Prupe.2G107600_v2.0.a1

May be involved in modulation of pathogen defense and leaf cell death

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0015815
Physical Location & Seq
Reverse (-)
16507691 .. 16516057
8367 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G107600.1

Sequence Viewer

Length: 1467 bp
ATGGCTGGAGGTGGGGAAGGTCCAACTCTAGAGTTCACGCCAACATGGGTTGTGGCTGTGGTTTGCACTGTGATCGTAGGCATTTCTCTCGCCGCCGAGCGAGCCCTACATTCAGGAGGCAAGTACTTGAGGAGGAAGAAGCAGAAGCCTCTGTATGAGGCCTTGCTCAAGGTTAAAGAAGAGCTTATGTTGCTGGGCTTCATCTCTCTCCTCCTCACTGTTTTCCAAAACAGGATCACCAAAATCTGTGTGAAGCCTGAGATTATGGACAAGTGGCTGCCATGCAGTCTCCAACATAATGATCAAACAAATGAGGAAATGGATGATGCCCATTTTTCCACCTCCTTGTCTGGGGGCATTGCTGGGCAAACCAGGAGGCTTCTTGCTGCTGGAGGTGAGGCTCAACAGGGGTACTGTGGAAAAAAGCACAAGGTACCTCTGTTATCAGTTGAGGCATTCCACCACCTGCACATCTTTATCTTTGTCCTAGCCATTGTCCATGTGACCTTCTGTGCTCTCACTATTGTTTTCGGAGGGTTAAAGATACATCAATGGAAAAAGTGGGAGGATGAACATTCAAAAGAGATTAATGAGGCAGATGAAGTTCAAGTAAAGATCACCCATGTCCAGGAGCATGATTTTGTCAAGGACCATTTTTGGGGTATTGGTAAAAATTATTATCTGATGGGTTGCCTACATTCTTTTCTCAATCAGTTTTATGGATCGGTGACCAGATCAGACTACTTGACTTTGCGACTGGGTTTCATTACGACCCATTGCAGGGGTAACCCCAAGTTTAATTTTCACACATACATGGTTCGCGCCCTTGAAGATGATTTTAAAAGAGTCGTTGGTATCAGTTGGTATCTGTGGATATTTGTGGTCCTCTTCATGCTTATGAATGTTGATGGCTGGCACGCATACTTCTGGATTGCATTCGTTCCTTTCTTTCTTCTTCTTGCTGTTGGCGCTAAGCTGCAGCATGTAATCACCCAGTTGGCTCATGAGGTTGCTGAGAAACATATAGCCGTAGAAGGGGAACTAATAGTTCAACCATCAGACGAACACTTTTGGTTTGGCAAGCCCAAATTTGTTCTCTTCTTGATCCATTTCATCCTTTTCCAAAATGCTTTCGAGATGGCATTTTTTTTCTGGATATGGGTTCAATATGGTTTTACCTCTTGCATAATGGGAAAAGTGAAGTACATTATCCCCAGGATTGTTATTGGGTTGTTCATTCAGGTGCTCTGTAGTTACAGTACACTTCCACTTTACGCCATTGTGACACAGATGGGAACCAATTTCAAGAAAGCGATATTTGACGAAGACGTACGCTTGGGACTTGTTGGTTGGGCTAAAAAAGCTAAGAGAAGGAAGGCAAGCATGGATGGCTCCAGCTCTGGCATTGGTTCTGACGTGGGAGTTCAGCTAGGCAAAGTTAACCAAAAGACCACTACGAAGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0016020 GO:0044464 GO:0050896 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mlo

Protein Analysis

489

Amino Acids

55.55

Weight (kDa)

8.93

Isoelectric Point (pI)

