Rmu_sc0005539.1_g000005

Cation H( ) antiporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005539.1
OG0014942
Physical Location & Seq
Forward (+)
20156 .. 23419
3264 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005539.1_g000005.1.cds

Sequence Viewer

Length: 2073 bp
atggatccatatgtgcttgttagagcaccaaccaaagacgcgaaagtagcctatgctggtatgctcttcacattcgccctagcctgtggaataaccccatttctgaactatacagacggttttaagattgacttcactctctccctctccatggtcctctctagcacggcttcgcctgtactgacacgtatgataacaaatctcaaaataggcaagtctgacataggccagcttgtcattgctactggaatgcattctgattttatagccactcttctcctctcccttggctatgtcatttggcctgttcaagttgaagataaaaagcccaatgttcgcagatcccttcagatgggtgctgcattgttggtccagacaatttttacagccattgtttcaccagtcgtcatgaactgggtcaacaatgaaaaccccgaaggcaaacccatcaaaggttcacacctagtcctctctatggctttcatggcctttgttgtggcttgcccatcattttgggggtacagtgctattttgagtgcatttatggcaggaatctttctaccaagggaaggaagagtatcaaagtgggtaataggcaagatcaattacttgttaagtaccatattctatcccatatttttcttttggatggggtatgaagcttattttatggagtttcaacctcttgactggatgacatgggcaaggttatttatagtttttgctatagcaacaatcggaaaagttgctggaacaatggtctctggagcgttgttggggtttaactggcctgaatctgttgcactagggcttcttctcactaccaaaggccattttcatatatacttggctattgctgcaaaatcgtatgggaaaaccactacttcaaccagcactgtgatggtaatagctattttttttactgtggtgcacgccccatcagttgtggctcaaattattaagcgtgcaaggagacgggcacccactcatcggatgtcacttcagttgcttgaaccttcaagcgaactccgcatattgctatgccttcatgggccacaaaatttgcgtacaaccattaacttcattgagatatgtagagggacagcggaccctggaatcgtggtatttgtaacagacatgatagaactcacagaccaaatagcagccacactagttaaagaagaaggagtgaacacaatgactgtgactgacaaggcagtcacagacaggagagatcaagtcactgctgcagttcaagcctatgtcgaggaggatgaaactggtattacacttggacgattgcttgcactttcgactttcaatggcatgccccaagatatatgcattttggctgaggactcgatggtggccctcatcatattgccgtttcacaagacacaaggtgcagatgggacattagatggcggccattctggtttcagatatgtgaaccgaaaggtcctcagaaatgctccatgctccgtaggaattcttgtagacagaggttttggactgattgaaaaaatatcaagatctcatgatcattctatcgatatggcagtcatcttcattggtggaaaagatgatagagaagcacttgcttatgccggtcatgtagcacaacatcctggtgtaaaactcaccatcttaagatttttggtagacagtagctcggatgcctcaagtagacctagccattatcaggtcagtcgtgctctacaagaagaggaaatgaagcttgatgatgagtgctttgctaagttctacgagagacatgttgcaattgggcaagttgcttacatggagaagcatcttgccaattcttctgagacctataataccttgatgacattggatgggcagtactcacttattatagtgggaagaggggaaagggtgaatacagctttgacatttgggatgaatgactggcagaaatgtccggagttgggtccgatcggtgatgttctttcaggttctgaattttcagtcaaaacctcagttttgatcatccaacaaaacagtggaaaaggagaactagatggacttgatgatgacttttctgtcatgtaa

