MD07G1082000.v1.1

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
8031036 .. 8037594
6559 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1082000.v1.1.491

Sequence Viewer

Length: 1470 bp
ATGGCTGGTGGTGGAGAAGGTCCAACGCTAGAGTTCACGCCAACATGGGTGGTGGCGGTGGTGTGCACGGTCATCGTGGCTATATCTCTCGCGGTAGAGCGGGCCCTACACTCCGGCGGCAAGTACTTGAAAAAGAAGAAGCAGAAGCCGCTGTACGAGGCGTTGCTCAAGGTGAAGGAGGAGCTGATGCTGCTGGGGTTTATCTCTCTCCTCCTCACTGTCTTTCAGAACAGGATCACCAAAATCTGCGTGAACCCTAAGATTATGGACAAGTGGCTGCCATGCAAACTCCACCATGACGGTCATCTGGACGGCAAAGAAACAGCCCATTACTCCGCCACCTCCGTGTTTGGCGGCATTTTTGGACCTACCAGGAGGCTGCTGGCTGCCGGGGCTAAGGCTCAACAGGGTTACTGTGGCAAAAAGAATAAGGTACCATTGCTATCAGTTGAGGCATTCCATCACCTGCACATCTTTATCTTTGTCCTAGCCATTGTCCATGTGACTTTCTGTGCTCTCACTATTGTCTTCGGAGGTTTAAAGATACGTCAATGGAAACAATGGGAGGAGGAAAATGCAAAAGAGATTAGTGAAGTAGATGAAGCTCAAACAAAGATCACCCATGTTCAGGAGCATGACTTTGTCAAGGATCACTTTTGGGGTATCGGTAAAAATTATCGTGTGAAGGGATGGCTGCATTCTTTCCTCAACCAGTTTTATGGATCAGTGTGCAGATCAGACTACTTGACTTTGCGACTCGGTTTCATCTCGACCCATTGCAGGGGAAACCCCAAGTTTAATTTCTACACGTACATGGTACGCGCCCTTGAAGATGATTTTAAAAGAGTCGTCGGTATCAGTTGGTATCTTTGGATATTTGTGGTCATCTTCATGCTTATGAATGTCGATGGATGGCATGCATACTTCTGGATTGCATTTATTCCTTTCTTTCTTCTACTTGCTGTTGGAACTAAGCTGCAGCACGTAATCACCCAGTTAGCTCATGAAGTTGCTGAGAAGCATATCGCCGTAGAAGGAGAACTAATAGTTCAACCATCAGACAAGCACTTTTGGTTTGGCAAGCCCAAATTTGTTCTCTTCTTGATTCATCTCATCCTCTTCCAAAATGCTTTCGAAATGGCATTCTTTTTCTGGATATGGGTTCAATATGGTTTTACATCTTGCATAATGGGAAAAGTAAGATACATTGTCCCCAGGCTTGTTATTGGGGTGTTCATTCAGGTGCTCTGTAGTTACAGTACTCTACCACTTTATGCCATTGTCACGCAGATGGGAACCAAATTCAAGAAAGCAATATTCGACGAGGGTATACGCTCGGGACTTATTGGTTGGGCTCAGAAGGCAAAGAAAAGGAAGGCGAGCAGCGTCGACGGATCTGGATCTACCTCTGGTTCCTCCGTGGGAGTTCAGCTAGGCAAAGTTAACCAAAAGACAACGACCAAGGGCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

490

Amino Acids

55.5

Weight (kDa)

9.52

Isoelectric Point (pI)

20.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 9 - 469 5e-190 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015815)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 474
Acc36I ACCTGC 1 cut(s) 474
Acc65I GGTACC 1 cut(s) 433
AccB1I GGYRCC 1 cut(s) 433
AccBSI CCGCTC 1 cut(s) 100
AccI GTMKAC 2 cut(s) 1330, 1389
AccII CGCG 2 cut(s) 92, 822
