Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0010313

Physical Location & Seq

Genomic Coordinates Reverse (-)

64398652 .. 64405316

Gene Structure 6665 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030612

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGACTCTCCTCCTCGCTCCTCCGTGATCATAATCGGCGCTGGAGTCTCCGGCCTATCGGCGGCGAAGCTGTTGATCGAGAAAGGCGTAAAGGACGTGGTGATTCTGGAAGCTTCGGACCGCATCGGCGGTAGGATCCGGAAACAAGAATTCGGAGGCGTGTCGGTGGAGCTCGGCGCCGGTTGGATCGTCGGAGTCGGCGGAGAACAGCTTAATCCGGTTTGGGAGCTCGCCGAGAAAACTAACCTCCGGACTTGCTTCTCCGATTATAGTAATGCTCGCTTCAACATCTACGATCGCAGCGGGAATCTAATCCCGAGTGGACTCGCAGCAGACTCTTACAAGAAGGCCGTGGAATCGGCGATGGAGAAGCTGAGGGAGCTGGAAGCCGACGCTTGCTACGGCGGCAACGTTTCCAAAGTTACCGAACCGACTTCGTGCGGATTTTCCAGTACTCAGAAAACGCCGATAGAGCTGGCCATTGATTTCACTCTACACGATTTCGAGATGGCAGAAGTTGAACCCATAGCAACGTATAACGATTTCGGAGAACAGGAATTTTTAGTTGCAGATGAAAGAGGGTACGAGCATTTGCTATACAAAATGGCTGATGATTTTCTTTTTACCTCTGAGGGTAAAATCTTGGACAGTCGTCTCAGTCTCAATAAGGTTGTCCGGGAATTGAAGCACTCGAGGGACGGCGTTACCGTAATGACGGAGGATGGTTGCGTCTACCAAGCAAATTACGTGATTTTGTCAGCTAGCATCGGAGTCCTCCAAAGCGGCCTCATTTCCTTCAGTCCGCCCTTGCCCAGGTGGAAAACTGAGGCCATAGAGATATTGGATGTGATGGTGTATACGAAGATCTTTCTCAAGTTCCCTCATAAGTTCTGGCCATGTGGTCCTGGGAAAGAGTTCTTCATCTATGCCCATGAGCGGAGAGGCTACTACACATTTTGGCAGCACATGGAAAATGCATATCCTGGGTCCAATATCCTGGTCGTGACATTGACAAATGGGGAATCAAAGCGTGTGGAAGCTCAGTCTGACGAGGAGACGGTGAAAGAAGCCATGGGGGTTCTTAGGGACATGTTTGGACCCAACATTCCTGAAGCTACTGATATACTCGTACCCCGCTGGTGGAACAATAGGTTTCAGCGTGGCAGCTATAGCAACTACCCAATAATCTCTAATCATCAAGTTGTTCGTGATATCAAGGCCCCAGTCGGTTGCATCTTCTTCACTGGAGAACACACGAGCGAAAAATATAGTGGCTATGTTCATGGTGCATACCTTACTGGGATTGACACTGCAAATGCTCTGCTTGAAGAAATGGGTAGGCAGGAGGAAAGGAGTAGTGAGAATAAAACGTCGTTGTCAGAACCGTTGCTAGCATTGACTAGTTCACTAATTTTGACACAGAAAGATGCTGTATCGAGTCTAAAATGCGATGTCCCTACACAGTTATATCTTGGTGCTAAACACCCCAAACTATATTATGACTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0006576 GO:0006595 GO:0006598 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009308 GO:0009310 GO:0009987 GO:0016491 GO:0016645 GO:0016647 GO:0034641 GO:0036094 GO:0042402 GO:0043167 GO:0043168 GO:0044106 GO:0044237 GO:0046592 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00330 ko00410 ko01100 map00330 map00410 map01100

Pfam Domains

Protein Families

Amino_oxidase

Protein Analysis

503

Amino Acids

55.99

Weight (kDa)

5.23

Isoelectric Point (pI)

