Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02150 |
| fragaria_vesca | FvH4_7g09350 |
| malus_domestica | MD02G1219200.v1.1 MD07G1097800.v1.1 |
| prunus_persica | Prupe.2G121900_v2.0.a1 |
| pyrus_communis | pycom02g18110 pycom07g08050 |
| rosa_chinensis | RchiOBHm_Chr1g0346001 |
| rosa_laevigata | RLG00000028826 |
| rosa_multiflora | Rmu_sc0008115.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00308950 |
| rosa_samantha | Rh1AG196500 Rh1BG162000 Rh1CG181400 Rh1DG192300 |
| rosa_wichuraiana | Rw1G016400 Rw1G016520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 170 |
| AccBSI | CCGCTC | 1 cut(s) | 187 |
| AccI | GTMKAC | 1 cut(s) | 1014 |
| AciI | CCGC | 7 cut(s) | 67, 132, 187, 253, 337, 1127, 1360 |
| AclWI | GGATC | 5 cut(s) | 753, 766, 775, 942, 1354 |
| AcoI | YGGCCR | 1 cut(s) | 1361 |
| AcsI | RAATTY | 4 cut(s) | 115, 1042, 1299, 1568 |
| AcuI | CTGAAG | 1 cut(s) | 1296 |
| AdeI | CACNNNGTG | 1 cut(s) | 306 |
| AfaI | GTAC | 3 cut(s) | 344, 863, 1258 |
| AfeI | AGCGCT | 2 cut(s) | 350, 472 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 219, 252, 549, 907, 1046, 1588 |
| AflIII | ACRYGT | 1 cut(s) | 264 |
| AgsI | TTSAA | 5 cut(s) | 271, 434, 797, 1094, 1579 |
| AjiI | CACGTC | 1 cut(s) | 265 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 808, 840 |
| AluBI | AGCT | 9 cut(s) | 298, 313, 362, 718, 880, 896, 1108, 1331, 1465 |
| AluI | AGCT | 9 cut(s) | 298, 313, 362, 718, 880, 896, 1108, 1331, 1465 |
| Alw21I | GWGCWC | 1 cut(s) | 364 |
| Alw26I | GTCTC | 1 cut(s) | 756 |
| AlwI | GGATC | 5 cut(s) | 753, 766, 775, 942, 1354 |
| Ama87I | CYCGRG | 1 cut(s) | 1252 |
| Aor51HI | AGCGCT | 2 cut(s) | 350, 472 |
| AoxI | GGCC | 2 cut(s) | 191, 1361 |
| ApeKI | GCWGC | 1 cut(s) | 425 |
| ApoI | RAATTY | 4 cut(s) | 115, 1042, 1299, 1568 |
| AseI | ATTAAT | 1 cut(s) | 822 |
| AspLEI | GCGC | 2 cut(s) | 351, 473 |
| AspS9I | GGNCC | 4 cut(s) | 96, 192, 241, 834 |
| AsuC2I | CCSGG | 1 cut(s) | 105 |
| AsuHPI | GGTGA | 2 cut(s) | 292, 1097 |
| AsuNHI | GCTAGC | 1 cut(s) | 467 |
| AvaI | CYCGRG | 1 cut(s) | 1252 |
| AvaII | GGWCC | 3 cut(s) | 96, 241, 834 |
| AxyI | CCTNAGG | 1 cut(s) | 902 |
| BamHI | GGATCC | 1 cut(s) | 758 |
| BanI | GGYRCC | 1 cut(s) | 170 |
| BanII | GRGCYC | 2 cut(s) | 364, 532 |
| BauI | CACGAG | 1 cut(s) | 753 |
| BbsI | GAAGAC | 1 cut(s) | 1059 |
| Bbv12I | GWGCWC | 1 cut(s) | 364 |
| BbvI | GCAGC | 1 cut(s) | 412 |
| BccI | CCATC | 6 cut(s) | 47, 143, 775, 865, 1337, 1432 |
| BceAI | ACGGC | 1 cut(s) | 985 |
