Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0006865

Physical Location & Seq

Genomic Coordinates Reverse (-)

11783788 .. 11788161

Gene Structure 4374 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1104100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGGAGGTGGTCAGAGGCGGACGACCCAGAGCCAAACGACGCCGTCTTCGTCCTCGTCGCTGTCCTCATGCTGGTCGCATTTCTGGTCGTCGGCTCTCAGAACCAAACCCTTGGTCTCTCCGTCAGAATCCGCCGTCCGCACCAACTCCGGCGATGGCCTTGTCCGTCGCCTCGGCATGTTTGACCTCATACTCCTCGGCGTCGGCGCTTCTATTGGAGCCGGGATATTCGTCGTCACCGGCACCGTCGCCAAAGACGCCGGTCCTGGGGTCACTATTAGTTTCATTCTTGCCGGAGCATCCTGCGTGTTAAATGCACTCTGTTACGCGGAGCTAGCATCTCGCTTCCCTGCCGTTGTTGGTGGAGCATACCTTTACACATACACGGCTTTCAACGAGCTCACTGCTTTTCTTGTTTTTGCACAACTTATGCTCGACTATCATATTGGTGCCGCTAGTATAGCCCGGAGCTTAGCAAGCTATATCATCACAATTCTGGAACTTTTCCCAGTTTTCAAGGACCACATTCCAGACTGGATTGGACACGGTGGCCAAAAGTTCCTTGGGGGAGCTATATCAATCAATGTATTAGCTCCAATTCTCCTTGCACTTCTTACGATAATCCTCTGTCGTGGTGTGGGAGAATCGTCTGCCGTGAACTCATTTATGACTGCAATGAAGATTATCATTGTTATTATTGTCATCTTCGCTGGTGCTTTTGAGGTTGACGTTTCAAATTGGACTCCATTTACCCCAAATGGTTTCAAACCAATCCTGACAGGAGCAACAGTTGTATTTTTTGCATATGTTGGATTTGATGCTGTTGCTAATTCAGCTGAAGAGTCAAAGAGACCACAGCGAGACTTGCCAATAGGAATTATCGGCAGCCTTCTAATATGTGTTGCATTGTATATTGGTGTCTGTTTGGTGATCACTGGGATGGTACCATTTTATTTACTTGGGGAAGACGCTCCGTTGGCTAATGCTTTTACATCCAAGGGGTTGAGATTTGTTTCAATCTTAATCAGTGTAGGTGCTGTTGCTGGACTTACGACTACCCTTCTAGTTGGTTTGTATGTTCAGTCTCGATTGTATCTTGGGCTTGGAAGAGATGGTTTACTACCTTCAGTGTTTGCTAGAGTACACCCAAAACTCCGCACTCCCATTCATTCTCAGGTCTGGGTTGGTATTGTTTCTGGCATTTTGGCAGGGTTGTTCAATGTGAAGATTCTTTCACACATTCTTTCAGTTGGGTCCTTGACGGGCTACTCTGTTGTTGCTGCATGTGTTGTTTCTCTTCGTTTCAAAGGTAAGGCAGCAAATGAAGTATCTTCTTCTACCTGGCGGGAAGGTGTCATCTGCCTCTTCATAGTGGCATGCGGTGGTTTTGGTGCTGGGCTCTGCTACAGATTTAGTGCTTCAATCGTTTTTCTGGTCCTAACTGTAGTTGTGGCAATACTTGCTCTTGCTGCTCTTTGCTTCCGGCAAGTTTATGCGGATCTCCCAGGGTTTTCTTGCCCTGGTGTTCCATATGTGCCAGCTGTGTGCATCTTCTTCAACATGTTTCTTTTTGCTCAGATACACCATGAAGCATGGGTGAGATTTGTCATCCTCAGCATCATTGTAGTTGGTACTTATGCATTTTATGGGCAATATCATGCGGATCCAAATTCAGAGGAGACCATTATTTATCACAGAACATCAGCAGAAGAACGGTCTAAAACTGCTGTTGCAACAACGGAAGGGACTGCAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016020 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

