Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0010313

Physical Location & Seq

Genomic Coordinates Reverse (-)

7542416 .. 7548871

Gene Structure 6456 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG046800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGACTCTCCTCGTCGCTCCTCCGTGATCATAATCGGCGCTGGAGTCTCCGGCCTATCGGCGGCGAAGCTATTGATCGAGAAAGGCGTAGAGGACGTGGTGATTCTCGAAGCTTCGGACCGCATCGGCGGTAGGATCCGGAAACAAGAGTTCGGAGGCTTGTCGGTGGAGCTCGGCGCGGGTTGGATCGTCGGAGTCGGAGGAGAACAGCTTAATCCGGTTTGGGAGCTGGCCGAGAAAACGAACCTCCGGACTTGCTTCTCCGATTACAGTAATGCTCGCTTCAACATCTACGATCGCAGCGGGAATCTAATCCCGAGTGGACTTGCAGCAGACTCTTATAAGAAGGCGGTGGAGTCAGCCATGGAGAAGCTGAGGGAGCTGGAAGCCGACGCTTGCTACGGCGGCGACGTCTCCAAAGTTCCCAAGCCGCCTTCGTGTGGATTTTCCAGCACGCAGAAAACGCCGATAGAGCTGGCGATTGATTTCACTCTTCACGATTTCGAGATGGCAGAAGTTGAACCCATAGCAACGTATAACGATTTCGGAGAACAGGAATTTTTAGTTGCAGATGAAAGAGGGTACGAGCATTTGCTATATAAAATGGCTGATGATTTTCTATTTACCTCTGAGGGTAAAATCTTGGACAGTCGTCTCAGTCTCAATAAGGTTGTTCGGGAATTGAAGCACTCGAGGGACGGCGTTACCGTAATAACGGAGGATGGTTGCGTCTATCAAGCAAATTACGTGATTTTGTCAGCTAGCATCGGAGTCCTCCAAAGCAATCTCATTTCCTTCAGTCCACCCTTGCCTAGGTGGAAAACTGAGGCCATAGAGAAATTGGATGTGATGGTATATACGAAGATCTTTCTCAAGTTCCCTCATAAGTTCTGGCCATGTGGTCCTGGGAAAGAGTTCTTCATCTATGCCCATGAGCGGAGAGGCTACTACACATTTTGGCAGCACATGGAAAATGCATATCCTGGGTCCAATATCCTGGTCGTGACATTGACAAATGGGGAATCAAAGCGTGTGGAAGCTCAGACTGACGAGGAGACGGTGAAAGAAGCCATGGGGGTTCTTAGGGACATGTTTGGACCCAACATTCCTGAAGCTACTGATATACTCGTACCCCGCTGGTGGAACAATAGGTTCCAGCGTGGCAGCTATAGCAACTACCCAATAATCTCTAATCATCAAGTTGTTCGTGATATCAAGGCCCCAGTAGGTTGCATCTTCTTCACTGGAGAACACACGAGCGAAAAATACAGTGGCTATGTTCATGGTGCATACCTTACTGGGATTGACACTGCAAATGCGCTGCTTGAAGAAATGGGTAGGCAGGAGGAAAGGAGTAGCGAGAATAAAACTTCGTTGTCAGAACCCTTGCTAGCATTGACTAGTTCACTAATTTTGACACAGAAAGATGCTGTATCGAGTCTAAAATGCGATGTCCCTACACACTTATATCTTGGTGCCAAACACCCCAAACTATATTATGACTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0006576 GO:0006595 GO:0006598 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009308 GO:0009310 GO:0009987 GO:0016491 GO:0016645 GO:0016647 GO:0034641 GO:0036094 GO:0042402 GO:0043167 GO:0043168 GO:0044106 GO:0044237 GO:0046592 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00330 ko00410 ko01100 map00330 map00410 map01100

Pfam Domains

Protein Families

Amino_oxidase

Protein Analysis

502

Amino Acids

56.13

Weight (kDa)

5.34

Isoelectric Point (pI)

