Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0014361

Physical Location & Seq

Genomic Coordinates Reverse (-)

10778278 .. 10781268

Gene Structure 2991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1097800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGCTTCCCCACACTTCCGTCCACCACCACCACAACGCCACCCTCTCCTCCTCCCTCTTCTACACCCGCCCCCTCCTATGCAAAATCCCAACTGGGACCCTGCCCGGTTCCATAAATTTTCTAAAACTCCCCACCATCTCCTGCTCCATATCCCAAGTCCACAACTATGGCACCGTGGACTACGAGCGGAGGCCCATGGTCAAATGGAACGCCATTTACCGGAAAATATCGCTCACGGAGGACCCTGAAGTGCGGTCTGCTGACATGTTGAACCAGTGGGAGAAGGAGGGCAGGAAGCTCACCAAGTGGGAGCTTTGTAGAGTGGTCAAGGAATTGCGGAAGTACAAGCGCTATGACAGAGCTCTTGAGGTGTATGATTGGATGAGCAACAGAGGAGAGAGGTTTAGAATATCCACTAGCGATGCTGCAATTCAACTAGATTTATTTGCTAAAGTTCGGGGAGTTGCTAGCGCTGAAAATTACTTCCTGAGCCTGCCAGATACATTAAAGGACAGGAGAATATATGGGGCTCTACTCAATGCCTATGTTCGGGCTAGAATGAAACAGAAGGCAGAAGCATTACTGGAAAAAATGAGAACGAAAGGTCATGCATTGCAATCTCTTCCATTTAATGTGATGATGACACTCTATATGAATCTCAGAGACTATGATAAAGTTGATTCGATTATTTCTGAAATGATAGAGAAAAACATCCAGCTAGATATATACTCCTACAATATCTGGTTATCGTCTCGTGGATCCCAAGGATCTGCAGAACGGATGGAAGAGGTTTTCGAAAAGATGAAAGTGGACAGAACCATTAATCCCAACTGGACCACATTCAGCACAATGGCTACAATGTACATCAAGATGGGGCAGCTTGACAAGGCCGAAGCTTGCCTGAGGAAGGTTGAGAGTAGAATCACAAGTCGGGATTGGATACCTTATCATTATCTTTTAAGTCTTTATGGCAGTGTTGGCAAGAAAGAGGAGGCTTATCGGGTGTGGAATGTATACAAAGCAAGTTTTCCCACTATTCCGAATCTGGGTTACCATGCTATAATATCTTCTCTACTCAGATTAGGTGATGTTGAAGGGTCTGAGAAGCTTTATGAGGAATGGCTGACAGTTAAGTCAACATACGACCCTAGAATTGCAAATCTTTTCATAACGTTTTATATTAAAGAAGGGGATTTTGATTCTGCCCAAAGTTTCTATAACCACATGGTTGATGTAGGAGGAAAACCCAACTCAAGTACGTGGGAGTCCCTCACTGAAGGGCACATGGAAGAGAGGAGAATTTCTGAGGCATTATCCTGCTGGAAAGAAGCTTTTTCTGCTGAGGGATCAAAGAGTTGGAGGCCAAAGCCCGTAAATGTTTCTGCCTTCCTTGAACTTTGTGAGCAAGAAGCTGATTCGGTAAGCAAAGAGGTTTTCATGGGACTTTTGAGCCAGTCAGGACAGCTTAAAAATAAGTTGTATGCATCATTACTTGGCTTAACTGATGATGTTAATGATAAAACTAATGTTAATGGGGATGATGACGATGAGAAAGCGGATGATGGGTCAGAATTTCTTTTGAACCAATTGCAGGACACTACCCCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR TPR_8

Protein Analysis

536

Amino Acids

61.61

Weight (kDa)

6.63

Isoelectric Point (pI)

