Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0007830

Physical Location & Seq

Genomic Coordinates Forward (+)

29675771 .. 29680612

Gene Structure 4842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1211400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGAGGTTGCTGAAGATGTTGACTGTGAGAGCAAAGGTCAGCAGCAGAAGAGGACGAGGAGGGTAGGATTGTTGTACGACGAGAGGATGTGTAAGCACTCCACACCCGACGGCGATCCTCATCCGGAAAACCCCAACCGAATTAAGGCAATCTGGAACAAGCTCCAATCAGCTGCCATTCCCCAGAGGTGTGTTGTTTTGGAAGCAAAAGAAGCAGAAGACAAGCATATTTTGTCAGTTCACACCAAAAAACATGTTGATCTGATTAGGAATATAAGCTCCAAACAGTTTAATTCACGGAGAAATCGGATTGCGTCGAAATTCAATTCCATATATCTCAATGAAGGATCATCCGAAGCTGCCTACCTTGCCGCGGGCTCTGCCATAGAGGTGGCGGAAAGAGTTGCCAAAGGCGAACTAGATTCTGCTGTGGCTATCATTAGGCCTCCAGGACATCATGCGGAACAAGACGAAGCTATGGGATTTTGCCTGTACAACAATGTAGCTATTGCAGCAAGTGTCCTTTTAAATGAAAAACCAGAACTGGGTATCAACAAAATTTTGATTGTTGACTGGGATGTGCATCATGGTAACGGTACTCAAAAGATGTTCTGGAAGGATCCTCGTGTTTTATTCTTCTCTGTTCATAGGCATGAGTTTGGAAGTTTTTATCCAGCTAATGATGATGGTTTCTATACTATGATTGGAGAAGGAGCAGGAGCAGGATACAACATTAATGTCCCCTGGGAAAATGGAGGGTGTGGGGACGCAGACTATTTTGCAGTTTGGGACCATATTTTGGTTCCTGTTGCCAAGGAGTTTAATCCCGATTTAATTATAGTCTCTGCAGGATTTGATGCAGCTGCTGGTGATCCTCTAGGGGGTTGTCGTGTCACACCATATGGATACGCAGTTTTGTTGAAAAAGTTGATGAGTTTTGCGAACGGAAAAATCGTGTTGGCTTTAGAAGGAGGATACAATCTCAAGTCTATTGCAAATTCAACTCTTTCTTGTGTTAAAGTTCTGCTGGACGACAATTCTATACATGGGTCTTCAGAGGCATACCCATTTGAGTCTACATGGCGTGTGATAAAAGCGGTTCGCCGGAAACTAAGTGCTTTCTGGCCATCACTTGCGGATGAATTACCAGAGTTGCTAACCAATCAAACAGCTCCTCCAGCTTCGTATATTCTCACCTCAAGCTCTGATTCTGAAGCGGAGGACAACGAAGGTCCAAATGTCATATCTAAACATCTTGAGGAGGTTCTTCAAGATGTTATAGAGCCCTTCTCGAAGTTGAAAGTTGACGGAAGTATTCAGGATCATGTGGCAAGTAATTCTTGCATCTGGAGATCAGAGCTCTCAAAGGTCGAGATTTGGTATGCCGCTTTTGGATCAAATCTGTGTCTAAAAAGATTTCTCTGCTATATTGAAGGTGGACAGATGGAAGGTATGAAAAGGCCATATCTTGGTTGTGCGGACAAAACTCCCCCAAAGGAGATTATGTGGAAGACTTTCCCTCATCGCTTGTTCTTTGGTCGTGAATCTACACTTACATGGGGTCCTGGAGGAGCCGCTTTCCTTAATCCCGAAAGCAACATCCAGGATAAGACTTATATGTGCCTGTATAGAATTACGCTTGAGCAGTTTAACGATGTAATAGTCCAGGAAAACGTTGCAAGTTTTCCTATGAACTCTCCTTTGTTTGACTTGGCTGGTTTAGACTCAGTCACTAGTGAGGAGCCTCATTCTCTACAGGTTCAACTAAAGTGTTGGTACGGTAATATTATCTACTTGGGCAAGGAGAATGATATTCCGATACTAACAATGACGTGTGCAAAATCACAAATGGAGGGCTTCAAATCCGGGGAGATTCCCTTGCGTGCTCCGGCCAAAAATTATGTCAACACAATCGTGAGGGGCTTGGTGGAAGGAAAACAACTTTCGCAGGAGGCGGCTATGGCTTACTTACAAAAAGCTTCTGTTAACCCATGGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006338 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019538 GO:0022622 GO:0030154 GO:0030856 GO:0032501 GO:0032502 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051276 GO:0065007 GO:0071704 GO:0071840 GO:0090558 GO:0090627 GO:0098732 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko05034 ko05165 ko05203 map05034 map05165 map05203

