MD07G1013200.v1.1

Cation H( ) antiporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0014942
Physical Location & Seq
Reverse (-)
1170376 .. 1174305
3930 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1013200.v1.1.491

Sequence Viewer

Length: 2286 bp
ATGTATGCTCTCTGCAATGTTTCCCACTTCCTGTTAAAGCCGTATTCTCAGCCTCGCATTACCTCCGACACCGTTATAGGACTGCTGATCGGAAACTTAGGGTTCATACGCAACCTAGTAACGGATTCAGCCAGGAAAACGTTGAATTTTATTGTTGATTTCGGCATGATCTGCTATATGTTTGTTTTAGGCATAGAAATGGATCCATATGTACTTTTTAAAGAACCGACCAAGGATGCTAAAGTGGCCTATGGTGGTATGCTTTCCACATTCATCCTAGCCTGCGCTATAACACCATTTCTGCAGTTTACAGATGGCGGTTTCAAGGTTGACTTCACTCTCTCCCTCTCCACCGTTCTCTCTAGCACCGCCTCTCCTGTACTGACACGTCTCATAACGAGTCTCAAAATAGGCAAGTCGGACATAGGCCAGCTAGTCATTTCTGCAGGAATGCACGCTGATTTTGTATCCACTCTTCTCCTCTCAATTGGCTATGTCTTTTGGCCAGTTGATTCTGGAGGTAAAGTTGTAGAGACTTCAAAACGCGTCCGAAGATCCATTGAGATGGGTTCTGCATTGGTGATCCAGACACTTTTTGCGGGCTATGTTTCACCAATCTTCATGAACTGGGTCAACAACGAAAACCCCGAAGGCAAACCCATCAAAGGTTCACATCTAGTGCTTGCTCTTGCTTTCATGGCCTTGATCATTTCCTGCTCACCAATTTATGGATACAATCCGGCCTTGAGTGCATTTATGGCAGGAACCTTTTTACCAAAGGGGGGGAGAGTATCGAAATGGGTGATCGGCAAGATCAATTACTTGTTATCTACCATTTACTATCCAATTTTTTTCTTCTGGATGGGTTATGAAGCTGCGTTCAAGGAATTTCAACCCGGACAGTTCGGGACATGGGCAAGGTTATTTGTACTTTTTGGTATAGCAACAGTAGGAAAAGTTGCTGGAACTGTCCTCTGCGGAAAGCTGTTGGGGTTTCACTGGCCGGAATCTATTGCACTCGGGCTTCTGCTCACTACCAAAGGCCATTTTCACATATACTTGGCCATTGCTGCAAAACAAGCCGGGAAAACATCTACTTCAACCAGTACCGTGATGGTAATAGCTATATTTTTCACGGTTGTGCATGCCCCATCAGTTGTGGCACAAATCATCAAGCGTGCAAGGAAACGAGCACCTACTCATCGAATGTCACTTCAGTTGCTTGACCCTTCAAGCGAACTCCGCATATTACTATGCCTTCATGGGCCTCAAAATGTTCAAACTATGATAAACTTCATTGAGATATCTAGAGGGACAGCTGACCCTGGAATTGTGGTATATGTAACAGACATGATAGAACTCACAGACGAAATTGCTGCCACACTGGTAAAAGAAGAAGGGGCGGACACCATGACAGTGACTCACACAGGAGTGAAAGAAATGAGAGATCAAGTCACTGCTGCAGTTCAAGCATATGTAGGTGAGAGTGGAGATGGTATCACACTTAGACGATTGCTTGCACTTTCGACTTTCAGTGGCATGCCCCAGGATATTTGCATTTTGGCAGAGGACTCAATGGTAGGCCTCATCATCTTGCCATTTCACAAGGTTCAACGCGCAGATGGAACATTGGATAACGGAAATTCTGCTTTCAGATATGTGAACCGTAAGATCCTCAAGAATGCTCCGTGCTCCGTCGGGATTCTTGTAGACAGAGGTCTTGGACTGATTGAAAAACTACCAAGAACACACGATCATTCTGTCAGCATGGCAGTCATCTTCATTGGTGGCAAAGACGATAGAGAAGCACTTGCCTATGCTGGTCGCGTAGCACGACATGCAGGTGTAAAGCTCACAGTCATAAGATTCTTGGTAGATGCTAGCTCAGAGGCCACAGTGAGACCTGGAAATTACACTGTCAGCCGTTCTGAGCAAGAAGAGGAAATGAAGCTTGACGATGAGTGTTTCGCAAGCTTCTATGAGAGACGTATAGCATGTGGACAAGTCGCTTACGTTGAGAAGCATATGGCCAATTCTGCTGAGACCTATTCTACCTTGAGGGAGTTGGACGGGCAGTACGCGCTCATTATAGTGGGACGAGGGGAAAGGGTGAATTCGGTTCTGACATTTGGGATGAATGACTGGCAGCAATGTCCGGAGTTGGGGCCAATCGGGGATGTCCTTTCGGGCTCTGATTTCTCGGTTAAAACCTCAGTTTTGATCATCCAAGAAAACAGTCTAAAAGGACAACTAGACGGGCTTGAAGATGACTTCTCGATCATGTAA

Protein Analysis

762

Amino Acids

83.29

Weight (kDa)

7.22

Isoelectric Point (pI)

31.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 11 - 391 7.4e-36 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 444 - 575 6.7e-14 Plant cation/H(+) antiporter domain
CHX17_C PF23259 587 - 745 2.3e-14 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014942)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52080
fragaria_vesca FvH4_7g01210 FvH4_7g01210
malus_domestica MD02G1308800.v1.1 MD07G1013200.v1.1
prunus_persica Prupe.2G016700_v2.0.a1 Prupe.2G016700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0316681
rosa_laevigata RLG00000030644
rosa_multiflora Rmu_sc0005539.1_g000005
rosa_roxburghii Rroxscaffold_4G00330860
rosa_samantha Rh1AG022700 Rh1BG021200 Rh1CG019800 Rh1DG017200
rosa_wichuraiana Rw1G001460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1832
Acc36I ACCTGC 1 cut(s) 1832
AccB7I CCANNNNNTGG 1 cut(s) 728
AccI GTMKAC 1 cut(s) 1710
AccII CGCG 4 cut(s) 546, 1617, 1827, 2081
AccIII TCCGGA 1 cut(s) 2155
AciI CCGC 6 cut(s) 318, 369, 599, 978, 1243, 1403
AclI AACGTT 1 cut(s) 140
AclWI GGATC 5 cut(s) 197, 210, 549, 577, 1666
AcoI YGGCCR 4 cut(s) 503, 1001, 1062, 2028
AcsI RAATTY 4 cut(s) 145, 887, 1642, 2113
AcuI CTGAAG 1 cut(s) 1199
AfaI GTAC 5 cut(s) 213, 381, 930, 1108, 2078
AfiI CCNNNNNNNGG 5 cut(s) 121, 665, 728, 782, 2162
AflIII ACRYGT 2 cut(s) 386, 544
AjiI CACGTC 1 cut(s) 389
AjnI CCWGG 4 cut(s) 131, 1324, 1545, 1903
AleI CACNNNNGTG 2 cut(s) 1139, 1430
AluBI AGCT 9 cut(s) 433, 875, 985, 1124, 1319, 1852, 1884, 1951, 1974
AluI AGCT 9 cut(s) 433, 875, 985, 1124, 1319, 1852, 1884, 1951, 1974
Alw21I GWGCWC 2 cut(s) 1195, 1694