21.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015815)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g08130 FvH4_7g08130
malus_domestica MD02G1230200.v1.1 MD07G1082000.v1.1
prunus_persica Prupe.2G107600_v2.0.a1 Prupe.2G107600_v2.0.a1
pyrus_communis pycom07g06530
rosa_chinensis RchiOBHm_Chr1g0341101
rosa_laevigata RLG00000029064
rosa_multiflora Rmu_sc0001211.1_g000067
rosa_rugosa Rorug01G0159900.1
rosa_samantha Rh1AG174200 Rh1BG142500 Rh1CG162000
rosa_wichuraiana Rw1G014530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 474
Acc36I ACCTGC 1 cut(s) 474
Acc65I GGTACC 1 cut(s) 433
AccB1I GGYRCC 1 cut(s) 433
AccII CGCG 1 cut(s) 822
AciI CCGC 1 cut(s) 93
AclWI GGATC 3 cut(s) 242, 730, 1099
AcsI RAATTY 1 cut(s) 1088
AfaI GTAC 6 cut(s) 125, 413, 435, 1205, 1261, 1332
AfiI CCNNNNNNNGG 6 cut(s) 351, 628, 658, 780, 781, 1035
AgsI TTSAA 6 cut(s) 579, 608, 830, 1052, 1166, 1306
AjiI CACGTC 1 cut(s) 1417
AjnI CCWGG 3 cut(s) 371, 627, 1214
AluBI AGCT 5 cut(s) 184, 976, 1364, 1398, 1429
AluI AGCT 5 cut(s) 184, 976, 1364, 1398, 1429
Alw21I GWGCWC 2 cut(s) 517, 1248
Alw26I GTCTC 1 cut(s) 293
AlwI GGATC 3 cut(s) 242, 730, 1099
AoxI GGCC 1 cut(s) 159
ApeKI GCWGC 4 cut(s) 277, 386, 976, 979
ApoI RAATTY 1 cut(s) 1088
AseI ATTAAT 1 cut(s) 588
Asp718I GGTACC 1 cut(s) 433
AspLEI GCGC 2 cut(s) 824, 971
AspS9I GGNCC 3 cut(s) 20, 649, 883
AsuHPI GGTGA 5 cut(s) 229, 407, 610, 739, 982
AvaII GGWCC 3 cut(s) 20, 649, 883
BaeI ACNNNNGTAYC 2 cut(s) 425, 458
BanI GGYRCC 1 cut(s) 433
BanII GRGCYC 1 cut(s) 106
BbsI GAAGAC 1 cut(s) 1332
Bbv12I GWGCWC 2 cut(s) 517, 1248
BbvI GCAGC 4 cut(s) 264, 373, 963, 991
BccI CCATC 6 cut(s) 679, 902, 1063, 1132, 1285, 1382
BceAI ACGGC 1 cut(s) 1013
BcgI CGANNNNNNTGC 4 cut(s) 55, 70, 89, 104
BciT130I CCWGG 3 cut(s) 373, 629, 1216
BclI TGATCA 1 cut(s) 301
BcoDI GTCTC 1 cut(s) 293
BfaI CTAG 3 cut(s) 29, 488, 1430
BfmI CTRYAG 2 cut(s) 977, 1249
BfoI RGCGCY 1 cut(s) 972
BfuAI ACCTGC 1 cut(s) 474
BisI GCNGC 5 cut(s) 93, 278, 387, 977, 980
BlpI GCTNAGC 1 cut(s) 972
BlsI GCNGC 5 cut(s) 94, 279, 388, 978, 981
BmcAI AGTACT 1 cut(s) 125
Bme1390I CCNGG 3 cut(s) 373, 629, 1216
Bme18I GGWCC 3 cut(s) 20, 649, 883
BmgBI CACGTC 1 cut(s) 1417
BmgT120I GGNCC 3 cut(s) 20, 649, 883
BmiI GGNNCC 3 cut(s) 435, 1297, 1393
BmrFI CCNGG 3 cut(s) 373, 629, 1216
BmrI ACTGGG 2 cut(s) 767, 988
BmsI GCATC 1 cut(s) 316
BmuI ACTGGG 2 cut(s) 767, 988
BpiI GAAGAC 1 cut(s) 1332
BpmI CTGGAG 3 cut(s) 27, 411, 1378
Bpu1102I GCTNAGC 1 cut(s) 972
BpuEI CTTGAG 2 cut(s) 148, 152
BsaJI CCNNGG 1 cut(s) 1214