43.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAO	PF01266	9 - 44	7.1e-06	FAD dependent oxidoreductase
NAD_binding_8	PF13450	11 - 72	1.8e-12	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	16 - 442	6.4e-72	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13700
fragaria_vesca	FvH4_7g01450 FvH4_7g01450
malus_domestica	MD02G1306200.v1.1 MD07G1018400.v1.1
prunus_persica	Prupe.2G020100_v2.0.a1
pyrus_communis	pycom02g25660 pycom07g01450
rosa_chinensis	RchiOBHm_Chr1g0317291
rosa_laevigata	RLG00000029573 RLG00000030612
rosa_multiflora	Rmu_sc0007593.1_g000009 Rmu_sc0039313.1_g000001 Rmu_sc0039399.1_g000001
rosa_roxburghii	Rroxscaffold_4G00330540
rosa_rugosa	Rorug01G0015600
rosa_samantha	Rh1AG026800 Rh1BG022900 Rh1CG024900 Rh1DG046800
rosa_wichuraiana	Rw1G001860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	342
AatII	GACGTC	1 cut(s)	414
AccB1I	GGYRCC	1 cut(s)	1475
AccBSI	CCGCTC	1 cut(s)	937
AccII	CGCG	1 cut(s)	179
AccIII	TCCGGA	2 cut(s)	138, 249
AclWI	GGATC	3 cut(s)	130, 143, 194
AcoI	YGGCCR	2 cut(s)	231, 893
AcsI	RAATTY	1 cut(s)	557
AcuI	CTGAAG	2 cut(s)	781, 1131
AcyI	GRCGYC	1 cut(s)	411
AfaI	GTAC	2 cut(s)	584, 1131
AfiI	CCNNNNNNNGG	5 cut(s)	61, 440, 813, 936, 1140
AflIII	ACRYGT	1 cut(s)	1089
AgsI	TTSAA	4 cut(s)	286, 521, 685, 1328
AhlI	ACTAGT	1 cut(s)	1400
AjiI	CACGTC	1 cut(s)	97
AjnI	CCWGG	3 cut(s)	904, 982, 996
Alw21I	GWGCWC	1 cut(s)	174
Alw26I	GTCTC	5 cut(s)	52, 418, 659, 665, 1049
AlwI	GGATC	3 cut(s)	130, 143, 194
Ama87I	CYCGRG	2 cut(s)	316, 691
Aor13HI	TCCGGA	2 cut(s)	138, 249
AoxI	GGCC	5 cut(s)	52, 231, 828, 893, 1218
ApeKI	GCWGC	5 cut(s)	300, 329, 961, 1164, 1321
ApoI	RAATTY	1 cut(s)	557
Asp700I	GAANNNNTTC	1 cut(s)	914
AspA2I	CCTAGG	1 cut(s)	812
AspLEI	GCGC	3 cut(s)	41, 179, 1321
AspS9I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
AsuHPI	GGTGA	2 cut(s)	112, 1072
AsuNHI	GCTAGC	2 cut(s)	761, 1390
AvaI	CYCGRG	2 cut(s)	316, 691
AvaII	GGWCC	4 cut(s)	118, 902, 987, 1097
AvrII	CCTAGG	1 cut(s)	812
BalI	TGGCCA	1 cut(s)	895
BamHI	GGATCC	1 cut(s)	135
BanI	GGYRCC	1 cut(s)	1475
BanII	GRGCYC	1 cut(s)	174
BauI	CACGAG	1 cut(s)	1255
Bbv12I	GWGCWC	1 cut(s)	174
BbvCI	CCTCAGC	1 cut(s)	374
BbvI	GCAGC	5 cut(s)	312, 341, 973, 1176, 1308
BccI	CCATC	3 cut(s)	502, 716, 844