Alw26I GTCTC 6 cut(s) 395, 407, 527, 1894, 1978, 2036
AlwI GGATC 5 cut(s) 197, 210, 549, 577, 1666
Ama87I CYCGRG 1 cut(s) 1019
Aor13HI TCCGGA 1 cut(s) 2155
ApeKI GCWGC 5 cut(s) 875, 1070, 1376, 1460, 2146
ApoI RAATTY 4 cut(s) 145, 887, 1642, 2113
AspLEI GCGC 3 cut(s) 287, 1619, 2083
AspS9I GGNCC 2 cut(s) 1265, 2165
AsuC2I CCSGG 2 cut(s) 897, 1084
AsuHPI GGTGA 6 cut(s) 592, 603, 711, 814, 1493, 2122
AsuNHI GCTAGC 1 cut(s) 1880
AvaI CYCGRG 1 cut(s) 1019
BalI TGGCCA 3 cut(s) 505, 1064, 2030
BamHI GGATCC 1 cut(s) 202
BanII GRGCYC 1 cut(s) 2192
BarI GAAGNNNNNNTAC 2 cut(s) 459, 491
Bbv12I GWGCWC 2 cut(s) 1195, 1694
BbvI GCAGC 5 cut(s) 862, 1057, 1363, 1447, 2158
BccI CCATC 8 cut(s) 308, 559, 668, 856, 1108, 1159, 1487, 1616
BceAI ACGGC 2 cut(s) 25, 1908
BcgI CGANNNNNNTGC 2 cut(s) 1358, 1392
BciT130I CCWGG 4 cut(s) 133, 1326, 1547, 1905
BciVI GTATCC 2 cut(s) 478, 725
BclI TGATCA 2 cut(s) 705, 2220
BcnI CCSGG 2 cut(s) 897, 1084
BcoDI GTCTC 6 cut(s) 395, 407, 527, 1894, 1978, 2036
BfaI CTAG 8 cut(s) 116, 278, 363, 434, 677, 1308, 1881, 2252
BfmI CTRYAG 3 cut(s) 302, 444, 1461
BfuAI ACCTGC 1 cut(s) 1832
BfuI GTATCC 2 cut(s) 478, 725
BisI GCNGC 5 cut(s) 876, 1071, 1377, 1461, 2147
BlsI GCNGC 5 cut(s) 877, 1072, 1378, 1462, 2148
Bme1390I CCNGG 6 cut(s) 133, 897, 1084, 1326, 1547, 1905
BmeT110I CYCGRG 1 cut(s) 1019
BmgBI CACGTC 1 cut(s) 389
BmgT120I GGNCC 2 cut(s) 1265, 2165
BmiI GGNNCC 3 cut(s) 204, 766, 2166
BmrFI CCNGG 6 cut(s) 133, 897, 1084, 1326, 1547, 1905
BmrI ACTGGG 1 cut(s) 637
BmsI GCATC 2 cut(s) 226, 1867
BmtI GCTAGC 1 cut(s) 1884
BmuI ACTGGG 1 cut(s) 637
BoxI GACNNNNGTC 1 cut(s) 1716
BpmI CTGGAG 1 cut(s) 537
BpuEI CTTGAG 3 cut(s) 766, 1661, 2077
BpuMI CCSGG 2 cut(s) 897, 1084
BsaI GGTCTC 2 cut(s) 1894, 2036
BsaJI CCNNGG 3 cut(s) 231, 1324, 1545
BsaWI WCCGGW 1 cut(s) 2155
BsaXI ACNNNNNCTCC 4 cut(s) 358, 388, 510, 540
Bsc4I CCNNNNNNNGG 5 cut(s) 121, 665, 728, 782, 2162
Bse1I ACTGG 6 cut(s) 506, 632, 1004, 1104, 1389, 2147
Bse3DI GCAATG 3 cut(s) 22, 1065, 2156
BseAI TCCGGA 1 cut(s) 2155
BseBI CCWGG 4 cut(s) 133, 1326, 1547, 1905
BseDI CCNNGG 3 cut(s) 231, 1324, 1545
BseGI GGATG 6 cut(s) 241, 273, 867, 2139, 2182, 2223