586

Amino Acids

62.13

Weight (kDa)

8.61

Isoelectric Point (pI)

36.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	58 - 475	1.4e-46	Amino acid permease
AA_permease	PF00324	63 - 436	4.8e-28	Amino acid permease
AA_permease_C	PF13906	504 - 553	3e-16	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05940 AT1G05940 AT1G05940
fragaria_vesca	FvH4_7g09870 FvH4_7g09870 FvH4_7g09870 FvH4_7g09870 FvH4_7g09870
malus_domestica	MD07G1104100.v1.1
prunus_persica	Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1
pyrus_communis	pycom07g08920
rosa_chinensis	RchiOBHm_Chr1g0347411
rosa_laevigata	RLG00000028752
rosa_multiflora	Rmu_sc0009756.1_g000002 Rmu_sc0042207.1_g000001
rosa_roxburghii	Rroxscaffold_4G00307840
rosa_rugosa	Rorug01G0186600 Rorug01G0186700
rosa_samantha	Rh1BG169900 Rh1CG189300 Rh1DG200300
rosa_wichuraiana	Rw1G017130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	943
AccB1I	GGYRCC	3 cut(s)	242, 449, 943
AccII	CGCG	1 cut(s)	329
AclWI	GGATC	3 cut(s)	1506, 1658, 1671
AcoI	YGGCCR	1 cut(s)	550
AcsI	RAATTY	1 cut(s)	1669
AcuI	CTGAAG	2 cut(s)	858, 1110
AcyI	GRCGYC	3 cut(s)	41, 201, 258
AfaI	GTAC	3 cut(s)	945, 1143, 1633
AfiI	CCNNNNNNNGG	2 cut(s)	72, 267
AflIII	ACRYGT	1 cut(s)	1560
AgsI	TTSAA	9 cut(s)	394, 517, 735, 766, 1017, 1219, 1306, 1422, 1558
AjnI	CCWGG	4 cut(s)	265, 1340, 1504, 1519
AluBI	AGCT	8 cut(s)	334, 400, 471, 480, 572, 593, 836, 1541
AluI	AGCT	8 cut(s)	334, 400, 471, 480, 572, 593, 836, 1541
Alw21I	GWGCWC	1 cut(s)	402
Alw26I	GTCTC	5 cut(s)	121, 844, 855, 1089, 1673
AlwI	GGATC	3 cut(s)	1506, 1658, 1671
AoxI	GGCC	2 cut(s)	157, 550
ApeKI	GCWGC	4 cut(s)	885, 1280, 1316, 1469
ApoI	RAATTY	1 cut(s)	1669
ArsI	GACNNNNNNTTYG	4 cut(s)	31, 63, 99, 131
Asp718I	GGTACC	1 cut(s)	943
AspLEI	GCGC	1 cut(s)	209
AspS9I	GGNCC	4 cut(s)	263, 520, 1254, 1435
AsuC2I	CCSGG	2 cut(s)	223, 466
AsuHPI	GGTGA	3 cut(s)	229, 940, 1609
AsuNHI	GCTAGC	1 cut(s)	334
AvaII	GGWCC	4 cut(s)	263, 520, 1254, 1435
BalI	TGGCCA	1 cut(s)	552
BamHI	GGATCC	1 cut(s)	1663
BanI	GGYRCC	3 cut(s)	242, 449, 943
BanII	GRGCYC	2 cut(s)	402, 1401
BbsI	GAAGAC	2 cut(s)	39, 972
Bbv12I	GWGCWC	1 cut(s)	402