BceAI	ACGGC	2 cut(s)	418, 715
BciT130I	CCWGG	3 cut(s)	906, 984, 998
BclI	TGATCA	1 cut(s)	27
BcoDI	GTCTC	5 cut(s)	52, 418, 659, 665, 1049
BcuI	ACTAGT	1 cut(s)	1400
BfaI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
BfmI	CTRYAG	1 cut(s)	1168
BfoI	RGCGCY	1 cut(s)	42
BglII	AGATCT	1 cut(s)	864
BisI	GCNGC	8 cut(s)	63, 301, 330, 406, 431, 962, 1165, 1322
BlnI	CCTAGG	1 cut(s)	812
BlsI	GCNGC	8 cut(s)	64, 302, 331, 407, 432, 963, 1166, 1323
Bme1390I	CCNGG	3 cut(s)	906, 984, 998
Bme18I	GGWCC	4 cut(s)	118, 902, 987, 1097
BmeT110I	CYCGRG	2 cut(s)	316, 691
BmgBI	CACGTC	1 cut(s)	97
BmgT120I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
BmiI	GGNNCC	6 cut(s)	137, 988, 1099, 1154, 1221, 1477
BmrFI	CCNGG	3 cut(s)	906, 984, 998
BmrI	ACTGGG	2 cut(s)	1217, 1308
BmsI	GCATC	4 cut(s)	132, 774, 1242, 1417
BmtI	GCTAGC	2 cut(s)	765, 1394
BmuI	ACTGGG	2 cut(s)	1217, 1308
BoxI	GACNNNNGTC	1 cut(s)	651
BpmI	CTGGAG	2 cut(s)	63, 1266
Bpu10I	CCTNAGC	1 cut(s)	374
BpuEI	CTTGAG	1 cut(s)	857
BsaAI	YACGTR	1 cut(s)	748
BsaBI	GATNNNNATC	1 cut(s)	32
BsaHI	GRCGYC	1 cut(s)	411
BsaJI	CCNNGG	5 cut(s)	363, 812, 905, 983, 1071
BsaWI	WCCGGW	3 cut(s)	138, 217, 249
Bsc4I	CCNNNNNNNGG	5 cut(s)	61, 440, 813, 936, 1140
Bse1I	ACTGG	3 cut(s)	1223, 1249, 1303
Bse8I	GATNNNNATC	1 cut(s)	32
BseAI	TCCGGA	2 cut(s)	138, 249
BseBI	CCWGG	3 cut(s)	906, 984, 998
BseDI	CCNNGG	5 cut(s)	363, 812, 905, 983, 1071
BseGI	GGATG	2 cut(s)	727, 850
BseJI	GATNNNNATC	1 cut(s)	32
BseLI	CCNNNNNNNGG	5 cut(s)	61, 440, 813, 936, 1140
BseMII	CTCAG	5 cut(s)	365, 621, 670, 816, 1055
BseNI	ACTGG	3 cut(s)	1223, 1249, 1303
BseRI	GAGGAG	3 cut(s)	10, 216, 1067
BseXI	GCAGC	5 cut(s)	312, 341, 973, 1176, 1308
Bsh1236I	CGCG	1 cut(s)	179
Bsh1285I	CGRYCG	1 cut(s)	298
BshFI	GGCC	5 cut(s)	54, 233, 830, 895, 1220
BshNI	GGYRCC	1 cut(s)	1475
BsiEI	CGRYCG	1 cut(s)	298
BsiHKAI	GWGCWC	1 cut(s)	174
BsiHKCI	CYCGRG	2 cut(s)	316, 691
BsiSI	CCGG	4 cut(s)	51, 139, 218, 250
BslFI	GGGAC	3 cut(s)	710, 1100, 1439
BslI	CCNNNNNNNGG	5 cut(s)	61, 440, 813, 936, 1140
BsmAI	GTCTC	5 cut(s)	52, 418, 659, 665, 1049
BsmBI	CGTCTC	3 cut(s)	418, 659, 1049
BsmFI	GGGAC	3 cut(s)	710, 1100, 1439
BsnI	GGCC	5 cut(s)	54, 233, 830, 895, 1220
BsoBI	CYCGRG	2 cut(s)	316, 691
Bsp1286I	GDGCHC	1 cut(s)	174
