Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0010313

Physical Location & Seq

Genomic Coordinates Reverse (-)

64234818 .. 64241948

Gene Structure 7131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00330540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGACTCTCCTCGTCGCTCCTCCGTGATCATAATCGGCGCTGGAGTCTCCGGCCTATCGGCGGCGAAGCTGTTGATCGAGAACGGCGTAGAGGACGTGGTGATTCTCGAAGCTTCGGACCGCATCGGCGGTAGGATTCGGAAACAAGAATTCGGAGGCGTGTCGGTGGAGCTTGGAGCCGGTTGGATCGTCGGAGTCGGCGGAGAACAGCTTAATCCGGTTTGGGAGCTCGCCGAGAAAACTAACCTCCGGACTTGCTTCTCCGATTATAGTAATGCTCGCTTCAACATCTACGATCGCAGCGGGAATCTAATCCCGAGTGGACTCGCAGCAGACTCTTACAAGAAGGCAGTGGAATCGGCGATGGAGAAGCTGAGGGAGCTGGAAGTCGACGCTTGCTACGGCGGCAACGTCTCCAAAGTTACCGAACCGACTTCGTGCGGATTTTCCAGTACGCAGAAAACGCCGATAGAGCTGGCGATTGATTTCACTCTACACGATTTCGAGATGGCAGAAGTTGAACCCATAGCAACCTATAACGATTTCGGAGAACAGGAATTTTTAGTTGCAGATGAAAGAGGGTACGAGCATTTGCTATATAAAATGGCTGGTGATTTTCTTTTTACCTCTGAGGGTAAAATCTTGGACAGTCGTCTCAATCTCAATAAGGTTGTTCGGGAATTGAAGCACTCGAGGGACGGCGTTACCGTAATGACGGAGGATGGTTGCGTCTATCAAGCCAATTATGTGATTTTGTCAGCTAGCATCGGAGTCCTCCAAAGCAATCTCATTTCCTTCAGTCCACCCTTGCCTAGGTGGAAAACTGAGGCCATAGAGAAATTGGATGTGATGGTATATACGAAGATCTTTCTCAAGTTCCCTCTTAAGTTCTGGCCATGTGGTCCTGGGAAAGAGTTCTTCATCTATGCCCATGAGCGGAGAGGCTACTACACATTTTGGCAGCACATGGAAAATGCATATCCTGGGTCCAATATCCTGGTCGTGACATTGACGAATGGGGAATCAAAGCGTGTGGAAGCTCAGTCTGACGAGGAGACGGTGAAAGAAGCCATGGGGGTTCTTAGGGACATGTTTGGACCCAACATTCCTGAAGCTACTGACATACTCGTACCCCGCTGGTGGAACAATAGGTTCCAGCGTGGCAGCTATAGCAACTACCCAATAATCTCTAATCATCAAGTTGTTCGTGATATCAAGGCCCCAGTAGGTTGCATCTTCTTCACTGGAGAACACACGAGCGAAAAATATAATGGCTATGTTCATGGTGCATACCTTACTGGGATTGACACTGCAAATGCTCTGCTTGAAGAAATGGGTACGCAGGAGGAAAGGAGTAGCGAGAATAAAACGTCATTGTCAGAACCCTTGCTAGCATTGACTAGTTCACTAATTTTGACACAGAAAGATGCTGTATCGAGTCTAAAATGCGATGTCCCTACACAGTTATATCTTGGTGCCAAACACCCCAAACTATATTATGACTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0006576 GO:0006595 GO:0006598 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009308 GO:0009310 GO:0009987 GO:0016491 GO:0016645 GO:0016647 GO:0034641 GO:0036094 GO:0042402 GO:0043167 GO:0043168 GO:0044106 GO:0044237 GO:0046592 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00330 ko00410 ko01100 map00330 map00410 map01100

Pfam Domains

Protein Families

Amino_oxidase

Protein Analysis

502

Amino Acids

56.05

Weight (kDa)