Protein Analysis

690

Amino Acids

75.94

Weight (kDa)

6.26

Isoelectric Point (pI)

35.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014942)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52080
fragaria_vesca FvH4_7g01210 FvH4_7g01210
malus_domestica MD02G1308800.v1.1 MD07G1013200.v1.1
prunus_persica Prupe.2G016700_v2.0.a1 Prupe.2G016700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0316681
rosa_laevigata RLG00000030644
rosa_multiflora Rmu_sc0005539.1_g000005
rosa_roxburghii Rroxscaffold_4G00330860
rosa_samantha Rh1AG022700 Rh1BG021200 Rh1CG019800 Rh1DG017200
rosa_wichuraiana Rw1G001460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1217, 2063
AccB1I GGYRCC 1 cut(s) 979
AccI GTMKAC 3 cut(s) 1497, 1662, 1687
AccII CGCG 1 cut(s) 41
AccIII TCCGGA 1 cut(s) 1942
AciI CCGC 3 cut(s) 1030, 1106, 1425
AclWI GGATC 2 cut(s) 12, 336
AcoI YGGCCR 1 cut(s) 1426
AcsI RAATTY 3 cut(s) 1060, 1488, 1982
AcuI CTGAAG 2 cut(s) 332, 986
AdeI CACNNNGTG 1 cut(s) 1403
AfaI GTAC 5 cut(s) 180, 521, 619, 1069, 1865
AfiI CCNNNNNNNGG 8 cut(s) 151, 352, 452, 475, 569, 990, 1702, 1949
AflII CTTAAG 1 cut(s) 1648
AflIII ACRYGT 2 cut(s) 185, 1774
AgsI TTSAA 9 cut(s) 311, 317, 680, 888, 1013, 1020, 1256, 1321, 1520
AhlI ACTAGT 1 cut(s) 1171
AjnI CCWGG 2 cut(s) 1111, 1627
AluBI AGCT 6 cut(s) 232, 662, 911, 1671, 1738, 1907
AluI AGCT 6 cut(s) 232, 662, 911, 1671, 1738, 1907
Alw21I GWGCWC 3 cut(s) 28, 933, 1717
Alw26I GTCTC 4 cut(s) 766, 967, 1765, 1823
Alw44I GTGCAC 1 cut(s) 929
AlwI GGATC 2 cut(s) 12, 336
AlwNI CAGNNNCTG 1 cut(s) 1979
Aor13HI TCCGGA 1 cut(s) 1942
AoxI GGCC 8 cut(s) 226, 302, 486, 788, 829, 1052, 1368, 1426
ApaLI GTGCAC 1 cut(s) 929
ApeKI GCWGC 4 cut(s) 359, 857, 1163, 1247
ApoI RAATTY 3 cut(s) 1060, 1488, 1982
ArsI GACNNNNNNTTYG 2 cut(s) 1490, 1522
Asp700I GAANNNNTTC 1 cut(s) 253
AspS9I GGNCC 7 cut(s) 154, 370, 1052, 1108, 1369, 1459, 1952
AsuHPI GGTGA 4 cut(s) 390, 1633, 1909, 1973
AvaII GGWCC 5 cut(s) 154, 370, 1108, 1459, 1952
BaeGI GKGCMC 2 cut(s) 933, 982
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 979
Bbv12I GWGCWC 3 cut(s) 28, 933, 1717
BbvCI CCTCAGC 1 cut(s) 1353
BbvI GCAGC 4 cut(s) 346, 844, 1175, 1234
