCCGC	1 cut(s)	39
FauNDI	CATATG	1 cut(s)	886
FblI	GTMKAC	2 cut(s)	1061, 1779
Fnu4HI	GCNGC	8 cut(s)	345, 357, 498, 846, 1167, 1371, 1928, 1968
FokI	GGATG	4 cut(s)	85, 200, 322, 575
FriOI	GRGCYC	2 cut(s)	1272, 1682
Fsp4HI	GCNGC	8 cut(s)	345, 357, 498, 846, 1167, 1371, 1928, 1968
FspBI	CTAG	2 cut(s)	1013, 1751
GlaI	GCGC	1 cut(s)	1873
GluI	GCNGC	8 cut(s)	345, 357, 498, 846, 1167, 1371, 1928, 1968
GsuI	CTGGAG	3 cut(s)	417, 1146, 1860
HaeIII	GGCC	2 cut(s)	430, 1111
HapII	CCGG	4 cut(s)	92, 110, 124, 360
HhaI	GCGC	1 cut(s)	1874
Hin6I	GCGC	1 cut(s)	1872
HinP1I	GCGC	1 cut(s)	1872
HincII	GTYRAC	3 cut(s)	22, 41, 1357
HindII	GTYRAC	3 cut(s)	22, 41, 1357
HindIII	AAGCTT	1 cut(s)	649
HinfI	GANTC	8 cut(s)	23, 278, 407, 534, 971, 1058, 1193, 1529
HpaII	CCGG	4 cut(s)	92, 110, 124, 360
HphI	GGTGA	3 cut(s)	98, 110, 866
Hpy166II	GTNNAC	9 cut(s)	22, 41, 226, 1062, 1357, 1424, 1432, 1780, 1824
Hpy188I	TCNGA	9 cut(s)	171, 340, 876, 1042, 1179, 1192, 1198, 1342, 1834
Hpy8I	GTNNAC	9 cut(s)	22, 41, 226, 1062, 1357, 1424, 1432, 1780, 1824
Hpy99I	CGWCG	2 cut(s)	68, 1512
HpyAV	CCTTC	8 cut(s)	323, 595, 689, 947, 1412, 1750, 1835, 1913
HpyCH4III	ACNGT	6 cut(s)	98, 273, 575, 1436, 1586, 1769
HpyCH4IV	ACGT	3 cut(s)	1490, 1820, 1836
HpyF10VI	GCNNNNNNNGC	7 cut(s)	197, 353, 365, 497, 784, 1166, 1976
HpyF3I	CTNAG	2 cut(s)	168, 625
HpySE526I	ACGT	3 cut(s)	1490, 1820, 1836
HspAI	GCGC	1 cut(s)	1872
KpnI	GGTACC	1 cut(s)	1768
KroI	GCCGGC	1 cut(s)	359
KroNI	GCCGGC	1 cut(s)	361
LguI	GCTCTTC	2 cut(s)	23, 1257
LmnI	GCTCC	7 cut(s)	269, 704, 775, 1165, 1342, 1792, 1879
Lsp1109I	GCAGC	7 cut(s)	331, 343, 509, 857, 1153, 1357, 1939
LweI	GCATC	5 cut(s)	178, 308, 577, 742, 832
MaeI	CTAG	2 cut(s)	1013, 1751
MaeII	ACGT	3 cut(s)	1490, 1820, 1836
MaeIII	GTNAC	4 cut(s)	376, 1113, 1714, 1796
MflI	RGATCY	2 cut(s)	604, 1034
MhlI	GDGCHC	3 cut(s)	1272, 1682, 1826
MlyI	GAGTC	3 cut(s)	17, 980, 1067
MmeI	TCCRAC	3 cut(s)	670, 854, 1320
MroNI	GCCGGC	1 cut(s)	359
MroXI	GAANNNNTTC	3 cut(s)	146, 1251, 1499
MslI	CAYNNNNRTG	3 cut(s)	576, 636, 1901
MspA1I	CMGCKG	1 cut(s)	1166
MspI	CCGG	4 cut(s)	92, 110, 124, 360
MspR9I	CCNGG	3 cut(s)	110, 435, 702
MvaI	CCWGG	2 cut(s)	435, 702
MvnI	CGCG	1 cut(s)	1527
MwoI	GCNNNNNNNGC	7 cut(s)	197, 353, 365, 497, 784, 1166, 1976
NaeI	GCCGGC	1 cut(s)	361
NciI	CCSGG	1 cut(s)	110
NdeI	CATATG	1 cut(s)	886
NgoMIV	GCCGGC	1 cut(s)	359
NlaIV	GGNNCC	4 cut(s)	606, 1161, 1572, 1766
NmuCI	GTSAC	2 cut(s)	1113, 1714
NruI	TCGCGA	1 cut(s)	1527
NspI	RCATGY	2 cut(s)	1516, 1606
NspV	TTCGAA	1 cut(s)	1349
OliI	CACNNNNGTG	1 cut(s)	1901
PaeR7I	CTCGAG	1 cut(s)	1625
PceI	AGGCCT	1 cut(s)	430
PciI	ACATGT	1 cut(s)	1602
PciSI	GCTCTTC	2 cut(s)	23, 1257