| BciVI | GTATCC | 1 cut(s) | 933 |
| BcnI | CCSGG | 1 cut(s) | 105 |
| BcoDI | GTCTC | 1 cut(s) | 756 |
| BfaI | CTAG | 5 cut(s) | 417, 437, 468, 719, 1149 |
| BfmI | CTRYAG | 1 cut(s) | 771 |
| BfoI | RGCGCY | 2 cut(s) | 352, 474 |
| BfuI | GTATCC | 1 cut(s) | 933 |
| BisI | GCNGC | 2 cut(s) | 426, 1361 |
| BlsI | GCNGC | 2 cut(s) | 427, 1362 |
| Bme1390I | CCNGG | 1 cut(s) | 105 |
| Bme18I | GGWCC | 3 cut(s) | 96, 241, 834 |
| BmeT110I | CYCGRG | 1 cut(s) | 1252 |
| BmgBI | CACGTC | 1 cut(s) | 265 |
| BmgT120I | GGNCC | 4 cut(s) | 96, 192, 241, 834 |
| BmiI | GGNNCC | 5 cut(s) | 98, 109, 172, 243, 760 |
| BmrFI | CCNGG | 1 cut(s) | 105 |
| BmrI | ACTGGG | 1 cut(s) | 1026 |
| BmsI | GCATC | 2 cut(s) | 412, 1493 |
| BmtI | GCTAGC | 1 cut(s) | 471 |
| BmuI | ACTGGG | 1 cut(s) | 1026 |
| BpiI | GAAGAC | 1 cut(s) | 1059 |
| Bpu10I | CCTNAGC | 1 cut(s) | 488 |
| BpuEI | CTTGAG | 1 cut(s) | 386 |
| BpuMI | CCSGG | 1 cut(s) | 105 |
| BsaBI | GATNNNNATC | 1 cut(s) | 933 |
| BsaJI | CCNNGG | 3 cut(s) | 174, 195, 763 |
| BsaWI | WCCGGW | 1 cut(s) | 219 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 219, 252, 549, 907, 1046, 1588 |
| Bse118I | RCCGGY | 1 cut(s) | 1369 |
| Bse1I | ACTGG | 4 cut(s) | 274, 588, 836, 1032 |
| Bse21I | CCTNAGG | 1 cut(s) | 902 |
| Bse3DI | GCAATG | 1 cut(s) | 611 |
| Bse8I | GATNNNNATC | 1 cut(s) | 933 |
| BseDI | CCNNGG | 3 cut(s) | 174, 195, 763 |
| BseGI | GGATG | 5 cut(s) | 39, 387, 711, 786, 1543 |
| BseJI | GATNNNNATC | 1 cut(s) | 933 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 219, 252, 549, 907, 1046, 1588 |
| BseMI | GCAATG | 1 cut(s) | 611 |
| BseMII | CTCAG | 5 cut(s) | 479, 893, 1090, 1092, 1296 |
| BseNI | ACTGG | 4 cut(s) | 274, 588, 836, 1032 |
| BseRI | GAGGAG | 4 cut(s) | 37, 40, 408, 1004 |
| BseXI | GCAGC | 1 cut(s) | 412 |
| BshFI | GGCC | 2 cut(s) | 193, 1363 |
| BshNI | GGYRCC | 1 cut(s) | 170 |
| BsiHKAI | GWGCWC | 1 cut(s) | 364 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1252 |
| BsiSI | CCGG | 3 cut(s) | 105, 220, 1370 |
| BslFI | GGGAC | 2 cut(s) | 1252, 1455 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 219, 252, 549, 907, 1046, 1588 |
| BsmAI | GTCTC | 1 cut(s) | 756 |
| BsmBI | CGTCTC | 1 cut(s) | 756 |
| BsmFI | GGGAC | 2 cut(s) | 1252, 1455 |
| BsnI | GGCC | 2 cut(s) | 193, 1363 |
| BsoBI | CYCGRG | 1 cut(s) | 1252 |
| Bsp1286I | GDGCHC | 2 cut(s) | 364, 532 |
| Bsp1407I | TGTACA | 1 cut(s) | 861 |
| Bsp143I | GATC | 5 cut(s) | 758, 767, 928, 934, 1346 |
