Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0007830

Physical Location & Seq

Genomic Coordinates Forward (+)

3808225 .. 3812793

Gene Structure 4569 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G004500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGGAGGTTGGTGGTGGTGTTGACTCGGAGAGCAAAAGTCAACGGCGGGTAGGGTTGTTATACGACGAGAGGATGTGTAAGCACTCCACACCGGACGGTGATCCTCACCCGGAAAACCCTGACCGGATTAAGGTCATCTGGAACAAATTCCAAGCCAATTCCATTCCTCAGAGGTGTGTTCTTTTGGATGCCAAAGAAGCAGAAGACAAACATATCTTGGCAGTCCACTCCCAAAAGCATGTTAATTTGATCAAGAAGATAAGCTCCAAACAGTTTGATTCACGGAGAAATCGAATTGCATCAAGTTTGAATTCGATATATTTGAATGAAGGAACATCCGAAGCTGCCTATCTTGCCGCCGGCTCTGCCATAGAGGTAACTGAAAGAGTTGCAAAAGGAGAAGTGGATTCTGCTGTAGCTATTATTAGGCCTCCAGGACATCATGCCGAAGAAGATGAAGCTATGGGGTTTTGTCTTTTCAACAATGTAGCTATTGCAGCAAGTTATGTTTTAAATGAAAAGCCAGAATTGGGAATCAACAAAATACTGATCGTTGATTGGGATGTGCATCACGGTAATGCCACTCAAAAGATGTTCTGGAAGGATCCTCGTGTTTTATTCTTCTCAGTTCATAGGCATGAGTTTGGAAGTTTTTATCCAGCTACTGATGATGGTTTCTATACTATGGTTGGAGAAGGACCAGGAGCAGGCTATAACATTAATGTCCCTTGGGAAAATGGTCGATGTGGAGATGCTGATTATTTTGCGGTTTGGGAGCATATCTTGCTTCCAGTTGCCAAAGAATTCAATCCCGACTTAATTATAGTCTCTGCTGGATTTGATGCAGCTATTGGTGATCCTTTGGGGGGTTGTCGGATCACACCATATGGATATTCAGTTATGCTGAAGAAGTTGATGAATTTTGCCAATGGAAAGATCGTCTTGGCTTTAGAAGGAGGATATAATTTTGAGTCTATAGCAAAGTCAATGCTTGCTTGTGTTGAAGTTCTGCTAGAGGACAAACCTATTCTTGGATCTTCGGAGGCATACCCATTTGAGTCTACATGGCGTGTGATACAAGCGGTTCGCCAGAAATTAAGTGCTTACTGGCCGTCACTTGCAGATGAATTGCCAGAGGAGTTAATCAATCAAAAAGTGGCTCCAGCTGTGGTACATTTCCTCTTCTCTTGCCAGTACTTTGTTGTTGATTGTGGACAGGTGGACGGTTTGCAAAAGTCATGTGTTGGTTCGGTGGATAAAACTCCACCGAAAGAGATCACGTGGAAGACTTTCCCTCGTCGCATATTCTTTGGTCGCGAATCTACTCTGTCATGGGGTCCTGGAGGGGTTGCGTTCATGGACCCTGAAAGCAACAGTCAGGATAAAACTCACATGTGCCTGTATAGAATTACGCTCGAGCAGTTTAACGATTTGTTGGTGCAGGAAAATTATGGAGGCTATGCCATGAGCTCTCCTCTGTTCGACTTGACTGCTTTAAATTCAGTCACAGGTCAAGAACCTCATTCCCTGCAGGTTCGCCTAGAGGGTTGGTACCGTAATGTTGTCTACTTGGGCAAGGAGCGTGACATTCCAGTACTGACTATGACGTGCACACCGTCGGATGTTGAGGGCTTCAAATCCGGAGAGCTTCCCTTGTGCGCTCCAGCCAAGAATTATGCAAACACAATAGTGAGAGGCTTGGTGGAAGGAAAGCAGCTTTCACAGGAGGAGGCAATGGCTTACGTACAAGAAGCAGCTACTAGAGCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006338 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019538 GO:0022622 GO:0030154 GO:0030856 GO:0032501 GO:0032502 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051276 GO:0065007 GO:0071704 GO:0071840 GO:0090558 GO:0090627 GO:0098732 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko05034 ko05165 ko05203 map05034 map05165 map05203