PcsI	WCGNNNNNNNCGW	2 cut(s)	289, 1346
PdiI	GCCGGC	1 cut(s)	361
PdmI	GAANNNNTTC	3 cut(s)	146, 1251, 1499
PfeI	GAWTC	5 cut(s)	278, 407, 534, 1193, 1529
PfoI	TCCNGGA	1 cut(s)	433
PkrI	GCNGC	8 cut(s)	346, 358, 499, 847, 1168, 1372, 1929, 1969
PleI	GAGTC	3 cut(s)	17, 979, 1066
PmaCI	CACGTG	1 cut(s)	1491
PmlI	CACGTG	1 cut(s)	1491
PpsI	GAGTC	3 cut(s)	17, 979, 1066
Ppu21I	YACGTR	1 cut(s)	1491
PscI	ACATGT	1 cut(s)	1602
Psp124BI	GAGCTC	1 cut(s)	1682
Psp6I	CCWGG	2 cut(s)	433, 700
PspCI	CACGTG	1 cut(s)	1491
PspEI	GGTNACC	1 cut(s)	376
PspGI	CCWGG	2 cut(s)	433, 700
PspN4I	GGNNCC	4 cut(s)	606, 1161, 1572, 1766
PspPI	GGNCC	2 cut(s)	698, 1570
PspXI	VCTCGAGB	1 cut(s)	1625
PstI	CTGCAG	1 cut(s)	1743
PstNI	CAGNNNCTG	1 cut(s)	665
PsuI	RGATCY	2 cut(s)	604, 1034
PvuII	CAGCTG	1 cut(s)	1166
RruI	TCGCGA	1 cut(s)	1527
RsaI	GTAC	2 cut(s)	1300, 1766
RsaNI	GTAC	2 cut(s)	1299, 1765
RseI	CAYNNNNRTG	3 cut(s)	576, 636, 1901
SacI	GAGCTC	1 cut(s)	1682
SapI	GCTCTTC	2 cut(s)	23, 1257
SatI	GCNGC	8 cut(s)	345, 357, 498, 846, 1167, 1371, 1928, 1968
Sau96I	GGNCC	2 cut(s)	698, 1570
SbfI	CCTGCAGG	1 cut(s)	1743
ScaI	AGTACT	1 cut(s)	1300
SchI	GAGTC	3 cut(s)	17, 980, 1067
ScrFI	CCNGG	3 cut(s)	110, 435, 702
SdaI	CCTGCAGG	1 cut(s)	1743
SduI	GDGCHC	3 cut(s)	1272, 1682, 1826
SfaNI	GCATC	5 cut(s)	178, 308, 577, 742, 832
SfcI	CTRYAG	2 cut(s)	414, 1739
Sfr274I	CTCGAG	1 cut(s)	1625
SfuI	TTCGAA	1 cut(s)	1349
SinI	GGWCC	2 cut(s)	698, 1570
SlaI	CTCGAG	1 cut(s)	1625
SmiMI	CAYNNNNRTG	3 cut(s)	576, 636, 1901
SmlI	CTYRAG	3 cut(s)	1183, 1241, 1625
SmoI	CTYRAG	3 cut(s)	1183, 1241, 1625
Sse8387I	CCTGCAGG	1 cut(s)	1743
SseBI	AGGCCT	1 cut(s)	430
SsiI	CCGC	5 cut(s)	46, 767, 1082, 1202, 1968
SspMI	CTAG	2 cut(s)	1013, 1751
SstI	GAGCTC	1 cut(s)	1682
StuI	AGGCCT	1 cut(s)	430
StyD4I	CCNGG	3 cut(s)	108, 433, 700
StyI	CCWWGG	1 cut(s)	728
TaaI	ACNGT	6 cut(s)	98, 273, 575, 1436, 1586, 1769
TaiI	ACGT	3 cut(s)	1493, 1823, 1839
TaqI	TCGA	6 cut(s)	26, 292, 314, 742, 1349, 1626
TatI	WGTACW	1 cut(s)	1298
TauI	GCSGC	1 cut(s)	1970
TfiI	GAWTC	5 cut(s)	278, 407, 534, 1193, 1529
TseFI	GTSAC	2 cut(s)	1113, 1714
TseI	GCWGC	7 cut(s)	344, 356, 497, 845, 1166, 1370, 1927
Tsp45I	GTSAC	2 cut(s)	1113, 1714
TspDTI	ATGAA	8 cut(s)	342, 471, 531, 620, 932, 1140, 1308, 1555
TspGWI	ACGGA	1 cut(s)	298
VneI	GTGCAC	1 cut(s)	1822
VpaK11BI	GGWCC	2 cut(s)	698, 1570
XagI	CCTNNNNNAGG	1 cut(s)	1754
XapI	RAATTY	5 cut(s)	146, 310, 803, 919, 1708
XceI	RCATGY	2 cut(s)	1516, 1606
XhoI	CTCGAG	1 cut(s)	1625
XmiI	GTMKAC	2 cut(s)	1061, 1779
XmnI	GAANNNNTTC	3 cut(s)	146, 1251, 1499
XspI	CTAG	2 cut(s)	1013, 1751
ZrmI	AGTACT	1 cut(s)	1300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.