BceAI ACGGC 2 cut(s) 183, 1369
BciT130I CCWGG 2 cut(s) 1113, 1629
BclI TGATCA 2 cut(s) 1540, 2007
BcoDI GTCTC 4 cut(s) 766, 967, 1765, 1823
BcuI ACTAGT 1 cut(s) 1171
BfaI CTAG 7 cut(s) 80, 162, 464, 806, 1172, 1692, 2039
BfmI CTRYAG 2 cut(s) 726, 1248
BfrI CTTAAG 1 cut(s) 1648
BglII AGATCT 1 cut(s) 1532
BisI GCNGC 5 cut(s) 360, 858, 1164, 1248, 1426
BlsI GCNGC 5 cut(s) 361, 859, 1165, 1249, 1427
BmcAI AGTACT 1 cut(s) 1865
Bme1390I CCNGG 2 cut(s) 1113, 1629
Bme18I GGWCC 5 cut(s) 154, 370, 1108, 1459, 1952
BmgT120I GGNCC 7 cut(s) 154, 370, 1052, 1108, 1369, 1459, 1952
BmiI GGNNCC 4 cut(s) 6, 981, 1110, 1953
BmrFI CCNGG 2 cut(s) 1113, 1629
BmrI ACTGGG 1 cut(s) 424
BmsI GCATC 2 cut(s) 1666, 1819
BmuI ACTGGG 1 cut(s) 424
BpmI CTGGAG 1 cut(s) 786
Bpu10I CCTNAGC 1 cut(s) 1353
BpuEI CTTGAG 1 cut(s) 1666
Bsa29I ATCGAT 1 cut(s) 1551
BsaAI YACGTR 1 cut(s) 188
BsaI GGTCTC 2 cut(s) 766, 1823
BsaJI CCNNGG 4 cut(s) 150, 286, 563, 1111
BsaWI WCCGGW 1 cut(s) 1942
Bsc4I CCNNNNNNNGG 8 cut(s) 151, 352, 452, 475, 569, 990, 1702, 1949
Bse118I RCCGGY 1 cut(s) 1607
Bse1I ACTGG 7 cut(s) 250, 401, 419, 695, 791, 1285, 1934
Bse3DI GCAATG 1 cut(s) 237
BseAI TCCGGA 1 cut(s) 1942
BseBI CCWGG 2 cut(s) 1113, 1629
BseCI ATCGAT 1 cut(s) 1551
BseDI CCNNGG 4 cut(s) 150, 286, 563, 1111
BseGI GGATG 9 cut(s) 654, 699, 999, 1279, 1624, 1681, 1861, 1926, 2010
BseLI CCNNNNNNNGG 8 cut(s) 151, 352, 452, 475, 569, 990, 1702, 1949
BseMI GCAATG 1 cut(s) 237
BseMII CTCAG 4 cut(s) 1344, 1477, 1818, 2013
BseNI ACTGG 7 cut(s) 250, 401, 419, 695, 791, 1285, 1934
BseRI GAGGAG 2 cut(s) 269, 1283
BseSI GKGCMC 2 cut(s) 933, 982
BseXI GCAGC 4 cut(s) 346, 844, 1175, 1234
BsgI GTGCAG 1 cut(s) 1425
Bsh1236I CGCG 1 cut(s) 41
Bsh1285I CGRYCG 1 cut(s) 1959
BshFI GGCC 8 cut(s) 228, 304, 488, 790, 831, 1054, 1370, 1428
BshNI GGYRCC 1 cut(s) 979
BshVI ATCGAT 1 cut(s) 1551
BsiEI CGRYCG 1 cut(s) 1959
BsiHKAI GWGCWC 3 cut(s) 28, 933, 1717
BsiSI CCGG 2 cut(s) 1608, 1943
BslFI GGGAC 2 cut(s) 1114, 1426
BslI CCNNNNNNNGG 8 cut(s) 151, 352, 452, 475, 569, 990, 1702, 1949
BsmAI GTCTC 4 cut(s) 766, 967, 1765, 1823
BsmBI CGTCTC 1 cut(s) 967
BsmFI GGGAC 2 cut(s) 1114, 1426
BsmI GAATGC 2 cut(s) 253, 255
BsnI GGCC 8 cut(s) 228, 304, 488, 790, 831, 1054, 1370, 1428