Bsc4I CCNNNNNNNGG 6 cut(s) 351, 628, 658, 780, 781, 1035
Bse1I ACTGG 2 cut(s) 762, 994
Bse3DI GCAATG 2 cut(s) 357, 775
BseBI CCWGG 3 cut(s) 373, 629, 1216
BseDI CCNNGG 1 cut(s) 1214
BseGI GGATG 4 cut(s) 328, 574, 1113, 1393
BseLI CCNNNNNNNGG 6 cut(s) 351, 628, 658, 780, 781, 1035
BseMI GCAATG 2 cut(s) 357, 775
BseMII CTCAG 2 cut(s) 249, 1005
BseNI ACTGG 2 cut(s) 762, 994
BseRI GAGGAG 3 cut(s) 145, 200, 203
BseXI GCAGC 4 cut(s) 264, 373, 963, 991
BseYI CCCAGC 2 cut(s) 193, 362
BsgI GTGCAG 1 cut(s) 452
Bsh1236I CGCG 1 cut(s) 822
BshFI GGCC 1 cut(s) 161
BshNI GGYRCC 1 cut(s) 433
BsiHKAI GWGCWC 2 cut(s) 517, 1248
BsiWI CGTACG 1 cut(s) 1330
BslFI GGGAC 1 cut(s) 1353
BslI CCNNNNNNNGG 6 cut(s) 351, 628, 658, 780, 781, 1035
BsmAI GTCTC 1 cut(s) 293
BsmFI GGGAC 1 cut(s) 1353
BsmI GAATGC 2 cut(s) 455, 935
BsnI GGCC 1 cut(s) 161
Bsp1286I GDGCHC 3 cut(s) 106, 517, 1248
Bsp143I GATC 7 cut(s) 72, 234, 301, 615, 722, 734, 1104
Bsp1720I GCTNAGC 1 cut(s) 972
BspACI CCGC 1 cut(s) 93
BspANI GGCC 1 cut(s) 161
BspCNI CTCAG 2 cut(s) 250, 1006
BspFNI CGCG 1 cut(s) 822
BspHI TCATGA 1 cut(s) 1003
BspLI GGNNCC 3 cut(s) 435, 1297, 1393
BspMAI CTGCAG 1 cut(s) 981
BspMI ACCTGC 1 cut(s) 474
BspPI GGATC 3 cut(s) 242, 730, 1099
BspQI GCTCTTC 1 cut(s) 174
BspT107I GGYRCC 1 cut(s) 433
BsrDI GCAATG 2 cut(s) 357, 775
BsrI ACTGG 2 cut(s) 762, 994
BssECI CCNNGG 1 cut(s) 1214
BssMI GATC 7 cut(s) 72, 234, 301, 615, 722, 734, 1104
Bst2UI CCWGG 3 cut(s) 373, 629, 1216
Bst4CI ACNGT 4 cut(s) 70, 220, 416, 1259
Bst6I CTCTTC 3 cut(s) 174, 893, 1103
BstC8I GCNNGC 5 cut(s) 102, 914, 918, 1082, 1381
BstDEI CTNAG 4 cut(s) 258, 972, 1014, 1365
BstEII GGTNACC 2 cut(s) 727, 785
BstF5I GGATG 4 cut(s) 328, 574, 1113, 1393
BstFNI CGCG 1 cut(s) 822
BstH2I RGCGCY 1 cut(s) 972
BstHHI GCGC 2 cut(s) 824, 971
BstKTI GATC 7 cut(s) 75, 237, 304, 618, 725, 737, 1107
BstMAI GTCTC 1 cut(s) 293
BstMBI GATC 7 cut(s) 72, 234, 301, 615, 722, 734, 1104
BstMWI GCNNNNNNNGC 5 cut(s) 101, 190, 968, 1361, 1389
BstNI CCWGG 3 cut(s) 373, 629, 1216
BstNSI RCATGY 1 cut(s) 986
BstPI GGTNACC 2 cut(s) 727, 785
BstSCI CCNGG 3 cut(s) 371, 627, 1214
BstSFI CTRYAG 2 cut(s) 977, 1249
BstUI CGCG 1 cut(s) 822
BstV1I GCAGC 4 cut(s) 264, 373, 963, 991
BstV2I GAAGAC 1 cut(s) 1332
BsuRI GGCC 1 cut(s) 161
BtrI CACGTC 1 cut(s) 1417
BtsCI GGATG 4 cut(s) 328, 574, 1113, 1393
BtsIMutI CAGTG 2 cut(s) 66, 216
BveI ACCTGC 1 cut(s) 474
Cac8I GCNNGC 5 cut(s) 102, 914, 918, 1082, 1381
CciI TCATGA 1 cut(s) 1003
CfoI GCGC 2 cut(s) 824, 971
Cfr13I GGNCC 3 cut(s) 20, 649, 883
Csp6I GTAC 6 cut(s) 124, 412, 434, 1204, 1260, 1331