BbvCI	CCTCAGC	1 cut(s)	1613
BbvI	GCAGC	4 cut(s)	897, 1267, 1328, 1456
BccI	CCATC	3 cut(s)	149, 934, 1106
BceAI	ACGGC	5 cut(s)	28, 119, 338, 402, 638
BcgI	CGANNNNNNTGC	2 cut(s)	386, 420
BciT130I	CCWGG	4 cut(s)	267, 1342, 1506, 1521
BclI	TGATCA	1 cut(s)	930
BcnI	CCSGG	2 cut(s)	223, 466
BcoDI	GTCTC	5 cut(s)	121, 844, 855, 1089, 1673
BfaI	CTAG	4 cut(s)	335, 456, 1064, 1137
BfmI	CTRYAG	2 cut(s)	1405, 1443
BfoI	RGCGCY	1 cut(s)	210
BisI	GCNGC	5 cut(s)	453, 886, 1281, 1317, 1470
BlpI	GCTNAGC	1 cut(s)	472
BlsI	GCNGC	5 cut(s)	454, 887, 1282, 1318, 1471
Bme1390I	CCNGG	6 cut(s)	223, 267, 466, 1342, 1506, 1521
Bme18I	GGWCC	4 cut(s)	263, 520, 1254, 1435
BmgT120I	GGNCC	4 cut(s)	263, 520, 1254, 1435
BmiI	GGNNCC	6 cut(s)	220, 244, 451, 945, 1255, 1665
BmrFI	CCNGG	6 cut(s)	223, 267, 466, 1342, 1506, 1521
BmrI	ACTGGG	2 cut(s)	503, 945
BmsI	GCATC	5 cut(s)	308, 347, 808, 1557, 1626
BmtI	GCTAGC	1 cut(s)	338
BmuI	ACTGGG	2 cut(s)	503, 945
BoxI	GACNNNNGTC	1 cut(s)	261
BpiI	GAAGAC	2 cut(s)	39, 972
Bpu10I	CCTNAGC	1 cut(s)	1613
Bpu1102I	GCTNAGC	1 cut(s)	472
BpuMI	CCSGG	2 cut(s)	223, 466
BsaHI	GRCGYC	3 cut(s)	41, 201, 258
BsaI	GGTCTC	3 cut(s)	121, 844, 1673
BsaJI	CCNNGG	9 cut(s)	111, 172, 196, 266, 562, 996, 1504, 1505, 1519
BsaXI	ACNNNNNCTCC	2 cut(s)	774, 804
Bsc4I	CCNNNNNNNGG	2 cut(s)	72, 267
Bse118I	RCCGGY	2 cut(s)	239, 260
Bse1I	ACTGG	3 cut(s)	509, 539, 940
Bse3DI	GCAATG	1 cut(s)	681
BseBI	CCWGG	4 cut(s)	267, 1342, 1506, 1521
BseDI	CCNNGG	9 cut(s)	111, 172, 196, 266, 562, 996, 1504, 1505, 1519
BseGI	GGATG	4 cut(s)	299, 945, 992, 1608
BseLI	CCNNNNNNNGG	2 cut(s)	72, 267
BseMI	GCAATG	1 cut(s)	681
BseMII	CTCAG	4 cut(s)	112, 1187, 1589, 1627
BseNI	ACTGG	3 cut(s)	509, 539, 940
BseRI	GAGGAG	2 cut(s)	185, 1691
BseXI	GCAGC	4 cut(s)	897, 1267, 1328, 1456
BseYI	CCCAGC	1 cut(s)	1394
Bsh1236I	CGCG	1 cut(s)	329
BshFI	GGCC	2 cut(s)	159, 552
BshNI	GGYRCC	3 cut(s)	242, 449, 943
BsiHKAI	GWGCWC	1 cut(s)	402
BsiSI	CCGG	7 cut(s)	150, 222, 240, 261, 294, 466, 1483
BslI	CCNNNNNNNGG	2 cut(s)	72, 267
BsmAI	GTCTC	5 cut(s)	121, 844, 855, 1089, 1673
BsnI	GGCC	2 cut(s)	159, 552
Bso31I	GGTCTC	3 cut(s)	121, 844, 1673