41.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	210 - 249	6.8e-06	PPR repeat family
PPR_3	PF13812	228 - 288	3.5e-08	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02150
fragaria_vesca	FvH4_7g09350
malus_domestica	MD02G1219200.v1.1 MD07G1097800.v1.1
prunus_persica	Prupe.2G121900_v2.0.a1
pyrus_communis	pycom02g18110 pycom07g08050
rosa_chinensis	RchiOBHm_Chr1g0346001
rosa_laevigata	RLG00000028826
rosa_multiflora	Rmu_sc0008115.1_g000003
rosa_roxburghii	Rroxscaffold_4G00308950
rosa_samantha	Rh1AG196500 Rh1BG162000 Rh1CG181400 Rh1DG192300
rosa_wichuraiana	Rw1G016400 Rw1G016520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1132
AccB1I	GGYRCC	1 cut(s)	170
AccBSI	CCGCTC	1 cut(s)	187
AccI	GTMKAC	1 cut(s)	1014
AciI	CCGC	5 cut(s)	67, 187, 253, 337, 1556
AclI	AACGTT	1 cut(s)	1172
AclWI	GGATC	4 cut(s)	753, 766, 775, 1354
AcsI	RAATTY	3 cut(s)	115, 1299, 1571
AcuI	CTGAAG	2 cut(s)	267, 1296
AdeI	CACNNNGTG	1 cut(s)	306
AfaI	GTAC	3 cut(s)	344, 863, 1258
AfeI	AGCGCT	2 cut(s)	350, 472
AfiI	CCNNNNNNNGG	5 cut(s)	219, 549, 907, 1046, 1591
AflIII	ACRYGT	1 cut(s)	264
AgsI	TTSAA	5 cut(s)	271, 434, 1094, 1394, 1582
AloI	GAACNNNNNNTCC	2 cut(s)	808, 840
Alw21I	GWGCWC	1 cut(s)	364
Alw26I	GTCTC	2 cut(s)	657, 756
AlwI	GGATC	4 cut(s)	753, 766, 775, 1354
Aor51HI	AGCGCT	2 cut(s)	350, 472
AoxI	GGCC	3 cut(s)	191, 888, 1361
ApeKI	GCWGC	2 cut(s)	425, 877
ApoI	RAATTY	3 cut(s)	115, 1299, 1571
AseI	ATTAAT	1 cut(s)	822
AspLEI	GCGC	2 cut(s)	351, 473
AspS9I	GGNCC	4 cut(s)	96, 192, 241, 834
AsuC2I	CCSGG	1 cut(s)	105
AsuHPI	GGTGA	2 cut(s)	292, 1097
AsuII	TTCGAA	1 cut(s)	795
AsuNHI	GCTAGC	1 cut(s)	467
AvaII	GGWCC	3 cut(s)	96, 241, 834
AxyI	CCTNAGG	1 cut(s)	902
BaeGI	GKGCMC	1 cut(s)	1284
BamHI	GGATCC	1 cut(s)	758
BanI	GGYRCC	1 cut(s)	170
BanII	GRGCYC	2 cut(s)	364, 532
BauI	CACGAG	1 cut(s)	753
Bbv12I	GWGCWC	1 cut(s)	364
BbvCI	CCTCAGC	1 cut(s)	1341
BbvI	GCAGC	2 cut(s)	412, 889
BccI	CCATC	4 cut(s)	143, 775, 865, 1556
BciVI	GTATCC	1 cut(s)	933
BcnI	CCSGG	1 cut(s)	105
BcoDI	GTCTC	2 cut(s)	657, 756
BfaI	CTAG	6 cut(s)	417, 437, 468, 555, 719, 1149
BfmI	CTRYAG	1 cut(s)	771
BfoI	RGCGCY	2 cut(s)	352, 474
BfuI	GTATCC	1 cut(s)	933
BisI	GCNGC	2 cut(s)	426, 878
BlsI	GCNGC	2 cut(s)	427, 879
Bme1390I	CCNGG	1 cut(s)	105
Bme18I	GGWCC	3 cut(s)	96, 241, 834