Bso31I GGTCTC 2 cut(s) 766, 1823
Bsp1286I GDGCHC 4 cut(s) 28, 933, 982, 1717
Bsp13I TCCGGA 1 cut(s) 1942
Bsp143I GATC 8 cut(s) 4, 341, 600, 1234, 1532, 1540, 1956, 2007
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 3 cut(s) 1030, 1106, 1425
BspANI GGCC 8 cut(s) 228, 304, 488, 790, 831, 1054, 1370, 1428
BspCNI CTCAG 4 cut(s) 1345, 1476, 1819, 2012
BspDI ATCGAT 1 cut(s) 1551
BspEI TCCGGA 1 cut(s) 1942
BspFNI CGCG 1 cut(s) 41
BspHI TCATGA 2 cut(s) 408, 1537
BspLI GGNNCC 4 cut(s) 6, 981, 1110, 1953
BspMAI CTGCAG 1 cut(s) 1252
BspPI GGATC 2 cut(s) 12, 336
BspQI GCTCTTC 1 cut(s) 71
BspT107I GGYRCC 1 cut(s) 979
BspTI CTTAAG 1 cut(s) 1648
BspTNI GGTCTC 2 cut(s) 766, 1823
BsrDI GCAATG 1 cut(s) 237
BsrFI RCCGGY 1 cut(s) 1607
BsrI ACTGG 7 cut(s) 250, 401, 419, 695, 791, 1285, 1934
BssAI RCCGGY 1 cut(s) 1607
BssECI CCNNGG 4 cut(s) 150, 286, 563, 1111
BssMI GATC 8 cut(s) 4, 341, 600, 1234, 1532, 1540, 1956, 2007
BssT1I CCWWGG 3 cut(s) 150, 286, 563
Bst2UI CCWGG 2 cut(s) 1113, 1629
Bst4CI ACNGT 7 cut(s) 119, 524, 898, 925, 1204, 1667, 2024
Bst6I CTCTTC 5 cut(s) 71, 279, 568, 1719, 1879
BstAFI CTTAAG 1 cut(s) 1648
BstBAI YACGTR 1 cut(s) 188
BstC8I GCNNGC 6 cut(s) 230, 502, 933, 966, 1305, 1328
BstDEI CTNAG 5 cut(s) 1353, 1463, 1758, 1827, 1999
BstDSI CCRYGG 1 cut(s) 150
BstF5I GGATG 9 cut(s) 654, 699, 999, 1279, 1624, 1681, 1861, 1926, 2010
BstFNI CGCG 1 cut(s) 41
BstKTI GATC 8 cut(s) 7, 344, 603, 1237, 1535, 1543, 1959, 2010
BstMAI GTCTC 4 cut(s) 766, 967, 1765, 1823
BstMBI GATC 8 cut(s) 4, 341, 600, 1234, 1532, 1540, 1956, 2007
BstMCI CGRYCG 1 cut(s) 1959
BstMWI GCNNNNNNNGC 6 cut(s) 47, 485, 545, 857, 1029, 1256
BstNI CCWGG 2 cut(s) 1113, 1629
BstNSI RCATGY 2 cut(s) 1330, 1778
BstSCI CCNGG 2 cut(s) 1111, 1627
BstSFI CTRYAG 2 cut(s) 726, 1248
BstSLI GKGCMC 2 cut(s) 933, 982
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 4 cut(s) 346, 844, 1175, 1234
BstX2I RGATCY 3 cut(s) 4, 341, 1532
BstXI CCANNNNNNTGG 1 cut(s) 513
BstYI RGATCY 3 cut(s) 4, 341, 1532
Bsu15I ATCGAT 1 cut(s) 1551
BsuRI GGCC 8 cut(s) 228, 304, 488, 790, 831, 1054, 1370, 1428
BsuTUI ATCGAT 1 cut(s) 1551
BtgI CCRYGG 1 cut(s) 150
BtsCI GGATG 9 cut(s) 654, 699, 999, 1279, 1624, 1681, 1861, 1926, 2010
BtsI GCAGTG 1 cut(s) 1242
BtsIMutI CAGTG 4 cut(s) 529, 894, 1242, 2029
