Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0006865

Physical Location & Seq

Genomic Coordinates Reverse (-)

39288099 .. 39291835

Gene Structure 3737 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG200300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGGAGGAGGTCACAGACGGACTTCCGCCGACGAAGACCAGGCGGCGCCGTCGTCTTCAATCTGGTCGCATTTCTGGTCATCCGCCACCAGAACCAAGCCCTTATCCGACTCCGGCATCCGTACCAGCTCCGGCGATGGCCTCGTCCGTACCCTCGGCATGTTTGACCTCATACTCCTCGGCGTCGGCGCTTCCATCGGCGCCGGGATCTTCGTCGTCACTGGTACCGTCGCACGCGACGCCGGTCCCGGAGTCACTGTTAGTTTCATTCTTGCGGGAGCGTCTTGTGTGTTAAATGCACTCTGTTATGCGGAGCTAGCTTCTCGGTTTCCTGCCGTTGTTGGTGGAGCATACCTTTACACGTACACGGCGTTCAATGAGCTGACTGCTTTCCTTGTTTTCGGACAACTTATGCTTGACTATCATATCGGGGCTGCCAGCATAGCTCGAAGCTTAGCGAGCTATGTAGTGACAATTCTAGAACTTTTCCCTATCTTTAAGGAAAATATACCGGACTGGATTGGACATGGTGGCCAACAGTACCTTGGGGGAGCTATATCACTTAATCTCTTAGCTCCAATTCTCCTTGCACTTCTAACTATAGTTCTTTGTCGGGGTGTTGGAGAATCCTCTGCTGTAAACTCATTCATGACTGCTACAAAGATAATCATCGTTCTTATCGTCATCTTCGCTGGTGCTTTTGAGGTTGATGTTTCAAATTGGACTCCCTTTGCCCCAAATGGTTTTAAAACAGTATTGACCGGAGCAACAGTTGTATTCTTTGCATATGTTGGATTTGATGCAGTTGCTAATTCAGCTGAAGAATCAAAGAGACCACAGCGGGACTTGCCAATAGCCATCATAGGCAGCCTTCTGATATGTGTTATATTGTATATCGGTGTCTGTTTGGTGATCACTGGAATGGTACCATATAAATTCCTTGGGGAAGATGCTCCTTTGGCTGATGCTTTTACATCCAAGGGGTTGAAGTTTGTTGCCATCTTAATCAGTGTTGGCGCTGTTGCTGGACTTACGACTACCCTTCTAGTTGGTCTCTATGTTCAGTCTCGATTATATCTTGGGCTTGGAAGAGATGGTTTACTACCTTCAGTGTTTGCTAGAGTACACACAAAACGCCGAACTCCCATTCATTCTCAGGTGTGGGTTGGTATTGTTGCTGGCATTCTGGCAGGGTTGTTTAATGTGCATATTCTCTCGCATATCCTTTCAGTTGGCGCATTGACAGGCTACTCTGTTGTTGCTGCATCTGTGGTTGCTCTTCGTTTGAAGGATAAGGCATCTAGTCTGGTGTCATCTACGTCCTGGCGGGAAGGTGTCATCTGCTTATTCATAGTTGCATGCAGTGGTTTTGGTGCTGGAGTCTTCTACAGATTCAACACTTCATTTATTTTTATGGTCATAGCTGTGATTGTGGCAATACTTGCTTCGTGTGCTCTTTGTTTCCGCCAAACTTATGCAGATATGCCAGGGTTTTCGTGTCCTGGGGTTCCAATTGTACCAACTGTATGCATCTTCTTCAACATGTTTCTATTCGCTCAGTTACACCATGAAGCATGGGTGAGATTTATCATCCTCAGCATCATTACAGTTGGTATTTATGCATTTTATGGACAATACCATGCTGATCCAACTGCAGAGGAGACTATCATTTATCATAGGGCACCAGAAGACTTGCGGGGAAAAGATAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016020 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

570

Amino Acids

60.75

Weight (kDa)

7.58

Isoelectric Point (pI)