BmgT120I	GGNCC	4 cut(s)	96, 192, 241, 834
BmiI	GGNNCC	6 cut(s)	97, 98, 109, 172, 243, 760
BmrFI	CCNGG	1 cut(s)	105
BmrI	ACTGGG	1 cut(s)	102
BmsI	GCATC	2 cut(s)	412, 1493
BmtI	GCTAGC	1 cut(s)	471
BmuI	ACTGGG	1 cut(s)	102
Bpu10I	CCTNAGC	2 cut(s)	488, 1341
Bpu14I	TTCGAA	1 cut(s)	795
BpuEI	CTTGAG	2 cut(s)	386, 1237
BpuMI	CCSGG	1 cut(s)	105
BsaAI	YACGTR	1 cut(s)	1260
BsaJI	CCNNGG	3 cut(s)	174, 195, 763
BsaWI	WCCGGW	1 cut(s)	219
Bsc4I	CCNNNNNNNGG	5 cut(s)	219, 549, 907, 1046, 1591
Bse1I	ACTGG	5 cut(s)	97, 274, 588, 836, 1453
Bse21I	CCTNAGG	1 cut(s)	902
Bse3DI	GCAATG	1 cut(s)	611
BseDI	CCNNGG	3 cut(s)	174, 195, 763
BseGI	GGATG	5 cut(s)	387, 711, 786, 1543, 1564
BseLI	CCNNNNNNNGG	5 cut(s)	219, 549, 907, 1046, 1591
BseMI	GCAATG	1 cut(s)	611
BseMII	CTCAG	7 cut(s)	479, 673, 893, 1090, 1092, 1296, 1332
BseNI	ACTGG	5 cut(s)	97, 274, 588, 836, 1453
BseRI	GAGGAG	5 cut(s)	37, 40, 408, 1004, 1309
BseSI	GKGCMC	1 cut(s)	1284
BseXI	GCAGC	2 cut(s)	412, 889
BshFI	GGCC	3 cut(s)	193, 890, 1363
BshNI	GGYRCC	1 cut(s)	170
BsiHKAI	GWGCWC	1 cut(s)	364
BsiSI	CCGG	2 cut(s)	105, 220
BslFI	GGGAC	3 cut(s)	109, 1252, 1455
BslI	CCNNNNNNNGG	5 cut(s)	219, 549, 907, 1046, 1591
BsmAI	GTCTC	2 cut(s)	657, 756
BsmBI	CGTCTC	1 cut(s)	756
BsmFI	GGGAC	3 cut(s)	109, 1252, 1455
BsnI	GGCC	3 cut(s)	193, 890, 1363
Bsp119I	TTCGAA	1 cut(s)	795
Bsp1286I	GDGCHC	3 cut(s)	364, 532, 1284
Bsp1407I	TGTACA	1 cut(s)	861
Bsp143I	GATC	3 cut(s)	758, 767, 1346
Bsp19I	CCATGG	1 cut(s)	195
BspACI	CCGC	5 cut(s)	67, 187, 253, 337, 1556
BspANI	GGCC	3 cut(s)	193, 890, 1363
BspCNI	CTCAG	7 cut(s)	480, 672, 894, 1089, 1093, 1297, 1333
BspLI	GGNNCC	6 cut(s)	97, 98, 109, 172, 243, 760
BspMAI	CTGCAG	1 cut(s)	775
BspOI	GCTAGC	1 cut(s)	471
BspPI	GGATC	4 cut(s)	753, 766, 775, 1354
BspT104I	TTCGAA	1 cut(s)	795
BspT107I	GGYRCC	1 cut(s)	170
BsrBI	CCGCTC	1 cut(s)	187
BsrDI	GCAATG	1 cut(s)	611
BsrGI	TGTACA	1 cut(s)	861
BsrI	ACTGG	5 cut(s)	97, 274, 588, 836, 1453
BssECI	CCNNGG	3 cut(s)	174, 195, 763
BssMI	GATC	3 cut(s)	758, 767, 1346
BssNAI	GTATAC	1 cut(s)	1015
BssSI	CACGAG	1 cut(s)	753
BssT1I	CCWWGG	2 cut(s)	195, 763
Bst1107I	GTATAC	1 cut(s)	1015
Bst2BI	CACGAG	1 cut(s)	753
Bst4CI	ACNGT	2 cut(s)	175, 1129
Bst6I	CTCTTC	4 cut(s)	62, 627, 780, 1284
BstAUI	TGTACA	1 cut(s)	861
BstBAI	YACGTR	1 cut(s)	1260
BstBI	TTCGAA	1 cut(s)	795