Cac8I GCNNGC 6 cut(s) 230, 502, 933, 966, 1305, 1328
CaiI CAGNNNCTG 1 cut(s) 1979
CciI TCATGA 2 cut(s) 408, 1537
Cfr10I RCCGGY 1 cut(s) 1607
Cfr13I GGNCC 7 cut(s) 154, 370, 1052, 1108, 1369, 1459, 1952
ClaI ATCGAT 1 cut(s) 1551
CseI GACGC 1 cut(s) 47
Csp6I GTAC 5 cut(s) 179, 520, 618, 1068, 1864
CspCI CAANNNNNGTGG 2 cut(s) 1044, 1079
CviQI GTAC 5 cut(s) 179, 520, 618, 1068, 1864
DdeI CTNAG 5 cut(s) 1353, 1463, 1758, 1827, 1999
DpnI GATC 8 cut(s) 6, 343, 602, 1236, 1534, 1542, 1958, 2009
DpnII GATC 8 cut(s) 4, 341, 600, 1234, 1532, 1540, 1956, 2007
DraIII CACNNNGTG 1 cut(s) 1403
DrdI GACNNNNNNGTC 2 cut(s) 1217, 2063
DseDI GACNNNNNNGTC 2 cut(s) 1217, 2063
EaeI YGGCCR 1 cut(s) 1426
Eam1104I CTCTTC 5 cut(s) 71, 279, 568, 1719, 1879
EarI CTCTTC 5 cut(s) 71, 279, 568, 1719, 1879
Eco130I CCWWGG 3 cut(s) 150, 286, 563
Eco31I GGTCTC 2 cut(s) 766, 1823
Eco47I GGWCC 5 cut(s) 154, 370, 1108, 1459, 1952
Eco57I CTGAAG 2 cut(s) 332, 986
EcoO109I RGGNCCY 1 cut(s) 1459
EcoRI GAATTC 1 cut(s) 1488
EcoRII CCWGG 2 cut(s) 1111, 1627
EcoT14I CCWWGG 3 cut(s) 150, 286, 563
EcoT22I ATGCAT 2 cut(s) 255, 1346
ErhI CCWWGG 3 cut(s) 150, 286, 563
Esp3I CGTCTC 1 cut(s) 967
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FaqI GGGAC 2 cut(s) 1114, 1426
FauNDI CATATG 1 cut(s) 10
FbaI TGATCA 2 cut(s) 1540, 2007
FblI GTMKAC 3 cut(s) 1497, 1662, 1687
Fnu4HI GCNGC 5 cut(s) 360, 858, 1164, 1248, 1426
FokI GGATG 9 cut(s) 661, 706, 1006, 1286, 1611, 1688, 1868, 1933, 1997
Fsp4HI GCNGC 5 cut(s) 360, 858, 1164, 1248, 1426
FspBI CTAG 7 cut(s) 80, 162, 464, 806, 1172, 1692, 2039
GluI GCNGC 5 cut(s) 360, 858, 1164, 1248, 1426
GsuI CTGGAG 1 cut(s) 786
HaeIII GGCC 8 cut(s) 228, 304, 488, 790, 831, 1054, 1370, 1428
HapII CCGG 2 cut(s) 1608, 1943
HgaI GACGC 1 cut(s) 47
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HindIII AAGCTT 2 cut(s) 660, 1736
HinfI GANTC 4 cut(s) 552, 794, 1116, 1358
HpaII CCGG 2 cut(s) 1608, 1943
HphI GGTGA 4 cut(s) 390, 1633, 1909, 1973
Hpy166II GTNNAC 8 cut(s) 421, 458, 931, 1192, 1450, 1498, 1663, 1688
Hpy188III TCNNGA 7 cut(s) 373, 409, 686, 765, 1530, 1538, 1943
Hpy8I GTNNAC 8 cut(s) 421, 458, 931, 1192, 1450, 1498, 1663, 1688
HpyAV CCTTC 6 cut(s) 356, 431, 563, 1026, 1055, 1178