Bsp13I	TCCGGA	2 cut(s)	138, 249
Bsp143I	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
Bsp19I	CCATGG	2 cut(s)	363, 1071
BspANI	GGCC	5 cut(s)	54, 233, 830, 895, 1220
BspCNI	CTCAG	5 cut(s)	366, 622, 669, 817, 1054
BspEI	TCCGGA	2 cut(s)	138, 249
BspFNI	CGCG	1 cut(s)	179
BspLI	GGNNCC	6 cut(s)	137, 988, 1099, 1154, 1221, 1477
BspOI	GCTAGC	2 cut(s)	765, 1394
BspPI	GGATC	3 cut(s)	130, 143, 194
BspT107I	GGYRCC	1 cut(s)	1475
BsrBI	CCGCTC	1 cut(s)	937
BsrI	ACTGG	3 cut(s)	1223, 1249, 1303
BssECI	CCNNGG	5 cut(s)	363, 812, 905, 983, 1071
BssMI	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
BssNI	GRCGYC	1 cut(s)	411
BssSI	CACGAG	1 cut(s)	1255
BssT1I	CCWWGG	3 cut(s)	363, 812, 1071
Bst2BI	CACGAG	1 cut(s)	1255
Bst2UI	CCWGG	3 cut(s)	906, 984, 998
Bst4CI	ACNGT	5 cut(s)	272, 650, 709, 1060, 1271
Bst6I	CTCTTC	1 cut(s)	498
BstACI	GRCGYC	1 cut(s)	411
BstBAI	YACGTR	1 cut(s)	748
BstC8I	GCNNGC	7 cut(s)	231, 280, 397, 455, 477, 763, 1392
BstDEI	CTNAG	6 cut(s)	374, 630, 656, 825, 1041, 1082
BstDSI	CCRYGG	2 cut(s)	363, 1071
BstENI	CCTNNNNNAGG	1 cut(s)	811
BstF5I	GGATG	2 cut(s)	727, 850
BstFNI	CGCG	1 cut(s)	179
BstH2I	RGCGCY	1 cut(s)	42
BstHHI	GCGC	3 cut(s)	41, 179, 1321
BstKTI	GATC	6 cut(s)	30, 78, 138, 189, 298, 867
BstMAI	GTCTC	5 cut(s)	52, 418, 659, 665, 1049
BstMBI	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
BstMCI	CGRYCG	1 cut(s)	298
BstMWI	GCNNNNNNNGC	5 cut(s)	379, 405, 463, 472, 1170
BstNI	CCWGG	3 cut(s)	906, 984, 998
BstNSI	RCATGY	1 cut(s)	1093
BstPAI	GACNNNNGTC	1 cut(s)	651
BstSCI	CCNGG	3 cut(s)	904, 982, 996
BstSFI	CTRYAG	1 cut(s)	1168
BstUI	CGCG	1 cut(s)	179
BstV1I	GCAGC	5 cut(s)	312, 341, 973, 1176, 1308
BstX2I	RGATCY	2 cut(s)	135, 864
BstXI	CCANNNNNNTGG	1 cut(s)	997
BstYI	RGATCY	2 cut(s)	135, 864
BsuRI	GGCC	5 cut(s)	54, 233, 830, 895, 1220
BtgI	CCRYGG	2 cut(s)	363, 1071
BtgZI	GCGATG	1 cut(s)	1464
BtrI	CACGTC	1 cut(s)	97
BtsCI	GGATG	2 cut(s)	727, 850
BtsI	GCAGTG	1 cut(s)	1308
BtsIMutI	CAGTG	3 cut(s)	1242, 1276, 1308
Cac8I	GCNNGC	7 cut(s)	231, 280, 397, 455, 477, 763, 1392
CfoI	GCGC	3 cut(s)	41, 179, 1321
Cfr13I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
CpoI	CGGWCCG	1 cut(s)	118
CseI	GACGC	2 cut(s)	401, 718
Csp6I	GTAC	2 cut(s)	583, 1130
