Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006865

Physical Location & Seq

Genomic Coordinates Reverse (-)

40020263 .. 40024393

Gene Structure 4131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ57351

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGGAGGAGGTCACAGACGGACTTCCGCCGACGACGACGACCAGGCGGCGCCGTCGTCTTCAATCTGGTCGCATTTCTGGTCCTCCGCCACCAGAACCAAGCCCTTATCCGACTCCGGCATCCGTACCAGCTCCGGCGATGGCCTCGTCCGCACCCTCGGCATGTTTGACCTCATACTCCTCGGCGTCGGCGCCTCCATCGGCGCCGGGATCTTCGTCGTCACTGGCACCGTCGCCCGCGACGCCGGTCCCGGAGTCACTGTTAGTTTCATTCTTGCCGGAGCGTCTTGTGTGTTAAATGCACTGTGTTATGCAGAGCTAGCTTCTCGTTTTCCTGCCGTTGTTGGTGGAGCATACCTCTACACGTACACGGCGTTCAATGAGCTGACTGCTTTCCTTGTTTTCGGACAACTTATGCTTGACTATCATATCGGGGCTGCCAGCATAGCTCGAAGCTTAGCGAGCTATGTAGTGACAATTCTTGAACTTTTCCCAATCTTTAAGGAAAACATACCGGACTGGATTGGACATGGTGGCCAACAGTACCTTGGGGGAGCTATATCACTCAATCTCTTAGCTCCAATTCTCCTTGCACTTCTAACTATAGTTCTTTGTCGGGGTGTTGGAGAATCCTCTGCTGTAAACTCATTCATGACTGCTACAAAGATAATCATCGTTCTTATCGTCATCTTCGCTGGTGCTTTTGAGGTTGATGTCTCAAATTGGACTCCCTTTGCCCCAAATGGTTTTAAAACAGTATTGACCGGAGCAACAGTTGTATTCTTTGCATATGTTGGATTTGATGCAGTTGCTAATTCAGCTGAAGAATCAAAGAGACCACAGCGGGACTTGCCAATAGGCATCATAGGCAGCCTTCTGATATGTGTTATATTGTATATCGGTGTCTGTTTGGTGATCACTGGAATGGTACCATATAAATTCCTTGGGGAAGATGCTCCTTTGGCTGATGCTTTTACATCCAAGGGGTTGAAATTTGTTGCCATCTTAATCAGTGTGGGTGCTGTTGCTGGACTTACGACCACCCTTCTAGTCGGTCTGTATGTTCAGTCTCGATTATATCTTGGGCTTGGAAGAGATGGTTTGCTACCTTCAGTGTTTGCTAGAGTACATGCAAGACGTCGAACACCCATTCATTCTCAGGTGTGGGTTGGTATTGTTGCTGGCATTCTGGCAGGGTTGTTTAATGTGCATATTCTCTCGCACATCCTTTCAGTTGGTGCATTGACAGGCTACTCTGTTGTTGCTGCATCTGTGGTTGCTCTTCGTTTGAAGGATAAGGCTTCAAGTCAGGTGTCATCTACGTCCTGGCGGGAAGGTGTCATCTGCTTATTCATAGTTGCATGCAGTGGTTTTGGTGCTGGAGTCTTCTACAGATTCAACACTTCATTTATTTTTATGGTCATAGCTGTGATTGTGGCAATACTTGCTTCCTGTTCTCTTTGTTTCCGCCAAACTTATGCAGATATGCCAGGGTTTTCATGTCCTGGGGTTCCAATTGTGCCAACTATATGCATCTTCTTCAACATGTTTCTATTCGCTCAGTTACACCATGAAGCATGGGTGAGATTTGTCATCCTTAGCATCATTACAGTTGGTATTTATGCATTTTATGGACAATACCATGCTGATCCAACTGCAGAGGAGACTATAATCTATCATAGGGCACCAGAAGACTTGCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016020 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

567

