Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0010313

Physical Location & Seq

Genomic Coordinates Reverse (-)

1590314 .. 1598083

Gene Structure 7770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1018400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGAATTCCCCGTCTTGCTCCTCCGTCATCATCGTCGGCGCCGGAGTCTCCGGTTTATCGGCGGCGAAGGTGTTGATCGAGAACGGCGTGGAGGACGTGGTGATTCTGGAAGCTTCCGACCGAATCGGCGGTAGGATCCGAAAACAAGATTTCGGCGGCGTGCCGGTAGAGCTTGGCGCCGGTTGGATAGTCGGAGTCGGAGGCAGAGAATTGAACCCGGTCTTGGACCTTGCCCGGAAGTCGAATCTCCGCACTTTCTTCTCCGATTACAGTAATGCTCGCTACAACATCTACGATCGCAGCGGGAAGGTATTTCCTAGAGGACTGGTGGAAGAGACGTACAAGAAGGAAGTGGAGTCGGCGGTGCAGAAGTTGAAGAAGCTTGAAGCCGACTGTGGCTACGGCGGCGATTTCTCCAATGCCACCGAACCGCCCTCTACACAGAAAACGCCGATGGAGCTCGCCATTGATTTCACCCTACACGATTTTGAGATGCCAGAAGTGGAGCCCATATCAACCTTTTTGGATTATGGAGAACGAGAGTTTTTGGTTGCGGACGAGAGAGGTTATGAGCATTTGCTATACAAAATGGCTGAAGATTTTCTTTTTAACTCTGAGGGTAAACTGCTGGACAGTCGTCTCAAGTTCAATAAGGTTGTTCGGGCGTTGCAGCACTGGAGAAACGGCGTTACGGTAATGACGGAAGATGGTTGCATCTTCCAAGCAAATTACATGATTTTGTCAGTTAGCATTGGTGTTCTCCAGAGCGACCTCATTGCCTTCAATCCACCCTTACCCAGGTGGAAAACAGAGGCTATAGCGAAATGCGATGTGATAGTTTACACGAAGATCTTTCTGAAGTTCCCGTATAAGTTTTGGCCATGTGGGCCAGGAAAAGAGTTCTTCCTGTATGCCCATGAGAGAAGAGGCTACTACACATTTTGGCAGCACATGGAGAATGCTTATCCAGGATCCAATATGTTGGTCGTGACCTTAACGAATGAGGAATCAAAGCGTGTGGAAGCTCAGTCTGATGAGGAGACGTTGAAAGAAGCCATGGGGGCTCTTACGGACATGTTTGGGCCCAACATTCCCGAAGCGACTGATATACTTGTACCTCGCTGGTGGAACAATAGATTCCAGCGAGGCAGCTACAGTAACTACCCTATAGTCTCTAATGACCATTTTGTTCATGACATCAAGAACCCAGTAGGCCGCATCTTCTTCACCGGGGAACACACAAGTGAAAAATTTAGCGGCTATGTCCACGGCGGACATCTTGCAGGTATTGAGACCGGTAAAGCGTTGTTGGAAGAAATGGAGAAGGAGAAGGAAAGGACTAGTGAGAGTGAAAACCAAACTTTCTTGTTAGAACCCTTGCTTGCATTGACCAGTTCATTAAGTTTGACACAGAACGATGCTGTATCGAGTCTCAAATGCGATATCCCTAGAAAATCATATTTAAGTGGCAAAGTTGGCATCCCAGAGCTATGTTATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0006576 GO:0006595 GO:0006598 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009308 GO:0009310 GO:0009987 GO:0016491 GO:0016645 GO:0016647 GO:0034641 GO:0036094 GO:0042402 GO:0043167 GO:0043168 GO:0044106 GO:0044237 GO:0046592 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00330 ko00410 ko01100 map00330 map00410 map01100

Pfam Domains

Protein Families

Amino_oxidase

Protein Analysis

501

Amino Acids

56.26

Weight (kDa)

5.26

Isoelectric Point (pI)