BstC8I	GCNNGC	3 cut(s)	469, 494, 898
BstDEI	CTNAG	7 cut(s)	488, 659, 902, 1076, 1101, 1305, 1341
BstDSI	CCRYGG	2 cut(s)	174, 195
BstEII	GGTNACC	1 cut(s)	1049
BstENI	CCTNNNNNAGG	1 cut(s)	905
BstF5I	GGATG	5 cut(s)	387, 711, 786, 1543, 1564
BstH2I	RGCGCY	2 cut(s)	352, 474
BstHHI	GCGC	2 cut(s)	351, 473
BstKTI	GATC	3 cut(s)	761, 770, 1349
BstMAI	GTCTC	2 cut(s)	657, 756
BstMBI	GATC	3 cut(s)	758, 767, 1346
BstMWI	GCNNNNNNNGC	2 cut(s)	978, 1337
BstNSI	RCATGY	1 cut(s)	268
BstPI	GGTNACC	1 cut(s)	1049
BstSCI	CCNGG	1 cut(s)	103
BstSFI	CTRYAG	1 cut(s)	771
BstSLI	GKGCMC	1 cut(s)	1284
BstV1I	GCAGC	2 cut(s)	412, 889
BstX2I	RGATCY	2 cut(s)	758, 767
BstXI	CCANNNNNNTGG	1 cut(s)	167
BstYI	RGATCY	2 cut(s)	758, 767
BstZ17I	GTATAC	1 cut(s)	1015
Bsu36I	CCTNAGG	1 cut(s)	902
BsuI	GTATCC	1 cut(s)	933
BsuRI	GGCC	3 cut(s)	193, 890, 1363
BtgI	CCRYGG	2 cut(s)	174, 195
BtgZI	GCGATG	1 cut(s)	435
BtsCI	GGATG	5 cut(s)	387, 711, 786, 1543, 1564
BtsI	GCAGTG	1 cut(s)	979
BtsIMutI	CAGTG	3 cut(s)	281, 979, 1272
Cac8I	GCNNGC	3 cut(s)	469, 494, 898
CfoI	GCGC	2 cut(s)	351, 473
Cfr13I	GGNCC	4 cut(s)	96, 192, 241, 834
Csp6I	GTAC	3 cut(s)	343, 862, 1257
CviAII	CATG	7 cut(s)	196, 265, 608, 1055, 1225, 1285, 1438
CviQI	GTAC	3 cut(s)	343, 862, 1257
DdeI	CTNAG	7 cut(s)	488, 659, 902, 1076, 1101, 1305, 1341
DpnI	GATC	3 cut(s)	760, 769, 1348
DpnII	GATC	3 cut(s)	758, 767, 1346
DraIII	CACNNNGTG	1 cut(s)	306
DrdI	GACNNNNNNGTC	1 cut(s)	1132
DseDI	GACNNNNNNGTC	1 cut(s)	1132
Eam1104I	CTCTTC	4 cut(s)	62, 627, 780, 1284
EarI	CTCTTC	4 cut(s)	62, 627, 780, 1284
Ecl136II	GAGCTC	1 cut(s)	362
Eco130I	CCWWGG	2 cut(s)	195, 763
Eco24I	GRGCYC	2 cut(s)	364, 532
Eco47I	GGWCC	3 cut(s)	96, 241, 834
Eco47III	AGCGCT	2 cut(s)	350, 472
Eco53kI	GAGCTC	1 cut(s)	362
Eco57I	CTGAAG	2 cut(s)	267, 1296
Eco81I	CCTNAGG	1 cut(s)	902
Eco91I	GGTNACC	1 cut(s)	1049
EcoICRI	GAGCTC	1 cut(s)	362
EcoNI	CCTNNNNNAGG	1 cut(s)	905
EcoO109I	RGGNCCY	2 cut(s)	96, 241
EcoO65I	GGTNACC	1 cut(s)	1049
EcoT14I	CCWWGG	2 cut(s)	195, 763
EcoT22I	ATGCAT	2 cut(s)	613, 1486
EcoT38I	GRGCYC	2 cut(s)	364, 532
ErhI	CCWWGG	2 cut(s)	195, 763
Esp3I	CGTCTC	1 cut(s)	756
FaeI	CATG	7 cut(s)	199, 268, 611, 1058, 1228, 1288, 1441
FaqI	GGGAC	3 cut(s)	109, 1252, 1455
FatI	CATG	7 cut(s)	195, 264, 607, 1054, 1224, 1284, 1437
FauI	CCCGC	1 cut(s)	74