Amino Acids

60.45

Weight (kDa)

7.16

Isoelectric Point (pI)

33.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	53 - 464	1.1e-45	Amino acid permease
AA_permease	PF00324	58 - 457	6e-32	Amino acid permease
AA_permease_C	PF13906	499 - 548	6.8e-17	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05940 AT1G05940 AT1G05940
fragaria_vesca	FvH4_7g09870 FvH4_7g09870 FvH4_7g09870 FvH4_7g09870 FvH4_7g09870
malus_domestica	MD07G1104100.v1.1
prunus_persica	Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1
pyrus_communis	pycom07g08920
rosa_chinensis	RchiOBHm_Chr1g0347411
rosa_laevigata	RLG00000028752
rosa_multiflora	Rmu_sc0009756.1_g000002 Rmu_sc0042207.1_g000001
rosa_roxburghii	Rroxscaffold_4G00307840
rosa_rugosa	Rorug01G0186600 Rorug01G0186700
rosa_samantha	Rh1BG169900 Rh1CG189300 Rh1DG200300
rosa_wichuraiana	Rw1G017130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1141
Acc65I	GGTACC	1 cut(s)	928
AccB1I	GGYRCC	6 cut(s)	49, 191, 203, 227, 928, 1684
AccII	CGCG	1 cut(s)	240
AciI	CCGC	9 cut(s)	27, 47, 87, 151, 238, 844, 1330, 1468, 1699
AclWI	GGATC	2 cut(s)	218, 1643
AcoI	YGGCCR	1 cut(s)	535
AcsI	RAATTY	2 cut(s)	938, 992
AcuI	CTGAAG	2 cut(s)	843, 1095
AcyI	GRCGYC	6 cut(s)	50, 186, 192, 204, 243, 1138
AfaI	GTAC	5 cut(s)	127, 368, 545, 930, 1128
AflIII	ACRYGT	2 cut(s)	363, 1545
AgsI	TTSAA	8 cut(s)	63, 379, 485, 991, 1291, 1305, 1399, 1543
AjnI	CCWGG	4 cut(s)	42, 1325, 1489, 1504
Alw26I	GTCTC	4 cut(s)	721, 829, 1074, 1658
AlwI	GGATC	2 cut(s)	218, 1643
AoxI	GGCC	2 cut(s)	142, 535
ApeKI	GCWGC	3 cut(s)	437, 870, 1265
ApoI	RAATTY	2 cut(s)	938, 992
Asp718I	GGTACC	1 cut(s)	928
AspLEI	GCGC	3 cut(s)	52, 194, 206
AspS9I	GGNCC	2 cut(s)	81, 248
AsuC2I	CCSGG	2 cut(s)	208, 252
AsuHPI	GGTGA	2 cut(s)	925, 1594
AsuNHI	GCTAGC	1 cut(s)	319
AvaII	GGWCC	2 cut(s)	81, 248
BaeGI	GKGCMC	1 cut(s)	1687
BalI	TGGCCA	1 cut(s)	537
BanI	GGYRCC	6 cut(s)	49, 191, 203, 227, 928, 1684
BbsI	GAAGAC	3 cut(s)	51, 1378, 1698
BbvI	GCAGC	3 cut(s)	424, 882, 1252
BccI	CCATC	4 cut(s)	134, 206, 1010, 1091
BceAI	ACGGC	3 cut(s)	37, 323, 387
BciT130I	CCWGG	4 cut(s)	44, 1327, 1491, 1506