| Bsp19I | CCATGG | 1 cut(s) | 195 |
| BspACI | CCGC | 7 cut(s) | 67, 132, 187, 253, 337, 1127, 1360 |
| BspANI | GGCC | 2 cut(s) | 193, 1363 |
| BspCNI | CTCAG | 5 cut(s) | 480, 894, 1089, 1093, 1297 |
| BspLI | GGNNCC | 5 cut(s) | 98, 109, 172, 243, 760 |
| BspMAI | CTGCAG | 1 cut(s) | 775 |
| BspOI | GCTAGC | 1 cut(s) | 471 |
| BspPI | GGATC | 5 cut(s) | 753, 766, 775, 942, 1354 |
| BspT107I | GGYRCC | 1 cut(s) | 170 |
| BsrBI | CCGCTC | 1 cut(s) | 187 |
| BsrDI | GCAATG | 1 cut(s) | 611 |
| BsrFI | RCCGGY | 1 cut(s) | 1369 |
| BsrGI | TGTACA | 1 cut(s) | 861 |
| BsrI | ACTGG | 4 cut(s) | 274, 588, 836, 1032 |
| BssAI | RCCGGY | 1 cut(s) | 1369 |
| BssECI | CCNNGG | 3 cut(s) | 174, 195, 763 |
| BssMI | GATC | 5 cut(s) | 758, 767, 928, 934, 1346 |
| BssNAI | GTATAC | 1 cut(s) | 1015 |
| BssSI | CACGAG | 1 cut(s) | 753 |
| BssT1I | CCWWGG | 2 cut(s) | 195, 763 |
| Bst1107I | GTATAC | 1 cut(s) | 1015 |
| Bst2BI | CACGAG | 1 cut(s) | 753 |
| Bst4CI | ACNGT | 1 cut(s) | 175 |
| Bst6I | CTCTTC | 4 cut(s) | 627, 780, 1284, 1289 |
| BstAUI | TGTACA | 1 cut(s) | 861 |
| BstC8I | GCNNGC | 4 cut(s) | 469, 494, 898, 1125 |
| BstDEI | CTNAG | 5 cut(s) | 488, 902, 1076, 1101, 1305 |
| BstDSI | CCRYGG | 2 cut(s) | 174, 195 |
| BstEII | GGTNACC | 1 cut(s) | 1049 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 905 |
| BstF5I | GGATG | 5 cut(s) | 39, 387, 711, 786, 1543 |
| BstH2I | RGCGCY | 2 cut(s) | 352, 474 |
| BstHHI | GCGC | 2 cut(s) | 351, 473 |
| BstKTI | GATC | 5 cut(s) | 761, 770, 931, 937, 1349 |
| BstMAI | GTCTC | 1 cut(s) | 756 |
| BstMBI | GATC | 5 cut(s) | 758, 767, 928, 934, 1346 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 978, 1337, 1366 |
| BstPI | GGTNACC | 1 cut(s) | 1049 |
| BstSCI | CCNGG | 1 cut(s) | 103 |
| BstSFI | CTRYAG | 1 cut(s) | 771 |
| BstV1I | GCAGC | 1 cut(s) | 412 |
| BstV2I | GAAGAC | 1 cut(s) | 1059 |
| BstX2I | RGATCY | 2 cut(s) | 758, 767 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 167 |
| BstYI | RGATCY | 2 cut(s) | 758, 767 |
| BstZ17I | GTATAC | 1 cut(s) | 1015 |
| Bsu36I | CCTNAGG | 1 cut(s) | 902 |
| BsuI | GTATCC | 1 cut(s) | 933 |
| BsuRI | GGCC | 2 cut(s) | 193, 1363 |
| BtgI | CCRYGG | 2 cut(s) | 174, 195 |
| BtgZI | GCGATG | 1 cut(s) | 435 |
| BtrI | CACGTC | 1 cut(s) | 265 |
| BtsCI | GGATG | 5 cut(s) | 39, 387, 711, 786, 1543 |
| BtsI | GCAGTG | 1 cut(s) | 979 |
| BtsIMutI | CAGTG | 2 cut(s) | 281, 979 |
| Cac8I | GCNNGC | 4 cut(s) | 469, 494, 898, 1125 |