BseLI CCNNNNNNNGG 5 cut(s) 121, 665, 728, 782, 2162
BseMI GCAATG 3 cut(s) 22, 1065, 2156
BseMII CTCAG 5 cut(s) 62, 1899, 1920, 2031, 2226
BseNI ACTGG 6 cut(s) 506, 632, 1004, 1104, 1389, 2147
BseRI GAGGAG 1 cut(s) 470
BseXI GCAGC 5 cut(s) 862, 1057, 1363, 1447, 2158
Bsh1236I CGCG 4 cut(s) 546, 1617, 1827, 2081
BsiHKAI GWGCWC 2 cut(s) 1195, 1694
BsiHKCI CYCGRG 1 cut(s) 1019
BsiSI CCGG 5 cut(s) 740, 897, 1004, 1083, 2156
BslFI GGGAC 3 cut(s) 922, 1327, 2109
BslI CCNNNNNNNGG 5 cut(s) 121, 665, 728, 782, 2162
BsmAI GTCTC 6 cut(s) 395, 407, 527, 1894, 1978, 2036
BsmBI CGTCTC 2 cut(s) 395, 1978
BsmFI GGGAC 3 cut(s) 922, 1327, 2109
BsmI GAATGC 2 cut(s) 456, 1687
Bso31I GGTCTC 2 cut(s) 1894, 2036
BsoBI CYCGRG 1 cut(s) 1019
Bsp1286I GDGCHC 3 cut(s) 1195, 1694, 2192
Bsp13I TCCGGA 1 cut(s) 2155
BspACI CCGC 6 cut(s) 318, 369, 599, 978, 1243, 1403
BspCNI CTCAG 5 cut(s) 61, 1898, 1921, 2032, 2225
BspEI TCCGGA 1 cut(s) 2155
BspFNI CGCG 4 cut(s) 546, 1617, 1827, 2081
BspHI TCATGA 1 cut(s) 621
BspLI GGNNCC 3 cut(s) 204, 766, 2166
BspMAI CTGCAG 3 cut(s) 306, 448, 1465
BspMI ACCTGC 1 cut(s) 1832
BspOI GCTAGC 1 cut(s) 1884
BspPI GGATC 5 cut(s) 197, 210, 549, 577, 1666
BspTNI GGTCTC 2 cut(s) 1894, 2036
BsrDI GCAATG 3 cut(s) 22, 1065, 2156
BsrI ACTGG 6 cut(s) 506, 632, 1004, 1104, 1389, 2147
BssECI CCNNGG 3 cut(s) 231, 1324, 1545
BssT1I CCWWGG 1 cut(s) 231
Bst2UI CCWGG 4 cut(s) 133, 1326, 1547, 1905
Bst6I CTCTTC 2 cut(s) 480, 1932
BstAPI GCANNNNNTGC 2 cut(s) 171, 1838
BstDEI CTNAG 7 cut(s) 48, 97, 1505, 1885, 1929, 2040, 2212
BstF5I GGATG 6 cut(s) 241, 273, 867, 2139, 2182, 2223
BstFNI CGCG 4 cut(s) 546, 1617, 1827, 2081
BstHHI GCGC 3 cut(s) 287, 1619, 2083
BstMAI GTCTC 6 cut(s) 395, 407, 527, 1894, 1978, 2036
BstNI CCWGG 4 cut(s) 133, 1326, 1547, 1905
BstNSI RCATGY 4 cut(s) 1148, 1543, 1841, 1998
BstPAI GACNNNNGTC 1 cut(s) 1716
BstSCI CCNGG 6 cut(s) 131, 895, 1082, 1324, 1545, 1903
BstSFI CTRYAG 3 cut(s) 302, 444, 1461
BstUI CGCG 4 cut(s) 546, 1617, 1827, 2081
BstV1I GCAGC 5 cut(s) 862, 1057, 1363, 1447, 2158
BstX2I RGATCY 3 cut(s) 202, 554, 1671
BstXI CCANNNNNNTGG 1 cut(s) 565