BclI	TGATCA	1 cut(s)	915
BcnI	CCSGG	2 cut(s)	208, 252
BcoDI	GTCTC	4 cut(s)	721, 829, 1074, 1658
BfaI	CTAG	3 cut(s)	320, 1049, 1122
BfmI	CTRYAG	3 cut(s)	603, 1390, 1656
BfoI	RGCGCY	3 cut(s)	53, 195, 207
BisI	GCNGC	4 cut(s)	48, 438, 871, 1266
BlpI	GCTNAGC	1 cut(s)	457
BlsI	GCNGC	4 cut(s)	49, 439, 872, 1267
Bme1390I	CCNGG	6 cut(s)	44, 208, 252, 1327, 1491, 1506
Bme18I	GGWCC	2 cut(s)	81, 248
BmgT120I	GGNCC	2 cut(s)	81, 248
BmiI	GGNNCC	8 cut(s)	51, 193, 205, 229, 250, 930, 1512, 1686
BmrFI	CCNGG	6 cut(s)	44, 208, 252, 1327, 1491, 1506
BmsI	GCATC	8 cut(s)	129, 793, 870, 943, 958, 1277, 1542, 1611
BmtI	GCTAGC	1 cut(s)	323
BoxI	GACNNNNGTC	1 cut(s)	246
BpiI	GAAGAC	3 cut(s)	51, 1378, 1698
BplI	GAGNNNNNCTC	2 cut(s)	342, 374
BpmI	CTGGAG	1 cut(s)	1401
Bpu10I	CCTNAGC	1 cut(s)	1598
Bpu1102I	GCTNAGC	1 cut(s)	457
BpuMI	CCSGG	2 cut(s)	208, 252
BsaAI	YACGTR	1 cut(s)	366
BsaBI	GATNNNNATC	1 cut(s)	671
BsaHI	GRCGYC	6 cut(s)	50, 186, 192, 204, 243, 1138
BsaI	GGTCTC	1 cut(s)	829
BsaJI	CCNNGG	7 cut(s)	157, 181, 547, 943, 981, 1490, 1505
BsaWI	WCCGGW	2 cut(s)	514, 764
BsaXI	ACNNNNNCTCC	4 cut(s)	246, 276, 759, 789
Bse118I	RCCGGY	1 cut(s)	245
Bse1I	ACTGG	3 cut(s)	229, 524, 925
Bse8I	GATNNNNATC	1 cut(s)	671
BseBI	CCWGG	4 cut(s)	44, 1327, 1491, 1506
BseDI	CCNNGG	7 cut(s)	157, 181, 547, 943, 981, 1490, 1505
BseGI	GGATG	4 cut(s)	120, 977, 1224, 1593
BseJI	GATNNNNATC	1 cut(s)	671
BseMII	CTCAG	2 cut(s)	1172, 1574
BseNI	ACTGG	3 cut(s)	229, 524, 925
BseRI	GAGGAG	3 cut(s)	21, 170, 1676
BseSI	GKGCMC	1 cut(s)	1687
BseXI	GCAGC	3 cut(s)	424, 882, 1252
Bsh1236I	CGCG	1 cut(s)	240
BshFI	GGCC	2 cut(s)	144, 537
BshNI	GGYRCC	6 cut(s)	49, 191, 203, 227, 928, 1684
BsiSI	CCGG	8 cut(s)	117, 135, 207, 246, 252, 279, 515, 765
BslFI	GGGAC	2 cut(s)	234, 860
BsmAI	GTCTC	4 cut(s)	721, 829, 1074, 1658
BsmFI	GGGAC	2 cut(s)	234, 860
BsmI	GAATGC	1 cut(s)	1185
BsnI	GGCC	2 cut(s)	144, 537
Bso31I	GGTCTC	1 cut(s)	829
Bsp1286I	GDGCHC	1 cut(s)	1687
Bsp143I	GATC	3 cut(s)	210, 915, 1648
Bsp1720I	GCTNAGC	1 cut(s)	457
BspACI	CCGC	9 cut(s)	27, 47, 87, 151, 238, 844, 1330, 1468, 1699
BspANI	GGCC	2 cut(s)	144, 537
BspCNI	CTCAG	2 cut(s)	1171, 1573