FblI	GTMKAC	1 cut(s)	1014
Fnu4HI	GCNGC	2 cut(s)	426, 878
FokI	GGATG	5 cut(s)	394, 698, 793, 1550, 1571
FriOI	GRGCYC	2 cut(s)	364, 532
Fsp4HI	GCNGC	2 cut(s)	426, 878
FspBI	CTAG	6 cut(s)	417, 437, 468, 555, 719, 1149
GlaI	GCGC	2 cut(s)	350, 472
GluI	GCNGC	2 cut(s)	426, 878
HaeII	RGCGCY	2 cut(s)	352, 474
HaeIII	GGCC	3 cut(s)	193, 890, 1363
HapII	CCGG	2 cut(s)	105, 220
HhaI	GCGC	2 cut(s)	351, 473
Hin1II	CATG	7 cut(s)	199, 268, 611, 1058, 1228, 1288, 1441
Hin6I	GCGC	2 cut(s)	349, 471
HinP1I	GCGC	2 cut(s)	349, 471
HincII	GTYRAC	1 cut(s)	1137
HindII	GTYRAC	1 cut(s)	1137
HindIII	AAGCTT	3 cut(s)	894, 1106, 1329
HinfI	GANTC	7 cut(s)	655, 680, 921, 1042, 1199, 1265, 1415
HpaII	CCGG	2 cut(s)	105, 220
HphI	GGTGA	2 cut(s)	292, 1097
Hpy166II	GTNNAC	6 cut(s)	22, 160, 178, 811, 1015, 1137
Hpy188I	TCNGA	7 cut(s)	662, 694, 1041, 1079, 1102, 1306, 1570
Hpy188III	TCNNGA	5 cut(s)	365, 487, 868, 932, 1458
Hpy8I	GTNNAC	6 cut(s)	22, 160, 178, 811, 1015, 1137
HpyAV	CCTTC	7 cut(s)	277, 562, 901, 1088, 1181, 1271, 1396
HpyCH4III	ACNGT	2 cut(s)	175, 1129
HpyCH4IV	ACGT	2 cut(s)	1172, 1259
HpyCH4V	TGCA	8 cut(s)	81, 428, 611, 616, 773, 1157, 1484, 1591
HpyF10VI	GCNNNNNNNGC	2 cut(s)	978, 1337
HpyF3I	CTNAG	7 cut(s)	488, 659, 902, 1076, 1101, 1305, 1341
HpySE526I	ACGT	2 cut(s)	1172, 1259
Hsp92II	CATG	7 cut(s)	199, 268, 611, 1058, 1228, 1288, 1441
HspAI	GCGC	2 cut(s)	349, 471
KflI	GGGWCCC	1 cut(s)	96
Kzo9I	GATC	3 cut(s)	758, 767, 1346
LmnI	GCTCC	2 cut(s)	149, 310
Lsp1109I	GCAGC	2 cut(s)	412, 889
LweI	GCATC	2 cut(s)	412, 1493
MaeI	CTAG	6 cut(s)	417, 437, 468, 555, 719, 1149
MaeII	ACGT	2 cut(s)	1172, 1259
MaeIII	GTNAC	1 cut(s)	1049
MalI	GATC	3 cut(s)	760, 769, 1348
MbiI	CCGCTC	1 cut(s)	187
MboI	GATC	3 cut(s)	758, 767, 1346
MboII	GAAGA	5 cut(s)	49, 614, 797, 1059, 1301
MfeI	CAATTG	1 cut(s)	1586
MflI	RGATCY	2 cut(s)	758, 767
MhlI	GDGCHC	3 cut(s)	364, 532, 1284
MluCI	AATT	8 cut(s)	115, 332, 429, 478, 1152, 1299, 1571, 1586
MlyI	GAGTC	1 cut(s)	1274
MmeI	TCCRAC	1 cut(s)	1337
Mph1103I	ATGCAT	2 cut(s)	613, 1486
MslI	CAYNNNNRTG	2 cut(s)	165, 869
MspI	CCGG	2 cut(s)	105, 220
MspR9I	CCNGG	1 cut(s)	105
MunI	CAATTG	1 cut(s)	1586
MwoI	GCNNNNNNNGC	2 cut(s)	978, 1337
NciI	CCSGG	1 cut(s)	105
NcoI	CCATGG	1 cut(s)	195
NdeII	GATC	3 cut(s)	758, 767, 1346
NheI	GCTAGC	1 cut(s)	467