43.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAO	PF01266	9 - 44	6.7e-06	FAD dependent oxidoreductase
NAD_binding_8	PF13450	11 - 72	7.4e-13	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	16 - 442	1.2e-72	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13700
fragaria_vesca	FvH4_7g01450 FvH4_7g01450
malus_domestica	MD02G1306200.v1.1 MD07G1018400.v1.1
prunus_persica	Prupe.2G020100_v2.0.a1
pyrus_communis	pycom02g25660 pycom07g01450
rosa_chinensis	RchiOBHm_Chr1g0317291
rosa_laevigata	RLG00000029573 RLG00000030612
rosa_multiflora	Rmu_sc0007593.1_g000009 Rmu_sc0039313.1_g000001 Rmu_sc0039399.1_g000001
rosa_roxburghii	Rroxscaffold_4G00330540
rosa_rugosa	Rorug01G0015600
rosa_samantha	Rh1AG026800 Rh1BG022900 Rh1CG024900 Rh1DG046800
rosa_wichuraiana	Rw1G001860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	176
AccBSI	CCGCTC	1 cut(s)	937
AccI	GTMKAC	2 cut(s)	732, 857
AccIII	TCCGGA	2 cut(s)	138, 249
AclI	AACGTT	1 cut(s)	411
AclWI	GGATC	3 cut(s)	130, 143, 194
AcoI	YGGCCR	2 cut(s)	477, 893
AcsI	RAATTY	2 cut(s)	149, 557
AcuI	CTGAAG	2 cut(s)	781, 1131
AcyI	GRCGYC	1 cut(s)	177
AfaI	GTAC	3 cut(s)	454, 584, 1131
AfiI	CCNNNNNNNGG	4 cut(s)	61, 813, 936, 1140
AflIII	ACRYGT	1 cut(s)	1089
AgsI	TTSAA	4 cut(s)	286, 521, 685, 1328
AhlI	ACTAGT	1 cut(s)	1400
AjiI	CACGTC	1 cut(s)	97
AjnI	CCWGG	4 cut(s)	812, 904, 982, 996
Alw21I	GWGCWC	2 cut(s)	174, 231
Alw26I	GTCTC	4 cut(s)	52, 659, 665, 1049
AlwI	GGATC	3 cut(s)	130, 143, 194
Ama87I	CYCGRG	2 cut(s)	316, 691
Aor13HI	TCCGGA	2 cut(s)	138, 249
AoxI	GGCC	7 cut(s)	52, 348, 477, 784, 828, 893, 1218
ApeKI	GCWGC	4 cut(s)	300, 329, 961, 1164
ApoI	RAATTY	2 cut(s)	149, 557
Asp700I	GAANNNNTTC	1 cut(s)	914
AspLEI	GCGC	2 cut(s)	41, 179
AspS9I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
AsuC2I	CCSGG	1 cut(s)	677
AsuHPI	GGTGA	2 cut(s)	112, 1072
AsuNHI	GCTAGC	2 cut(s)	761, 1390
AvaI	CYCGRG	2 cut(s)	316, 691
AvaII	GGWCC	4 cut(s)	118, 902, 987, 1097
BalI	TGGCCA	2 cut(s)	479, 895
BamHI	GGATCC	1 cut(s)	135
BanI	GGYRCC	1 cut(s)	176
BanII	GRGCYC	2 cut(s)	174, 231
BauI	CACGAG	1 cut(s)	1255
Bbv12I	GWGCWC	2 cut(s)	174, 231
BbvCI	CCTCAGC	1 cut(s)	374
BbvI	GCAGC	4 cut(s)	312, 341, 973, 1176
BccI	CCATC	4 cut(s)	358, 502, 716, 844
BceAI	ACGGC	3 cut(s)	335, 418, 715
BciT130I	CCWGG	4 cut(s)	814, 906, 984, 998
BclI	TGATCA	1 cut(s)	27