BspFNI	CGCG	1 cut(s)	240
BspHI	TCATGA	1 cut(s)	651
BspLI	GGNNCC	8 cut(s)	51, 193, 205, 229, 250, 930, 1512, 1686
BspMAI	CTGCAG	1 cut(s)	1660
BspOI	GCTAGC	1 cut(s)	323
BspPI	GGATC	2 cut(s)	218, 1643
BspQI	GCTCTTC	1 cut(s)	1287
BspT107I	GGYRCC	6 cut(s)	49, 191, 203, 227, 928, 1684
BspTNI	GGTCTC	1 cut(s)	829
BsrFI	RCCGGY	1 cut(s)	245
BsrI	ACTGG	3 cut(s)	229, 524, 925
BssAI	RCCGGY	1 cut(s)	245
BssECI	CCNNGG	7 cut(s)	157, 181, 547, 943, 981, 1490, 1505
BssMI	GATC	3 cut(s)	210, 915, 1648
BssNI	GRCGYC	6 cut(s)	50, 186, 192, 204, 243, 1138
BssT1I	CCWWGG	3 cut(s)	547, 943, 981
Bst2UI	CCWGG	4 cut(s)	44, 1327, 1491, 1506
Bst4CI	ACNGT	7 cut(s)	232, 262, 306, 543, 757, 775, 1612
Bst6I	CTCTTC	2 cut(s)	1087, 1287
BstACI	GRCGYC	6 cut(s)	50, 186, 192, 204, 243, 1138
BstAPI	GCANNNNNTGC	1 cut(s)	1445
BstBAI	YACGTR	1 cut(s)	366
BstC8I	GCNNGC	6 cut(s)	238, 321, 442, 463, 1183, 1363
BstDEI	CTNAG	5 cut(s)	457, 574, 1158, 1560, 1598
BstF5I	GGATG	4 cut(s)	120, 977, 1224, 1593
BstFNI	CGCG	1 cut(s)	240
BstH2I	RGCGCY	3 cut(s)	53, 195, 207
BstHHI	GCGC	3 cut(s)	52, 194, 206
BstKTI	GATC	3 cut(s)	213, 918, 1651
BstMAI	GTCTC	4 cut(s)	721, 829, 1074, 1658
BstMBI	GATC	3 cut(s)	210, 915, 1648
BstNI	CCWGG	4 cut(s)	44, 1327, 1491, 1506
BstNSI	RCATGY	4 cut(s)	166, 1133, 1365, 1549
BstPAI	GACNNNNGTC	1 cut(s)	246
BstSCI	CCNGG	6 cut(s)	42, 206, 250, 1325, 1489, 1504
BstSFI	CTRYAG	3 cut(s)	603, 1390, 1656
BstSLI	GKGCMC	1 cut(s)	1687
BstUI	CGCG	1 cut(s)	240
BstV1I	GCAGC	3 cut(s)	424, 882, 1252
BstV2I	GAAGAC	3 cut(s)	51, 1378, 1698
BstX2I	RGATCY	1 cut(s)	210
BstYI	RGATCY	1 cut(s)	210
BsuRI	GGCC	2 cut(s)	144, 537
BtgZI	GCGATG	1 cut(s)	153
BtsCI	GGATG	4 cut(s)	120, 977, 1224, 1593
BtsI	GCAGTG	1 cut(s)	1372
BtsIMutI	CAGTG	7 cut(s)	222, 258, 302, 918, 1018, 1119, 1372
Cac8I	GCNNGC	6 cut(s)	238, 321, 442, 463, 1183, 1363
CciI	TCATGA	1 cut(s)	651
CfoI	GCGC	3 cut(s)	52, 194, 206
Cfr10I	RCCGGY	1 cut(s)	245
Cfr13I	GGNCC	2 cut(s)	81, 248
CseI	GACGC	3 cut(s)	175, 251, 273
Csp6I	GTAC	5 cut(s)	126, 367, 544, 929, 1127
CviQI	GTAC	5 cut(s)	126, 367, 544, 929, 1127
DdeI	CTNAG	5 cut(s)	457, 574, 1158, 1560, 1598