36.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_8	PF13450	11 - 72	9.2e-12	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	16 - 432	6.7e-62	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13700
fragaria_vesca	FvH4_7g01450 FvH4_7g01450
malus_domestica	MD02G1306200.v1.1 MD07G1018400.v1.1
prunus_persica	Prupe.2G020100_v2.0.a1
pyrus_communis	pycom02g25660 pycom07g01450
rosa_chinensis	RchiOBHm_Chr1g0317291
rosa_laevigata	RLG00000029573 RLG00000030612
rosa_multiflora	Rmu_sc0007593.1_g000009 Rmu_sc0039313.1_g000001 Rmu_sc0039399.1_g000001
rosa_roxburghii	Rroxscaffold_4G00330540
rosa_rugosa	Rorug01G0015600
rosa_samantha	Rh1AG026800 Rh1BG022900 Rh1CG024900 Rh1DG046800
rosa_wichuraiana	Rw1G001860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1274
AccB1I	GGYRCC	2 cut(s)	38, 176
AclWI	GGATC	4 cut(s)	130, 143, 966, 979
AcoI	YGGCCR	1 cut(s)	878
AcsI	RAATTY	2 cut(s)	4, 1250
AcuI	CTGAAG	2 cut(s)	615, 878
AcyI	GRCGYC	2 cut(s)	39, 177
AfaI	GTAC	2 cut(s)	341, 1116
AfiI	CCNNNNNNNGG	2 cut(s)	223, 798
AflIII	ACRYGT	1 cut(s)	1074
AgeI	ACCGGT	1 cut(s)	1295
AgsI	TTSAA	6 cut(s)	214, 376, 386, 649, 784, 1048
AhlI	ACTAGT	1 cut(s)	1340
AjiI	CACGTC	1 cut(s)	97
AjnI	CCWGG	3 cut(s)	797, 889, 967
AjuI	GAANNNNNNNTTGG	2 cut(s)	206, 238
AleI	CACNNNNGTG	1 cut(s)	1242
AluBI	AGCT	7 cut(s)	113, 172, 382, 460, 1025, 1152, 1489
AluI	AGCT	7 cut(s)	113, 172, 382, 460, 1025, 1152, 1489
Alw21I	GWGCWC	1 cut(s)	462
Alw26I	GTCTC	7 cut(s)	52, 329, 644, 1034, 1177, 1286, 1436
AlwI	GGATC	4 cut(s)	130, 143, 966, 979
AoxI	GGCC	4 cut(s)	878, 887, 1082, 1213
ApaI	GGGCCC	1 cut(s)	1086
ApeKI	GCWGC	4 cut(s)	300, 670, 946, 1149
ApoI	RAATTY	2 cut(s)	4, 1250
AsiGI	ACCGGT	1 cut(s)	1295
Asp700I	GAANNNNTTC	1 cut(s)	600
AspLEI	GCGC	2 cut(s)	41, 179
AspS9I	GGNCC	4 cut(s)	226, 887, 1082, 1083
AsuC2I	CCSGG	3 cut(s)	218, 235, 1231
AsuHPI	GGTGA	3 cut(s)	112, 466, 1219
AvaII	GGWCC	1 cut(s)	226
BaeGI	GKGCMC	1 cut(s)	1086
BalI	TGGCCA	1 cut(s)	880
BamHI	GGATCC	2 cut(s)	135, 971
BanI	GGYRCC	2 cut(s)	38, 176
BanII	GRGCYC	4 cut(s)	462, 510, 1066, 1086
Bbv12I	GWGCWC	1 cut(s)	462
BbvI	GCAGC	4 cut(s)	312, 682, 958, 1161
BccI	CCATC	2 cut(s)	448, 701
BceAI	ACGGC	4 cut(s)	100, 418, 700, 1285