| CfoI | GCGC | 2 cut(s) | 351, 473 |
| Cfr10I | RCCGGY | 1 cut(s) | 1369 |
| Cfr13I | GGNCC | 4 cut(s) | 96, 192, 241, 834 |
| Csp6I | GTAC | 3 cut(s) | 343, 862, 1257 |
| CviAII | CATG | 6 cut(s) | 78, 196, 608, 1055, 1225, 1260 |
| CviQI | GTAC | 3 cut(s) | 343, 862, 1257 |
| DdeI | CTNAG | 5 cut(s) | 488, 902, 1076, 1101, 1305 |
| DpnI | GATC | 5 cut(s) | 760, 769, 930, 936, 1348 |
| DpnII | GATC | 5 cut(s) | 758, 767, 928, 934, 1346 |
| DraIII | CACNNNGTG | 1 cut(s) | 306 |
| EaeI | YGGCCR | 1 cut(s) | 1361 |
| Eam1104I | CTCTTC | 4 cut(s) | 627, 780, 1284, 1289 |
| EarI | CTCTTC | 4 cut(s) | 627, 780, 1284, 1289 |
| Ecl136II | GAGCTC | 1 cut(s) | 362 |
| Eco130I | CCWWGG | 2 cut(s) | 195, 763 |
| Eco24I | GRGCYC | 2 cut(s) | 364, 532 |
| Eco47I | GGWCC | 3 cut(s) | 96, 241, 834 |
| Eco47III | AGCGCT | 2 cut(s) | 350, 472 |
| Eco53kI | GAGCTC | 1 cut(s) | 362 |
| Eco57I | CTGAAG | 1 cut(s) | 1296 |
| Eco81I | CCTNAGG | 1 cut(s) | 902 |
| Eco88I | CYCGRG | 1 cut(s) | 1252 |
| Eco91I | GGTNACC | 1 cut(s) | 1049 |
| EcoICRI | GAGCTC | 1 cut(s) | 362 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 905 |
| EcoO109I | RGGNCCY | 1 cut(s) | 241 |
| EcoO65I | GGTNACC | 1 cut(s) | 1049 |
| EcoT14I | CCWWGG | 2 cut(s) | 195, 763 |
| EcoT22I | ATGCAT | 2 cut(s) | 613, 1486 |
| EcoT38I | GRGCYC | 2 cut(s) | 364, 532 |
| ErhI | CCWWGG | 2 cut(s) | 195, 763 |
| Esp3I | CGTCTC | 1 cut(s) | 756 |
| FaeI | CATG | 6 cut(s) | 81, 199, 611, 1058, 1228, 1263 |
| FaqI | GGGAC | 2 cut(s) | 1252, 1455 |
| FatI | CATG | 6 cut(s) | 77, 195, 607, 1054, 1224, 1259 |
| FauI | CCCGC | 2 cut(s) | 74, 139 |
| FauNDI | CATATG | 1 cut(s) | 1284 |
| FblI | GTMKAC | 1 cut(s) | 1014 |
| Fnu4HI | GCNGC | 2 cut(s) | 426, 1361 |
| FokI | GGATG | 5 cut(s) | 26, 394, 698, 793, 1550 |
| FriOI | GRGCYC | 2 cut(s) | 364, 532 |
| Fsp4HI | GCNGC | 2 cut(s) | 426, 1361 |
| FspBI | CTAG | 5 cut(s) | 417, 437, 468, 719, 1149 |
| GlaI | GCGC | 2 cut(s) | 350, 472 |
| GluI | GCNGC | 2 cut(s) | 426, 1361 |
| HaeII | RGCGCY | 2 cut(s) | 352, 474 |
| HaeIII | GGCC | 2 cut(s) | 193, 1363 |
| HapII | CCGG | 3 cut(s) | 105, 220, 1370 |
| HhaI | GCGC | 2 cut(s) | 351, 473 |
| Hin1II | CATG | 6 cut(s) | 81, 199, 611, 1058, 1228, 1263 |
| Hin6I | GCGC | 2 cut(s) | 349, 471 |
| HinP1I | GCGC | 2 cut(s) | 349, 471 |
| HincII | GTYRAC | 1 cut(s) | 1137 |
| HindII | GTYRAC | 1 cut(s) | 1137 |
| HindIII | AAGCTT | 4 cut(s) | 878, 894, 1106, 1329 |
| HinfI | GANTC | 7 cut(s) | 655, 680, 921, 1199, 1265, 1409, 1415 |