DinI	GGCGCC	3 cut(s)	51, 193, 205
DpnI	GATC	3 cut(s)	212, 917, 1650
DpnII	GATC	3 cut(s)	210, 915, 1648
DraI	TTTAAA	1 cut(s)	751
EaeI	YGGCCR	1 cut(s)	535
Eam1104I	CTCTTC	2 cut(s)	1087, 1287
EarI	CTCTTC	2 cut(s)	1087, 1287
EciI	GGCGGA	3 cut(s)	16, 76, 1457
Eco130I	CCWWGG	3 cut(s)	547, 943, 981
Eco31I	GGTCTC	1 cut(s)	829
Eco47I	GGWCC	2 cut(s)	81, 248
Eco57I	CTGAAG	2 cut(s)	843, 1095
EcoRII	CCWGG	4 cut(s)	42, 1325, 1489, 1504
EcoT14I	CCWWGG	3 cut(s)	547, 943, 981
EcoT22I	ATGCAT	2 cut(s)	1535, 1627
EgeI	GGCGCC	3 cut(s)	51, 193, 205
EheI	GGCGCC	3 cut(s)	51, 193, 205
ErhI	CCWWGG	3 cut(s)	547, 943, 981
FaqI	GGGAC	2 cut(s)	234, 860
FauI	CCCGC	3 cut(s)	245, 837, 1323
FauNDI	CATATG	1 cut(s)	790
FbaI	TGATCA	1 cut(s)	915
Fnu4HI	GCNGC	4 cut(s)	48, 438, 871, 1266
FokI	GGATG	4 cut(s)	107, 964, 1211, 1580
Fsp4HI	GCNGC	4 cut(s)	48, 438, 871, 1266
FspBI	CTAG	3 cut(s)	320, 1049, 1122
GlaI	GCGC	3 cut(s)	51, 193, 205
GluI	GCNGC	4 cut(s)	48, 438, 871, 1266
GsuI	CTGGAG	1 cut(s)	1401
HaeII	RGCGCY	3 cut(s)	53, 195, 207
HaeIII	GGCC	2 cut(s)	144, 537
HapII	CCGG	8 cut(s)	117, 135, 207, 246, 252, 279, 515, 765
HgaI	GACGC	3 cut(s)	175, 251, 273
HhaI	GCGC	3 cut(s)	52, 194, 206
Hin1I	GRCGYC	6 cut(s)	50, 186, 192, 204, 243, 1138
Hin6I	GCGC	3 cut(s)	50, 192, 204
HinP1I	GCGC	3 cut(s)	50, 192, 204
HindIII	AAGCTT	1 cut(s)	454
HinfI	GANTC	7 cut(s)	113, 255, 629, 727, 827, 1383, 1395
HpaII	CCGG	8 cut(s)	117, 135, 207, 246, 252, 279, 515, 765
HphI	GGTGA	2 cut(s)	925, 1594
Hpy166II	GTNNAC	2 cut(s)	369, 643
Hpy188I	TCNGA	3 cut(s)	112, 407, 879
Hpy188III	TCNNGA	3 cut(s)	482, 652, 1071
Hpy8I	GTNNAC	2 cut(s)	369, 643
Hpy99I	CGWCG	9 cut(s)	35, 38, 41, 58, 191, 221, 236, 245, 1143
HpyAV	CCTTC	5 cut(s)	884, 1055, 1119, 1285, 1328
HpyCH4III	ACNGT	7 cut(s)	232, 262, 306, 543, 757, 775, 1612
HpyCH4IV	ACGT	3 cut(s)	365, 1138, 1322
HpyF3I	CTNAG	5 cut(s)	457, 574, 1158, 1560, 1598
HpySE526I	ACGT	3 cut(s)	365, 1138, 1322
Hsp92I	GRCGYC	6 cut(s)	50, 186, 192, 204, 243, 1138
HspAI	GCGC	3 cut(s)	50, 192, 204
KasI	GGCGCC	3 cut(s)	49, 191, 203
KpnI	GGTACC	1 cut(s)	932
Ksp22I	TGATCA	1 cut(s)	915