AciI CCGC 7 cut(s) 56, 92, 100, 117, 149, 336, 354
AclWI GGATC 5 cut(s) 242, 657, 730, 1402, 1408
AcsI RAATTY 2 cut(s) 1088, 1301
AfaI GTAC 6 cut(s) 125, 155, 435, 812, 819, 1261
AfiI CCNNNNNNNGG 3 cut(s) 628, 780, 781
AflIII ACRYGT 1 cut(s) 807
AgsI TTSAA 5 cut(s) 130, 830, 1052, 1166, 1306
AjnI CCWGG 2 cut(s) 371, 1214
AjuI GAANNNNNNNTTGG 2 cut(s) 785, 817
AleI CACNNNNGTG 1 cut(s) 344
AluBI AGCT 5 cut(s) 184, 605, 976, 1001, 1432
AluI AGCT 5 cut(s) 184, 605, 976, 1001, 1432
Alw21I GWGCWC 3 cut(s) 68, 517, 1248
Alw44I GTGCAC 1 cut(s) 64
AlwI GGATC 5 cut(s) 242, 657, 730, 1402, 1408
Ama87I CYCGRG 1 cut(s) 1336
AoxI GGCC 1 cut(s) 102
ApaI GGGCCC 1 cut(s) 106
ApaLI GTGCAC 1 cut(s) 64
ApeKI GCWGC 8 cut(s) 190, 277, 379, 386, 694, 976, 979, 1383
ApoI RAATTY 2 cut(s) 1088, 1301
Asp718I GGTACC 1 cut(s) 433
AspLEI GCGC 1 cut(s) 824
AspS9I GGNCC 4 cut(s) 20, 102, 103, 365
AsuC2I CCSGG 1 cut(s) 391
AsuHPI GGTGA 5 cut(s) 184, 229, 455, 610, 982
AsuII TTCGAA 1 cut(s) 1134
AvaI CYCGRG 1 cut(s) 1336
AvaII GGWCC 2 cut(s) 20, 365
BaeGI GKGCMC 2 cut(s) 68, 106
BanI GGYRCC 1 cut(s) 433
BanII GRGCYC 2 cut(s) 106, 1357
BarI GAAGNNNNNNTAC 2 cut(s) 137, 169
BbsI GAAGAC 1 cut(s) 520
Bbv12I GWGCWC 3 cut(s) 68, 517, 1248
BbvI GCAGC 8 cut(s) 177, 264, 366, 373, 681, 963, 991, 1395
BccI CCATC 6 cut(s) 468, 684, 902, 906, 1063, 1285
BceAI ACGGC 2 cut(s) 328, 1013
BcgI CGANNNNNNTGC 2 cut(s) 55, 89
BciT130I CCWGG 2 cut(s) 373, 1216
BcnI CCSGG 1 cut(s) 391
BfaI CTAG 3 cut(s) 29, 488, 1433
BfmI CTRYAG 2 cut(s) 977, 1249
BfuAI ACCTGC 1 cut(s) 474
BmcAI AGTACT 2 cut(s) 125, 1261
Bme1390I CCNGG 3 cut(s) 373, 391, 1216
Bme18I GGWCC 2 cut(s) 20, 365
BmeT110I CYCGRG 1 cut(s) 1336
BmgT120I GGNCC 4 cut(s) 20, 102, 103, 365
BmiI GGNNCC 4 cut(s) 104, 435, 1297, 1414
BmrFI CCNGG 3 cut(s) 373, 391, 1216
BmrI ACTGGG 1 cut(s) 988
BmsI GCATC 1 cut(s) 177
BmuI ACTGGG 1 cut(s) 988
BpiI GAAGAC 1 cut(s) 520
Bpu10I CCTNAGC 1 cut(s) 396
Bpu14I TTCGAA 1 cut(s) 1134
BpuEI CTTGAG 1 cut(s) 152
BpuMI CCSGG 1 cut(s) 391
BsaAI YACGTR 2 cut(s) 810, 985
BsaBI GATNNNNATC 1 cut(s) 1399
BsaJI CCNNGG 4 cut(s) 390, 1214, 1419, 1461
Bsc4I CCNNNNNNNGG 3 cut(s) 628, 780, 781