Pfam Domains

Protein Families

Hist_deacetyl

Protein Analysis

667

Amino Acids

73.91

Weight (kDa)

5.66

Isoelectric Point (pI)

42.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hist_deacetyl	PF00850	41 - 341	8.1e-96	Histone deacetylase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007830)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61050 AT5G61060 AT5G61060
fragaria_vesca	FvH4_5g13910 FvH4_5g13910 FvH4_5g13910
malus_domestica	MD06G1202300.v1.1 MD14G1211400.v1.1
prunus_persica	Prupe.5G204500_v2.0.a1 Prupe.5G204500_v2.0.a1
pyrus_communis	pycom06g17830 pycom07g03000 pycom07g07960 pycom14g17500
rosa_chinensis	RchiOBHm_Chr7g0183031
rosa_laevigata	RLG00000005086
rosa_multiflora	Rmu_sc0000014.1_g000006
rosa_roxburghii	Rroxscaffold_3G00270830
rosa_rugosa	Rorug06G0451900
rosa_samantha	Rh7AG055400 Rh7BG054800 Rh7CG056100 Rh7DG054900
rosa_wichuraiana	Rw7G004500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	799, 1469
AccI	GTMKAC	1 cut(s)	1076
AccII	CGCG	1 cut(s)	374
AccIII	TCCGGA	1 cut(s)	124
AclI	AACGTT	1 cut(s)	1674
AclWI	GGATC	7 cut(s)	110, 355, 614, 627, 866, 1329, 1402
AcoI	YGGCCR	2 cut(s)	1124, 1890
AcsI	RAATTY	3 cut(s)	320, 558, 997
AcuI	CTGAAG	3 cut(s)	33, 1038, 1233
AfaI	GTAC	4 cut(s)	77, 494, 598, 1778
AfiI	CCNNNNNNNGG	6 cut(s)	145, 373, 545, 799, 881, 1469
AflIII	ACRYGT	2 cut(s)	253, 1832
AgsI	TTSAA	8 cut(s)	325, 922, 1002, 1271, 1300, 1433, 1763, 1861
AhlI	ACTAGT	1 cut(s)	1733
AjiI	CACGTC	1 cut(s)	1833
AjnI	CCWGG	5 cut(s)	448, 743, 1564, 1602, 1665
AleI	CACNNNNGTG	1 cut(s)	1913
Alw21I	GWGCWC	2 cut(s)	1362, 1888
Alw26I	GTCTC	1 cut(s)	847
AlwI	GGATC	7 cut(s)	110, 355, 614, 627, 866, 1329, 1402
AlwNI	CAGNNNCTG	1 cut(s)	866
Aor13HI	TCCGGA	1 cut(s)	124
AoxI	GGCC	4 cut(s)	443, 1124, 1460, 1890
ApeKI	GCWGC	6 cut(s)	43, 173, 359, 512, 860, 863
ApoI	RAATTY	3 cut(s)	320, 558, 997
ArsI	GACNNNNNNTTYG	2 cut(s)	1887, 1919
AseI	ATTAAT	1 cut(s)	735
Asp700I	GAANNNNTTC	1 cut(s)	1514
AspS9I	GGNCC	3 cut(s)	790, 1232, 1562
AsuC2I	CCSGG	1 cut(s)	1867
AsuHPI	GGTGA	2 cut(s)	881, 1186
AvaII	GGWCC	3 cut(s)	790, 1232, 1562
BalI	TGGCCA	1 cut(s)	1126
BamHI	GGATCC	1 cut(s)	619