Pfam Domains

Protein Families

Hist_deacetyl

Protein Analysis

590

Amino Acids

65.52

Weight (kDa)

5.38

Isoelectric Point (pI)

36.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hist_deacetyl	PF00850	36 - 337	3.2e-93	Histone deacetylase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007830)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61050 AT5G61060 AT5G61060
fragaria_vesca	FvH4_5g13910 FvH4_5g13910 FvH4_5g13910
malus_domestica	MD06G1202300.v1.1 MD14G1211400.v1.1
prunus_persica	Prupe.5G204500_v2.0.a1 Prupe.5G204500_v2.0.a1
pyrus_communis	pycom06g17830 pycom07g03000 pycom07g07960 pycom14g17500
rosa_chinensis	RchiOBHm_Chr7g0183031
rosa_laevigata	RLG00000005086
rosa_multiflora	Rmu_sc0000014.1_g000006
rosa_roxburghii	Rroxscaffold_3G00270830
rosa_rugosa	Rorug06G0451900
rosa_samantha	Rh7AG055400 Rh7BG054800 Rh7CG056100 Rh7DG054900
rosa_wichuraiana	Rw7G004500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1522
Acc65I	GGTACC	1 cut(s)	1551
AccB1I	GGYRCC	1 cut(s)	1551
AccI	GTMKAC	2 cut(s)	1061, 1566
AccII	CGCG	1 cut(s)	1317
AccIII	TCCGGA	1 cut(s)	1640
AciI	CCGC	4 cut(s)	46, 357, 767, 1082
AclWI	GGATC	6 cut(s)	95, 599, 612, 851, 884, 1042
AcoI	YGGCCR	1 cut(s)	1109
AcsI	RAATTY	5 cut(s)	146, 310, 803, 919, 1498
AcuI	CTGAAG	1 cut(s)	926
AcvI	CACGTG	1 cut(s)	1281
AfaI	GTAC	5 cut(s)	1173, 1196, 1553, 1596, 1746
AfiI	CCNNNNNNNGG	5 cut(s)	130, 530, 707, 866, 1031
AflIII	ACRYGT	1 cut(s)	1392
AgsI	TTSAA	6 cut(s)	310, 325, 481, 808, 1004, 1636
AjiI	CACGTC	1 cut(s)	1608
AjnI	CCWGG	3 cut(s)	433, 700, 1339
AleI	CACNNNNGTG	1 cut(s)	1688
Alw21I	GWGCWC	2 cut(s)	1472, 1613
Alw26I	GTCTC	1 cut(s)	832
Alw44I	GTGCAC	1 cut(s)	1609
AlwI	GGATC	6 cut(s)	95, 599, 612, 851, 884, 1042
AlwNI	CAGNNNCTG	1 cut(s)	665
Ama87I	CYCGRG	1 cut(s)	1415
Aor13HI	TCCGGA	1 cut(s)	1640
AoxI	GGCC	2 cut(s)	428, 1109
ApaLI	GTGCAC	1 cut(s)	1609
ApeKI	GCWGC	5 cut(s)	344, 497, 845, 1714, 1754
ApoI	RAATTY	5 cut(s)	146, 310, 803, 919, 1498
AseI	ATTAAT	1 cut(s)	720
Asp700I	GAANNNNTTC	2 cut(s)	146, 1289