BcgI	CGANNNNNNTGC	2 cut(s)	758, 792
BciT130I	CCWGG	3 cut(s)	799, 891, 969
BcnI	CCSGG	3 cut(s)	218, 235, 1231
BcoDI	GTCTC	7 cut(s)	52, 329, 644, 1034, 1177, 1286, 1436
BcuI	ACTAGT	1 cut(s)	1340
BfaI	CTAG	4 cut(s)	318, 1341, 1449, 1501
BfmI	CTRYAG	3 cut(s)	816, 1153, 1167
BfoI	RGCGCY	2 cut(s)	42, 180
BfuAI	ACCTGC	1 cut(s)	1274
BglI	GCCNNNNNGGC	2 cut(s)	886, 1061
BglII	AGATCT	1 cut(s)	849
BisI	GCNGC	9 cut(s)	63, 157, 301, 406, 671, 947, 1150, 1216, 1258
BlsI	GCNGC	9 cut(s)	64, 158, 302, 407, 672, 948, 1151, 1217, 1259
Bme1390I	CCNGG	6 cut(s)	218, 235, 799, 891, 969, 1231
Bme18I	GGWCC	1 cut(s)	226
BmgBI	CACGTC	1 cut(s)	97
BmgT120I	GGNCC	4 cut(s)	226, 887, 1082, 1083
BmiI	GGNNCC	6 cut(s)	40, 137, 178, 507, 973, 1084
BmrFI	CCNGG	6 cut(s)	218, 235, 799, 891, 969, 1231
BmrI	ACTGGG	1 cut(s)	1202
BmsI	GCATC	5 cut(s)	483, 723, 1227, 1408, 1488
BmuI	ACTGGG	1 cut(s)	1202
BoxI	GACNNNNGTC	1 cut(s)	636
BpmI	CTGGAG	2 cut(s)	697, 746
BpuEI	CTTGAG	1 cut(s)	626
BpuMI	CCSGG	3 cut(s)	218, 235, 1231
BsaHI	GRCGYC	2 cut(s)	39, 177
BsaI	GGTCTC	1 cut(s)	1286
BsaJI	CCNNGG	4 cut(s)	797, 1056, 1230, 1267
BsaWI	WCCGGW	2 cut(s)	50, 1295
Bsc4I	CCNNNNNNNGG	2 cut(s)	223, 798
Bse118I	RCCGGY	3 cut(s)	163, 179, 1295
Bse1I	ACTGG	4 cut(s)	330, 680, 1208, 1392
Bse3DI	GCAATG	1 cut(s)	774
BseBI	CCWGG	3 cut(s)	799, 891, 969
BseDI	CCNNGG	4 cut(s)	797, 1056, 1230, 1267
BseGI	GGATG	1 cut(s)	1479
BseLI	CCNNNNNNNGG	2 cut(s)	223, 798
BseMI	GCAATG	1 cut(s)	774
BseMII	CTCAG	2 cut(s)	606, 1040
BseNI	ACTGG	4 cut(s)	330, 680, 1208, 1392
BseRI	GAGGAG	2 cut(s)	10, 1052
BseSI	GKGCMC	1 cut(s)	1086
BseXI	GCAGC	4 cut(s)	312, 682, 958, 1161
BsgI	GTGCAG	1 cut(s)	386
Bsh1285I	CGRYCG	2 cut(s)	121, 298
BshFI	GGCC	4 cut(s)	880, 889, 1084, 1215
BshNI	GGYRCC	2 cut(s)	38, 176
BshTI	ACCGGT	1 cut(s)	1295
BsiEI	CGRYCG	2 cut(s)	121, 298
BsiHKAI	GWGCWC	1 cut(s)	462
BsiSI	CCGG	8 cut(s)	42, 51, 164, 180, 218, 235, 1230, 1296
BslI	CCNNNNNNNGG	2 cut(s)	223, 798
BsmAI	GTCTC	7 cut(s)	52, 329, 644, 1034, 1177, 1286, 1436
BsmBI	CGTCTC	3 cut(s)	329, 644, 1034
BsmI	GAATGC	1 cut(s)	964
BsnI	GGCC	4 cut(s)	880, 889, 1084, 1215
Bso31I	GGTCTC	1 cut(s)	1286
Bsp120I	GGGCCC	1 cut(s)	1082
Bsp1286I	GDGCHC	4 cut(s)	462, 510, 1066, 1086