32.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	52 - 536	3.2e-46	Amino acid permease
AA_permease	PF00324	57 - 446	6.1e-31	Amino acid permease
AA_permease_C	PF13906	498 - 547	7.3e-17	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05940 AT1G05940 AT1G05940
fragaria_vesca	FvH4_7g09870 FvH4_7g09870 FvH4_7g09870 FvH4_7g09870 FvH4_7g09870
malus_domestica	MD07G1104100.v1.1
prunus_persica	Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1
pyrus_communis	pycom07g08920
rosa_chinensis	RchiOBHm_Chr1g0347411
rosa_laevigata	RLG00000028752
rosa_multiflora	Rmu_sc0009756.1_g000002 Rmu_sc0042207.1_g000001
rosa_roxburghii	Rroxscaffold_4G00307840
rosa_rugosa	Rorug01G0186600 Rorug01G0186700
rosa_samantha	Rh1BG169900 Rh1CG189300 Rh1DG200300
rosa_wichuraiana	Rw1G017130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	224, 925
AccB1I	GGYRCC	5 cut(s)	46, 200, 224, 925, 1681
AccII	CGCG	1 cut(s)	237
AciI	CCGC	9 cut(s)	27, 44, 84, 275, 311, 841, 1327, 1465, 1696
AclWI	GGATC	2 cut(s)	215, 1640
AcoI	YGGCCR	1 cut(s)	532
AcsI	RAATTY	1 cut(s)	935
AcuI	CTGAAG	2 cut(s)	840, 1092
AcyI	GRCGYC	4 cut(s)	47, 183, 201, 240
AfaI	GTAC	8 cut(s)	124, 151, 226, 365, 542, 927, 1125, 1518
AflIII	ACRYGT	2 cut(s)	360, 1542
AgsI	TTSAA	7 cut(s)	60, 376, 717, 988, 1288, 1396, 1540
AjnI	CCWGG	4 cut(s)	39, 1322, 1486, 1501
Alw21I	GWGCWC	1 cut(s)	1456
Alw26I	GTCTC	4 cut(s)	826, 1058, 1071, 1655
AlwI	GGATC	2 cut(s)	215, 1640
AoxI	GGCC	2 cut(s)	139, 532
ApeKI	GCWGC	3 cut(s)	434, 867, 1262
ApoI	RAATTY	1 cut(s)	935
Asp718I	GGTACC	2 cut(s)	224, 925
AspLEI	GCGC	5 cut(s)	49, 191, 203, 1019, 1238
AspS9I	GGNCC	1 cut(s)	245
AsuC2I	CCSGG	2 cut(s)	205, 249
AsuHPI	GGTGA	2 cut(s)	922, 1591
AsuNHI	GCTAGC	1 cut(s)	316
AvaII	GGWCC	1 cut(s)	245
BaeGI	GKGCMC	1 cut(s)	1684
BalI	TGGCCA	1 cut(s)	534
BanI	GGYRCC	5 cut(s)	46, 200, 224, 925, 1681
BbsI	GAAGAC	4 cut(s)	42, 48, 1375, 1695
Bbv12I	GWGCWC	1 cut(s)	1456
BbvCI	CCTCAGC	1 cut(s)	1595
BbvI	GCAGC	3 cut(s)	421, 879, 1249
BccI	CCATC	5 cut(s)	131, 203, 866, 1007, 1088
BceAI	ACGGC	3 cut(s)	34, 320, 384
BciT130I	CCWGG	4 cut(s)	41, 1324, 1488, 1503
BclI	TGATCA	1 cut(s)	912
BcnI	CCSGG	2 cut(s)	205, 249
BcoDI	GTCTC	4 cut(s)	826, 1058, 1071, 1655
BfaI	CTAG	5 cut(s)	317, 479, 1046, 1119, 1302
BfmI	CTRYAG	3 cut(s)	600, 1387, 1653
BfoI	RGCGCY	4 cut(s)	50, 192, 204, 1020
BisI	GCNGC	4 cut(s)	45, 435, 868, 1263
BlpI	GCTNAGC	1 cut(s)	454
BlsI	GCNGC	4 cut(s)	46, 436, 869, 1264
Bme1390I	CCNGG	6 cut(s)	41, 205, 249, 1324, 1488, 1503
Bme18I	GGWCC	1 cut(s)	245
BmgT120I	GGNCC	1 cut(s)	245
BmiI	GGNNCC	7 cut(s)	48, 202, 226, 247, 927, 1509, 1683
BmrFI	CCNGG	6 cut(s)	41, 205, 249, 1324, 1488, 1503
BmsI	GCATC	8 cut(s)	126, 790, 940, 955, 1274, 1307, 1539, 1608
BmtI	GCTAGC	1 cut(s)	320
BoxI	GACNNNNGTC	1 cut(s)	243
BpiI	GAAGAC	4 cut(s)	42, 48, 1375, 1695
BpmI	CTGGAG	1 cut(s)	1398
Bpu10I	CCTNAGC	1 cut(s)	1595
Bpu1102I	GCTNAGC	1 cut(s)	454