Asp718I	GGTACC	1 cut(s)	1551
AspLEI	GCGC	1 cut(s)	1661
AspS9I	GGNCC	3 cut(s)	698, 1337, 1360
AsuC2I	CCSGG	1 cut(s)	110
AsuHPI	GGTGA	3 cut(s)	98, 110, 866
AvaI	CYCGRG	1 cut(s)	1415
AvaII	GGWCC	3 cut(s)	698, 1337, 1360
BaeGI	GKGCMC	1 cut(s)	1613
BamHI	GGATCC	1 cut(s)	604
BanI	GGYRCC	1 cut(s)	1551
BanII	GRGCYC	1 cut(s)	1472
BauI	CACGAG	1 cut(s)	609
BbrPI	CACGTG	1 cut(s)	1281
BbsI	GAAGAC	2 cut(s)	210, 1292
Bbv12I	GWGCWC	2 cut(s)	1472, 1613
BbvI	GCAGC	5 cut(s)	331, 509, 857, 1726, 1766
BccI	CCATC	1 cut(s)	665
BceAI	ACGGC	2 cut(s)	59, 1096
BcgI	CGANNNNNNTGC	2 cut(s)	1472, 1506
BciT130I	CCWGG	3 cut(s)	435, 702, 1341
BclI	TGATCA	1 cut(s)	249
BcnI	CCSGG	1 cut(s)	110
BcoDI	GTCTC	1 cut(s)	832
BfaI	CTAG	3 cut(s)	1013, 1541, 1761
BfmI	CTRYAG	3 cut(s)	414, 975, 1529
BfuAI	ACCTGC	1 cut(s)	1522
BisI	GCNGC	6 cut(s)	345, 357, 498, 846, 1715, 1755
BlsI	GCNGC	6 cut(s)	346, 358, 499, 847, 1716, 1756
BmcAI	AGTACT	2 cut(s)	1196, 1596
Bme1390I	CCNGG	4 cut(s)	110, 435, 702, 1341
Bme18I	GGWCC	3 cut(s)	698, 1337, 1360
BmeT110I	CYCGRG	1 cut(s)	1415
BmgBI	CACGTC	1 cut(s)	1608
BmgT120I	GGNCC	3 cut(s)	698, 1337, 1360
BmiI	GGNNCC	5 cut(s)	606, 1161, 1338, 1362, 1553
BmrFI	CCNGG	4 cut(s)	110, 435, 702, 1341
BmsI	GCATC	5 cut(s)	178, 308, 577, 742, 832
BpiI	GAAGAC	2 cut(s)	210, 1292
BplI	GAGNNNNNCTC	2 cut(s)	1459, 1491
BpmI	CTGGAG	4 cut(s)	417, 1146, 1362, 1647
BpuMI	CCSGG	1 cut(s)	110
BsaAI	YACGTR	2 cut(s)	1281, 1744
BsaBI	GATNNNNATC	1 cut(s)	567
BsaJI	CCNNGG	1 cut(s)	728
BsaWI	WCCGGW	3 cut(s)	91, 123, 1640
Bsc4I	CCNNNNNNNGG	5 cut(s)	130, 530, 707, 866, 1031
Bse118I	RCCGGY	1 cut(s)	359
Bse1I	ACTGG	4 cut(s)	791, 1112, 1192, 1592
Bse3DI	GCAATG	1 cut(s)	1740
Bse8I	GATNNNNATC	1 cut(s)	567
BseAI	TCCGGA	1 cut(s)	1640
BseBI	CCWGG	3 cut(s)	435, 702, 1341
BseDI	CCNNGG	1 cut(s)	728
BseGI	GGATG	5 cut(s)	78, 193, 335, 568, 1627
BseJI	GATNNNNATC	1 cut(s)	567
BseLI	CCNNNNNNNGG	5 cut(s)	130, 530, 707, 866, 1031
BseMI	GCAATG	1 cut(s)	1740
BseMII	CTCAG	2 cut(s)	182, 639