CviQI GTAC 6 cut(s) 124, 412, 434, 1204, 1260, 1331
DdeI CTNAG 4 cut(s) 258, 972, 1014, 1365
DpnI GATC 7 cut(s) 74, 236, 303, 617, 724, 736, 1106
DpnII GATC 7 cut(s) 72, 234, 301, 615, 722, 734, 1104
DraI TTTAAA 1 cut(s) 841
Eam1104I CTCTTC 3 cut(s) 174, 893, 1103
EarI CTCTTC 3 cut(s) 174, 893, 1103
Eco147I AGGCCT 1 cut(s) 161
Eco24I GRGCYC 1 cut(s) 106
Eco47I GGWCC 3 cut(s) 20, 649, 883
Eco91I GGTNACC 2 cut(s) 727, 785
EcoO65I GGTNACC 2 cut(s) 727, 785
EcoRII CCWGG 3 cut(s) 371, 627, 1214
EcoT38I GRGCYC 1 cut(s) 106
FalI AAGNNNNNCTT 2 cut(s) 168, 200
FaqI GGGAC 1 cut(s) 1353
FbaI TGATCA 1 cut(s) 301
Fnu4HI GCNGC 5 cut(s) 93, 278, 387, 977, 980
FokI GGATG 4 cut(s) 335, 581, 1100, 1400
FriOI GRGCYC 1 cut(s) 106
Fsp4HI GCNGC 5 cut(s) 93, 278, 387, 977, 980
FspBI CTAG 3 cut(s) 29, 488, 1430
GlaI GCGC 2 cut(s) 823, 970
GluI GCNGC 5 cut(s) 93, 278, 387, 977, 980
GsaI CCCAGC 2 cut(s) 197, 366
GsuI CTGGAG 3 cut(s) 27, 411, 1378
HaeII RGCGCY 1 cut(s) 972
HaeIII GGCC 1 cut(s) 161
HhaI GCGC 2 cut(s) 824, 971
Hin6I GCGC 2 cut(s) 822, 969
HinP1I GCGC 2 cut(s) 822, 969
HincII GTYRAC 1 cut(s) 1441
HindII GTYRAC 1 cut(s) 1441
HinfI GANTC 1 cut(s) 846
HpaI GTTAAC 1 cut(s) 1441
HphI GGTGA 5 cut(s) 229, 407, 610, 739, 982
Hpy166II GTNNAC 3 cut(s) 36, 1262, 1441
Hpy188I TCNGA 5 cut(s) 533, 684, 739, 1060, 1414
Hpy188III TCNNGA 8 cut(s) 29, 114, 928, 1004, 1102, 1135, 1153, 1306
Hpy8I GTNNAC 3 cut(s) 36, 1262, 1441
HpyAV CCTTC 6 cut(s) 11, 517, 1028, 1365, 1369, 1453
HpyCH4III ACNGT 4 cut(s) 70, 220, 416, 1259
HpyCH4IV ACGT 2 cut(s) 1329, 1416
HpyCH4V TGCA 7 cut(s) 66, 285, 469, 780, 935, 979, 1185
HpyF10VI GCNNNNNNNGC 5 cut(s) 101, 190, 968, 1361, 1389
HpyF3I CTNAG 4 cut(s) 258, 972, 1014, 1365
HpySE526I ACGT 2 cut(s) 1329, 1416
HspAI GCGC 2 cut(s) 822, 969
KpnI GGTACC 1 cut(s) 437
Ksp22I TGATCA 1 cut(s) 301
KspAI GTTAAC 1 cut(s) 1441
Kzo9I GATC 7 cut(s) 72, 234, 301, 615, 722, 734, 1104
LguI GCTCTTC 1 cut(s) 174
LmnI GCTCC 2 cut(s) 631, 1397
Lsp1109I GCAGC 4 cut(s) 264, 373, 963, 991
LweI GCATC 1 cut(s) 316
MaeI CTAG 3 cut(s) 29, 488, 1430
MaeII ACGT 2 cut(s) 1329, 1416
MaeIII GTNAC 5 cut(s) 502, 727, 785, 1253, 1282
MalI GATC 7 cut(s) 74, 236, 303, 617, 724, 736, 1106
MboI GATC 7 cut(s) 72, 234, 301, 615, 722, 734, 1104
MboII GAAGA 8 cut(s) 148, 191, 842, 880, 944, 947, 1090, 1337
MhlI GDGCHC 3 cut(s) 106, 517, 1248
MluCI AATT 4 cut(s) 673, 799, 1088, 1300
MlyI GAGTC 1 cut(s) 855
MmeI TCCRAC 2 cut(s) 47, 316
MseI TTAA 6 cut(s) 174, 539, 588, 798, 840, 1440
MslI CAYNNNNRTG 3 cut(s) 812, 896, 1241