Bse1I ACTGG 2 cut(s) 712, 994
Bse3DI GCAATG 2 cut(s) 437, 775
Bse8I GATNNNNATC 1 cut(s) 1399
BseBI CCWGG 2 cut(s) 373, 1216
BseDI CCNNGG 4 cut(s) 390, 1214, 1419, 1461
BseGI GGATG 3 cut(s) 695, 917, 1113
BseJI GATNNNNATC 1 cut(s) 1399
BseLI CCNNNNNNNGG 3 cut(s) 628, 780, 781
BseMI GCAATG 2 cut(s) 437, 775
BseMII CTCAG 2 cut(s) 1005, 1370
BseNI ACTGG 2 cut(s) 712, 994
BseRI GAGGAG 4 cut(s) 194, 200, 203, 581
BseSI GKGCMC 2 cut(s) 68, 106
BseXI GCAGC 8 cut(s) 177, 264, 366, 373, 681, 963, 991, 1395
BseYI CCCAGC 1 cut(s) 193
BsgI GTGCAG 2 cut(s) 452, 751
Bsh1236I CGCG 2 cut(s) 92, 822
BshFI GGCC 1 cut(s) 104
BshNI GGYRCC 1 cut(s) 433
BsiHKAI GWGCWC 3 cut(s) 68, 517, 1248
BsiHKCI CYCGRG 1 cut(s) 1336
BsiSI CCGG 2 cut(s) 114, 390
BslFI GGGAC 2 cut(s) 1196, 1353
BslI CCNNNNNNNGG 3 cut(s) 628, 780, 781
BsmFI GGGAC 2 cut(s) 1196, 1353
BsmI GAATGC 3 cut(s) 455, 697, 1142
BsnI GGCC 1 cut(s) 104
BsoBI CYCGRG 1 cut(s) 1336
Bsp119I TTCGAA 1 cut(s) 1134
Bsp120I GGGCCC 1 cut(s) 102
Bsp1286I GDGCHC 5 cut(s) 68, 106, 517, 1248, 1357
Bsp143I GATC 7 cut(s) 234, 615, 649, 722, 734, 1394, 1400
BspACI CCGC 7 cut(s) 56, 92, 100, 117, 149, 336, 354
BspANI GGCC 1 cut(s) 104
BspCNI CTCAG 2 cut(s) 1006, 1369
BspFNI CGCG 2 cut(s) 92, 822
BspHI TCATGA 1 cut(s) 1003
BspLI GGNNCC 4 cut(s) 104, 435, 1297, 1414
BspMAI CTGCAG 1 cut(s) 981
BspMI ACCTGC 1 cut(s) 474
BspPI GGATC 5 cut(s) 242, 657, 730, 1402, 1408
BspT104I TTCGAA 1 cut(s) 1134
BspT107I GGYRCC 1 cut(s) 433
BsrBI CCGCTC 1 cut(s) 100
BsrDI GCAATG 2 cut(s) 437, 775
BsrI ACTGG 2 cut(s) 712, 994
BssECI CCNNGG 4 cut(s) 390, 1214, 1419, 1461
BssMI GATC 7 cut(s) 234, 615, 649, 722, 734, 1394, 1400
BssNAI GTATAC 1 cut(s) 1331
BssT1I CCWWGG 1 cut(s) 1461
Bst1107I GTATAC 1 cut(s) 1331
Bst2UI CCWGG 2 cut(s) 373, 1216
Bst4CI ACNGT 5 cut(s) 70, 220, 302, 416, 1259
Bst6I CTCTTC 2 cut(s) 1103, 1124
BstBAI YACGTR 2 cut(s) 810, 985
BstBI TTCGAA 1 cut(s) 1134
BstC8I GCNNGC 5 cut(s) 102, 384, 918, 1082, 1381
BstDEI CTNAG 5 cut(s) 258, 396, 972, 1014, 1356
BstDSI CCRYGG 1 cut(s) 1419
BstF5I GGATG 3 cut(s) 695, 917, 1113
BstFNI CGCG 2 cut(s) 92, 822
BstHHI GCGC 1 cut(s) 824
BstKTI GATC 7 cut(s) 237, 618, 652, 725, 737, 1397, 1403