5.14

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_8	PF13450	11 - 72	1.2e-12	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	16 - 442	2.8e-71	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13700
fragaria_vesca	FvH4_7g01450 FvH4_7g01450
malus_domestica	MD02G1306200.v1.1 MD07G1018400.v1.1
prunus_persica	Prupe.2G020100_v2.0.a1
pyrus_communis	pycom02g25660 pycom07g01450
rosa_chinensis	RchiOBHm_Chr1g0317291
rosa_laevigata	RLG00000029573 RLG00000030612
rosa_multiflora	Rmu_sc0007593.1_g000009 Rmu_sc0039313.1_g000001 Rmu_sc0039399.1_g000001
rosa_roxburghii	Rroxscaffold_4G00330540
rosa_rugosa	Rorug01G0015600
rosa_samantha	Rh1AG026800 Rh1BG022900 Rh1CG024900 Rh1DG046800
rosa_wichuraiana	Rw1G001860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1475
AccBSI	CCGCTC	1 cut(s)	937
AccI	GTMKAC	1 cut(s)	390
AccIII	TCCGGA	1 cut(s)	249
AciI	CCGC	9 cut(s)	62, 121, 129, 201, 303, 405, 441, 937, 1135
AclWI	GGATC	1 cut(s)	194
AcoI	YGGCCR	1 cut(s)	893
AcsI	RAATTY	2 cut(s)	149, 557
AcuI	CTGAAG	2 cut(s)	781, 1131
AfaI	GTAC	4 cut(s)	454, 584, 1131, 1339
AfiI	CCNNNNNNNGG	4 cut(s)	61, 813, 936, 1140
AflII	CTTAAG	1 cut(s)	884
AflIII	ACRYGT	1 cut(s)	1089
AgsI	TTSAA	4 cut(s)	286, 521, 685, 1328
AhlI	ACTAGT	1 cut(s)	1400
AjiI	CACGTC	1 cut(s)	97
AjnI	CCWGG	3 cut(s)	904, 982, 996
Alw21I	GWGCWC	1 cut(s)	231
Alw26I	GTCTC	4 cut(s)	52, 418, 659, 1049
AlwI	GGATC	1 cut(s)	194
Ama87I	CYCGRG	2 cut(s)	316, 691
Aor13HI	TCCGGA	1 cut(s)	249
AoxI	GGCC	4 cut(s)	52, 828, 893, 1218
ApeKI	GCWGC	4 cut(s)	300, 329, 961, 1164
ApoI	RAATTY	2 cut(s)	149, 557
Asp700I	GAANNNNTTC	1 cut(s)	914
AspA2I	CCTAGG	1 cut(s)	812
AspLEI	GCGC	1 cut(s)	41
AspS9I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
AsuHPI	GGTGA	3 cut(s)	112, 623, 1072
AsuNHI	GCTAGC	2 cut(s)	761, 1390
AvaI	CYCGRG	2 cut(s)	316, 691
AvaII	GGWCC	4 cut(s)	118, 902, 987, 1097
AvrII	CCTAGG	1 cut(s)	812
BalI	TGGCCA	1 cut(s)	895
BanI	GGYRCC	1 cut(s)	1475
BanII	GRGCYC	1 cut(s)	231
BauI	CACGAG	1 cut(s)	1255
Bbv12I	GWGCWC	1 cut(s)	231
BbvCI	CCTCAGC	1 cut(s)	374
BbvI	GCAGC	4 cut(s)	312, 341, 973, 1176
BccI	CCATC	4 cut(s)	358, 502, 716, 844
BceAI	ACGGC	3 cut(s)	100, 418, 715