BcnI	CCSGG	1 cut(s)	677
BcoDI	GTCTC	4 cut(s)	52, 659, 665, 1049
BcuI	ACTAGT	1 cut(s)	1400
BfaI	CTAG	4 cut(s)	762, 1391, 1401, 1507
BfmI	CTRYAG	1 cut(s)	1168
BfoI	RGCGCY	2 cut(s)	42, 180
BglII	AGATCT	1 cut(s)	864
BisI	GCNGC	7 cut(s)	63, 301, 330, 406, 784, 962, 1165
BlsI	GCNGC	7 cut(s)	64, 302, 331, 407, 785, 963, 1166
BmcAI	AGTACT	1 cut(s)	454
Bme1390I	CCNGG	5 cut(s)	677, 814, 906, 984, 998
Bme18I	GGWCC	4 cut(s)	118, 902, 987, 1097
BmeT110I	CYCGRG	2 cut(s)	316, 691
BmgBI	CACGTC	1 cut(s)	97
BmgT120I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
BmiI	GGNNCC	5 cut(s)	137, 178, 988, 1099, 1221
BmrFI	CCNGG	5 cut(s)	677, 814, 906, 984, 998
BmrI	ACTGGG	2 cut(s)	1217, 1308
BmsI	GCATC	4 cut(s)	132, 774, 1242, 1417
BmtI	GCTAGC	2 cut(s)	765, 1394
BmuI	ACTGGG	2 cut(s)	1217, 1308
BoxI	GACNNNNGTC	1 cut(s)	651
BpmI	CTGGAG	2 cut(s)	63, 1266
Bpu10I	CCTNAGC	1 cut(s)	374
BpuEI	CTTGAG	1 cut(s)	857
BpuMI	CCSGG	1 cut(s)	677
BsaAI	YACGTR	1 cut(s)	748
BsaBI	GATNNNNATC	1 cut(s)	32
BsaHI	GRCGYC	1 cut(s)	177
BsaJI	CCNNGG	5 cut(s)	351, 812, 905, 983, 1071
BsaWI	WCCGGW	3 cut(s)	138, 217, 249
Bsc4I	CCNNNNNNNGG	4 cut(s)	61, 813, 936, 1140
Bse118I	RCCGGY	1 cut(s)	179
Bse1I	ACTGG	4 cut(s)	450, 1223, 1249, 1303
Bse8I	GATNNNNATC	1 cut(s)	32
BseAI	TCCGGA	2 cut(s)	138, 249
BseBI	CCWGG	4 cut(s)	814, 906, 984, 998
BseDI	CCNNGG	5 cut(s)	351, 812, 905, 983, 1071
BseGI	GGATG	2 cut(s)	727, 850
BseJI	GATNNNNATC	1 cut(s)	32
BseLI	CCNNNNNNNGG	4 cut(s)	61, 813, 936, 1140
BseMII	CTCAG	6 cut(s)	365, 470, 621, 670, 816, 1055
BseNI	ACTGG	4 cut(s)	450, 1223, 1249, 1303
BseRI	GAGGAG	2 cut(s)	10, 1067
BseXI	GCAGC	4 cut(s)	312, 341, 973, 1176
Bsh1285I	CGRYCG	1 cut(s)	298
BshFI	GGCC	7 cut(s)	54, 350, 479, 786, 830, 895, 1220
BshNI	GGYRCC	1 cut(s)	176
BsiEI	CGRYCG	1 cut(s)	298
BsiHKAI	GWGCWC	2 cut(s)	174, 231
BsiHKCI	CYCGRG	2 cut(s)	316, 691
BsiSI	CCGG	6 cut(s)	51, 139, 180, 218, 250, 676
BslFI	GGGAC	3 cut(s)	710, 1100, 1439
BslI	CCNNNNNNNGG	4 cut(s)	61, 813, 936, 1140
BsmAI	GTCTC	4 cut(s)	52, 659, 665, 1049
BsmBI	CGTCTC	2 cut(s)	659, 1049
BsmFI	GGGAC	3 cut(s)	710, 1100, 1439
BsnI	GGCC	7 cut(s)	54, 350, 479, 786, 830, 895, 1220
BsoBI	CYCGRG	2 cut(s)	316, 691
Bsp1286I	GDGCHC	2 cut(s)	174, 231
Bsp13I	TCCGGA	2 cut(s)	138, 249
Bsp143I	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
Bsp19I	CCATGG	1 cut(s)	1071