Bsp1286I	GDGCHC	2 cut(s)	402, 1401
Bsp143I	GATC	3 cut(s)	930, 1498, 1663
Bsp1720I	GCTNAGC	1 cut(s)	472
BspANI	GGCC	2 cut(s)	159, 552
BspCNI	CTCAG	4 cut(s)	111, 1186, 1588, 1626
BspFNI	CGCG	1 cut(s)	329
BspLI	GGNNCC	6 cut(s)	220, 244, 451, 945, 1255, 1665
BspOI	GCTAGC	1 cut(s)	338
BspPI	GGATC	3 cut(s)	1506, 1658, 1671
BspT107I	GGYRCC	3 cut(s)	242, 449, 943
BspTNI	GGTCTC	3 cut(s)	121, 844, 1673
BsrDI	GCAATG	1 cut(s)	681
BsrFI	RCCGGY	2 cut(s)	239, 260
BsrI	ACTGG	3 cut(s)	509, 539, 940
BssAI	RCCGGY	2 cut(s)	239, 260
BssECI	CCNNGG	9 cut(s)	111, 172, 196, 266, 562, 996, 1504, 1505, 1519
BssMI	GATC	3 cut(s)	930, 1498, 1663
BssNI	GRCGYC	3 cut(s)	41, 201, 258
BssT1I	CCWWGG	3 cut(s)	111, 562, 996
Bst2UI	CCWGG	4 cut(s)	267, 1342, 1506, 1521
Bst4CI	ACNGT	5 cut(s)	247, 548, 790, 1444, 1716
Bst6I	CTCTTC	4 cut(s)	834, 1102, 1302, 1370
BstACI	GRCGYC	3 cut(s)	41, 201, 258
BstAPI	GCANNNNNTGC	1 cut(s)	1460
BstC8I	GCNNGC	4 cut(s)	336, 478, 1378, 1539
BstDEI	CTNAG	5 cut(s)	98, 472, 1173, 1575, 1613
BstF5I	GGATG	4 cut(s)	299, 945, 992, 1608
BstFNI	CGCG	1 cut(s)	329
BstH2I	RGCGCY	1 cut(s)	210
BstHHI	GCGC	1 cut(s)	209
BstKTI	GATC	3 cut(s)	933, 1501, 1666
BstMAI	GTCTC	5 cut(s)	121, 844, 855, 1089, 1673
BstMBI	GATC	3 cut(s)	930, 1498, 1663
BstMWI	GCNNNNNNNGC	9 cut(s)	257, 335, 461, 477, 833, 865, 977, 1460, 1469
BstNI	CCWGG	4 cut(s)	267, 1342, 1506, 1521
BstNSI	RCATGY	4 cut(s)	181, 1287, 1380, 1564
BstPAI	GACNNNNGTC	1 cut(s)	261
BstSCI	CCNGG	6 cut(s)	221, 265, 464, 1340, 1504, 1519
BstSFI	CTRYAG	2 cut(s)	1405, 1443
BstUI	CGCG	1 cut(s)	329
BstV1I	GCAGC	4 cut(s)	897, 1267, 1328, 1456
BstV2I	GAAGAC	2 cut(s)	39, 972
BstX2I	RGATCY	2 cut(s)	1498, 1663
BstXI	CCANNNNNNTGG	1 cut(s)	112
BstYI	RGATCY	2 cut(s)	1498, 1663
BsuRI	GGCC	2 cut(s)	159, 552
BtgZI	GCGATG	1 cut(s)	168
BtsCI	GGATG	4 cut(s)	299, 945, 992, 1608
BtsI	GCAGTG	1 cut(s)	402
BtsIMutI	CAGTG	4 cut(s)	402, 933, 1033, 1134
Cac8I	GCNNGC	4 cut(s)	336, 478, 1378, 1539
CfoI	GCGC	1 cut(s)	209
Cfr10I	RCCGGY	2 cut(s)	239, 260
Cfr13I	GGNCC	4 cut(s)	263, 520, 1254, 1435
CseI	GACGC	4 cut(s)	49, 190, 266, 977
Csp6I	GTAC	3 cut(s)	944, 1142, 1632