Bsp143I	GATC	5 cut(s)	75, 135, 295, 849, 971
Bsp19I	CCATGG	1 cut(s)	1056
BspANI	GGCC	4 cut(s)	880, 889, 1084, 1215
BspCNI	CTCAG	2 cut(s)	607, 1039
BspHI	TCATGA	1 cut(s)	1192
BspLI	GGNNCC	6 cut(s)	40, 137, 178, 507, 973, 1084
BspMI	ACCTGC	1 cut(s)	1274
BspPI	GGATC	4 cut(s)	130, 143, 966, 979
BspT107I	GGYRCC	2 cut(s)	38, 176
BspTNI	GGTCTC	1 cut(s)	1286
BsrDI	GCAATG	1 cut(s)	774
BsrFI	RCCGGY	3 cut(s)	163, 179, 1295
BsrI	ACTGG	4 cut(s)	330, 680, 1208, 1392
BssAI	RCCGGY	3 cut(s)	163, 179, 1295
BssECI	CCNNGG	4 cut(s)	797, 1056, 1230, 1267
BssMI	GATC	5 cut(s)	75, 135, 295, 849, 971
BssNI	GRCGYC	2 cut(s)	39, 177
BssT1I	CCWWGG	1 cut(s)	1056
Bst2UI	CCWGG	3 cut(s)	799, 891, 969
Bst4CI	ACNGT	5 cut(s)	272, 395, 635, 694, 1157
Bst6I	CTCTTC	2 cut(s)	327, 919
BstACI	GRCGYC	2 cut(s)	39, 177
BstC8I	GCNNGC	4 cut(s)	161, 280, 462, 1383
BstDEI	CTNAG	2 cut(s)	615, 1026
BstDSI	CCRYGG	2 cut(s)	1056, 1267
BstENI	CCTNNNNNAGG	1 cut(s)	796
BstF5I	GGATG	1 cut(s)	1479
BstH2I	RGCGCY	2 cut(s)	42, 180
BstHHI	GCGC	2 cut(s)	41, 179
BstKTI	GATC	5 cut(s)	78, 138, 298, 852, 974
BstMAI	GTCTC	7 cut(s)	52, 329, 644, 1034, 1177, 1286, 1436
BstMBI	GATC	5 cut(s)	75, 135, 295, 849, 971
BstMCI	CGRYCG	2 cut(s)	121, 298
BstMWI	GCNNNNNNNGC	6 cut(s)	169, 405, 457, 886, 1061, 1476
BstNI	CCWGG	3 cut(s)	799, 891, 969
BstNSI	RCATGY	1 cut(s)	1078
BstPAI	GACNNNNGTC	1 cut(s)	636
BstSCI	CCNGG	6 cut(s)	216, 233, 797, 889, 967, 1229
BstSFI	CTRYAG	3 cut(s)	816, 1153, 1167
BstSLI	GKGCMC	1 cut(s)	1086
BstV1I	GCAGC	4 cut(s)	312, 682, 958, 1161
BstX2I	RGATCY	3 cut(s)	135, 849, 971
BstXI	CCANNNNNNTGG	1 cut(s)	982
BstYI	RGATCY	3 cut(s)	135, 849, 971
BsuRI	GGCC	4 cut(s)	880, 889, 1084, 1215
BtgI	CCRYGG	2 cut(s)	1056, 1267
BtgZI	GCGATG	1 cut(s)	843
BtrI	CACGTC	1 cut(s)	97
BtsCI	GGATG	1 cut(s)	1479
BtsIMutI	CAGTG	1 cut(s)	673
BveI	ACCTGC	1 cut(s)	1274
Cac8I	GCNNGC	4 cut(s)	161, 280, 462, 1383
CciI	TCATGA	1 cut(s)	1192
CfoI	GCGC	2 cut(s)	41, 179
Cfr10I	RCCGGY	3 cut(s)	163, 179, 1295
Cfr13I	GGNCC	4 cut(s)	226, 887, 1082, 1083
Csp6I	GTAC	2 cut(s)	340, 1115
CspAI	ACCGGT	1 cut(s)	1295
CspCI	CAANNNNNGTGG	2 cut(s)	999, 1034
CviAII	CATG	7 cut(s)	733, 882, 917, 952, 1057, 1075, 1193