BanII	GRGCYC	3 cut(s)	380, 1287, 1362
BauI	CACGAG	1 cut(s)	624
BbsI	GAAGAC	3 cut(s)	225, 1044, 1517
Bbv12I	GWGCWC	2 cut(s)	1362, 1888
BbvI	GCAGC	6 cut(s)	55, 160, 346, 524, 850, 872
BccI	CCATC	3 cut(s)	680, 1135, 1438
BceAI	ACGGC	1 cut(s)	127
BciT130I	CCWGG	5 cut(s)	450, 745, 1566, 1604, 1667
BciVI	GTATCC	3 cut(s)	719, 899, 968
BcnI	CCSGG	1 cut(s)	1867
BcoDI	GTCTC	1 cut(s)	847
BcuI	ACTAGT	1 cut(s)	1733
BfaI	CTAG	3 cut(s)	419, 878, 1734
BfmI	CTRYAG	2 cut(s)	846, 1754
BfuI	GTATCC	3 cut(s)	719, 899, 968
Bme1390I	CCNGG	6 cut(s)	450, 745, 1566, 1604, 1667, 1867
Bme18I	GGWCC	3 cut(s)	790, 1232, 1562
BmgBI	CACGTC	1 cut(s)	1833
BmgT120I	GGNCC	3 cut(s)	790, 1232, 1562
BmiI	GGNNCC	6 cut(s)	621, 791, 804, 1563, 1573, 1743
BmrFI	CCNGG	6 cut(s)	450, 745, 1566, 1604, 1667, 1867
BmrI	ACTGGG	2 cut(s)	554, 583
BmsI	GCATC	3 cut(s)	592, 847, 1353
BmuI	ACTGGG	2 cut(s)	554, 583
BpiI	GAAGAC	3 cut(s)	225, 1044, 1517
BplI	GAGNNNNNCTC	2 cut(s)	1274, 1306
BpmI	CTGGAG	4 cut(s)	432, 1161, 1369, 1587
BpuEI	CTTGAG	4 cut(s)	968, 1183, 1277, 1661
BpuMI	CCSGG	1 cut(s)	1867
BsaBI	GATNNNNATC	2 cut(s)	120, 582
BsaJI	CCNNGG	6 cut(s)	372, 743, 744, 813, 1866, 1991
BsaWI	WCCGGW	1 cut(s)	124
BsaXI	ACNNNNNCTCC	4 cut(s)	1159, 1189, 1490, 1520
Bsc4I	CCNNNNNNNGG	6 cut(s)	145, 373, 545, 799, 881, 1469
Bse1I	ACTGG	2 cut(s)	549, 578
Bse8I	GATNNNNATC	2 cut(s)	120, 582
BseAI	TCCGGA	1 cut(s)	124
BseBI	CCWGG	5 cut(s)	450, 745, 1566, 1604, 1667
BseDI	CCNNGG	6 cut(s)	372, 743, 744, 813, 1866, 1991
BseGI	GGATG	6 cut(s)	93, 121, 350, 583, 1144, 1599
BseJI	GATNNNNATC	2 cut(s)	120, 582
BseLI	CCNNNNNNNGG	6 cut(s)	145, 373, 545, 799, 881, 1469
BseMII	CTCAG	1 cut(s)	1740
BseNI	ACTGG	2 cut(s)	549, 578
BseRI	GAGGAG	5 cut(s)	73, 1164, 1274, 1584, 1754
BseXI	GCAGC	6 cut(s)	55, 160, 346, 524, 850, 872
Bsh1236I	CGCG	1 cut(s)	374
BshFI	GGCC	4 cut(s)	445, 1126, 1462, 1892
BsiHKAI	GWGCWC	2 cut(s)	1362, 1888
BsiSI	CCGG	4 cut(s)	125, 1105, 1866, 1889
BslFI	GGGAC	3 cut(s)	725, 779, 803
BslI	CCNNNNNNNGG	6 cut(s)	145, 373, 545, 799, 881, 1469
BsmAI	GTCTC	1 cut(s)	847
BsmFI	GGGAC	3 cut(s)	725, 779, 803
BsnI	GGCC	4 cut(s)	445, 1126, 1462, 1892
Bsp1286I	GDGCHC	4 cut(s)	380, 1287, 1362, 1888