Kzo9I	GATC	3 cut(s)	210, 915, 1648
LguI	GCTCTTC	1 cut(s)	1287
LmnI	GCTCC	7 cut(s)	137, 281, 350, 554, 583, 767, 961
Lsp1109I	GCAGC	3 cut(s)	424, 882, 1252
LweI	GCATC	8 cut(s)	129, 793, 870, 943, 958, 1277, 1542, 1611
MaeI	CTAG	3 cut(s)	320, 1049, 1122
MaeII	ACGT	3 cut(s)	365, 1138, 1322
MaeIII	GTNAC	5 cut(s)	11, 220, 256, 472, 1563
MalI	GATC	3 cut(s)	212, 917, 1650
MboI	GATC	3 cut(s)	210, 915, 1648
MfeI	CAATTG	1 cut(s)	1515
MflI	RGATCY	1 cut(s)	210
MhlI	GDGCHC	1 cut(s)	1687
MlsI	TGGCCA	1 cut(s)	537
MluCI	AATT	7 cut(s)	477, 582, 721, 814, 938, 992, 1515
MluNI	TGGCCA	1 cut(s)	537
Mly113I	GGCGCC	3 cut(s)	50, 192, 204
MlyI	GAGTC	4 cut(s)	107, 264, 721, 1392
MmeI	TCCRAC	4 cut(s)	135, 604, 775, 1676
Mox20I	TGGCCA	1 cut(s)	537
Mph1103I	ATGCAT	2 cut(s)	1535, 1627
MscI	TGGCCA	1 cut(s)	537
MseI	TTAA	5 cut(s)	296, 501, 750, 1007, 1203
MslI	CAYNNNNRTG	2 cut(s)	923, 1427
Msp20I	TGGCCA	1 cut(s)	537
MspA1I	CMGCKG	2 cut(s)	821, 844
MspI	CCGG	8 cut(s)	117, 135, 207, 246, 252, 279, 515, 765
MspR9I	CCNGG	6 cut(s)	44, 208, 252, 1327, 1491, 1506
MunI	CAATTG	1 cut(s)	1515
Mva1269I	GAATGC	1 cut(s)	1185
MvaI	CCWGG	4 cut(s)	44, 1327, 1491, 1506
MvnI	CGCG	1 cut(s)	240
NarI	GGCGCC	3 cut(s)	50, 192, 204
NciI	CCSGG	2 cut(s)	208, 252
NdeI	CATATG	1 cut(s)	790
NdeII	GATC	3 cut(s)	210, 915, 1648
NheI	GCTAGC	1 cut(s)	319
NlaIV	GGNNCC	8 cut(s)	51, 193, 205, 229, 250, 930, 1512, 1686
NmeAIII	GCCGAG	2 cut(s)	138, 162
NmuCI	GTSAC	4 cut(s)	11, 220, 256, 472
NsiI	ATGCAT	2 cut(s)	1535, 1627
NspI	RCATGY	4 cut(s)	166, 1133, 1365, 1549
PaeI	GCATGC	1 cut(s)	1365
PagI	TCATGA	1 cut(s)	651
PciI	ACATGT	1 cut(s)	1545
PciSI	GCTCTTC	1 cut(s)	1287
PcsI	WCGNNNNNNNCGW	2 cut(s)	371, 681
PctI	GAATGC	1 cut(s)	1185
PfeI	GAWTC	3 cut(s)	629, 827, 1395
PfoI	TCCNGGA	1 cut(s)	250
PkrI	GCNGC	4 cut(s)	49, 439, 872, 1267
PleI	GAGTC	4 cut(s)	107, 263, 721, 1391
PluTI	GGCGCC	3 cut(s)	53, 195, 207
PpsI	GAGTC	4 cut(s)	107, 263, 721, 1391
Ppu21I	YACGTR	1 cut(s)	366
PscI	ACATGT	1 cut(s)	1545
PshAI	GACNNNNGTC	1 cut(s)	246
Psp6I	CCWGG	4 cut(s)	42, 1325, 1489, 1504
PspGI	CCWGG	4 cut(s)	42, 1325, 1489, 1504