BspANI	GGCC	7 cut(s)	54, 350, 479, 786, 830, 895, 1220
BspCNI	CTCAG	6 cut(s)	366, 469, 622, 669, 817, 1054
BspEI	TCCGGA	2 cut(s)	138, 249
BspLI	GGNNCC	5 cut(s)	137, 178, 988, 1099, 1221
BspOI	GCTAGC	2 cut(s)	765, 1394
BspPI	GGATC	3 cut(s)	130, 143, 194
BspT107I	GGYRCC	1 cut(s)	176
BsrBI	CCGCTC	1 cut(s)	937
BsrFI	RCCGGY	1 cut(s)	179
BsrI	ACTGG	4 cut(s)	450, 1223, 1249, 1303
BssAI	RCCGGY	1 cut(s)	179
BssECI	CCNNGG	5 cut(s)	351, 812, 905, 983, 1071
BssMI	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
BssNAI	GTATAC	1 cut(s)	858
BssNI	GRCGYC	1 cut(s)	177
BssSI	CACGAG	1 cut(s)	1255
BssT1I	CCWWGG	1 cut(s)	1071
Bst1107I	GTATAC	1 cut(s)	858
Bst2BI	CACGAG	1 cut(s)	1255
Bst2UI	CCWGG	4 cut(s)	814, 906, 984, 998
Bst4CI	ACNGT	5 cut(s)	650, 709, 1060, 1386, 1464
BstACI	GRCGYC	1 cut(s)	177
BstBAI	YACGTR	1 cut(s)	748
BstC8I	GCNNGC	6 cut(s)	231, 280, 397, 477, 763, 1392
BstDEI	CTNAG	7 cut(s)	374, 456, 630, 656, 825, 1041, 1082
BstDSI	CCRYGG	2 cut(s)	351, 1071
BstENI	CCTNNNNNAGG	1 cut(s)	811
BstF5I	GGATG	2 cut(s)	727, 850
BstH2I	RGCGCY	2 cut(s)	42, 180
BstHHI	GCGC	2 cut(s)	41, 179
BstKTI	GATC	6 cut(s)	30, 78, 138, 189, 298, 867
BstMAI	GTCTC	4 cut(s)	52, 659, 665, 1049
BstMBI	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
BstMCI	CGRYCG	1 cut(s)	298
BstMWI	GCNNNNNNNGC	4 cut(s)	379, 405, 472, 1170
BstNI	CCWGG	4 cut(s)	814, 906, 984, 998
BstNSI	RCATGY	1 cut(s)	1093
BstPAI	GACNNNNGTC	1 cut(s)	651
BstSCI	CCNGG	5 cut(s)	675, 812, 904, 982, 996
BstSFI	CTRYAG	1 cut(s)	1168
BstV1I	GCAGC	4 cut(s)	312, 341, 973, 1176
BstX2I	RGATCY	2 cut(s)	135, 864
BstXI	CCANNNNNNTGG	1 cut(s)	997
BstYI	RGATCY	2 cut(s)	135, 864
BstZ17I	GTATAC	1 cut(s)	858
BsuRI	GGCC	7 cut(s)	54, 350, 479, 786, 830, 895, 1220
BtgI	CCRYGG	2 cut(s)	351, 1071
BtgZI	GCGATG	2 cut(s)	377, 1464
BtrI	CACGTC	1 cut(s)	97
BtsCI	GGATG	2 cut(s)	727, 850
BtsI	GCAGTG	1 cut(s)	1308
BtsIMutI	CAGTG	2 cut(s)	1242, 1308
Cac8I	GCNNGC	6 cut(s)	231, 280, 397, 477, 763, 1392
CfoI	GCGC	2 cut(s)	41, 179
Cfr10I	RCCGGY	1 cut(s)	179
Cfr13I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
CpoI	CGGWCCG	1 cut(s)	118
CseI	GACGC	2 cut(s)	401, 718
Csp6I	GTAC	3 cut(s)	453, 583, 1130
CspCI	CAANNNNNGTGG	2 cut(s)	1014, 1049
CspI	CGGWCCG	1 cut(s)	118
CviAII	CATG	6 cut(s)	897, 932, 967, 1072, 1090, 1283
CviQI	GTAC	3 cut(s)	453, 583, 1130