CspCI	CAANNNNNGTGG	2 cut(s)	1014, 1049
CspI	CGGWCCG	1 cut(s)	118
CviAII	CATG	7 cut(s)	364, 897, 932, 967, 1072, 1090, 1283
CviQI	GTAC	2 cut(s)	583, 1130
DdeI	CTNAG	6 cut(s)	374, 630, 656, 825, 1041, 1082
DpnI	GATC	6 cut(s)	29, 77, 137, 188, 297, 866
DpnII	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
EaeI	YGGCCR	2 cut(s)	231, 893
Eam1104I	CTCTTC	1 cut(s)	498
EarI	CTCTTC	1 cut(s)	498
Ecl136II	GAGCTC	1 cut(s)	172
Eco130I	CCWWGG	3 cut(s)	363, 812, 1071
Eco24I	GRGCYC	1 cut(s)	174
Eco32I	GATATC	1 cut(s)	1213
Eco47I	GGWCC	4 cut(s)	118, 902, 987, 1097
Eco53kI	GAGCTC	1 cut(s)	172
Eco57I	CTGAAG	2 cut(s)	781, 1131
Eco88I	CYCGRG	2 cut(s)	316, 691
EcoICRI	GAGCTC	1 cut(s)	172
EcoNI	CCTNNNNNAGG	1 cut(s)	811
EcoO109I	RGGNCCY	1 cut(s)	1219
EcoRII	CCWGG	3 cut(s)	904, 982, 996
EcoRV	GATATC	1 cut(s)	1213
EcoT14I	CCWWGG	3 cut(s)	363, 812, 1071
EcoT22I	ATGCAT	1 cut(s)	979
EcoT38I	GRGCYC	1 cut(s)	174
ErhI	CCWWGG	3 cut(s)	363, 812, 1071
Esp3I	CGTCTC	3 cut(s)	418, 659, 1049
FaeI	CATG	7 cut(s)	367, 900, 935, 970, 1075, 1093, 1286
FaqI	GGGAC	3 cut(s)	710, 1100, 1439
FatI	CATG	7 cut(s)	363, 896, 931, 966, 1071, 1089, 1282
FauI	CCCGC	3 cut(s)	172, 296, 1142
FbaI	TGATCA	1 cut(s)	27
Fnu4HI	GCNGC	8 cut(s)	63, 301, 330, 406, 431, 962, 1165, 1322
FokI	GGATG	2 cut(s)	734, 857
FriOI	GRGCYC	1 cut(s)	174
Fsp4HI	GCNGC	8 cut(s)	63, 301, 330, 406, 431, 962, 1165, 1322
FspBI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
GlaI	GCGC	3 cut(s)	40, 178, 1320
GluI	GCNGC	8 cut(s)	63, 301, 330, 406, 431, 962, 1165, 1322
GsuI	CTGGAG	2 cut(s)	63, 1266
HaeII	RGCGCY	1 cut(s)	42
HaeIII	GGCC	5 cut(s)	54, 233, 830, 895, 1220
HapII	CCGG	4 cut(s)	51, 139, 218, 250
HgaI	GACGC	2 cut(s)	401, 718
HhaI	GCGC	3 cut(s)	41, 179, 1321
Hin1I	GRCGYC	1 cut(s)	411
Hin1II	CATG	7 cut(s)	367, 900, 935, 970, 1075, 1093, 1286
Hin6I	GCGC	3 cut(s)	39, 177, 1319
HinP1I	GCGC	3 cut(s)	39, 177, 1319
HindIII	AAGCTT	1 cut(s)	111
HpaII	CCGG	4 cut(s)	51, 139, 218, 250
HphI	GGTGA	2 cut(s)	112, 1072
Hpy166II	GTNNAC	3 cut(s)	323, 803, 1406
Hpy8I	GTNNAC	3 cut(s)	323, 803, 1406
Hpy99I	CGWCG	4 cut(s)	18, 194, 395, 413
HpyAV	CCTTC	3 cut(s)	340, 444, 805
HpyCH4III	ACNGT	5 cut(s)	272, 650, 709, 1060, 1271
HpyCH4IV	ACGT	4 cut(s)	96, 411, 533, 747