CviQI	GTAC	2 cut(s)	340, 1115
DdeI	CTNAG	2 cut(s)	615, 1026
DinI	GGCGCC	2 cut(s)	40, 178
DpnI	GATC	5 cut(s)	77, 137, 297, 851, 973
DpnII	GATC	5 cut(s)	75, 135, 295, 849, 971
EaeI	YGGCCR	1 cut(s)	878
Eam1104I	CTCTTC	2 cut(s)	327, 919
EarI	CTCTTC	2 cut(s)	327, 919
EciI	GGCGGA	1 cut(s)	1287
Ecl136II	GAGCTC	1 cut(s)	460
Eco130I	CCWWGG	1 cut(s)	1056
Eco24I	GRGCYC	4 cut(s)	462, 510, 1066, 1086
Eco31I	GGTCTC	1 cut(s)	1286
Eco32I	GATATC	1 cut(s)	1444
Eco47I	GGWCC	1 cut(s)	226
Eco53kI	GAGCTC	1 cut(s)	460
Eco57I	CTGAAG	2 cut(s)	615, 878
EcoICRI	GAGCTC	1 cut(s)	460
EcoNI	CCTNNNNNAGG	1 cut(s)	796
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	3 cut(s)	797, 889, 967
EcoRV	GATATC	1 cut(s)	1444
EcoT14I	CCWWGG	1 cut(s)	1056
EcoT38I	GRGCYC	4 cut(s)	462, 510, 1066, 1086
EgeI	GGCGCC	2 cut(s)	40, 178
EheI	GGCGCC	2 cut(s)	40, 178
ErhI	CCWWGG	1 cut(s)	1056
Esp3I	CGTCTC	3 cut(s)	329, 644, 1034
FaeI	CATG	7 cut(s)	736, 885, 920, 955, 1060, 1078, 1196
FalI	AAGNNNNNCTT	2 cut(s)	588, 620
FatI	CATG	7 cut(s)	732, 881, 916, 951, 1056, 1074, 1192
FauI	CCCGC	1 cut(s)	296
Fnu4HI	GCNGC	9 cut(s)	63, 157, 301, 406, 671, 947, 1150, 1216, 1258
FokI	GGATG	1 cut(s)	1466
FriOI	GRGCYC	4 cut(s)	462, 510, 1066, 1086
Fsp4HI	GCNGC	9 cut(s)	63, 157, 301, 406, 671, 947, 1150, 1216, 1258
FspBI	CTAG	4 cut(s)	318, 1341, 1449, 1501
GlaI	GCGC	2 cut(s)	40, 178
GluI	GCNGC	9 cut(s)	63, 157, 301, 406, 671, 947, 1150, 1216, 1258
GsuI	CTGGAG	2 cut(s)	697, 746
HaeII	RGCGCY	2 cut(s)	42, 180
HaeIII	GGCC	4 cut(s)	880, 889, 1084, 1215
HapII	CCGG	8 cut(s)	42, 51, 164, 180, 218, 235, 1230, 1296
HhaI	GCGC	2 cut(s)	41, 179
Hin1I	GRCGYC	2 cut(s)	39, 177
Hin1II	CATG	7 cut(s)	736, 885, 920, 955, 1060, 1078, 1196
Hin6I	GCGC	2 cut(s)	39, 177
HinP1I	GCGC	2 cut(s)	39, 177
HindIII	AAGCTT	2 cut(s)	111, 380
HinfI	GANTC	9 cut(s)	45, 103, 123, 195, 244, 356, 1007, 1137, 1429
HpaII	CCGG	8 cut(s)	42, 51, 164, 180, 218, 235, 1230, 1296
HphI	GGTGA	3 cut(s)	112, 466, 1219
Hpy166II	GTNNAC	3 cut(s)	623, 841, 1267
Hpy188I	TCNGA	8 cut(s)	118, 140, 194, 200, 265, 616, 858, 1033
Hpy188III	TCNNGA	7 cut(s)	79, 107, 763, 988, 1094, 1193, 1201
Hpy8I	GTNNAC	3 cut(s)	623, 841, 1267
Hpy99I	CGWCG	1 cut(s)	38
HpyAV	CCTTC	6 cut(s)	61, 301, 340, 790, 1318, 1324