DdeI	CTNAG	7 cut(s)	374, 456, 630, 656, 825, 1041, 1082
DinI	GGCGCC	1 cut(s)	178
DpnI	GATC	6 cut(s)	29, 77, 137, 188, 297, 866
DpnII	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
EaeI	YGGCCR	2 cut(s)	477, 893
EciI	GGCGGA	2 cut(s)	216, 792
Ecl136II	GAGCTC	2 cut(s)	172, 229
Eco130I	CCWWGG	1 cut(s)	1071
Eco24I	GRGCYC	2 cut(s)	174, 231
Eco32I	GATATC	1 cut(s)	1213
Eco47I	GGWCC	4 cut(s)	118, 902, 987, 1097
Eco53kI	GAGCTC	2 cut(s)	172, 229
Eco57I	CTGAAG	2 cut(s)	781, 1131
Eco88I	CYCGRG	2 cut(s)	316, 691
EcoICRI	GAGCTC	2 cut(s)	172, 229
EcoNI	CCTNNNNNAGG	1 cut(s)	811
EcoO109I	RGGNCCY	1 cut(s)	1219
EcoRI	GAATTC	1 cut(s)	149
EcoRII	CCWGG	4 cut(s)	812, 904, 982, 996
EcoRV	GATATC	1 cut(s)	1213
EcoT14I	CCWWGG	1 cut(s)	1071
EcoT22I	ATGCAT	1 cut(s)	979
EcoT38I	GRGCYC	2 cut(s)	174, 231
EgeI	GGCGCC	1 cut(s)	178
EheI	GGCGCC	1 cut(s)	178
ErhI	CCWWGG	1 cut(s)	1071
Esp3I	CGTCTC	2 cut(s)	659, 1049
FaeI	CATG	6 cut(s)	900, 935, 970, 1075, 1093, 1286
FaqI	GGGAC	3 cut(s)	710, 1100, 1439
FatI	CATG	6 cut(s)	896, 931, 966, 1071, 1089, 1282
FauI	CCCGC	2 cut(s)	296, 1142
FbaI	TGATCA	1 cut(s)	27
FblI	GTMKAC	2 cut(s)	732, 857
Fnu4HI	GCNGC	7 cut(s)	63, 301, 330, 406, 784, 962, 1165
FokI	GGATG	2 cut(s)	734, 857
FriOI	GRGCYC	2 cut(s)	174, 231
Fsp4HI	GCNGC	7 cut(s)	63, 301, 330, 406, 784, 962, 1165
FspBI	CTAG	4 cut(s)	762, 1391, 1401, 1507
GlaI	GCGC	2 cut(s)	40, 178
GluI	GCNGC	7 cut(s)	63, 301, 330, 406, 784, 962, 1165
GsuI	CTGGAG	2 cut(s)	63, 1266
HaeII	RGCGCY	2 cut(s)	42, 180
HaeIII	GGCC	7 cut(s)	54, 350, 479, 786, 830, 895, 1220
HapII	CCGG	6 cut(s)	51, 139, 180, 218, 250, 676
HgaI	GACGC	2 cut(s)	401, 718
HhaI	GCGC	2 cut(s)	41, 179
Hin1I	GRCGYC	1 cut(s)	177
Hin1II	CATG	6 cut(s)	900, 935, 970, 1075, 1093, 1286
Hin6I	GCGC	2 cut(s)	39, 177
HinP1I	GCGC	2 cut(s)	39, 177
HindIII	AAGCTT	1 cut(s)	111
HpaII	CCGG	6 cut(s)	51, 139, 180, 218, 250, 676
HphI	GGTGA	2 cut(s)	112, 1072
Hpy166II	GTNNAC	4 cut(s)	323, 733, 858, 1406
Hpy188III	TCNNGA	9 cut(s)	79, 107, 139, 250, 316, 505, 1003, 1109, 1208
Hpy8I	GTNNAC	4 cut(s)	323, 733, 858, 1406
Hpy99I	CGWCG	3 cut(s)	194, 395, 1375
HpyAV	CCTTC	2 cut(s)	340, 805
HpyCH4III	ACNGT	5 cut(s)	650, 709, 1060, 1386, 1464
HpyCH4IV	ACGT	5 cut(s)	96, 411, 533, 747, 1370
HpyCH4V	TGCA	5 cut(s)	569, 977, 1233, 1289, 1313
HpyF10VI	GCNNNNNNNGC	4 cut(s)	379, 405, 472, 1170