NlaIII	CATG	7 cut(s)	199, 268, 611, 1058, 1228, 1288, 1441
NlaIV	GGNNCC	6 cut(s)	97, 98, 109, 172, 243, 760
NsiI	ATGCAT	2 cut(s)	613, 1486
NspI	RCATGY	1 cut(s)	268
NspV	TTCGAA	1 cut(s)	795
PciI	ACATGT	1 cut(s)	264
PfeI	GAWTC	6 cut(s)	655, 680, 921, 1042, 1199, 1415
PkrI	GCNGC	2 cut(s)	427, 879
PleI	GAGTC	1 cut(s)	1273
PpsI	GAGTC	1 cut(s)	1273
Ppu21I	YACGTR	1 cut(s)	1260
PpuMI	RGGWCCY	2 cut(s)	96, 241
PscI	ACATGT	1 cut(s)	264
PshBI	ATTAAT	1 cut(s)	822
Psp124BI	GAGCTC	1 cut(s)	364
Psp1406I	AACGTT	1 cut(s)	1172
Psp5II	RGGWCCY	2 cut(s)	96, 241
PspEI	GGTNACC	1 cut(s)	1049
PspN4I	GGNNCC	6 cut(s)	97, 98, 109, 172, 243, 760
PspPI	GGNCC	4 cut(s)	96, 192, 241, 834
PspPPI	RGGWCCY	2 cut(s)	96, 241
PsrI	GAACNNNNNNTAC	2 cut(s)	200, 232
PstI	CTGCAG	1 cut(s)	775
PsuI	RGATCY	2 cut(s)	758, 767
RsaI	GTAC	3 cut(s)	344, 863, 1258
RsaNI	GTAC	3 cut(s)	343, 862, 1257
RseI	CAYNNNNRTG	2 cut(s)	165, 869
SacI	GAGCTC	1 cut(s)	364
SatI	GCNGC	2 cut(s)	426, 878
Sau3AI	GATC	3 cut(s)	758, 767, 1346
Sau96I	GGNCC	4 cut(s)	96, 192, 241, 834
SchI	GAGTC	1 cut(s)	1274
ScrFI	CCNGG	1 cut(s)	105
SduI	GDGCHC	3 cut(s)	364, 532, 1284
SfaNI	GCATC	2 cut(s)	412, 1493
SfcI	CTRYAG	1 cut(s)	771
SfuI	TTCGAA	1 cut(s)	795
SinI	GGWCC	3 cut(s)	96, 241, 834
SmiMI	CAYNNNNRTG	2 cut(s)	165, 869
SmlI	CTYRAG	2 cut(s)	365, 1252
SmoI	CTYRAG	2 cut(s)	365, 1252
Sse9I	AATT	8 cut(s)	115, 332, 429, 478, 1152, 1299, 1571, 1586
SsiI	CCGC	5 cut(s)	67, 187, 253, 337, 1556
SspMI	CTAG	6 cut(s)	417, 437, 468, 555, 719, 1149
SstI	GAGCTC	1 cut(s)	364
StyD4I	CCNGG	1 cut(s)	103
StyI	CCWWGG	2 cut(s)	195, 763
TaaI	ACNGT	2 cut(s)	175, 1129
TaiI	ACGT	2 cut(s)	1175, 1262
TaqI	TCGA	2 cut(s)	683, 795
TasI	AATT	8 cut(s)	115, 332, 429, 478, 1152, 1299, 1571, 1586
TatI	WGTACW	2 cut(s)	342, 861
TfiI	GAWTC	6 cut(s)	655, 680, 921, 1042, 1199, 1415
TscAI	CASTG	3 cut(s)	281, 979, 1279
TseI	GCWGC	2 cut(s)	425, 877
TspDTI	ATGAA	5 cut(s)	575, 668, 818, 1156, 1426
TspGWI	ACGGA	3 cut(s)	7, 251, 793
TspRI	CASTG	3 cut(s)	281, 979, 1279
VpaK11BI	GGWCC	3 cut(s)	96, 241, 834
VspI	ATTAAT	1 cut(s)	822
XagI	CCTNNNNNAGG	1 cut(s)	905
XapI	RAATTY	3 cut(s)	115, 1299, 1571
XceI	RCATGY	1 cut(s)	268
XmiI	GTMKAC	1 cut(s)	1014
XspI	CTAG	6 cut(s)	417, 437, 468, 555, 719, 1149
Zsp2I	ATGCAT	2 cut(s)	613, 1486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.