BstYI RGATCY 3 cut(s) 202, 554, 1671
BsuI GTATCC 2 cut(s) 478, 725
BtrI CACGTC 1 cut(s) 389
BtsCI GGATG 6 cut(s) 241, 273, 867, 2139, 2182, 2223
BtsI GCAGTG 1 cut(s) 1455
BtsIMutI CAGTG 7 cut(s) 997, 1382, 1422, 1455, 1540, 1902, 1914
BveI ACCTGC 1 cut(s) 1832
CciI TCATGA 1 cut(s) 621
CfoI GCGC 3 cut(s) 287, 1619, 2083
Cfr13I GGNCC 2 cut(s) 1265, 2165
CseI GACGC 1 cut(s) 535
Csp6I GTAC 5 cut(s) 212, 380, 929, 1107, 2077
CviQI GTAC 5 cut(s) 212, 380, 929, 1107, 2077
DdeI CTNAG 7 cut(s) 48, 97, 1505, 1885, 1929, 2040, 2212
DraI TTTAAA 1 cut(s) 220
EaeI YGGCCR 4 cut(s) 503, 1001, 1062, 2028
Eam1104I CTCTTC 2 cut(s) 480, 1932
EarI CTCTTC 2 cut(s) 480, 1932
EciI GGCGGA 1 cut(s) 1418
Eco130I CCWWGG 1 cut(s) 231
Eco147I AGGCCT 1 cut(s) 1584
Eco24I GRGCYC 1 cut(s) 2192
Eco31I GGTCTC 2 cut(s) 1894, 2036
Eco32I GATATC 1 cut(s) 1305
Eco57I CTGAAG 1 cut(s) 1199
Eco88I CYCGRG 1 cut(s) 1019
EcoRI GAATTC 1 cut(s) 2113
EcoRII CCWGG 4 cut(s) 131, 1324, 1545, 1903
EcoRV GATATC 1 cut(s) 1305
EcoT14I CCWWGG 1 cut(s) 231
EcoT38I GRGCYC 1 cut(s) 2192
ErhI CCWWGG 1 cut(s) 231
Esp3I CGTCTC 2 cut(s) 395, 1978
FalI AAGNNNNNCTT 2 cut(s) 317, 349
FaqI GGGAC 3 cut(s) 922, 1327, 2109
FauI CCCGC 1 cut(s) 592
FauNDI CATATG 3 cut(s) 208, 1474, 2025
FbaI TGATCA 2 cut(s) 705, 2220
FblI GTMKAC 1 cut(s) 1710
Fnu4HI GCNGC 5 cut(s) 876, 1071, 1377, 1461, 2147
FokI GGATG 6 cut(s) 248, 260, 874, 2146, 2189, 2210
FriOI GRGCYC 1 cut(s) 2192
Fsp4HI GCNGC 5 cut(s) 876, 1071, 1377, 1461, 2147
FspBI CTAG 8 cut(s) 116, 278, 363, 434, 677, 1308, 1881, 2252
GlaI GCGC 3 cut(s) 286, 1618, 2082
GluI GCNGC 5 cut(s) 876, 1071, 1377, 1461, 2147
GsuI CTGGAG 1 cut(s) 537
HapII CCGG 5 cut(s) 740, 897, 1004, 1083, 2156
HgaI GACGC 1 cut(s) 535
HhaI GCGC 3 cut(s) 287, 1619, 2083
Hin6I GCGC 3 cut(s) 285, 1617, 2081
HinP1I GCGC 3 cut(s) 285, 1617, 2081
HincII GTYRAC 2 cut(s) 331, 634
HindII GTYRAC 2 cut(s) 331, 634
HindIII AAGCTT 2 cut(s) 1949, 1972
HinfI GANTC 8 cut(s) 125, 400, 512, 1007, 1420, 1571, 1702, 1866
HpaII CCGG 5 cut(s) 740, 897, 1004, 1083, 2156
HphI GGTGA 6 cut(s) 592, 603, 711, 814, 1493, 2122
Hpy166II GTNNAC 7 cut(s) 309, 331, 634, 671, 1663, 1711, 2000