HpyF3I	CTNAG	7 cut(s)	374, 456, 630, 656, 825, 1041, 1082
HpySE526I	ACGT	5 cut(s)	96, 411, 533, 747, 1370
Hsp92I	GRCGYC	1 cut(s)	177
Hsp92II	CATG	6 cut(s)	900, 935, 970, 1075, 1093, 1286
HspAI	GCGC	2 cut(s)	39, 177
KasI	GGCGCC	1 cut(s)	176
Kpn2I	TCCGGA	2 cut(s)	138, 249
Ksp22I	TGATCA	1 cut(s)	27
Kzo9I	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
LmnI	GCTCC	4 cut(s)	23, 169, 226, 379
Lsp1109I	GCAGC	4 cut(s)	312, 341, 973, 1176
LweI	GCATC	4 cut(s)	132, 774, 1242, 1417
MaeI	CTAG	4 cut(s)	762, 1391, 1401, 1507
MaeII	ACGT	5 cut(s)	96, 411, 533, 747, 1370
MaeIII	GTNAC	3 cut(s)	421, 703, 1003
MalI	GATC	6 cut(s)	29, 77, 137, 188, 297, 866
MbiI	CCGCTC	1 cut(s)	937
MboI	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
MboII	GAAGA	5 cut(s)	874, 910, 1228, 1231, 1340
MflI	RGATCY	2 cut(s)	135, 864
MhlI	GDGCHC	2 cut(s)	174, 231
MlsI	TGGCCA	2 cut(s)	479, 895
MluCI	AATT	5 cut(s)	149, 557, 680, 742, 1410
MluNI	TGGCCA	2 cut(s)	479, 895
Mly113I	GGCGCC	1 cut(s)	177
MlyI	GAGTC	6 cut(s)	54, 204, 318, 329, 780, 1447
MmeI	TCCRAC	2 cut(s)	164, 172
Mox20I	TGGCCA	2 cut(s)	479, 895
Mph1103I	ATGCAT	1 cut(s)	979
MroI	TCCGGA	2 cut(s)	138, 249
MroXI	GAANNNNTTC	1 cut(s)	914
MscI	TGGCCA	2 cut(s)	479, 895
MseI	TTAA	1 cut(s)	213
Msp20I	TGGCCA	2 cut(s)	479, 895
MspA1I	CMGCKG	2 cut(s)	303, 1137
MspI	CCGG	6 cut(s)	51, 139, 180, 218, 250, 676
MspR9I	CCNGG	5 cut(s)	677, 814, 906, 984, 998
MvaI	CCWGG	4 cut(s)	814, 906, 984, 998
MwoI	GCNNNNNNNGC	4 cut(s)	379, 405, 472, 1170
NarI	GGCGCC	1 cut(s)	177
NciI	CCSGG	1 cut(s)	677
NcoI	CCATGG	1 cut(s)	1071
NdeII	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
NheI	GCTAGC	2 cut(s)	761, 1390
NlaIII	CATG	6 cut(s)	900, 935, 970, 1075, 1093, 1286
NlaIV	GGNNCC	5 cut(s)	137, 178, 988, 1099, 1221
NmeAIII	GCCGAG	2 cut(s)	153, 259
NmuCI	GTSAC	1 cut(s)	1003
NsiI	ATGCAT	1 cut(s)	979
NspI	RCATGY	1 cut(s)	1093
PaeR7I	CTCGAG	1 cut(s)	691
PciI	ACATGT	1 cut(s)	1089
PcsI	WCGNNNNNNNCGW	3 cut(s)	84, 408, 705
PdmI	GAANNNNTTC	1 cut(s)	914
PfeI	GAWTC	4 cut(s)	103, 307, 356, 1022
PfoI	TCCNGGA	1 cut(s)	675
PkrI	GCNGC	7 cut(s)	64, 302, 331, 407, 785, 963, 1166
Ple19I	CGATCG	1 cut(s)	298
PleI	GAGTC	6 cut(s)	53, 203, 318, 329, 779, 1446
PluTI	GGCGCC	1 cut(s)	180
PpsI	GAGTC	6 cut(s)	53, 203, 318, 329, 779, 1446
Ppu21I	YACGTR	1 cut(s)	748