BcgI	CGANNNNNNTGC	2 cut(s)	339, 373
BciT130I	CCWGG	3 cut(s)	906, 984, 998
BclI	TGATCA	1 cut(s)	27
BcoDI	GTCTC	4 cut(s)	52, 418, 659, 1049
BcuI	ACTAGT	1 cut(s)	1400
BfaI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
BfmI	CTRYAG	1 cut(s)	1168
BfoI	RGCGCY	1 cut(s)	42
BfrI	CTTAAG	1 cut(s)	884
BglII	AGATCT	1 cut(s)	864
BisI	GCNGC	6 cut(s)	63, 301, 330, 406, 962, 1165
BlnI	CCTAGG	1 cut(s)	812
BlsI	GCNGC	6 cut(s)	64, 302, 331, 407, 963, 1166
Bme1390I	CCNGG	3 cut(s)	906, 984, 998
Bme18I	GGWCC	4 cut(s)	118, 902, 987, 1097
BmeT110I	CYCGRG	2 cut(s)	316, 691
BmgBI	CACGTC	1 cut(s)	97
BmgT120I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
BmiI	GGNNCC	6 cut(s)	178, 988, 1099, 1154, 1221, 1477
BmrFI	CCNGG	3 cut(s)	906, 984, 998
BmrI	ACTGGG	2 cut(s)	1217, 1308
BmsI	GCATC	4 cut(s)	132, 774, 1242, 1417
BmtI	GCTAGC	2 cut(s)	765, 1394
BmuI	ACTGGG	2 cut(s)	1217, 1308
BoxI	GACNNNNGTC	1 cut(s)	651
BpmI	CTGGAG	2 cut(s)	63, 1266
Bpu10I	CCTNAGC	1 cut(s)	374
BpuEI	CTTGAG	1 cut(s)	857
BsaBI	GATNNNNATC	1 cut(s)	32
BsaJI	CCNNGG	4 cut(s)	812, 905, 983, 1071
BsaWI	WCCGGW	2 cut(s)	217, 249
Bsc4I	CCNNNNNNNGG	4 cut(s)	61, 813, 936, 1140
Bse118I	RCCGGY	1 cut(s)	179
Bse1I	ACTGG	4 cut(s)	450, 1223, 1249, 1303
Bse8I	GATNNNNATC	1 cut(s)	32
BseAI	TCCGGA	1 cut(s)	249
BseBI	CCWGG	3 cut(s)	906, 984, 998
BseDI	CCNNGG	4 cut(s)	812, 905, 983, 1071
BseGI	GGATG	2 cut(s)	727, 850
BseJI	GATNNNNATC	1 cut(s)	32
BseLI	CCNNNNNNNGG	4 cut(s)	61, 813, 936, 1140
BseMII	CTCAG	4 cut(s)	365, 621, 816, 1055
BseNI	ACTGG	4 cut(s)	450, 1223, 1249, 1303
BseRI	GAGGAG	2 cut(s)	10, 1067
BseXI	GCAGC	4 cut(s)	312, 341, 973, 1176
Bsh1285I	CGRYCG	1 cut(s)	298
BshFI	GGCC	4 cut(s)	54, 830, 895, 1220
BshNI	GGYRCC	1 cut(s)	1475
BsiEI	CGRYCG	1 cut(s)	298
BsiHKAI	GWGCWC	1 cut(s)	231
BsiHKCI	CYCGRG	2 cut(s)	316, 691
BsiSI	CCGG	4 cut(s)	51, 180, 218, 250
BslFI	GGGAC	3 cut(s)	710, 1100, 1439
BslI	CCNNNNNNNGG	4 cut(s)	61, 813, 936, 1140
BsmAI	GTCTC	4 cut(s)	52, 418, 659, 1049
BsmBI	CGTCTC	3 cut(s)	418, 659, 1049
BsmFI	GGGAC	3 cut(s)	710, 1100, 1439
BsnI	GGCC	4 cut(s)	54, 830, 895, 1220
BsoBI	CYCGRG	2 cut(s)	316, 691
Bsp1286I	GDGCHC	1 cut(s)	231
Bsp13I	TCCGGA	1 cut(s)	249