PspN4I	GGNNCC	8 cut(s)	51, 193, 205, 229, 250, 930, 1512, 1686
PspPI	GGNCC	2 cut(s)	81, 248
PsrI	GAACNNNNNNTAC	2 cut(s)	359, 391
PstI	CTGCAG	1 cut(s)	1660
PsuI	RGATCY	1 cut(s)	210
PvuII	CAGCTG	1 cut(s)	821
RsaI	GTAC	5 cut(s)	127, 368, 545, 930, 1128
RsaNI	GTAC	5 cut(s)	126, 367, 544, 929, 1127
RseI	CAYNNNNRTG	2 cut(s)	923, 1427
SapI	GCTCTTC	1 cut(s)	1287
SaqAI	TTAA	5 cut(s)	296, 501, 750, 1007, 1203
SatI	GCNGC	4 cut(s)	48, 438, 871, 1266
Sau3AI	GATC	3 cut(s)	210, 915, 1648
Sau96I	GGNCC	2 cut(s)	81, 248
SchI	GAGTC	4 cut(s)	107, 264, 721, 1392
ScrFI	CCNGG	6 cut(s)	44, 208, 252, 1327, 1491, 1506
SduI	GDGCHC	1 cut(s)	1687
SfaNI	GCATC	8 cut(s)	129, 793, 870, 943, 958, 1277, 1542, 1611
SfcI	CTRYAG	3 cut(s)	603, 1390, 1656
SfoI	GGCGCC	3 cut(s)	51, 193, 205
SinI	GGWCC	2 cut(s)	81, 248
SmiMI	CAYNNNNRTG	2 cut(s)	923, 1427
SphI	GCATGC	1 cut(s)	1365
Sse9I	AATT	7 cut(s)	477, 582, 721, 814, 938, 992, 1515
SsiI	CCGC	9 cut(s)	27, 47, 87, 151, 238, 844, 1330, 1468, 1699
SspDI	GGCGCC	3 cut(s)	49, 191, 203
SspMI	CTAG	3 cut(s)	320, 1049, 1122
StyD4I	CCNGG	6 cut(s)	42, 206, 250, 1325, 1489, 1504
StyI	CCWWGG	3 cut(s)	547, 943, 981
TaaI	ACNGT	7 cut(s)	232, 262, 306, 543, 757, 775, 1612
TaiI	ACGT	3 cut(s)	368, 1141, 1325
TaqI	TCGA	3 cut(s)	451, 1072, 1141
TaqII	GACCGA	1 cut(s)	1043
TasI	AATT	7 cut(s)	477, 582, 721, 814, 938, 992, 1515
TatI	WGTACW	1 cut(s)	1126
TauI	GCSGC	1 cut(s)	50
TfiI	GAWTC	3 cut(s)	629, 827, 1395
Tru1I	TTAA	5 cut(s)	296, 501, 750, 1007, 1203
Tru9I	TTAA	5 cut(s)	296, 501, 750, 1007, 1203
TscAI	CASTG	7 cut(s)	229, 265, 309, 925, 1018, 1119, 1372
TseFI	GTSAC	4 cut(s)	11, 220, 256, 472
TseI	GCWGC	3 cut(s)	437, 870, 1265
Tsp45I	GTSAC	4 cut(s)	11, 220, 256, 472
TspDTI	ATGAA	7 cut(s)	259, 640, 1142, 1342, 1395, 1488, 1587
TspGWI	ACGGA	2 cut(s)	34, 113
TspRI	CASTG	7 cut(s)	229, 265, 309, 925, 1018, 1119, 1372
VpaK11BI	GGWCC	2 cut(s)	81, 248
XapI	RAATTY	2 cut(s)	938, 992
XceI	RCATGY	4 cut(s)	166, 1133, 1365, 1549
XcmI	CCANNNNNNNNNTGG	1 cut(s)	545
XspI	CTAG	3 cut(s)	320, 1049, 1122
ZraI	GACGTC	1 cut(s)	1139
Zsp2I	ATGCAT	2 cut(s)	1535, 1627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.