BstMBI GATC 7 cut(s) 234, 615, 649, 722, 734, 1394, 1400
BstMWI GCNNNNNNNGC 4 cut(s) 148, 190, 392, 1361
BstNI CCWGG 2 cut(s) 373, 1216
BstNSI RCATGY 1 cut(s) 920
BstSCI CCNGG 3 cut(s) 371, 389, 1214
BstSFI CTRYAG 2 cut(s) 977, 1249
BstSLI GKGCMC 2 cut(s) 68, 106
BstUI CGCG 2 cut(s) 92, 822
BstV1I GCAGC 8 cut(s) 177, 264, 366, 373, 681, 963, 991, 1395
BstV2I GAAGAC 1 cut(s) 520
BstX2I RGATCY 2 cut(s) 1394, 1400
BstXI CCANNNNNNTGG 1 cut(s) 719
BstYI RGATCY 2 cut(s) 1394, 1400
BstZ17I GTATAC 1 cut(s) 1331
BsuRI GGCC 1 cut(s) 104
BtgI CCRYGG 1 cut(s) 1419
BtsCI GGATG 3 cut(s) 695, 917, 1113
BtsIMutI CAGTG 2 cut(s) 216, 732
BveI ACCTGC 1 cut(s) 474
Cac8I GCNNGC 5 cut(s) 102, 384, 918, 1082, 1381
CciI TCATGA 1 cut(s) 1003
CfoI GCGC 1 cut(s) 824
Cfr13I GGNCC 4 cut(s) 20, 102, 103, 365
CseI GACGC 1 cut(s) 1375
Csp6I GTAC 6 cut(s) 124, 154, 434, 811, 818, 1260
CspCI CAANNNNNGTGG 2 cut(s) 30, 65
CviQI GTAC 6 cut(s) 124, 154, 434, 811, 818, 1260
DdeI CTNAG 5 cut(s) 258, 396, 972, 1014, 1356
DpnI GATC 7 cut(s) 236, 617, 651, 724, 736, 1396, 1402
DpnII GATC 7 cut(s) 234, 615, 649, 722, 734, 1394, 1400
DraI TTTAAA 2 cut(s) 540, 841
Eam1104I CTCTTC 2 cut(s) 1103, 1124
EarI CTCTTC 2 cut(s) 1103, 1124
EciI GGCGGA 1 cut(s) 325
Eco130I CCWWGG 1 cut(s) 1461
Eco24I GRGCYC 2 cut(s) 106, 1357
Eco47I GGWCC 2 cut(s) 20, 365
Eco88I CYCGRG 1 cut(s) 1336
EcoO109I RGGNCCY 1 cut(s) 103
EcoRII CCWGG 2 cut(s) 371, 1214
EcoT14I CCWWGG 1 cut(s) 1461
EcoT22I ATGCAT 1 cut(s) 922
EcoT38I GRGCYC 2 cut(s) 106, 1357
ErhI CCWWGG 1 cut(s) 1461
FalI AAGNNNNNCTT 2 cut(s) 638, 670
FaqI GGGAC 2 cut(s) 1196, 1353
FauI CCCGC 1 cut(s) 93
FblI GTMKAC 2 cut(s) 1330, 1389
FokI GGATG 3 cut(s) 702, 924, 1100
FriOI GRGCYC 2 cut(s) 106, 1357
FspBI CTAG 3 cut(s) 29, 488, 1433
GlaI GCGC 1 cut(s) 823
GsaI CCCAGC 1 cut(s) 197
HaeIII GGCC 1 cut(s) 104
HapII CCGG 2 cut(s) 114, 390
HgaI GACGC 1 cut(s) 1375
HhaI GCGC 1 cut(s) 824
Hin6I GCGC 1 cut(s) 822
HinP1I GCGC 1 cut(s) 822
HincII GTYRAC 2 cut(s) 1390, 1444
HindII GTYRAC 2 cut(s) 1390, 1444
HinfI GANTC 3 cut(s) 756, 846, 1105
HpaI GTTAAC 1 cut(s) 1444
HpaII CCGG 2 cut(s) 114, 390