| HpaII | CCGG | 3 cut(s) | 105, 220, 1370 |
| HphI | GGTGA | 2 cut(s) | 292, 1097 |
| Hpy166II | GTNNAC | 6 cut(s) | 22, 160, 178, 811, 1015, 1137 |
| Hpy188I | TCNGA | 8 cut(s) | 96, 694, 939, 1041, 1079, 1306, 1414, 1567 |
| Hpy188III | TCNNGA | 5 cut(s) | 365, 487, 868, 932, 1458 |
| Hpy8I | GTNNAC | 6 cut(s) | 22, 160, 178, 811, 1015, 1137 |
| HpyAV | CCTTC | 7 cut(s) | 277, 562, 901, 1088, 1181, 1271, 1396 |
| HpyCH4III | ACNGT | 1 cut(s) | 175 |
| HpyCH4IV | ACGT | 1 cut(s) | 264 |
| HpyCH4V | TGCA | 8 cut(s) | 81, 428, 611, 616, 773, 1157, 1484, 1588 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 978, 1337, 1366 |
| HpyF3I | CTNAG | 5 cut(s) | 488, 902, 1076, 1101, 1305 |
| HpySE526I | ACGT | 1 cut(s) | 264 |
| Hsp92II | CATG | 6 cut(s) | 81, 199, 611, 1058, 1228, 1263 |
| HspAI | GCGC | 2 cut(s) | 349, 471 |
| Kzo9I | GATC | 5 cut(s) | 758, 767, 928, 934, 1346 |
| LmnI | GCTCC | 2 cut(s) | 149, 310 |
| Lsp1109I | GCAGC | 1 cut(s) | 412 |
| LweI | GCATC | 2 cut(s) | 412, 1493 |
| MaeI | CTAG | 5 cut(s) | 417, 437, 468, 719, 1149 |
| MaeII | ACGT | 1 cut(s) | 264 |
| MaeIII | GTNAC | 1 cut(s) | 1049 |
| MalI | GATC | 5 cut(s) | 760, 769, 930, 936, 1348 |
| MbiI | CCGCTC | 1 cut(s) | 187 |
| MboI | GATC | 5 cut(s) | 758, 767, 928, 934, 1346 |
| MboII | GAAGA | 6 cut(s) | 130, 614, 797, 1059, 1301, 1306 |
| MfeI | CAATTG | 1 cut(s) | 1583 |
| MflI | RGATCY | 2 cut(s) | 758, 767 |
| MhlI | GDGCHC | 2 cut(s) | 364, 532 |
| MlyI | GAGTC | 1 cut(s) | 1274 |
| Mph1103I | ATGCAT | 2 cut(s) | 613, 1486 |
| MseI | TTAA | 9 cut(s) | 506, 630, 822, 959, 1131, 1182, 1499, 1512, 1530 |
| MslI | CAYNNNNRTG | 2 cut(s) | 165, 869 |
| MspI | CCGG | 3 cut(s) | 105, 220, 1370 |
| MspR9I | CCNGG | 1 cut(s) | 105 |
| MunI | CAATTG | 1 cut(s) | 1583 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 978, 1337, 1366 |
| NciI | CCSGG | 1 cut(s) | 105 |
| NcoI | CCATGG | 1 cut(s) | 195 |
| NdeI | CATATG | 1 cut(s) | 1284 |
| NdeII | GATC | 5 cut(s) | 758, 767, 928, 934, 1346 |
| NheI | GCTAGC | 1 cut(s) | 467 |
| NlaIII | CATG | 6 cut(s) | 81, 199, 611, 1058, 1228, 1263 |
| NlaIV | GGNNCC | 5 cut(s) | 98, 109, 172, 243, 760 |
| NsiI | ATGCAT | 2 cut(s) | 613, 1486 |
| PaeR7I | CTCGAG | 1 cut(s) | 1252 |
| PfeI | GAWTC | 6 cut(s) | 655, 680, 921, 1199, 1409, 1415 |
| PkrI | GCNGC | 2 cut(s) | 427, 1362 |
| PleI | GAGTC | 1 cut(s) | 1273 |
| PpsI | GAGTC | 1 cut(s) | 1273 |
| PpuMI | RGGWCCY | 1 cut(s) | 241 |
| PshBI | ATTAAT | 1 cut(s) | 822 |