HpyCH4III ACNGT 7 cut(s) 119, 524, 898, 925, 1204, 1667, 2024
HpyCH4IV ACGT 1 cut(s) 187
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 485, 545, 857, 1029, 1256
HpyF3I CTNAG 5 cut(s) 1353, 1463, 1758, 1827, 1999
HpySE526I ACGT 1 cut(s) 187
Kpn2I TCCGGA 1 cut(s) 1942
Ksp22I TGATCA 2 cut(s) 1540, 2007
Kzo9I GATC 8 cut(s) 4, 341, 600, 1234, 1532, 1540, 1956, 2007
LguI GCTCTTC 1 cut(s) 71
LmnI GCTCC 3 cut(s) 767, 1477, 1484
Lsp1109I GCAGC 4 cut(s) 346, 844, 1175, 1234
LweI GCATC 2 cut(s) 1666, 1819
MaeI CTAG 7 cut(s) 80, 162, 464, 806, 1172, 1692, 2039
MaeII ACGT 1 cut(s) 187
MaeIII GTNAC 5 cut(s) 996, 1129, 1204, 1219, 1240
MalI GATC 8 cut(s) 6, 343, 602, 1236, 1534, 1542, 1958, 2009
MboI GATC 8 cut(s) 4, 341, 600, 1234, 1532, 1540, 1956, 2007
MfeI CAATTG 1 cut(s) 1782
MflI RGATCY 3 cut(s) 4, 341, 1532
MhlI GDGCHC 4 cut(s) 28, 933, 982, 1717
MluCI AATT 8 cut(s) 378, 604, 954, 1060, 1488, 1782, 1819, 1982
MlyI GAGTC 1 cut(s) 1352
MmeI TCCRAC 1 cut(s) 2038
Mph1103I ATGCAT 2 cut(s) 255, 1346
MroI TCCGGA 1 cut(s) 1942
MroXI GAANNNNTTC 1 cut(s) 253
MseI TTAA 7 cut(s) 123, 614, 783, 960, 1077, 1176, 1649
MslI CAYNNNNRTG 2 cut(s) 899, 1629
MspA1I CMGCKG 1 cut(s) 1106
MspCI CTTAAG 1 cut(s) 1648
MspI CCGG 2 cut(s) 1608, 1943
MspR9I CCNGG 2 cut(s) 1113, 1629
MunI CAATTG 1 cut(s) 1782
Mva1269I GAATGC 2 cut(s) 253, 255
MvaI CCWGG 2 cut(s) 1113, 1629
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 6 cut(s) 47, 485, 545, 857, 1029, 1256
NcoI CCATGG 1 cut(s) 150
NdeI CATATG 1 cut(s) 10
NdeII GATC 8 cut(s) 4, 341, 600, 1234, 1532, 1540, 1956, 2007
NlaIV GGNNCC 4 cut(s) 6, 981, 1110, 1953
NmuCI GTSAC 4 cut(s) 996, 1204, 1219, 1240
NsiI ATGCAT 2 cut(s) 255, 1346
NspI RCATGY 2 cut(s) 1330, 1778
PaeI GCATGC 1 cut(s) 1330
PagI TCATGA 2 cut(s) 408, 1537
PciI ACATGT 1 cut(s) 1774
PciSI GCTCTTC 1 cut(s) 71
PctI GAATGC 2 cut(s) 253, 255
PdmI GAANNNNTTC 1 cut(s) 253
PfeI GAWTC 3 cut(s) 552, 794, 1116
PkrI GCNGC 5 cut(s) 361, 859, 1165, 1249, 1427
Ple19I CGATCG 1 cut(s) 1959
PleI GAGTC 1 cut(s) 1352
PpsI GAGTC 1 cut(s) 1352
Ppu21I YACGTR 1 cut(s) 188
PpuMI RGGWCCY 1 cut(s) 1459
PscI ACATGT 1 cut(s) 1774
Psp5II RGGWCCY 1 cut(s) 1459
Psp6I CCWGG 2 cut(s) 1111, 1627
PspGI CCWGG 2 cut(s) 1111, 1627
PspN4I GGNNCC 4 cut(s) 6, 981, 1110, 1953