Bsp143I	GATC	5 cut(s)	27, 75, 186, 295, 864
Bsp19I	CCATGG	1 cut(s)	1071
BspACI	CCGC	9 cut(s)	62, 121, 129, 201, 303, 405, 441, 937, 1135
BspANI	GGCC	4 cut(s)	54, 830, 895, 1220
BspCNI	CTCAG	4 cut(s)	366, 622, 817, 1054
BspEI	TCCGGA	1 cut(s)	249
BspLI	GGNNCC	6 cut(s)	178, 988, 1099, 1154, 1221, 1477
BspOI	GCTAGC	2 cut(s)	765, 1394
BspPI	GGATC	1 cut(s)	194
BspT107I	GGYRCC	1 cut(s)	1475
BspTI	CTTAAG	1 cut(s)	884
BsrBI	CCGCTC	1 cut(s)	937
BsrFI	RCCGGY	1 cut(s)	179
BsrI	ACTGG	4 cut(s)	450, 1223, 1249, 1303
BssAI	RCCGGY	1 cut(s)	179
BssECI	CCNNGG	4 cut(s)	812, 905, 983, 1071
BssMI	GATC	5 cut(s)	27, 75, 186, 295, 864
BssSI	CACGAG	1 cut(s)	1255
BssT1I	CCWWGG	2 cut(s)	812, 1071
Bst2BI	CACGAG	1 cut(s)	1255
Bst2UI	CCWGG	3 cut(s)	906, 984, 998
Bst4CI	ACNGT	4 cut(s)	650, 709, 1060, 1464
BstAFI	CTTAAG	1 cut(s)	884
BstC8I	GCNNGC	6 cut(s)	231, 280, 397, 477, 763, 1392
BstDEI	CTNAG	5 cut(s)	374, 630, 825, 1041, 1082
BstDSI	CCRYGG	1 cut(s)	1071
BstENI	CCTNNNNNAGG	1 cut(s)	811
BstF5I	GGATG	2 cut(s)	727, 850
BstH2I	RGCGCY	1 cut(s)	42
BstHHI	GCGC	1 cut(s)	41
BstKTI	GATC	5 cut(s)	30, 78, 189, 298, 867
BstMAI	GTCTC	4 cut(s)	52, 418, 659, 1049
BstMBI	GATC	5 cut(s)	27, 75, 186, 295, 864
BstMCI	CGRYCG	1 cut(s)	298
BstMWI	GCNNNNNNNGC	5 cut(s)	379, 405, 463, 472, 1170
BstNI	CCWGG	3 cut(s)	906, 984, 998
BstNSI	RCATGY	1 cut(s)	1093
BstPAI	GACNNNNGTC	1 cut(s)	651
BstSCI	CCNGG	3 cut(s)	904, 982, 996
BstSFI	CTRYAG	1 cut(s)	1168
BstV1I	GCAGC	4 cut(s)	312, 341, 973, 1176
BstX2I	RGATCY	1 cut(s)	864
BstXI	CCANNNNNNTGG	1 cut(s)	997
BstYI	RGATCY	1 cut(s)	864
BsuRI	GGCC	4 cut(s)	54, 830, 895, 1220
BtgI	CCRYGG	1 cut(s)	1071
BtgZI	GCGATG	2 cut(s)	377, 1464
BtrI	CACGTC	1 cut(s)	97
BtsCI	GGATG	2 cut(s)	727, 850
BtsI	GCAGTG	2 cut(s)	357, 1308
BtsIMutI	CAGTG	3 cut(s)	357, 1242, 1308
Cac8I	GCNNGC	6 cut(s)	231, 280, 397, 477, 763, 1392
CfoI	GCGC	1 cut(s)	41
Cfr10I	RCCGGY	1 cut(s)	179
Cfr13I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
CpoI	CGGWCCG	1 cut(s)	118
CseI	GACGC	2 cut(s)	401, 718
Csp6I	GTAC	4 cut(s)	453, 583, 1130, 1338
CspCI	CAANNNNNGTGG	2 cut(s)	1014, 1049
CspI	CGGWCCG	1 cut(s)	118
CviAII	CATG	6 cut(s)	897, 932, 967, 1072, 1090, 1283