BseNI	ACTGG	4 cut(s)	791, 1112, 1192, 1592
BseRI	GAGGAG	3 cut(s)	1151, 1464, 1742
BseSI	GKGCMC	1 cut(s)	1613
BseXI	GCAGC	5 cut(s)	331, 509, 857, 1726, 1766
BsgI	GTGCAG	1 cut(s)	1460
Bsh1236I	CGCG	1 cut(s)	1317
BshFI	GGCC	2 cut(s)	430, 1111
BshNI	GGYRCC	1 cut(s)	1551
BsiHKAI	GWGCWC	2 cut(s)	1472, 1613
BsiHKCI	CYCGRG	1 cut(s)	1415
BsiSI	CCGG	5 cut(s)	92, 110, 124, 360, 1641
BslFI	GGGAC	1 cut(s)	710
BslI	CCNNNNNNNGG	5 cut(s)	130, 530, 707, 866, 1031
BsmAI	GTCTC	1 cut(s)	832
BsmFI	GGGAC	1 cut(s)	710
BsnI	GGCC	2 cut(s)	430, 1111
BsoBI	CYCGRG	1 cut(s)	1415
Bsp1286I	GDGCHC	2 cut(s)	1472, 1613
Bsp13I	TCCGGA	1 cut(s)	1640
Bsp143I	GATC	9 cut(s)	100, 249, 549, 604, 856, 876, 936, 1034, 1275
Bsp68I	TCGCGA	1 cut(s)	1317
BspACI	CCGC	4 cut(s)	46, 357, 767, 1082
BspANI	GGCC	2 cut(s)	430, 1111
BspCNI	CTCAG	2 cut(s)	181, 638
BspEI	TCCGGA	1 cut(s)	1640
BspFNI	CGCG	1 cut(s)	1317
BspLI	GGNNCC	5 cut(s)	606, 1161, 1338, 1362, 1553
BspMAI	CTGCAG	1 cut(s)	1533
BspMI	ACCTGC	1 cut(s)	1522
BspPI	GGATC	6 cut(s)	95, 599, 612, 851, 884, 1042
BspT107I	GGYRCC	1 cut(s)	1551
BsrDI	GCAATG	1 cut(s)	1740
BsrFI	RCCGGY	1 cut(s)	359
BsrI	ACTGG	4 cut(s)	791, 1112, 1192, 1592
BssAI	RCCGGY	1 cut(s)	359
BssECI	CCNNGG	1 cut(s)	728
BssMI	GATC	9 cut(s)	100, 249, 549, 604, 856, 876, 936, 1034, 1275
BssSI	CACGAG	1 cut(s)	609
BssT1I	CCWWGG	1 cut(s)	728
Bst2BI	CACGAG	1 cut(s)	609
Bst2UI	CCWGG	3 cut(s)	435, 702, 1341
Bst4CI	ACNGT	7 cut(s)	98, 273, 575, 1226, 1376, 1556, 1617
Bst6I	CTCTTC	1 cut(s)	1187
BstAPI	GCANNNNNTGC	1 cut(s)	784
BstBAI	YACGTR	2 cut(s)	1281, 1744
BstC8I	GCNNGC	3 cut(s)	361, 709, 993
BstDEI	CTNAG	2 cut(s)	168, 625
BstF5I	GGATG	5 cut(s)	78, 193, 335, 568, 1627
BstFNI	CGCG	1 cut(s)	1317
BstHHI	GCGC	1 cut(s)	1661
BstKTI	GATC	9 cut(s)	103, 252, 552, 607, 859, 879, 939, 1037, 1278
BstMAI	GTCTC	1 cut(s)	832
BstMBI	GATC	9 cut(s)	100, 249, 549, 604, 856, 876, 936, 1034, 1275
BstMWI	GCNNNNNNNGC	6 cut(s)	197, 353, 365, 497, 784, 1763
BstNI	CCWGG	3 cut(s)	435, 702, 1341
BstNSI	RCATGY	2 cut(s)	242, 1396