PspPI GGNCC 7 cut(s) 154, 370, 1052, 1108, 1369, 1459, 1952
PspPPI RGGWCCY 1 cut(s) 1459
PstI CTGCAG 1 cut(s) 1252
PstNI CAGNNNCTG 1 cut(s) 1979
PsuI RGATCY 3 cut(s) 4, 341, 1532
PvuI CGATCG 1 cut(s) 1959
RsaI GTAC 5 cut(s) 180, 521, 619, 1069, 1865
RsaNI GTAC 5 cut(s) 179, 520, 618, 1068, 1864
RseI CAYNNNNRTG 2 cut(s) 899, 1629
SapI GCTCTTC 1 cut(s) 71
SaqAI TTAA 7 cut(s) 123, 614, 783, 960, 1077, 1176, 1649
SatI GCNGC 5 cut(s) 360, 858, 1164, 1248, 1426
Sau3AI GATC 8 cut(s) 4, 341, 600, 1234, 1532, 1540, 1956, 2007
Sau96I GGNCC 7 cut(s) 154, 370, 1052, 1108, 1369, 1459, 1952
ScaI AGTACT 1 cut(s) 1865
SchI GAGTC 1 cut(s) 1352
ScrFI CCNGG 2 cut(s) 1113, 1629
SduI GDGCHC 4 cut(s) 28, 933, 982, 1717
SfaNI GCATC 2 cut(s) 1666, 1819
SfcI CTRYAG 2 cut(s) 726, 1248
SinI GGWCC 5 cut(s) 154, 370, 1108, 1459, 1952
SmiMI CAYNNNNRTG 2 cut(s) 899, 1629
SmlI CTYRAG 2 cut(s) 1648, 1681
SmoI CTYRAG 2 cut(s) 1648, 1681
SpeI ACTAGT 1 cut(s) 1171
SphI GCATGC 1 cut(s) 1330
Sse9I AATT 8 cut(s) 378, 604, 954, 1060, 1488, 1782, 1819, 1982
SsiI CCGC 3 cut(s) 1030, 1106, 1425
SspMI CTAG 7 cut(s) 80, 162, 464, 806, 1172, 1692, 2039
StyD4I CCNGG 2 cut(s) 1111, 1627
StyI CCWWGG 3 cut(s) 150, 286, 563
TaaI ACNGT 7 cut(s) 119, 524, 898, 925, 1204, 1667, 2024
TaiI ACGT 1 cut(s) 190
TaqI TCGA 4 cut(s) 1266, 1313, 1361, 1551
TasI AATT 8 cut(s) 378, 604, 954, 1060, 1488, 1782, 1819, 1982
TatI WGTACW 2 cut(s) 178, 1863
TauI GCSGC 1 cut(s) 1428
TfiI GAWTC 3 cut(s) 552, 794, 1116
Tru1I TTAA 7 cut(s) 123, 614, 783, 960, 1077, 1176, 1649
Tru9I TTAA 7 cut(s) 123, 614, 783, 960, 1077, 1176, 1649
TscAI CASTG 4 cut(s) 529, 901, 1249, 2029
TseFI GTSAC 4 cut(s) 996, 1204, 1219, 1240
TseI GCWGC 4 cut(s) 359, 857, 1163, 1247
Tsp45I GTSAC 4 cut(s) 996, 1204, 1219, 1240
TspGWI ACGGA 1 cut(s) 1471
TspRI CASTG 4 cut(s) 529, 901, 1249, 2029
Vha464I CTTAAG 1 cut(s) 1648
VneI GTGCAC 1 cut(s) 929
VpaK11BI GGWCC 5 cut(s) 154, 370, 1108, 1459, 1952
XapI RAATTY 3 cut(s) 1060, 1488, 1982
XceI RCATGY 2 cut(s) 1330, 1778
XcmI CCANNNNNNNNNTGG 2 cut(s) 898, 2021
XmiI GTMKAC 3 cut(s) 1497, 1662, 1687
XmnI GAANNNNTTC 1 cut(s) 253
XspI CTAG 7 cut(s) 80, 162, 464, 806, 1172, 1692, 2039
ZrmI AGTACT 1 cut(s) 1865
Zsp2I ATGCAT 2 cut(s) 255, 1346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.