| Psp124BI | GAGCTC | 1 cut(s) | 364 |
| Psp5II | RGGWCCY | 1 cut(s) | 241 |
| PspEI | GGTNACC | 1 cut(s) | 1049 |
| PspN4I | GGNNCC | 5 cut(s) | 98, 109, 172, 243, 760 |
| PspPI | GGNCC | 4 cut(s) | 96, 192, 241, 834 |
| PspPPI | RGGWCCY | 1 cut(s) | 241 |
| PspXI | VCTCGAGB | 1 cut(s) | 1252 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 200, 232 |
| PstI | CTGCAG | 1 cut(s) | 775 |
| PsuI | RGATCY | 2 cut(s) | 758, 767 |
| RsaI | GTAC | 3 cut(s) | 344, 863, 1258 |
| RsaNI | GTAC | 3 cut(s) | 343, 862, 1257 |
| RseI | CAYNNNNRTG | 2 cut(s) | 165, 869 |
| SacI | GAGCTC | 1 cut(s) | 364 |
| SaqAI | TTAA | 9 cut(s) | 506, 630, 822, 959, 1131, 1182, 1499, 1512, 1530 |
| SatI | GCNGC | 2 cut(s) | 426, 1361 |
| Sau3AI | GATC | 5 cut(s) | 758, 767, 928, 934, 1346 |
| Sau96I | GGNCC | 4 cut(s) | 96, 192, 241, 834 |
| SchI | GAGTC | 1 cut(s) | 1274 |
| ScrFI | CCNGG | 1 cut(s) | 105 |
| SduI | GDGCHC | 2 cut(s) | 364, 532 |
| SfaNI | GCATC | 2 cut(s) | 412, 1493 |
| SfcI | CTRYAG | 1 cut(s) | 771 |
| Sfr274I | CTCGAG | 1 cut(s) | 1252 |
| SinI | GGWCC | 3 cut(s) | 96, 241, 834 |
| SlaI | CTCGAG | 1 cut(s) | 1252 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 165, 869 |
| SmlI | CTYRAG | 2 cut(s) | 365, 1252 |
| SmoI | CTYRAG | 2 cut(s) | 365, 1252 |
| SsiI | CCGC | 7 cut(s) | 67, 132, 187, 253, 337, 1127, 1360 |
| SspMI | CTAG | 5 cut(s) | 417, 437, 468, 719, 1149 |
| SstI | GAGCTC | 1 cut(s) | 364 |
| StyD4I | CCNGG | 1 cut(s) | 103 |
| StyI | CCWWGG | 2 cut(s) | 195, 763 |
| TaaI | ACNGT | 1 cut(s) | 175 |
| TaiI | ACGT | 1 cut(s) | 267 |
| TaqI | TCGA | 3 cut(s) | 683, 1253, 1392 |
| TatI | WGTACW | 3 cut(s) | 342, 861, 1256 |
| TauI | GCSGC | 1 cut(s) | 1363 |
| TfiI | GAWTC | 6 cut(s) | 655, 680, 921, 1199, 1409, 1415 |
| Tru1I | TTAA | 9 cut(s) | 506, 630, 822, 959, 1131, 1182, 1499, 1512, 1530 |
| Tru9I | TTAA | 9 cut(s) | 506, 630, 822, 959, 1131, 1182, 1499, 1512, 1530 |
| TscAI | CASTG | 2 cut(s) | 281, 979 |
| TseI | GCWGC | 1 cut(s) | 425 |
| TspDTI | ATGAA | 3 cut(s) | 575, 668, 818 |
| TspGWI | ACGGA | 3 cut(s) | 7, 251, 793 |
| TspRI | CASTG | 2 cut(s) | 281, 979 |
| VpaK11BI | GGWCC | 3 cut(s) | 96, 241, 834 |
| VspI | ATTAAT | 1 cut(s) | 822 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 905 |
| XapI | RAATTY | 4 cut(s) | 115, 1042, 1299, 1568 |
| XhoI | CTCGAG | 1 cut(s) | 1252 |
| XmiI | GTMKAC | 1 cut(s) | 1014 |
| XspI | CTAG | 5 cut(s) | 417, 437, 468, 719, 1149 |
| Zsp2I | ATGCAT | 2 cut(s) | 613, 1486 |