Bsp13I	TCCGGA	1 cut(s)	124
Bsp1407I	TGTACA	1 cut(s)	492
Bsp143I	GATC	8 cut(s)	115, 259, 347, 619, 871, 1321, 1352, 1394
Bsp19I	CCATGG	1 cut(s)	1991
BspANI	GGCC	4 cut(s)	445, 1126, 1462, 1892
BspCNI	CTCAG	1 cut(s)	1739
BspEI	TCCGGA	1 cut(s)	124
BspFNI	CGCG	1 cut(s)	374
BspLI	GGNNCC	6 cut(s)	621, 791, 804, 1563, 1573, 1743
BspMAI	CTGCAG	1 cut(s)	850
BspPI	GGATC	7 cut(s)	110, 355, 614, 627, 866, 1329, 1402
BsrGI	TGTACA	1 cut(s)	492
BsrI	ACTGG	2 cut(s)	549, 578
BssECI	CCNNGG	6 cut(s)	372, 743, 744, 813, 1866, 1991
BssMI	GATC	8 cut(s)	115, 259, 347, 619, 871, 1321, 1352, 1394
BssSI	CACGAG	1 cut(s)	624
BssT1I	CCWWGG	2 cut(s)	813, 1991
Bst2BI	CACGAG	1 cut(s)	624
Bst2UI	CCWGG	5 cut(s)	450, 745, 1566, 1604, 1667
Bst4CI	ACNGT	4 cut(s)	26, 288, 596, 1781
Bst6I	CTCTTC	1 cut(s)	44
BstAUI	TGTACA	1 cut(s)	492
BstC8I	GCNNGC	2 cut(s)	376, 1884
BstDEI	CTNAG	2 cut(s)	1112, 1726
BstDSI	CCRYGG	2 cut(s)	372, 1991
BstF5I	GGATG	6 cut(s)	93, 121, 350, 583, 1144, 1599
BstFNI	CGCG	1 cut(s)	374
BstKTI	GATC	8 cut(s)	118, 262, 350, 622, 874, 1324, 1355, 1397
BstMAI	GTCTC	1 cut(s)	847
BstMBI	GATC	8 cut(s)	115, 259, 347, 619, 871, 1321, 1352, 1394
BstMWI	GCNNNNNNNGC	6 cut(s)	212, 368, 380, 512, 1178, 1961
BstNI	CCWGG	5 cut(s)	450, 745, 1566, 1604, 1667
BstNSI	RCATGY	1 cut(s)	257
BstSCI	CCNGG	6 cut(s)	448, 743, 1564, 1602, 1665, 1865
BstSFI	CTRYAG	2 cut(s)	846, 1754
BstUI	CGCG	1 cut(s)	374
BstV1I	GCAGC	6 cut(s)	55, 160, 346, 524, 850, 872
BstV2I	GAAGAC	3 cut(s)	225, 1044, 1517
BstX2I	RGATCY	1 cut(s)	619
BstXI	CCANNNNNNTGG	1 cut(s)	391
BstYI	RGATCY	1 cut(s)	619
BsuI	GTATCC	3 cut(s)	719, 899, 968
BsuRI	GGCC	4 cut(s)	445, 1126, 1462, 1892
BtgI	CCRYGG	2 cut(s)	372, 1991
BtgZI	GCGATG	1 cut(s)	1508
BtrI	CACGTC	1 cut(s)	1833
BtsCI	GGATG	6 cut(s)	93, 121, 350, 583, 1144, 1599
Cac8I	GCNNGC	2 cut(s)	376, 1884
CaiI	CAGNNNCTG	1 cut(s)	866
Cfr13I	GGNCC	3 cut(s)	790, 1232, 1562
Cfr42I	CCGCGG	1 cut(s)	375
CseI	GACGC	2 cut(s)	303, 776
Csp6I	GTAC	4 cut(s)	76, 493, 597, 1777
CviAII	CATG	9 cut(s)	254, 458, 587, 653, 1046, 1080, 1325, 1557, 1992
CviQI	GTAC	4 cut(s)	76, 493, 597, 1777
DdeI	CTNAG	2 cut(s)	1112, 1726