Hpy188I TCNGA 9 cut(s) 67, 92, 421, 551, 1655, 1888, 1930, 2124, 2194
Hpy8I GTNNAC 7 cut(s) 309, 331, 634, 671, 1663, 1711, 2000
Hpy99I CGWCG 1 cut(s) 1700
HpyAV CCTTC 4 cut(s) 644, 1239, 1268, 1391
HpyCH4IV ACGT 4 cut(s) 140, 388, 1987, 2013
HpyF3I CTNAG 7 cut(s) 48, 97, 1505, 1885, 1929, 2040, 2212
HpySE526I ACGT 4 cut(s) 140, 388, 1987, 2013
HspAI GCGC 3 cut(s) 285, 1617, 2081
Kpn2I TCCGGA 1 cut(s) 2155
Ksp22I TGATCA 2 cut(s) 705, 2220
LmnI GCTCC 2 cut(s) 1690, 1697
Lsp1109I GCAGC 5 cut(s) 862, 1057, 1363, 1447, 2158
LweI GCATC 2 cut(s) 226, 1867
MaeI CTAG 8 cut(s) 116, 278, 363, 434, 677, 1308, 1881, 2252
MaeII ACGT 4 cut(s) 140, 388, 1987, 2013
MaeIII GTNAC 5 cut(s) 118, 1209, 1342, 1417, 1453
MboII GAAGA 8 cut(s) 467, 564, 610, 847, 1406, 1771, 1949, 2276
MfeI CAATTG 1 cut(s) 486
MflI RGATCY 3 cut(s) 202, 554, 1671
MhlI GDGCHC 3 cut(s) 1195, 1694, 2192
MlsI TGGCCA 3 cut(s) 505, 1064, 2030
MluI ACGCGT 1 cut(s) 544
MluNI TGGCCA 3 cut(s) 505, 1064, 2030
MlyI GAGTC 3 cut(s) 409, 1414, 1565
MmeI TCCRAC 3 cut(s) 90, 399, 2046
Mox20I TGGCCA 3 cut(s) 505, 1064, 2030
MroI TCCGGA 1 cut(s) 2155
MscI TGGCCA 3 cut(s) 505, 1064, 2030
MseI TTAA 3 cut(s) 35, 219, 2205
MslI CAYNNNNRTG 7 cut(s) 197, 563, 1139, 1415, 1430, 1842, 2090
Msp20I TGGCCA 3 cut(s) 505, 1064, 2030
MspA1I CMGCKG 1 cut(s) 1319
MspI CCGG 5 cut(s) 740, 897, 1004, 1083, 2156
MspR9I CCNGG 6 cut(s) 133, 897, 1084, 1326, 1547, 1905
MunI CAATTG 1 cut(s) 486
Mva1269I GAATGC 2 cut(s) 456, 1687
MvaI CCWGG 4 cut(s) 133, 1326, 1547, 1905
MvnI CGCG 4 cut(s) 546, 1617, 1827, 2081
NciI CCSGG 2 cut(s) 897, 1084
NdeI CATATG 3 cut(s) 208, 1474, 2025
NheI GCTAGC 1 cut(s) 1880
NlaIV GGNNCC 3 cut(s) 204, 766, 2166
NmuCI GTSAC 3 cut(s) 1209, 1417, 1453
NspI RCATGY 4 cut(s) 1148, 1543, 1841, 1998
OliI CACNNNNGTG 2 cut(s) 1139, 1430
PaeI GCATGC 2 cut(s) 1148, 1543
PagI TCATGA 1 cut(s) 621
PaqCI CACCTGC 1 cut(s) 1832
PceI AGGCCT 1 cut(s) 1584
PcsI WCGNNNNNNNCGW 2 cut(s) 645, 1831
PctI GAATGC 2 cut(s) 456, 1687
PfeI GAWTC 5 cut(s) 125, 512, 1007, 1702, 1866
PflMI CCANNNNNTGG 1 cut(s) 728
PkrI GCNGC 5 cut(s) 877, 1072, 1378, 1462, 2148