PscI	ACATGT	1 cut(s)	1089
PshAI	GACNNNNGTC	1 cut(s)	651
Psp124BI	GAGCTC	2 cut(s)	174, 231
Psp1406I	AACGTT	1 cut(s)	411
Psp6I	CCWGG	4 cut(s)	812, 904, 982, 996
PspGI	CCWGG	4 cut(s)	812, 904, 982, 996
PspN4I	GGNNCC	5 cut(s)	137, 178, 988, 1099, 1221
PspPI	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
PspXI	VCTCGAGB	1 cut(s)	691
PsuI	RGATCY	2 cut(s)	135, 864
PvuI	CGATCG	1 cut(s)	298
RsaI	GTAC	3 cut(s)	454, 584, 1131
RsaNI	GTAC	3 cut(s)	453, 583, 1130
Rsr2I	CGGWCCG	1 cut(s)	118
RsrII	CGGWCCG	1 cut(s)	118
SacI	GAGCTC	2 cut(s)	174, 231
SaqAI	TTAA	1 cut(s)	213
SatI	GCNGC	7 cut(s)	63, 301, 330, 406, 784, 962, 1165
Sau3AI	GATC	6 cut(s)	27, 75, 135, 186, 295, 864
Sau96I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
ScaI	AGTACT	1 cut(s)	454
SchI	GAGTC	6 cut(s)	54, 204, 318, 329, 780, 1447
ScrFI	CCNGG	5 cut(s)	677, 814, 906, 984, 998
SduI	GDGCHC	2 cut(s)	174, 231
SfaNI	GCATC	4 cut(s)	132, 774, 1242, 1417
SfcI	CTRYAG	1 cut(s)	1168
SfoI	GGCGCC	1 cut(s)	178
Sfr274I	CTCGAG	1 cut(s)	691
SinI	GGWCC	4 cut(s)	118, 902, 987, 1097
SlaI	CTCGAG	1 cut(s)	691
SmlI	CTYRAG	2 cut(s)	691, 872
SmoI	CTYRAG	2 cut(s)	691, 872
SpeI	ACTAGT	1 cut(s)	1400
Sse9I	AATT	5 cut(s)	149, 557, 680, 742, 1410
SspDI	GGCGCC	1 cut(s)	176
SspMI	CTAG	4 cut(s)	762, 1391, 1401, 1507
SstI	GAGCTC	2 cut(s)	174, 231
StyD4I	CCNGG	5 cut(s)	675, 812, 904, 982, 996
StyI	CCWWGG	1 cut(s)	1071
TaaI	ACNGT	5 cut(s)	650, 709, 1060, 1386, 1464
TaiI	ACGT	5 cut(s)	99, 414, 536, 750, 1373
TaqI	TCGA	4 cut(s)	78, 504, 692, 1436
TasI	AATT	5 cut(s)	149, 557, 680, 742, 1410
TatI	WGTACW	1 cut(s)	452
TauI	GCSGC	3 cut(s)	65, 408, 786
TfiI	GAWTC	4 cut(s)	103, 307, 356, 1022
Tru1I	TTAA	1 cut(s)	213
Tru9I	TTAA	1 cut(s)	213
TscAI	CASTG	2 cut(s)	1249, 1315
TseFI	GTSAC	1 cut(s)	1003
TseI	GCWGC	4 cut(s)	300, 329, 961, 1164
Tsp45I	GTSAC	1 cut(s)	1003
TspDTI	ATGAA	3 cut(s)	588, 910, 1271
TspGWI	ACGGA	2 cut(s)	13, 731
TspRI	CASTG	2 cut(s)	1249, 1315
VpaK11BI	GGWCC	4 cut(s)	118, 902, 987, 1097
XagI	CCTNNNNNAGG	1 cut(s)	811
XapI	RAATTY	2 cut(s)	149, 557
XceI	RCATGY	1 cut(s)	1093
XcmI	CCANNNNNNNNNTGG	1 cut(s)	838
XhoI	CTCGAG	1 cut(s)	691
XmiI	GTMKAC	2 cut(s)	732, 857
XmnI	GAANNNNTTC	1 cut(s)	914
XspI	CTAG	4 cut(s)	762, 1391, 1401, 1507
ZrmI	AGTACT	1 cut(s)	454
Zsp2I	ATGCAT	1 cut(s)	979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.