DpnI	GATC	8 cut(s)	117, 261, 349, 621, 873, 1323, 1354, 1396
DpnII	GATC	8 cut(s)	115, 259, 347, 619, 871, 1321, 1352, 1394
DraI	TTTAAA	1 cut(s)	528
EaeI	YGGCCR	2 cut(s)	1124, 1890
Eam1104I	CTCTTC	1 cut(s)	44
EarI	CTCTTC	1 cut(s)	44
EciI	GGCGGA	1 cut(s)	410
Ecl136II	GAGCTC	1 cut(s)	1360
Eco130I	CCWWGG	2 cut(s)	813, 1991
Eco147I	AGGCCT	1 cut(s)	445
Eco24I	GRGCYC	3 cut(s)	380, 1287, 1362
Eco47I	GGWCC	3 cut(s)	790, 1232, 1562
Eco53kI	GAGCTC	1 cut(s)	1360
Eco57I	CTGAAG	3 cut(s)	33, 1038, 1233
EcoICRI	GAGCTC	1 cut(s)	1360
EcoO109I	RGGNCCY	1 cut(s)	1562
EcoRII	CCWGG	5 cut(s)	448, 743, 1564, 1602, 1665
EcoT14I	CCWWGG	2 cut(s)	813, 1991
EcoT38I	GRGCYC	3 cut(s)	380, 1287, 1362
ErhI	CCWWGG	2 cut(s)	813, 1991
FaeI	CATG	9 cut(s)	257, 461, 590, 656, 1049, 1083, 1328, 1560, 1995
FalI	AAGNNNNNCTT	2 cut(s)	1324, 1356
FaqI	GGGAC	3 cut(s)	725, 779, 803
FatI	CATG	9 cut(s)	253, 457, 586, 652, 1045, 1079, 1324, 1556, 1991
FauI	CCCGC	1 cut(s)	367
FauNDI	CATATG	1 cut(s)	901
FblI	GTMKAC	1 cut(s)	1076
FokI	GGATG	6 cut(s)	100, 108, 337, 590, 1151, 1586
FriOI	GRGCYC	3 cut(s)	380, 1287, 1362
FspBI	CTAG	3 cut(s)	419, 878, 1734
GsuI	CTGGAG	4 cut(s)	432, 1161, 1369, 1587
HaeIII	GGCC	4 cut(s)	445, 1126, 1462, 1892
HapII	CCGG	4 cut(s)	125, 1105, 1866, 1889
HgaI	GACGC	2 cut(s)	303, 776
Hin1II	CATG	9 cut(s)	257, 461, 590, 656, 1049, 1083, 1328, 1560, 1995
HincII	GTYRAC	5 cut(s)	22, 571, 1306, 1906, 1987
HindII	GTYRAC	5 cut(s)	22, 571, 1306, 1906, 1987
HindIII	AAGCTT	1 cut(s)	1977
HinfI	GANTC	6 cut(s)	422, 1073, 1208, 1544, 1724, 1873
HpaI	GTTAAC	1 cut(s)	1987
HpaII	CCGG	4 cut(s)	125, 1105, 1866, 1889
HphI	GGTGA	2 cut(s)	881, 1186
Hpy166II	GTNNAC	8 cut(s)	22, 241, 571, 1077, 1306, 1439, 1906, 1987
Hpy188I	TCNGA	8 cut(s)	264, 309, 355, 1057, 1207, 1213, 1357, 1818
Hpy8I	GTNNAC	8 cut(s)	22, 241, 571, 1077, 1306, 1439, 1906, 1987
Hpy99I	CGWCG	3 cut(s)	83, 113, 319
HpyAV	CCTTC	9 cut(s)	338, 610, 704, 962, 1223, 1297, 1427, 1442, 1925
HpyCH4III	ACNGT	4 cut(s)	26, 288, 596, 1781
HpyCH4IV	ACGT	2 cut(s)	1674, 1832
HpyCH4V	TGCA	9 cut(s)	512, 583, 782, 848, 860, 995, 1344, 1679, 1838
HpyF10VI	GCNNNNNNNGC	6 cut(s)	212, 368, 380, 512, 1178, 1961