HphI GGTGA 5 cut(s) 184, 229, 455, 610, 982
Hpy166II GTNNAC 6 cut(s) 36, 66, 253, 1331, 1390, 1444
Hpy188I TCNGA 5 cut(s) 228, 533, 739, 1060, 1359
Hpy8I GTNNAC 6 cut(s) 36, 66, 253, 1331, 1390, 1444
Hpy99I CGWCG 4 cut(s) 854, 1325, 1391, 1394
HpyAV CCTTC 6 cut(s) 11, 169, 679, 1028, 1354, 1369
HpyCH4III ACNGT 5 cut(s) 70, 220, 302, 416, 1259
HpyCH4IV ACGT 3 cut(s) 547, 809, 984
HpyF10VI GCNNNNNNNGC 4 cut(s) 148, 190, 392, 1361
HpyF3I CTNAG 5 cut(s) 258, 396, 972, 1014, 1356
HpySE526I ACGT 3 cut(s) 547, 809, 984
HspAI GCGC 1 cut(s) 822
KpnI GGTACC 1 cut(s) 437
KspAI GTTAAC 1 cut(s) 1444
Kzo9I GATC 7 cut(s) 234, 615, 649, 722, 734, 1394, 1400
LmnI GCTCC 2 cut(s) 181, 631
Lsp1109I GCAGC 8 cut(s) 177, 264, 366, 373, 681, 963, 991, 1395
LweI GCATC 1 cut(s) 177
MaeI CTAG 3 cut(s) 29, 488, 1433
MaeII ACGT 3 cut(s) 547, 809, 984
MaeIII GTNAC 4 cut(s) 410, 502, 1253, 1282
MalI GATC 7 cut(s) 236, 617, 651, 724, 736, 1396, 1402
MbiI CCGCTC 1 cut(s) 100
MboI GATC 7 cut(s) 234, 615, 649, 722, 734, 1394, 1400
MboII GAAGA 7 cut(s) 148, 520, 842, 880, 944, 1090, 1111
MflI RGATCY 2 cut(s) 1394, 1400
MhlI GDGCHC 5 cut(s) 68, 106, 517, 1248, 1357
MluCI AATT 4 cut(s) 673, 799, 1088, 1301
MlyI GAGTC 2 cut(s) 750, 855
MmeI TCCRAC 2 cut(s) 47, 946
Mph1103I ATGCAT 1 cut(s) 922
MseI TTAA 4 cut(s) 539, 798, 840, 1443
MslI CAYNNNNRTG 6 cut(s) 344, 812, 890, 896, 1241, 1289
MspA1I CMGCKG 1 cut(s) 151
MspI CCGG 2 cut(s) 114, 390
MspR9I CCNGG 3 cut(s) 373, 391, 1216
Mva1269I GAATGC 3 cut(s) 455, 697, 1142
MvaI CCWGG 2 cut(s) 373, 1216
MvnI CGCG 2 cut(s) 92, 822
MwoI GCNNNNNNNGC 4 cut(s) 148, 190, 392, 1361
NciI CCSGG 1 cut(s) 391
NdeII GATC 7 cut(s) 234, 615, 649, 722, 734, 1394, 1400
NlaIV GGNNCC 4 cut(s) 104, 435, 1297, 1414
NmuCI GTSAC 2 cut(s) 502, 1282
NsiI ATGCAT 1 cut(s) 922
NspI RCATGY 1 cut(s) 920
NspV TTCGAA 1 cut(s) 1134
OliI CACNNNNGTG 1 cut(s) 344
PaeI GCATGC 1 cut(s) 920
PagI TCATGA 1 cut(s) 1003
PaqCI CACCTGC 1 cut(s) 474
PctI GAATGC 3 cut(s) 455, 697, 1142
PfeI GAWTC 1 cut(s) 1105
PflFI GACNNNGTC 1 cut(s) 641
PleI GAGTC 2 cut(s) 750, 854
PpsI GAGTC 2 cut(s) 750, 854
Ppu21I YACGTR 2 cut(s) 810, 985
Psp6I CCWGG 2 cut(s) 371, 1214