HpyCH4V	TGCA	6 cut(s)	329, 569, 977, 1233, 1289, 1313
HpyF10VI	GCNNNNNNNGC	5 cut(s)	379, 405, 463, 472, 1170
HpyF3I	CTNAG	6 cut(s)	374, 630, 656, 825, 1041, 1082
HpySE526I	ACGT	4 cut(s)	96, 411, 533, 747
Hsp92I	GRCGYC	1 cut(s)	411
Hsp92II	CATG	7 cut(s)	367, 900, 935, 970, 1075, 1093, 1286
HspAI	GCGC	3 cut(s)	39, 177, 1319
Kpn2I	TCCGGA	2 cut(s)	138, 249
Ksp22I	TGATCA	1 cut(s)	27
Kzo9I	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
LmnI	GCTCC	4 cut(s)	23, 169, 226, 379
Lsp1109I	GCAGC	5 cut(s)	312, 341, 973, 1176, 1308
LweI	GCATC	4 cut(s)	132, 774, 1242, 1417
MaeI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
MaeII	ACGT	4 cut(s)	96, 411, 533, 747
MaeIII	GTNAC	2 cut(s)	703, 1003
MalI	GATC	6 cut(s)	29, 77, 137, 188, 297, 866
MbiI	CCGCTC	1 cut(s)	937
MboI	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
MboII	GAAGA	6 cut(s)	485, 874, 910, 1228, 1231, 1340
MflI	RGATCY	2 cut(s)	135, 864
MhlI	GDGCHC	1 cut(s)	174
MlsI	TGGCCA	1 cut(s)	895
MluCI	AATT	5 cut(s)	557, 680, 742, 839, 1410
MluNI	TGGCCA	1 cut(s)	895
MlyI	GAGTC	6 cut(s)	54, 204, 329, 365, 780, 1447
MmeI	TCCRAC	3 cut(s)	164, 172, 178
Mox20I	TGGCCA	1 cut(s)	895
Mph1103I	ATGCAT	1 cut(s)	979
MroI	TCCGGA	2 cut(s)	138, 249
MroXI	GAANNNNTTC	1 cut(s)	914
MscI	TGGCCA	1 cut(s)	895
MseI	TTAA	1 cut(s)	213
Msp20I	TGGCCA	1 cut(s)	895
MspA1I	CMGCKG	2 cut(s)	303, 1137
MspI	CCGG	4 cut(s)	51, 139, 218, 250
MspR9I	CCNGG	3 cut(s)	906, 984, 998
MvaI	CCWGG	3 cut(s)	906, 984, 998
MvnI	CGCG	1 cut(s)	179
MwoI	GCNNNNNNNGC	5 cut(s)	379, 405, 463, 472, 1170
NcoI	CCATGG	2 cut(s)	363, 1071
NdeII	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
NheI	GCTAGC	2 cut(s)	761, 1390
NlaIII	CATG	7 cut(s)	367, 900, 935, 970, 1075, 1093, 1286
NlaIV	GGNNCC	6 cut(s)	137, 988, 1099, 1154, 1221, 1477
NmeAIII	GCCGAG	2 cut(s)	153, 259
NmuCI	GTSAC	1 cut(s)	1003
NsiI	ATGCAT	1 cut(s)	979
NspI	RCATGY	1 cut(s)	1093
PaeR7I	CTCGAG	1 cut(s)	691
PciI	ACATGT	1 cut(s)	1089
PcsI	WCGNNNNNNNCGW	3 cut(s)	84, 408, 705
PdmI	GAANNNNTTC	1 cut(s)	914
PfeI	GAWTC	3 cut(s)	103, 307, 1022
PkrI	GCNGC	8 cut(s)	64, 302, 331, 407, 432, 963, 1166, 1323
Ple19I	CGATCG	1 cut(s)	298
PleI	GAGTC	6 cut(s)	53, 203, 329, 364, 779, 1446
PpsI	GAGTC	6 cut(s)	53, 203, 329, 364, 779, 1446
Ppu21I	YACGTR	1 cut(s)	748