HpyF3I	CTNAG	2 cut(s)	1112, 1726
HpySE526I	ACGT	2 cut(s)	1674, 1832
Hsp92II	CATG	9 cut(s)	257, 461, 590, 656, 1049, 1083, 1328, 1560, 1995
Kpn2I	TCCGGA	1 cut(s)	124
KspAI	GTTAAC	1 cut(s)	1987
KspI	CCGCGG	1 cut(s)	375
Kzo9I	GATC	8 cut(s)	115, 259, 347, 619, 871, 1321, 1352, 1394
LmnI	GCTCC	8 cut(s)	168, 284, 713, 719, 1177, 1571, 1741, 1891
Lsp1109I	GCAGC	6 cut(s)	55, 160, 346, 524, 850, 872
LweI	GCATC	3 cut(s)	592, 847, 1353
MaeI	CTAG	3 cut(s)	419, 878, 1734
MaeII	ACGT	2 cut(s)	1674, 1832
MaeIII	GTNAC	3 cut(s)	590, 892, 1729
MalI	GATC	8 cut(s)	117, 261, 349, 621, 873, 1323, 1354, 1396
MboI	GATC	8 cut(s)	115, 259, 347, 619, 871, 1321, 1352, 1394
MboII	GAAGA	7 cut(s)	26, 61, 230, 628, 1044, 1259, 1522
MflI	RGATCY	1 cut(s)	619
MhlI	GDGCHC	4 cut(s)	380, 1287, 1362, 1888
MlsI	TGGCCA	1 cut(s)	1126
MluNI	TGGCCA	1 cut(s)	1126
MlyI	GAGTC	2 cut(s)	1082, 1718
Mox20I	TGGCCA	1 cut(s)	1126
MroI	TCCGGA	1 cut(s)	124
MroXI	GAANNNNTTC	1 cut(s)	1514
MscI	TGGCCA	1 cut(s)	1126
MslI	CAYNNNNRTG	5 cut(s)	389, 651, 1555, 1913, 1996
Msp20I	TGGCCA	1 cut(s)	1126
MspA1I	CMGCKG	3 cut(s)	173, 374, 863
MspI	CCGG	4 cut(s)	125, 1105, 1866, 1889
MspR9I	CCNGG	6 cut(s)	450, 745, 1566, 1604, 1667, 1867
MvaI	CCWGG	5 cut(s)	450, 745, 1566, 1604, 1667
MvnI	CGCG	1 cut(s)	374
MwoI	GCNNNNNNNGC	6 cut(s)	212, 368, 380, 512, 1178, 1961
NciI	CCSGG	1 cut(s)	1867
NcoI	CCATGG	1 cut(s)	1991
NdeI	CATATG	1 cut(s)	901
NdeII	GATC	8 cut(s)	115, 259, 347, 619, 871, 1321, 1352, 1394
NlaIII	CATG	9 cut(s)	257, 461, 590, 656, 1049, 1083, 1328, 1560, 1995
NlaIV	GGNNCC	6 cut(s)	621, 791, 804, 1563, 1573, 1743
NmuCI	GTSAC	2 cut(s)	892, 1729
NspI	RCATGY	1 cut(s)	257
OliI	CACNNNNGTG	1 cut(s)	1913
PasI	CCCWGGG	1 cut(s)	744
PceI	AGGCCT	1 cut(s)	445
PciI	ACATGT	1 cut(s)	253
PcsI	WCGNNNNNNNCGW	1 cut(s)	951
PdmI	GAANNNNTTC	1 cut(s)	1514
PfeI	GAWTC	4 cut(s)	422, 1208, 1544, 1873
PflFI	GACNNNGTC	1 cut(s)	1727
PflMI	CCANNNNNTGG	2 cut(s)	799, 1469
PfoI	TCCNGGA	4 cut(s)	448, 1564, 1602, 1665
PleI	GAGTC	2 cut(s)	1081, 1718
PpsI	GAGTC	2 cut(s)	1081, 1718
PpuMI	RGGWCCY	1 cut(s)	1562
PscI	ACATGT	1 cut(s)	253
PshBI	ATTAAT	1 cut(s)	735
Psp124BI	GAGCTC	1 cut(s)	1362