HpyCH4III	ACNGT	5 cut(s)	272, 395, 635, 694, 1157
HpyCH4IV	ACGT	3 cut(s)	96, 338, 1043
HpyCH4V	TGCA	5 cut(s)	367, 670, 714, 1283, 1385
HpyF10VI	GCNNNNNNNGC	6 cut(s)	169, 405, 457, 886, 1061, 1476
HpyF3I	CTNAG	2 cut(s)	615, 1026
HpySE526I	ACGT	3 cut(s)	96, 338, 1043
Hsp92I	GRCGYC	2 cut(s)	39, 177
Hsp92II	CATG	7 cut(s)	736, 885, 920, 955, 1060, 1078, 1196
HspAI	GCGC	2 cut(s)	39, 177
KasI	GGCGCC	2 cut(s)	38, 176
Kzo9I	GATC	5 cut(s)	75, 135, 295, 849, 971
LmnI	GCTCC	3 cut(s)	23, 457, 505
Lsp1109I	GCAGC	4 cut(s)	312, 682, 958, 1161
LweI	GCATC	5 cut(s)	483, 723, 1227, 1408, 1488
MaeI	CTAG	4 cut(s)	318, 1341, 1449, 1501
MaeII	ACGT	3 cut(s)	96, 338, 1043
MaeIII	GTNAC	3 cut(s)	688, 988, 1157
MalI	GATC	5 cut(s)	77, 137, 297, 851, 973
MboI	GATC	5 cut(s)	75, 135, 295, 849, 971
MflI	RGATCY	3 cut(s)	135, 849, 971
MhlI	GDGCHC	4 cut(s)	462, 510, 1066, 1086
MlsI	TGGCCA	1 cut(s)	880
MluCI	AATT	4 cut(s)	4, 209, 727, 1250
MluNI	TGGCCA	1 cut(s)	880
Mly113I	GGCGCC	2 cut(s)	39, 177
MlyI	GAGTC	4 cut(s)	54, 204, 365, 1438
MmeI	TCCRAC	5 cut(s)	141, 164, 172, 178, 1290
Mox20I	TGGCCA	1 cut(s)	880
MroXI	GAANNNNTTC	1 cut(s)	600
MscI	TGGCCA	1 cut(s)	880
MseI	TTAA	4 cut(s)	609, 995, 1400, 1463
MslI	CAYNNNNRTG	1 cut(s)	1242
Msp20I	TGGCCA	1 cut(s)	880
MspA1I	CMGCKG	1 cut(s)	303
MspI	CCGG	8 cut(s)	42, 51, 164, 180, 218, 235, 1230, 1296
MspR9I	CCNGG	6 cut(s)	218, 235, 799, 891, 969, 1231
Mva1269I	GAATGC	1 cut(s)	964
MvaI	CCWGG	3 cut(s)	799, 891, 969
MwoI	GCNNNNNNNGC	6 cut(s)	169, 405, 457, 886, 1061, 1476
NarI	GGCGCC	2 cut(s)	39, 177
NciI	CCSGG	3 cut(s)	218, 235, 1231
NcoI	CCATGG	1 cut(s)	1056
NdeII	GATC	5 cut(s)	75, 135, 295, 849, 971
NlaIII	CATG	7 cut(s)	736, 885, 920, 955, 1060, 1078, 1196
NlaIV	GGNNCC	6 cut(s)	40, 137, 178, 507, 973, 1084
NmuCI	GTSAC	1 cut(s)	988
NspI	RCATGY	1 cut(s)	1078
OliI	CACNNNNGTG	1 cut(s)	1242
PagI	TCATGA	1 cut(s)	1192
PciI	ACATGT	1 cut(s)	1074
PcsI	WCGNNNNNNNCGW	1 cut(s)	84
PctI	GAATGC	1 cut(s)	964
PdmI	GAANNNNTTC	1 cut(s)	600
PfeI	GAWTC	5 cut(s)	103, 123, 244, 1007, 1137
PfoI	TCCNGGA	1 cut(s)	967
PinAI	ACCGGT	1 cut(s)	1295
PkrI	GCNGC	9 cut(s)	64, 158, 302, 407, 672, 948, 1151, 1217, 1259
Ple19I	CGATCG	1 cut(s)	298