CviQI	GTAC	4 cut(s)	453, 583, 1130, 1338
DdeI	CTNAG	5 cut(s)	374, 630, 825, 1041, 1082
DpnI	GATC	5 cut(s)	29, 77, 188, 297, 866
DpnII	GATC	5 cut(s)	27, 75, 186, 295, 864
EaeI	YGGCCR	1 cut(s)	893
EciI	GGCGGA	1 cut(s)	216
Ecl136II	GAGCTC	1 cut(s)	229
Eco130I	CCWWGG	2 cut(s)	812, 1071
Eco24I	GRGCYC	1 cut(s)	231
Eco32I	GATATC	1 cut(s)	1213
Eco47I	GGWCC	4 cut(s)	118, 902, 987, 1097
Eco53kI	GAGCTC	1 cut(s)	229
Eco57I	CTGAAG	2 cut(s)	781, 1131
Eco88I	CYCGRG	2 cut(s)	316, 691
EcoICRI	GAGCTC	1 cut(s)	229
EcoNI	CCTNNNNNAGG	1 cut(s)	811
EcoO109I	RGGNCCY	1 cut(s)	1219
EcoRI	GAATTC	1 cut(s)	149
EcoRII	CCWGG	3 cut(s)	904, 982, 996
EcoRV	GATATC	1 cut(s)	1213
EcoT14I	CCWWGG	2 cut(s)	812, 1071
EcoT22I	ATGCAT	1 cut(s)	979
EcoT38I	GRGCYC	1 cut(s)	231
ErhI	CCWWGG	2 cut(s)	812, 1071
Esp3I	CGTCTC	3 cut(s)	418, 659, 1049
FaeI	CATG	6 cut(s)	900, 935, 970, 1075, 1093, 1286
FaqI	GGGAC	3 cut(s)	710, 1100, 1439
FatI	CATG	6 cut(s)	896, 931, 966, 1071, 1089, 1282
FauI	CCCGC	2 cut(s)	296, 1142
FbaI	TGATCA	1 cut(s)	27
FblI	GTMKAC	1 cut(s)	390
Fnu4HI	GCNGC	6 cut(s)	63, 301, 330, 406, 962, 1165
FokI	GGATG	2 cut(s)	734, 857
FriOI	GRGCYC	1 cut(s)	231
Fsp4HI	GCNGC	6 cut(s)	63, 301, 330, 406, 962, 1165
FspBI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
GlaI	GCGC	1 cut(s)	40
GluI	GCNGC	6 cut(s)	63, 301, 330, 406, 962, 1165
GsuI	CTGGAG	2 cut(s)	63, 1266
HaeII	RGCGCY	1 cut(s)	42
HaeIII	GGCC	4 cut(s)	54, 830, 895, 1220
HapII	CCGG	4 cut(s)	51, 180, 218, 250
HgaI	GACGC	2 cut(s)	401, 718
HhaI	GCGC	1 cut(s)	41
Hin1II	CATG	6 cut(s)	900, 935, 970, 1075, 1093, 1286
Hin6I	GCGC	1 cut(s)	39
HinP1I	GCGC	1 cut(s)	39
HincII	GTYRAC	1 cut(s)	391
HindII	GTYRAC	1 cut(s)	391
HindIII	AAGCTT	1 cut(s)	111
HpaII	CCGG	4 cut(s)	51, 180, 218, 250
HphI	GGTGA	3 cut(s)	112, 623, 1072
Hpy166II	GTNNAC	4 cut(s)	323, 391, 803, 1406
Hpy188III	TCNNGA	9 cut(s)	79, 107, 250, 316, 505, 677, 1003, 1109, 1208
Hpy8I	GTNNAC	4 cut(s)	323, 391, 803, 1406
Hpy99I	CGWCG	3 cut(s)	18, 194, 395
HpyAV	CCTTC	2 cut(s)	340, 805
HpyCH4III	ACNGT	4 cut(s)	650, 709, 1060, 1464
HpyCH4IV	ACGT	3 cut(s)	96, 411, 1370
HpyCH4V	TGCA	5 cut(s)	569, 977, 1233, 1289, 1313
HpyF10VI	GCNNNNNNNGC	5 cut(s)	379, 405, 463, 472, 1170