PleI GAGTC 3 cut(s) 408, 1414, 1565
PpsI GAGTC 3 cut(s) 408, 1414, 1565
PshAI GACNNNNGTC 1 cut(s) 1716
Psp1406I AACGTT 1 cut(s) 140
Psp6I CCWGG 4 cut(s) 131, 1324, 1545, 1903
PspGI CCWGG 4 cut(s) 131, 1324, 1545, 1903
PspN4I GGNNCC 3 cut(s) 204, 766, 2166
PspPI GGNCC 2 cut(s) 1265, 2165
PstI CTGCAG 3 cut(s) 306, 448, 1465
PsuI RGATCY 3 cut(s) 202, 554, 1671
PvuII CAGCTG 1 cut(s) 1319
RsaI GTAC 5 cut(s) 213, 381, 930, 1108, 2078
RsaNI GTAC 5 cut(s) 212, 380, 929, 1107, 2077
RseI CAYNNNNRTG 7 cut(s) 197, 563, 1139, 1415, 1430, 1842, 2090
SaqAI TTAA 3 cut(s) 35, 219, 2205
SatI GCNGC 5 cut(s) 876, 1071, 1377, 1461, 2147
Sau96I GGNCC 2 cut(s) 1265, 2165
SchI GAGTC 3 cut(s) 409, 1414, 1565
ScrFI CCNGG 6 cut(s) 133, 897, 1084, 1326, 1547, 1905
SduI GDGCHC 3 cut(s) 1195, 1694, 2192
SfaNI GCATC 2 cut(s) 226, 1867
SfcI CTRYAG 3 cut(s) 302, 444, 1461
SmiMI CAYNNNNRTG 7 cut(s) 197, 563, 1139, 1415, 1430, 1842, 2090
SmlI CTYRAG 3 cut(s) 745, 1676, 2056
SmoI CTYRAG 3 cut(s) 745, 1676, 2056
SphI GCATGC 2 cut(s) 1148, 1543
SseBI AGGCCT 1 cut(s) 1584
SsiI CCGC 6 cut(s) 318, 369, 599, 978, 1243, 1403
SspMI CTAG 8 cut(s) 116, 278, 363, 434, 677, 1308, 1881, 2252
StuI AGGCCT 1 cut(s) 1584
StyD4I CCNGG 6 cut(s) 131, 895, 1082, 1324, 1545, 1903
StyI CCWWGG 1 cut(s) 231
TaiI ACGT 4 cut(s) 143, 391, 1990, 2016
TaqI TCGA 4 cut(s) 794, 1204, 1526, 2276
TatI WGTACW 3 cut(s) 211, 379, 928
TfiI GAWTC 5 cut(s) 125, 512, 1007, 1702, 1866
Tru1I TTAA 3 cut(s) 35, 219, 2205
Tru9I TTAA 3 cut(s) 35, 219, 2205
TscAI CASTG 7 cut(s) 1004, 1389, 1422, 1462, 1540, 1902, 1921
TseFI GTSAC 3 cut(s) 1209, 1417, 1453
TseI GCWGC 5 cut(s) 875, 1070, 1376, 1460, 2146
Tsp45I GTSAC 3 cut(s) 1209, 1417, 1453
TspGWI ACGGA 4 cut(s) 137, 1653, 1677, 1684
TspRI CASTG 7 cut(s) 1004, 1389, 1422, 1462, 1540, 1902, 1921
Van91I CCANNNNNTGG 1 cut(s) 728
XapI RAATTY 4 cut(s) 145, 887, 1642, 2113
XbaI TCTAGA 1 cut(s) 1307
XceI RCATGY 4 cut(s) 1148, 1543, 1841, 1998
XcmI CCANNNNNNNNNTGG 1 cut(s) 1111
XmiI GTMKAC 1 cut(s) 1710
XspI CTAG 8 cut(s) 116, 278, 363, 434, 677, 1308, 1881, 2252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.