PleI	GAGTC	4 cut(s)	53, 203, 364, 1437
PluTI	GGCGCC	2 cut(s)	42, 180
PpsI	GAGTC	4 cut(s)	53, 203, 364, 1437
PscI	ACATGT	1 cut(s)	1074
PshAI	GACNNNNGTC	1 cut(s)	636
Psp124BI	GAGCTC	1 cut(s)	462
Psp6I	CCWGG	3 cut(s)	797, 889, 967
PspGI	CCWGG	3 cut(s)	797, 889, 967
PspN4I	GGNNCC	6 cut(s)	40, 137, 178, 507, 973, 1084
PspOMI	GGGCCC	1 cut(s)	1082
PspPI	GGNCC	4 cut(s)	226, 887, 1082, 1083
PsuI	RGATCY	3 cut(s)	135, 849, 971
PvuI	CGATCG	1 cut(s)	298
RsaI	GTAC	2 cut(s)	341, 1116
RsaNI	GTAC	2 cut(s)	340, 1115
RseI	CAYNNNNRTG	1 cut(s)	1242
SacI	GAGCTC	1 cut(s)	462
SaqAI	TTAA	4 cut(s)	609, 995, 1400, 1463
SatI	GCNGC	9 cut(s)	63, 157, 301, 406, 671, 947, 1150, 1216, 1258
Sau3AI	GATC	5 cut(s)	75, 135, 295, 849, 971
Sau96I	GGNCC	4 cut(s)	226, 887, 1082, 1083
SchI	GAGTC	4 cut(s)	54, 204, 365, 1438
ScrFI	CCNGG	6 cut(s)	218, 235, 799, 891, 969, 1231
SduI	GDGCHC	4 cut(s)	462, 510, 1066, 1086
SfaNI	GCATC	5 cut(s)	483, 723, 1227, 1408, 1488
SfcI	CTRYAG	3 cut(s)	816, 1153, 1167
SfiI	GGCCNNNNNGGCC	1 cut(s)	886
SfoI	GGCGCC	2 cut(s)	40, 178
SinI	GGWCC	1 cut(s)	226
SmiMI	CAYNNNNRTG	1 cut(s)	1242
SmlI	CTYRAG	1 cut(s)	641
SmoI	CTYRAG	1 cut(s)	641
SpeI	ACTAGT	1 cut(s)	1340
Sse9I	AATT	4 cut(s)	4, 209, 727, 1250
SspDI	GGCGCC	2 cut(s)	38, 176
SspMI	CTAG	4 cut(s)	318, 1341, 1449, 1501
SstI	GAGCTC	1 cut(s)	462
StyD4I	CCNGG	6 cut(s)	216, 233, 797, 889, 967, 1229
StyI	CCWWGG	1 cut(s)	1056
TaaI	ACNGT	5 cut(s)	272, 395, 635, 694, 1157
TaiI	ACGT	3 cut(s)	99, 341, 1046
TaqI	TCGA	3 cut(s)	78, 242, 1427
TaqII	GACCGA	1 cut(s)	135
TasI	AATT	4 cut(s)	4, 209, 727, 1250
TauI	GCSGC	5 cut(s)	65, 159, 408, 1218, 1260
TfiI	GAWTC	5 cut(s)	103, 123, 244, 1007, 1137
Tru1I	TTAA	4 cut(s)	609, 995, 1400, 1463
Tru9I	TTAA	4 cut(s)	609, 995, 1400, 1463
TscAI	CASTG	1 cut(s)	680
TseFI	GTSAC	1 cut(s)	988
TseI	GCWGC	4 cut(s)	300, 670, 946, 1149
Tsp45I	GTSAC	1 cut(s)	988
TspDTI	ATGAA	3 cut(s)	17, 1181, 1386
TspGWI	ACGGA	3 cut(s)	13, 716, 1085
TspRI	CASTG	1 cut(s)	680
VpaK11BI	GGWCC	1 cut(s)	226
XagI	CCTNNNNNAGG	1 cut(s)	796
XapI	RAATTY	2 cut(s)	4, 1250
XceI	RCATGY	1 cut(s)	1078
XmnI	GAANNNNTTC	1 cut(s)	600
XspI	CTAG	4 cut(s)	318, 1341, 1449, 1501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.