BstSCI	CCNGG	4 cut(s)	108, 433, 700, 1339
BstSFI	CTRYAG	3 cut(s)	414, 975, 1529
BstSLI	GKGCMC	1 cut(s)	1613
BstSNI	TACGTA	1 cut(s)	1744
BstUI	CGCG	1 cut(s)	1317
BstV1I	GCAGC	5 cut(s)	331, 509, 857, 1726, 1766
BstV2I	GAAGAC	2 cut(s)	210, 1292
BstX2I	RGATCY	2 cut(s)	604, 1034
BstYI	RGATCY	2 cut(s)	604, 1034
BsuRI	GGCC	2 cut(s)	430, 1111
BtrI	CACGTC	1 cut(s)	1608
BtsCI	GGATG	5 cut(s)	78, 193, 335, 568, 1627
BtuMI	TCGCGA	1 cut(s)	1317
BveI	ACCTGC	1 cut(s)	1522
Cac8I	GCNNGC	3 cut(s)	361, 709, 993
CaiI	CAGNNNCTG	1 cut(s)	665
CfoI	GCGC	1 cut(s)	1661
Cfr10I	RCCGGY	1 cut(s)	359
Cfr13I	GGNCC	3 cut(s)	698, 1337, 1360
Csp6I	GTAC	5 cut(s)	1172, 1195, 1552, 1595, 1745
CviAII	CATG	9 cut(s)	239, 443, 638, 1065, 1239, 1332, 1357, 1393, 1465
CviQI	GTAC	5 cut(s)	1172, 1195, 1552, 1595, 1745
DdeI	CTNAG	2 cut(s)	168, 625
DpnI	GATC	9 cut(s)	102, 251, 551, 606, 858, 878, 938, 1036, 1277
DpnII	GATC	9 cut(s)	100, 249, 549, 604, 856, 876, 936, 1034, 1275
DraI	TTTAAA	2 cut(s)	513, 1497
EaeI	YGGCCR	1 cut(s)	1109
Eam1104I	CTCTTC	1 cut(s)	1187
EarI	CTCTTC	1 cut(s)	1187
Ecl136II	GAGCTC	1 cut(s)	1470
Eco105I	TACGTA	1 cut(s)	1744
Eco130I	CCWWGG	1 cut(s)	728
Eco147I	AGGCCT	1 cut(s)	430
Eco24I	GRGCYC	1 cut(s)	1472
Eco47I	GGWCC	3 cut(s)	698, 1337, 1360
Eco53kI	GAGCTC	1 cut(s)	1470
Eco57I	CTGAAG	1 cut(s)	926
Eco72I	CACGTG	1 cut(s)	1281
Eco88I	CYCGRG	1 cut(s)	1415
EcoICRI	GAGCTC	1 cut(s)	1470
EcoO109I	RGGNCCY	1 cut(s)	1337
EcoRI	GAATTC	2 cut(s)	310, 803
EcoRII	CCWGG	3 cut(s)	433, 700, 1339
EcoT14I	CCWWGG	1 cut(s)	728
EcoT38I	GRGCYC	1 cut(s)	1472
ErhI	CCWWGG	1 cut(s)	728
FaeI	CATG	9 cut(s)	242, 446, 641, 1068, 1242, 1335, 1360, 1396, 1468
FalI	AAGNNNNNCTT	2 cut(s)	926, 958
FaqI	GGGAC	1 cut(s)	710
FatI	CATG	9 cut(s)	238, 442, 637, 1064, 1238, 1331, 1356, 1392, 1464
FauI	CCCGC	1 cut(s)	39
FauNDI	CATATG	1 cut(s)	886
FbaI	TGATCA	1 cut(s)	249
FblI	GTMKAC	2 cut(s)	1061, 1566
Fnu4HI	GCNGC	6 cut(s)	345, 357, 498, 846, 1715, 1755
FokI	GGATG	5 cut(s)	85, 200, 322, 575, 1634
FriOI	GRGCYC	1 cut(s)	1472