HpyF3I	CTNAG	5 cut(s)	374, 630, 825, 1041, 1082
HpySE526I	ACGT	3 cut(s)	96, 411, 1370
Hsp92II	CATG	6 cut(s)	900, 935, 970, 1075, 1093, 1286
HspAI	GCGC	1 cut(s)	39
Kpn2I	TCCGGA	1 cut(s)	249
Ksp22I	TGATCA	1 cut(s)	27
Kzo9I	GATC	5 cut(s)	27, 75, 186, 295, 864
LmnI	GCTCC	5 cut(s)	23, 169, 176, 226, 379
Lsp1109I	GCAGC	4 cut(s)	312, 341, 973, 1176
LweI	GCATC	4 cut(s)	132, 774, 1242, 1417
MaeI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
MaeII	ACGT	3 cut(s)	96, 411, 1370
MaeIII	GTNAC	3 cut(s)	421, 703, 1003
MalI	GATC	5 cut(s)	29, 77, 188, 297, 866
MbiI	CCGCTC	1 cut(s)	937
MboI	GATC	5 cut(s)	27, 75, 186, 295, 864
MboII	GAAGA	5 cut(s)	874, 910, 1228, 1231, 1340
MflI	RGATCY	1 cut(s)	864
MhlI	GDGCHC	1 cut(s)	231
MlsI	TGGCCA	1 cut(s)	895
MluCI	AATT	6 cut(s)	149, 557, 680, 742, 839, 1410
MluNI	TGGCCA	1 cut(s)	895
MlyI	GAGTC	6 cut(s)	54, 204, 318, 329, 780, 1447
MmeI	TCCRAC	2 cut(s)	164, 172
Mox20I	TGGCCA	1 cut(s)	895
Mph1103I	ATGCAT	1 cut(s)	979
MroI	TCCGGA	1 cut(s)	249
MroXI	GAANNNNTTC	1 cut(s)	914
MscI	TGGCCA	1 cut(s)	895
MseI	TTAA	2 cut(s)	213, 885
Msp20I	TGGCCA	1 cut(s)	895
MspA1I	CMGCKG	2 cut(s)	303, 1137
MspCI	CTTAAG	1 cut(s)	884
MspI	CCGG	4 cut(s)	51, 180, 218, 250
MspR9I	CCNGG	3 cut(s)	906, 984, 998
MvaI	CCWGG	3 cut(s)	906, 984, 998
MwoI	GCNNNNNNNGC	5 cut(s)	379, 405, 463, 472, 1170
NcoI	CCATGG	1 cut(s)	1071
NdeII	GATC	5 cut(s)	27, 75, 186, 295, 864
NheI	GCTAGC	2 cut(s)	761, 1390
NlaIII	CATG	6 cut(s)	900, 935, 970, 1075, 1093, 1286
NlaIV	GGNNCC	6 cut(s)	178, 988, 1099, 1154, 1221, 1477
NmeAIII	GCCGAG	1 cut(s)	259
NmuCI	GTSAC	1 cut(s)	1003
NsiI	ATGCAT	1 cut(s)	979
NspI	RCATGY	1 cut(s)	1093
PaeR7I	CTCGAG	1 cut(s)	691
PciI	ACATGT	1 cut(s)	1089
PcsI	WCGNNNNNNNCGW	3 cut(s)	84, 408, 705
PdmI	GAANNNNTTC	1 cut(s)	914
PfeI	GAWTC	5 cut(s)	103, 136, 307, 356, 1022
PkrI	GCNGC	6 cut(s)	64, 302, 331, 407, 963, 1166
Ple19I	CGATCG	1 cut(s)	298
PleI	GAGTC	6 cut(s)	53, 203, 318, 329, 779, 1446
PpsI	GAGTC	6 cut(s)	53, 203, 318, 329, 779, 1446
PscI	ACATGT	1 cut(s)	1089
PshAI	GACNNNNGTC	1 cut(s)	651
Psp124BI	GAGCTC	1 cut(s)	231
Psp6I	CCWGG	3 cut(s)	904, 982, 996
PspGI	CCWGG	3 cut(s)	904, 982, 996