PspFI CCCAGC 1 cut(s) 193
PspGI CCWGG 2 cut(s) 371, 1214
PspN4I GGNNCC 4 cut(s) 104, 435, 1297, 1414
PspOMI GGGCCC 1 cut(s) 102
PspPI GGNCC 4 cut(s) 20, 102, 103, 365
PstI CTGCAG 1 cut(s) 981
PsuI RGATCY 2 cut(s) 1394, 1400
PsyI GACNNNGTC 1 cut(s) 641
RsaI GTAC 6 cut(s) 125, 155, 435, 812, 819, 1261
RsaNI GTAC 6 cut(s) 124, 154, 434, 811, 818, 1260
RseI CAYNNNNRTG 6 cut(s) 344, 812, 890, 896, 1241, 1289
SalI GTCGAC 1 cut(s) 1388
SaqAI TTAA 4 cut(s) 539, 798, 840, 1443
Sau3AI GATC 7 cut(s) 234, 615, 649, 722, 734, 1394, 1400
Sau96I GGNCC 4 cut(s) 20, 102, 103, 365
ScaI AGTACT 2 cut(s) 125, 1261
SchI GAGTC 2 cut(s) 750, 855
ScrFI CCNGG 3 cut(s) 373, 391, 1216
SduI GDGCHC 5 cut(s) 68, 106, 517, 1248, 1357
SfaNI GCATC 1 cut(s) 177
SfcI CTRYAG 2 cut(s) 977, 1249
SfuI TTCGAA 1 cut(s) 1134
SgrDI CGTCGACG 1 cut(s) 1388
SinI GGWCC 2 cut(s) 20, 365
SmiMI CAYNNNNRTG 6 cut(s) 344, 812, 890, 896, 1241, 1289
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
SphI GCATGC 1 cut(s) 920
Sse9I AATT 4 cut(s) 673, 799, 1088, 1301
SsiI CCGC 7 cut(s) 56, 92, 100, 117, 149, 336, 354
SspI AATATT 1 cut(s) 1317
SspMI CTAG 3 cut(s) 29, 488, 1433
StyD4I CCNGG 3 cut(s) 371, 389, 1214
StyI CCWWGG 1 cut(s) 1461
TaaI ACNGT 5 cut(s) 70, 220, 302, 416, 1259
TaiI ACGT 3 cut(s) 550, 812, 987
TaqI TCGA 5 cut(s) 770, 906, 1134, 1320, 1389
TasI AATT 4 cut(s) 673, 799, 1088, 1301
TatI WGTACW 2 cut(s) 123, 1259
TauI GCSGC 3 cut(s) 120, 151, 357
TfiI GAWTC 1 cut(s) 1105
Tru1I TTAA 4 cut(s) 539, 798, 840, 1443
Tru9I TTAA 4 cut(s) 539, 798, 840, 1443
TscAI CASTG 2 cut(s) 223, 732
TseFI GTSAC 2 cut(s) 502, 1282
TseI GCWGC 8 cut(s) 190, 277, 379, 386, 694, 976, 979, 1383
Tsp45I GTSAC 2 cut(s) 502, 1282
TspDTI ATGAA 7 cut(s) 615, 754, 880, 914, 1020, 1097, 1225
TspGWI ACGGA 3 cut(s) 334, 1407, 1408
TspRI CASTG 2 cut(s) 223, 732
Tth111I GACNNNGTC 1 cut(s) 641
VneI GTGCAC 1 cut(s) 64
VpaK11BI GGWCC 2 cut(s) 20, 365
XapI RAATTY 2 cut(s) 1088, 1301
XceI RCATGY 1 cut(s) 920
XcmI CCANNNNNNNNNTGG 1 cut(s) 379
XmiI GTMKAC 2 cut(s) 1330, 1389
XspI CTAG 3 cut(s) 29, 488, 1433
ZrmI AGTACT 2 cut(s) 125, 1261
Zsp2I ATGCAT 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.