Fsp4HI	GCNGC	6 cut(s)	345, 357, 498, 846, 1715, 1755
FspBI	CTAG	3 cut(s)	1013, 1541, 1761
GlaI	GCGC	1 cut(s)	1660
GluI	GCNGC	6 cut(s)	345, 357, 498, 846, 1715, 1755
GsuI	CTGGAG	4 cut(s)	417, 1146, 1362, 1647
HaeIII	GGCC	2 cut(s)	430, 1111
HapII	CCGG	5 cut(s)	92, 110, 124, 360, 1641
HhaI	GCGC	1 cut(s)	1661
Hin1II	CATG	9 cut(s)	242, 446, 641, 1068, 1242, 1335, 1360, 1396, 1468
Hin6I	GCGC	1 cut(s)	1659
HinP1I	GCGC	1 cut(s)	1659
HincII	GTYRAC	2 cut(s)	22, 41
HindII	GTYRAC	2 cut(s)	22, 41
HinfI	GANTC	7 cut(s)	23, 278, 407, 534, 971, 1058, 1319
HpaII	CCGG	5 cut(s)	92, 110, 124, 360, 1641
HphI	GGTGA	3 cut(s)	98, 110, 866
Hpy166II	GTNNAC	8 cut(s)	22, 41, 226, 1062, 1214, 1222, 1567, 1611
Hpy188I	TCNGA	6 cut(s)	28, 171, 340, 876, 1042, 1621
Hpy188III	TCNNGA	8 cut(s)	139, 253, 598, 812, 1316, 1379, 1514, 1641
Hpy8I	GTNNAC	8 cut(s)	22, 41, 226, 1062, 1214, 1222, 1567, 1611
Hpy99I	CGWCG	3 cut(s)	68, 1302, 1621
HpyAV	CCTTC	5 cut(s)	323, 595, 689, 947, 1700
HpyCH4III	ACNGT	7 cut(s)	98, 273, 575, 1226, 1376, 1556, 1617
HpyCH4IV	ACGT	3 cut(s)	1280, 1607, 1743
HpyF10VI	GCNNNNNNNGC	6 cut(s)	197, 353, 365, 497, 784, 1763
HpyF3I	CTNAG	2 cut(s)	168, 625
HpySE526I	ACGT	3 cut(s)	1280, 1607, 1743
Hsp92II	CATG	9 cut(s)	242, 446, 641, 1068, 1242, 1335, 1360, 1396, 1468
HspAI	GCGC	1 cut(s)	1659
Kpn2I	TCCGGA	1 cut(s)	1640
KpnI	GGTACC	1 cut(s)	1555
KroI	GCCGGC	1 cut(s)	359
KroNI	GCCGGC	1 cut(s)	361
Ksp22I	TGATCA	1 cut(s)	249
Kzo9I	GATC	9 cut(s)	100, 249, 549, 604, 856, 876, 936, 1034, 1275
LmnI	GCTCC	6 cut(s)	269, 704, 775, 1165, 1579, 1666
Lsp1109I	GCAGC	5 cut(s)	331, 509, 857, 1726, 1766
LweI	GCATC	5 cut(s)	178, 308, 577, 742, 832
MaeI	CTAG	3 cut(s)	1013, 1541, 1761
MaeII	ACGT	3 cut(s)	1280, 1607, 1743
MaeIII	GTNAC	4 cut(s)	376, 1113, 1504, 1583
MalI	GATC	9 cut(s)	102, 251, 551, 606, 858, 878, 938, 1036, 1277
MboI	GATC	9 cut(s)	100, 249, 549, 604, 856, 876, 936, 1034, 1275
MboII	GAAGA	9 cut(s)	215, 268, 461, 464, 613, 919, 1029, 1174, 1297
MflI	RGATCY	2 cut(s)	604, 1034
MhlI	GDGCHC	2 cut(s)	1472, 1613