PspN4I	GGNNCC	6 cut(s)	178, 988, 1099, 1154, 1221, 1477
PspPI	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
PspXI	VCTCGAGB	1 cut(s)	691
PsuI	RGATCY	1 cut(s)	864
PvuI	CGATCG	1 cut(s)	298
RsaI	GTAC	4 cut(s)	454, 584, 1131, 1339
RsaNI	GTAC	4 cut(s)	453, 583, 1130, 1338
Rsr2I	CGGWCCG	1 cut(s)	118
RsrII	CGGWCCG	1 cut(s)	118
SacI	GAGCTC	1 cut(s)	231
SalI	GTCGAC	1 cut(s)	389
SaqAI	TTAA	2 cut(s)	213, 885
SatI	GCNGC	6 cut(s)	63, 301, 330, 406, 962, 1165
Sau3AI	GATC	5 cut(s)	27, 75, 186, 295, 864
Sau96I	GGNCC	5 cut(s)	118, 902, 987, 1097, 1219
SchI	GAGTC	6 cut(s)	54, 204, 318, 329, 780, 1447
ScrFI	CCNGG	3 cut(s)	906, 984, 998
SduI	GDGCHC	1 cut(s)	231
SfaNI	GCATC	4 cut(s)	132, 774, 1242, 1417
SfcI	CTRYAG	1 cut(s)	1168
Sfr274I	CTCGAG	1 cut(s)	691
SinI	GGWCC	4 cut(s)	118, 902, 987, 1097
SlaI	CTCGAG	1 cut(s)	691
SmlI	CTYRAG	3 cut(s)	691, 872, 884
SmoI	CTYRAG	3 cut(s)	691, 872, 884
SpeI	ACTAGT	1 cut(s)	1400
Sse9I	AATT	6 cut(s)	149, 557, 680, 742, 839, 1410
SsiI	CCGC	9 cut(s)	62, 121, 129, 201, 303, 405, 441, 937, 1135
SspMI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
SstI	GAGCTC	1 cut(s)	231
StyD4I	CCNGG	3 cut(s)	904, 982, 996
StyI	CCWWGG	2 cut(s)	812, 1071
TaaI	ACNGT	4 cut(s)	650, 709, 1060, 1464
TaiI	ACGT	3 cut(s)	99, 414, 1373
TaqI	TCGA	6 cut(s)	78, 108, 390, 504, 692, 1436
TasI	AATT	6 cut(s)	149, 557, 680, 742, 839, 1410
TauI	GCSGC	2 cut(s)	65, 408
TfiI	GAWTC	5 cut(s)	103, 136, 307, 356, 1022
Tru1I	TTAA	2 cut(s)	213, 885
Tru9I	TTAA	2 cut(s)	213, 885
TscAI	CASTG	3 cut(s)	357, 1249, 1315
TseFI	GTSAC	1 cut(s)	1003
TseI	GCWGC	4 cut(s)	300, 329, 961, 1164
Tsp45I	GTSAC	1 cut(s)	1003
TspDTI	ATGAA	3 cut(s)	588, 910, 1271
TspGWI	ACGGA	2 cut(s)	13, 731
TspRI	CASTG	3 cut(s)	357, 1249, 1315
Vha464I	CTTAAG	1 cut(s)	884
VpaK11BI	GGWCC	4 cut(s)	118, 902, 987, 1097
XagI	CCTNNNNNAGG	1 cut(s)	811
XapI	RAATTY	2 cut(s)	149, 557
XceI	RCATGY	1 cut(s)	1093
XcmI	CCANNNNNNNNNTGG	1 cut(s)	838
XhoI	CTCGAG	1 cut(s)	691
XmaJI	CCTAGG	1 cut(s)	812
XmiI	GTMKAC	1 cut(s)	390
XmnI	GAANNNNTTC	1 cut(s)	914
XspI	CTAG	5 cut(s)	762, 813, 1391, 1401, 1507
Zsp2I	ATGCAT	1 cut(s)	979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.