CviAII	CATG	8 cut(s)	69, 178, 1284, 1377, 1561, 1586, 1593, 1658
CviQI	GTAC	3 cut(s)	944, 1142, 1632
DdeI	CTNAG	5 cut(s)	98, 472, 1173, 1575, 1613
DpnI	GATC	3 cut(s)	932, 1500, 1665
DpnII	GATC	3 cut(s)	930, 1498, 1663
EaeI	YGGCCR	1 cut(s)	550
Eam1104I	CTCTTC	4 cut(s)	834, 1102, 1302, 1370
EarI	CTCTTC	4 cut(s)	834, 1102, 1302, 1370
EciI	GGCGGA	2 cut(s)	34, 121
Ecl136II	GAGCTC	1 cut(s)	400
Eco130I	CCWWGG	3 cut(s)	111, 562, 996
Eco24I	GRGCYC	2 cut(s)	402, 1401
Eco31I	GGTCTC	3 cut(s)	121, 844, 1673
Eco47I	GGWCC	4 cut(s)	263, 520, 1254, 1435
Eco53kI	GAGCTC	1 cut(s)	400
Eco57I	CTGAAG	2 cut(s)	858, 1110
EcoICRI	GAGCTC	1 cut(s)	400
EcoO109I	RGGNCCY	1 cut(s)	1254
EcoRII	CCWGG	4 cut(s)	265, 1340, 1504, 1519
EcoT14I	CCWWGG	3 cut(s)	111, 562, 996
EcoT22I	ATGCAT	1 cut(s)	1642
EcoT38I	GRGCYC	2 cut(s)	402, 1401
ErhI	CCWWGG	3 cut(s)	111, 562, 996
FaeI	CATG	8 cut(s)	72, 181, 1287, 1380, 1564, 1589, 1596, 1661
FatI	CATG	8 cut(s)	68, 177, 1283, 1376, 1560, 1585, 1592, 1657
FauI	CCCGC	1 cut(s)	1338
FauNDI	CATATG	2 cut(s)	805, 1531
FbaI	TGATCA	1 cut(s)	930
Fnu4HI	GCNGC	5 cut(s)	453, 886, 1281, 1317, 1470
FokI	GGATG	4 cut(s)	286, 952, 979, 1595
FriOI	GRGCYC	2 cut(s)	402, 1401
Fsp4HI	GCNGC	5 cut(s)	453, 886, 1281, 1317, 1470
FspBI	CTAG	4 cut(s)	335, 456, 1064, 1137
GlaI	GCGC	1 cut(s)	208
GluI	GCNGC	5 cut(s)	453, 886, 1281, 1317, 1470
GsaI	CCCAGC	1 cut(s)	1398
HaeII	RGCGCY	1 cut(s)	210
HaeIII	GGCC	2 cut(s)	159, 552
HapII	CCGG	7 cut(s)	150, 222, 240, 261, 294, 466, 1483
HgaI	GACGC	4 cut(s)	49, 190, 266, 977
HhaI	GCGC	1 cut(s)	209
Hin1I	GRCGYC	3 cut(s)	41, 201, 258
Hin1II	CATG	8 cut(s)	72, 181, 1287, 1380, 1564, 1589, 1596, 1661
Hin6I	GCGC	1 cut(s)	207
HinP1I	GCGC	1 cut(s)	207
HincII	GTYRAC	1 cut(s)	727
HindII	GTYRAC	1 cut(s)	727
HinfI	GANTC	5 cut(s)	128, 644, 742, 842, 1228
HpaII	CCGG	7 cut(s)	150, 222, 240, 261, 294, 466, 1483
HphI	GGTGA	3 cut(s)	229, 940, 1609
Hpy166II	GTNNAC	4 cut(s)	658, 727, 1118, 1144
Hpy188I	TCNGA	5 cut(s)	15, 101, 127, 1578, 1675
Hpy188III	TCNNGA	4 cut(s)	497, 530, 775, 1086
Hpy8I	GTNNAC	4 cut(s)	658, 727, 1118, 1144
Hpy99I	CGWCG	7 cut(s)	43, 61, 94, 171, 206, 236, 251
HpyAV	CCTTC	5 cut(s)	899, 1070, 1134, 1343, 1736