PscI	ACATGT	1 cut(s)	1089
PshAI	GACNNNNGTC	1 cut(s)	651
PsiI	TTATAA	1 cut(s)	342
Psp124BI	GAGCTC	1 cut(s)	174
Psp6I	CCWGG	3 cut(s)	904, 982, 996
PspGI	CCWGG	3 cut(s)	904, 982, 996
PspN4I	GGNNCC	6 cut(s)	137, 988, 1099, 1154, 1221, 1477
PspPI	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
PspXI	VCTCGAGB	1 cut(s)	691
PsuI	RGATCY	2 cut(s)	135, 864
PvuI	CGATCG	1 cut(s)	298
RsaI	GTAC	2 cut(s)	584, 1131
RsaNI	GTAC	2 cut(s)	583, 1130
Rsr2I	CGGWCCG	1 cut(s)	118
RsrII	CGGWCCG	1 cut(s)	118
SacI	GAGCTC	1 cut(s)	174
SaqAI	TTAA	1 cut(s)	213
SatI	GCNGC	8 cut(s)	63, 301, 330, 406, 431, 962, 1165, 1322
Sau3AI	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
Sau96I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
SchI	GAGTC	6 cut(s)	54, 204, 329, 365, 780, 1447
ScrFI	CCNGG	3 cut(s)	906, 984, 998
SduI	GDGCHC	1 cut(s)	174
SfaNI	GCATC	4 cut(s)	132, 774, 1242, 1417
SfcI	CTRYAG	1 cut(s)	1168
Sfr274I	CTCGAG	1 cut(s)	691
SinI	GGWCC	4 cut(s)	118, 902, 987, 1097
SlaI	CTCGAG	1 cut(s)	691
SmlI	CTYRAG	2 cut(s)	691, 872
SmoI	CTYRAG	2 cut(s)	691, 872
SpeI	ACTAGT	1 cut(s)	1400
Sse9I	AATT	5 cut(s)	557, 680, 742, 839, 1410
SspMI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
SstI	GAGCTC	1 cut(s)	174
StyD4I	CCNGG	3 cut(s)	904, 982, 996
StyI	CCWWGG	3 cut(s)	363, 812, 1071
TaaI	ACNGT	5 cut(s)	272, 650, 709, 1060, 1271
TaiI	ACGT	4 cut(s)	99, 414, 536, 750
TaqI	TCGA	5 cut(s)	78, 108, 504, 692, 1436
TasI	AATT	5 cut(s)	557, 680, 742, 839, 1410
TauI	GCSGC	3 cut(s)	65, 408, 433
TfiI	GAWTC	3 cut(s)	103, 307, 1022
Tru1I	TTAA	1 cut(s)	213
Tru9I	TTAA	1 cut(s)	213
TscAI	CASTG	3 cut(s)	1249, 1276, 1315
TseFI	GTSAC	1 cut(s)	1003
TseI	GCWGC	5 cut(s)	300, 329, 961, 1164, 1321
Tsp45I	GTSAC	1 cut(s)	1003
TspDTI	ATGAA	3 cut(s)	588, 910, 1271
TspGWI	ACGGA	2 cut(s)	13, 731
TspRI	CASTG	3 cut(s)	1249, 1276, 1315
VpaK11BI	GGWCC	4 cut(s)	118, 902, 987, 1097
XagI	CCTNNNNNAGG	1 cut(s)	811
XapI	RAATTY	1 cut(s)	557
XceI	RCATGY	1 cut(s)	1093
XcmI	CCANNNNNNNNNTGG	1 cut(s)	838
XhoI	CTCGAG	1 cut(s)	691
XmaJI	CCTAGG	1 cut(s)	812
XmnI	GAANNNNTTC	1 cut(s)	914
XspI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
ZraI	GACGTC	1 cut(s)	412
Zsp2I	ATGCAT	1 cut(s)	979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.