Psp1406I	AACGTT	1 cut(s)	1674
Psp5II	RGGWCCY	1 cut(s)	1562
Psp6I	CCWGG	5 cut(s)	448, 743, 1564, 1602, 1665
PspGI	CCWGG	5 cut(s)	448, 743, 1564, 1602, 1665
PspN4I	GGNNCC	6 cut(s)	621, 791, 804, 1563, 1573, 1743
PspPI	GGNCC	3 cut(s)	790, 1232, 1562
PspPPI	RGGWCCY	1 cut(s)	1562
PstI	CTGCAG	1 cut(s)	850
PstNI	CAGNNNCTG	1 cut(s)	866
PsuI	RGATCY	1 cut(s)	619
PsyI	GACNNNGTC	1 cut(s)	1727
PvuII	CAGCTG	2 cut(s)	173, 863
RsaI	GTAC	4 cut(s)	77, 494, 598, 1778
RsaNI	GTAC	4 cut(s)	76, 493, 597, 1777
RseI	CAYNNNNRTG	5 cut(s)	389, 651, 1555, 1913, 1996
SacI	GAGCTC	1 cut(s)	1362
SacII	CCGCGG	1 cut(s)	375
Sau3AI	GATC	8 cut(s)	115, 259, 347, 619, 871, 1321, 1352, 1394
Sau96I	GGNCC	3 cut(s)	790, 1232, 1562
SchI	GAGTC	2 cut(s)	1082, 1718
ScrFI	CCNGG	6 cut(s)	450, 745, 1566, 1604, 1667, 1867
SduI	GDGCHC	4 cut(s)	380, 1287, 1362, 1888
SfaNI	GCATC	3 cut(s)	592, 847, 1353
SfcI	CTRYAG	2 cut(s)	846, 1754
Sfr303I	CCGCGG	1 cut(s)	375
SgrBI	CCGCGG	1 cut(s)	375
SinI	GGWCC	3 cut(s)	790, 1232, 1562
SmiMI	CAYNNNNRTG	5 cut(s)	389, 651, 1555, 1913, 1996
SmlI	CTYRAG	4 cut(s)	983, 1198, 1256, 1640
SmoI	CTYRAG	4 cut(s)	983, 1198, 1256, 1640
SpeI	ACTAGT	1 cut(s)	1733
SseBI	AGGCCT	1 cut(s)	445
SspI	AATATT	1 cut(s)	1786
SspMI	CTAG	3 cut(s)	419, 878, 1734
SstI	GAGCTC	1 cut(s)	1362
StuI	AGGCCT	1 cut(s)	445
StyD4I	CCNGG	6 cut(s)	448, 743, 1564, 1602, 1665, 1865
StyI	CCWWGG	2 cut(s)	813, 1991
TaaI	ACNGT	4 cut(s)	26, 288, 596, 1781
TaiI	ACGT	2 cut(s)	1677, 1835
TaqI	TCGA	3 cut(s)	317, 1292, 1371
TatI	WGTACW	1 cut(s)	492
TauI	GCSGC	4 cut(s)	374, 1388, 1577, 1958
TfiI	GAWTC	4 cut(s)	422, 1208, 1544, 1873
TseFI	GTSAC	2 cut(s)	892, 1729
TseI	GCWGC	6 cut(s)	43, 173, 359, 512, 860, 863
Tsp45I	GTSAC	2 cut(s)	892, 1729
TspDTI	ATGAA	6 cut(s)	357, 546, 635, 1155, 1469, 1706
TspGWI	ACGGA	3 cut(s)	313, 960, 1323
Tth111I	GACNNNGTC	1 cut(s)	1727
Van91I	CCANNNNNTGG	2 cut(s)	799, 1469
VpaK11BI	GGWCC	3 cut(s)	790, 1232, 1562
VspI	ATTAAT	1 cut(s)	735
XapI	RAATTY	3 cut(s)	320, 558, 997
XceI	RCATGY	1 cut(s)	257
XmiI	GTMKAC	1 cut(s)	1076
XmnI	GAANNNNTTC	1 cut(s)	1514
XspI	CTAG	3 cut(s)	419, 878, 1734

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.