MlyI	GAGTC	3 cut(s)	17, 980, 1067
MmeI	TCCRAC	3 cut(s)	670, 854, 1599
MroI	TCCGGA	1 cut(s)	1640
MroNI	GCCGGC	1 cut(s)	359
MroXI	GAANNNNTTC	2 cut(s)	146, 1289
MseI	TTAA	9 cut(s)	129, 243, 512, 720, 818, 1097, 1142, 1425, 1496
MslI	CAYNNNNRTG	3 cut(s)	576, 636, 1688
MspA1I	CMGCKG	1 cut(s)	1166
MspI	CCGG	5 cut(s)	92, 110, 124, 360, 1641
MspR9I	CCNGG	4 cut(s)	110, 435, 702, 1341
MvaI	CCWGG	3 cut(s)	435, 702, 1341
MvnI	CGCG	1 cut(s)	1317
MwoI	GCNNNNNNNGC	6 cut(s)	197, 353, 365, 497, 784, 1763
NaeI	GCCGGC	1 cut(s)	361
NciI	CCSGG	1 cut(s)	110
NdeI	CATATG	1 cut(s)	886
NdeII	GATC	9 cut(s)	100, 249, 549, 604, 856, 876, 936, 1034, 1275
NgoMIV	GCCGGC	1 cut(s)	359
NlaIII	CATG	9 cut(s)	242, 446, 641, 1068, 1242, 1335, 1360, 1396, 1468
NlaIV	GGNNCC	5 cut(s)	606, 1161, 1338, 1362, 1553
NmuCI	GTSAC	3 cut(s)	1113, 1504, 1583
NruI	TCGCGA	1 cut(s)	1317
NspI	RCATGY	2 cut(s)	242, 1396
OliI	CACNNNNGTG	1 cut(s)	1688
PaeR7I	CTCGAG	1 cut(s)	1415
PceI	AGGCCT	1 cut(s)	430
PciI	ACATGT	1 cut(s)	1392
PcsI	WCGNNNNNNNCGW	2 cut(s)	289, 1613
PdiI	GCCGGC	1 cut(s)	361
PdmI	GAANNNNTTC	2 cut(s)	146, 1289
PfeI	GAWTC	4 cut(s)	278, 407, 534, 1319
PfoI	TCCNGGA	2 cut(s)	433, 1339
PkrI	GCNGC	6 cut(s)	346, 358, 499, 847, 1716, 1756
PleI	GAGTC	3 cut(s)	17, 979, 1066
PmaCI	CACGTG	1 cut(s)	1281
PmlI	CACGTG	1 cut(s)	1281
PpsI	GAGTC	3 cut(s)	17, 979, 1066
Ppu21I	YACGTR	2 cut(s)	1281, 1744
PpuMI	RGGWCCY	1 cut(s)	1337
PscI	ACATGT	1 cut(s)	1392
PshBI	ATTAAT	1 cut(s)	720
Psp124BI	GAGCTC	1 cut(s)	1472
Psp5II	RGGWCCY	1 cut(s)	1337
Psp6I	CCWGG	3 cut(s)	433, 700, 1339
PspCI	CACGTG	1 cut(s)	1281
PspGI	CCWGG	3 cut(s)	433, 700, 1339
PspN4I	GGNNCC	5 cut(s)	606, 1161, 1338, 1362, 1553
PspPI	GGNCC	3 cut(s)	698, 1337, 1360
PspPPI	RGGWCCY	1 cut(s)	1337
PspXI	VCTCGAGB	1 cut(s)	1415
PstI	CTGCAG	1 cut(s)	1533
PstNI	CAGNNNCTG	1 cut(s)	665
PsuI	RGATCY	2 cut(s)	604, 1034
PvuII	CAGCTG	1 cut(s)	1166
RruI	TCGCGA	1 cut(s)	1317
RsaI	GTAC	5 cut(s)	1173, 1196, 1553, 1596, 1746
RsaNI	GTAC	5 cut(s)	1172, 1195, 1552, 1595, 1745