MspR9I CCNGG 3 cut(s) 373, 629, 1216
Mva1269I GAATGC 2 cut(s) 455, 935
MvaI CCWGG 3 cut(s) 373, 629, 1216
MvnI CGCG 1 cut(s) 822
MwoI GCNNNNNNNGC 5 cut(s) 101, 190, 968, 1361, 1389
NdeII GATC 7 cut(s) 72, 234, 301, 615, 722, 734, 1104
NlaIV GGNNCC 3 cut(s) 435, 1297, 1393
NmeAIII GCCGAG 1 cut(s) 121
NmuCI GTSAC 3 cut(s) 502, 727, 1282
NspI RCATGY 1 cut(s) 986
PagI TCATGA 1 cut(s) 1003
PaqCI CACCTGC 1 cut(s) 474
PceI AGGCCT 1 cut(s) 161
PciSI GCTCTTC 1 cut(s) 174
PctI GAATGC 2 cut(s) 455, 935
Pfl23II CGTACG 1 cut(s) 1330
PfoI TCCNGGA 1 cut(s) 627
PkrI GCNGC 5 cut(s) 94, 279, 388, 978, 981
PleI GAGTC 1 cut(s) 854
PpsI GAGTC 1 cut(s) 854
PshBI ATTAAT 1 cut(s) 588
Psp6I CCWGG 3 cut(s) 371, 627, 1214
PspEI GGTNACC 2 cut(s) 727, 785
PspFI CCCAGC 2 cut(s) 193, 362
PspGI CCWGG 3 cut(s) 371, 627, 1214
PspLI CGTACG 1 cut(s) 1330
PspN4I GGNNCC 3 cut(s) 435, 1297, 1393
PspPI GGNCC 3 cut(s) 20, 649, 883
PstI CTGCAG 1 cut(s) 981
RsaI GTAC 6 cut(s) 125, 413, 435, 1205, 1261, 1332
RsaNI GTAC 6 cut(s) 124, 412, 434, 1204, 1260, 1331
RseI CAYNNNNRTG 3 cut(s) 812, 896, 1241
SapI GCTCTTC 1 cut(s) 174
SaqAI TTAA 6 cut(s) 174, 539, 588, 798, 840, 1440
SatI GCNGC 5 cut(s) 93, 278, 387, 977, 980
Sau3AI GATC 7 cut(s) 72, 234, 301, 615, 722, 734, 1104
Sau96I GGNCC 3 cut(s) 20, 649, 883
ScaI AGTACT 1 cut(s) 125
SchI GAGTC 1 cut(s) 855
ScrFI CCNGG 3 cut(s) 373, 629, 1216
SduI GDGCHC 3 cut(s) 106, 517, 1248
SfaNI GCATC 1 cut(s) 316
SfcI CTRYAG 2 cut(s) 977, 1249
SinI GGWCC 3 cut(s) 20, 649, 883
SmiMI CAYNNNNRTG 3 cut(s) 812, 896, 1241
SmlI CTYRAG 2 cut(s) 127, 167
SmoI CTYRAG 2 cut(s) 127, 167
Sse9I AATT 4 cut(s) 673, 799, 1088, 1300
SseBI AGGCCT 1 cut(s) 161
SsiI CCGC 1 cut(s) 93
SspMI CTAG 3 cut(s) 29, 488, 1430
StuI AGGCCT 1 cut(s) 161
StyD4I CCNGG 3 cut(s) 371, 627, 1214
TaaI ACNGT 4 cut(s) 70, 220, 416, 1259
TaiI ACGT 2 cut(s) 1332, 1419
TaqI TCGA 1 cut(s) 1134
TasI AATT 4 cut(s) 673, 799, 1088, 1300
TatI WGTACW 3 cut(s) 123, 1203, 1259
TauI GCSGC 1 cut(s) 95
Tru1I TTAA 6 cut(s) 174, 539, 588, 798, 840, 1440
Tru9I TTAA 6 cut(s) 174, 539, 588, 798, 840, 1440
TscAI CASTG 2 cut(s) 73, 223
TseFI GTSAC 3 cut(s) 502, 727, 1282
TseI GCWGC 4 cut(s) 277, 386, 976, 979
Tsp45I GTSAC 3 cut(s) 502, 727, 1282
TspDTI ATGAA 8 cut(s) 190, 585, 615, 754, 880, 914, 1102, 1225
TspRI CASTG 2 cut(s) 73, 223
VpaK11BI GGWCC 3 cut(s) 20, 649, 883
VspI ATTAAT 1 cut(s) 588
XapI RAATTY 1 cut(s) 1088
XbaI TCTAGA 1 cut(s) 28
XceI RCATGY 1 cut(s) 986
XspI CTAG 3 cut(s) 29, 488, 1430
ZrmI AGTACT 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.