HpyCH4III	ACNGT	5 cut(s)	247, 548, 790, 1444, 1716
HpyCH4IV	ACGT	1 cut(s)	729
HpyF10VI	GCNNNNNNNGC	9 cut(s)	257, 335, 461, 477, 833, 865, 977, 1460, 1469
HpyF3I	CTNAG	5 cut(s)	98, 472, 1173, 1575, 1613
HpySE526I	ACGT	1 cut(s)	729
Hsp92I	GRCGYC	3 cut(s)	41, 201, 258
Hsp92II	CATG	8 cut(s)	72, 181, 1287, 1380, 1564, 1589, 1596, 1661
HspAI	GCGC	1 cut(s)	207
KpnI	GGTACC	1 cut(s)	947
Ksp22I	TGATCA	1 cut(s)	930
Kzo9I	GATC	3 cut(s)	930, 1498, 1663
LmnI	GCTCC	9 cut(s)	218, 296, 331, 365, 468, 569, 598, 782, 976
Lsp1109I	GCAGC	4 cut(s)	897, 1267, 1328, 1456
LweI	GCATC	5 cut(s)	308, 347, 808, 1557, 1626
MaeI	CTAG	4 cut(s)	335, 456, 1064, 1137
MaeII	ACGT	1 cut(s)	729
MaeIII	GTNAC	3 cut(s)	235, 271, 323
MalI	GATC	3 cut(s)	932, 1500, 1665
MboI	GATC	3 cut(s)	930, 1498, 1663
MflI	RGATCY	2 cut(s)	1498, 1663
MhlI	GDGCHC	2 cut(s)	402, 1401
MlsI	TGGCCA	1 cut(s)	552
MluCI	AATT	6 cut(s)	492, 597, 736, 829, 876, 1669
MluNI	TGGCCA	1 cut(s)	552
MlyI	GAGTC	2 cut(s)	736, 851
MmeI	TCCRAC	1 cut(s)	790
Mox20I	TGGCCA	1 cut(s)	552
Mph1103I	ATGCAT	1 cut(s)	1642
MscI	TGGCCA	1 cut(s)	552
MseI	TTAA	2 cut(s)	311, 1022
MslI	CAYNNNNRTG	2 cut(s)	447, 938
Msp20I	TGGCCA	1 cut(s)	552
MspA1I	CMGCKG	2 cut(s)	836, 1541
MspI	CCGG	7 cut(s)	150, 222, 240, 261, 294, 466, 1483
MspR9I	CCNGG	6 cut(s)	223, 267, 466, 1342, 1506, 1521
MvaI	CCWGG	4 cut(s)	267, 1342, 1506, 1521
MvnI	CGCG	1 cut(s)	329
MwoI	GCNNNNNNNGC	9 cut(s)	257, 335, 461, 477, 833, 865, 977, 1460, 1469
NciI	CCSGG	2 cut(s)	223, 466
NdeI	CATATG	2 cut(s)	805, 1531
NdeII	GATC	3 cut(s)	930, 1498, 1663
NheI	GCTAGC	1 cut(s)	334
NlaIII	CATG	8 cut(s)	72, 181, 1287, 1380, 1564, 1589, 1596, 1661
NlaIV	GGNNCC	6 cut(s)	220, 244, 451, 945, 1255, 1665
NmeAIII	GCCGAG	2 cut(s)	153, 177
NmuCI	GTSAC	2 cut(s)	235, 271
NsiI	ATGCAT	1 cut(s)	1642
NspI	RCATGY	4 cut(s)	181, 1287, 1380, 1564
PaeI	GCATGC	1 cut(s)	1380
PasI	CCCWGGG	1 cut(s)	1505
PciI	ACATGT	1 cut(s)	1560
PcsI	WCGNNNNNNNCGW	1 cut(s)	47
PfeI	GAWTC	3 cut(s)	128, 644, 1228
PflFI	GACNNNGTC	1 cut(s)	43
PkrI	GCNGC	5 cut(s)	454, 887, 1282, 1318, 1471
PleI	GAGTC	2 cut(s)	736, 850
PpsI	GAGTC	2 cut(s)	736, 850
PpuMI	RGGWCCY	1 cut(s)	1254