RseI	CAYNNNNRTG	3 cut(s)	576, 636, 1688
SacI	GAGCTC	1 cut(s)	1472
SaqAI	TTAA	9 cut(s)	129, 243, 512, 720, 818, 1097, 1142, 1425, 1496
SatI	GCNGC	6 cut(s)	345, 357, 498, 846, 1715, 1755
Sau3AI	GATC	9 cut(s)	100, 249, 549, 604, 856, 876, 936, 1034, 1275
Sau96I	GGNCC	3 cut(s)	698, 1337, 1360
SbfI	CCTGCAGG	1 cut(s)	1533
ScaI	AGTACT	2 cut(s)	1196, 1596
SchI	GAGTC	3 cut(s)	17, 980, 1067
ScrFI	CCNGG	4 cut(s)	110, 435, 702, 1341
SdaI	CCTGCAGG	1 cut(s)	1533
SduI	GDGCHC	2 cut(s)	1472, 1613
SfaNI	GCATC	5 cut(s)	178, 308, 577, 742, 832
SfcI	CTRYAG	3 cut(s)	414, 975, 1529
Sfr274I	CTCGAG	1 cut(s)	1415
SinI	GGWCC	3 cut(s)	698, 1337, 1360
SlaI	CTCGAG	1 cut(s)	1415
SmiMI	CAYNNNNRTG	3 cut(s)	576, 636, 1688
SmlI	CTYRAG	1 cut(s)	1415
SmoI	CTYRAG	1 cut(s)	1415
SnaBI	TACGTA	1 cut(s)	1744
Sse8387I	CCTGCAGG	1 cut(s)	1533
SseBI	AGGCCT	1 cut(s)	430
SsiI	CCGC	4 cut(s)	46, 357, 767, 1082
SspMI	CTAG	3 cut(s)	1013, 1541, 1761
SstI	GAGCTC	1 cut(s)	1472
StuI	AGGCCT	1 cut(s)	430
StyD4I	CCNGG	4 cut(s)	108, 433, 700, 1339
StyI	CCWWGG	1 cut(s)	728
TaaI	ACNGT	7 cut(s)	98, 273, 575, 1226, 1376, 1556, 1617
TaiI	ACGT	3 cut(s)	1283, 1610, 1746
TaqI	TCGA	5 cut(s)	292, 314, 742, 1416, 1482
TatI	WGTACW	2 cut(s)	1194, 1594
TauI	GCSGC	1 cut(s)	359
TfiI	GAWTC	4 cut(s)	278, 407, 534, 1319
Tru1I	TTAA	9 cut(s)	129, 243, 512, 720, 818, 1097, 1142, 1425, 1496
Tru9I	TTAA	9 cut(s)	129, 243, 512, 720, 818, 1097, 1142, 1425, 1496
TseFI	GTSAC	3 cut(s)	1113, 1504, 1583
TseI	GCWGC	5 cut(s)	344, 497, 845, 1714, 1754
Tsp45I	GTSAC	3 cut(s)	1113, 1504, 1583
TspDTI	ATGAA	7 cut(s)	342, 471, 531, 620, 932, 1140, 1345
TspGWI	ACGGA	1 cut(s)	298
VneI	GTGCAC	1 cut(s)	1609
VpaK11BI	GGWCC	3 cut(s)	698, 1337, 1360
VspI	ATTAAT	1 cut(s)	720
XapI	RAATTY	5 cut(s)	146, 310, 803, 919, 1498
XceI	RCATGY	2 cut(s)	242, 1396
XhoI	CTCGAG	1 cut(s)	1415
XmiI	GTMKAC	2 cut(s)	1061, 1566
XmnI	GAANNNNTTC	2 cut(s)	146, 1289
XspI	CTAG	3 cut(s)	1013, 1541, 1761
ZrmI	AGTACT	2 cut(s)	1196, 1596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.