PscI	ACATGT	1 cut(s)	1560
PshAI	GACNNNNGTC	1 cut(s)	261
Psp124BI	GAGCTC	1 cut(s)	402
Psp5II	RGGWCCY	1 cut(s)	1254
Psp6I	CCWGG	4 cut(s)	265, 1340, 1504, 1519
PspFI	CCCAGC	1 cut(s)	1394
PspGI	CCWGG	4 cut(s)	265, 1340, 1504, 1519
PspN4I	GGNNCC	6 cut(s)	220, 244, 451, 945, 1255, 1665
PspPI	GGNCC	4 cut(s)	263, 520, 1254, 1435
PspPPI	RGGWCCY	1 cut(s)	1254
PsuI	RGATCY	2 cut(s)	1498, 1663
PsyI	GACNNNGTC	1 cut(s)	43
PvuII	CAGCTG	2 cut(s)	836, 1541
RsaI	GTAC	3 cut(s)	945, 1143, 1633
RsaNI	GTAC	3 cut(s)	944, 1142, 1632
RseI	CAYNNNNRTG	2 cut(s)	447, 938
SacI	GAGCTC	1 cut(s)	402
SaqAI	TTAA	2 cut(s)	311, 1022
SatI	GCNGC	5 cut(s)	453, 886, 1281, 1317, 1470
Sau3AI	GATC	3 cut(s)	930, 1498, 1663
Sau96I	GGNCC	4 cut(s)	263, 520, 1254, 1435
SchI	GAGTC	2 cut(s)	736, 851
ScrFI	CCNGG	6 cut(s)	223, 267, 466, 1342, 1506, 1521
SduI	GDGCHC	2 cut(s)	402, 1401
SfaNI	GCATC	5 cut(s)	308, 347, 808, 1557, 1626
SfcI	CTRYAG	2 cut(s)	1405, 1443
SinI	GGWCC	4 cut(s)	263, 520, 1254, 1435
SmiMI	CAYNNNNRTG	2 cut(s)	447, 938
SphI	GCATGC	1 cut(s)	1380
Sse9I	AATT	6 cut(s)	492, 597, 736, 829, 876, 1669
SspMI	CTAG	4 cut(s)	335, 456, 1064, 1137
SstI	GAGCTC	1 cut(s)	402
StyD4I	CCNGG	6 cut(s)	221, 265, 464, 1340, 1504, 1519
StyI	CCWWGG	3 cut(s)	111, 562, 996
TaaI	ACNGT	5 cut(s)	247, 548, 790, 1444, 1716
TaiI	ACGT	1 cut(s)	732
TaqI	TCGA	2 cut(s)	435, 1087
TasI	AATT	6 cut(s)	492, 597, 736, 829, 876, 1669
TatI	WGTACW	1 cut(s)	1141
TauI	GCSGC	1 cut(s)	455
TfiI	GAWTC	3 cut(s)	128, 644, 1228
Tru1I	TTAA	2 cut(s)	311, 1022
Tru9I	TTAA	2 cut(s)	311, 1022
TscAI	CASTG	4 cut(s)	409, 940, 1033, 1134
TseFI	GTSAC	2 cut(s)	235, 271
TseI	GCWGC	4 cut(s)	885, 1280, 1316, 1469
Tsp45I	GTSAC	2 cut(s)	235, 271
TspDTI	ATGAA	6 cut(s)	274, 692, 1157, 1338, 1357, 1602
TspGWI	ACGGA	4 cut(s)	111, 155, 963, 1754
TspRI	CASTG	4 cut(s)	409, 940, 1033, 1134
Tth111I	GACNNNGTC	1 cut(s)	43
VpaK11BI	GGWCC	4 cut(s)	263, 520, 1254, 1435
XapI	RAATTY	1 cut(s)	1669
XceI	RCATGY	4 cut(s)	181, 1287, 1380, 1564
XcmI	CCANNNNNNNNNTGG	1 cut(s)	560
XspI	CTAG	4 cut(s)	335, 456, 1064, 1137
Zsp2I	ATGCAT	1 cut(s)	1642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.