BpuMI	CCSGG	2 cut(s)	205, 249
BsaAI	YACGTR	1 cut(s)	363
BsaBI	GATNNNNATC	1 cut(s)	668
BsaHI	GRCGYC	4 cut(s)	47, 183, 201, 240
BsaI	GGTCTC	2 cut(s)	826, 1058
BsaJI	CCNNGG	7 cut(s)	154, 178, 544, 940, 978, 1487, 1502
BsaWI	WCCGGW	2 cut(s)	511, 761
BsaXI	ACNNNNNCTCC	4 cut(s)	243, 273, 756, 786
Bse118I	RCCGGY	1 cut(s)	242
Bse1I	ACTGG	3 cut(s)	226, 521, 922
Bse8I	GATNNNNATC	1 cut(s)	668
BseBI	CCWGG	4 cut(s)	41, 1324, 1488, 1503
BseDI	CCNNGG	7 cut(s)	154, 178, 544, 940, 978, 1487, 1502
BseGI	GGATG	4 cut(s)	80, 117, 974, 1590
BseJI	GATNNNNATC	1 cut(s)	668
BseMII	CTCAG	3 cut(s)	1169, 1571, 1609
BseNI	ACTGG	3 cut(s)	226, 521, 922
BseRI	GAGGAG	3 cut(s)	21, 167, 1673
BseSI	GKGCMC	1 cut(s)	1684
BseXI	GCAGC	3 cut(s)	421, 879, 1249
Bsh1236I	CGCG	1 cut(s)	237
BshFI	GGCC	2 cut(s)	141, 534
BshNI	GGYRCC	5 cut(s)	46, 200, 224, 925, 1681
BsiHKAI	GWGCWC	1 cut(s)	1456
BsiSI	CCGG	7 cut(s)	114, 132, 204, 243, 249, 512, 762
BslFI	GGGAC	2 cut(s)	231, 857
BsmAI	GTCTC	4 cut(s)	826, 1058, 1071, 1655
BsmFI	GGGAC	2 cut(s)	231, 857
BsmI	GAATGC	1 cut(s)	1182
BsnI	GGCC	2 cut(s)	141, 534
Bso31I	GGTCTC	2 cut(s)	826, 1058
Bsp1286I	GDGCHC	2 cut(s)	1456, 1684
Bsp143I	GATC	3 cut(s)	207, 912, 1645
Bsp1720I	GCTNAGC	1 cut(s)	454
BspACI	CCGC	9 cut(s)	27, 44, 84, 275, 311, 841, 1327, 1465, 1696
BspANI	GGCC	2 cut(s)	141, 534
BspCNI	CTCAG	3 cut(s)	1168, 1570, 1608
BspFNI	CGCG	1 cut(s)	237
BspHI	TCATGA	1 cut(s)	648
BspLI	GGNNCC	7 cut(s)	48, 202, 226, 247, 927, 1509, 1683
BspMAI	CTGCAG	1 cut(s)	1657
BspOI	GCTAGC	1 cut(s)	320
BspPI	GGATC	2 cut(s)	215, 1640
BspQI	GCTCTTC	1 cut(s)	1284
BspT107I	GGYRCC	5 cut(s)	46, 200, 224, 925, 1681
BspTNI	GGTCTC	2 cut(s)	826, 1058
BsrFI	RCCGGY	1 cut(s)	242
BsrI	ACTGG	3 cut(s)	226, 521, 922
BssAI	RCCGGY	1 cut(s)	242
BssECI	CCNNGG	7 cut(s)	154, 178, 544, 940, 978, 1487, 1502
BssMI	GATC	3 cut(s)	207, 912, 1645
BssNI	GRCGYC	4 cut(s)	47, 183, 201, 240
BssT1I	CCWWGG	3 cut(s)	544, 940, 978
Bst2UI	CCWGG	4 cut(s)	41, 1324, 1488, 1503
Bst4CI	ACNGT	7 cut(s)	229, 259, 540, 754, 772, 1525, 1609
Bst6I	CTCTTC	2 cut(s)	1084, 1284
BstACI	GRCGYC	4 cut(s)	47, 183, 201, 240
BstAPI	GCANNNNNTGC	1 cut(s)	1442
BstBAI	YACGTR	1 cut(s)	363
BstC8I	GCNNGC	6 cut(s)	235, 318, 439, 460, 1180, 1360
BstDEI	CTNAG	5 cut(s)	454, 571, 1155, 1557, 1595
BstF5I	GGATG	4 cut(s)	80, 117, 974, 1590
BstFNI	CGCG	1 cut(s)	237
BstH2I	RGCGCY	4 cut(s)	50, 192, 204, 1020
BstHHI	GCGC	5 cut(s)	49, 191, 203, 1019, 1238
BstKTI	GATC	3 cut(s)	210, 915, 1648
BstMAI	GTCTC	4 cut(s)	826, 1058, 1071, 1655
BstMBI	GATC	3 cut(s)	207, 912, 1645
BstMWI	GCNNNNNNNGC	9 cut(s)	239, 317, 443, 459, 815, 847, 959, 1442, 1451
BstNI	CCWGG	4 cut(s)	41, 1324, 1488, 1503
BstNSI	RCATGY	3 cut(s)	163, 1362, 1546
BstPAI	GACNNNNGTC	1 cut(s)	243
BstSCI	CCNGG	6 cut(s)	39, 203, 247, 1322, 1486, 1501
BstSFI	CTRYAG	3 cut(s)	600, 1387, 1653
BstSLI	GKGCMC	1 cut(s)	1684
BstUI	CGCG	1 cut(s)	237
BstV1I	GCAGC	3 cut(s)	421, 879, 1249
BstV2I	GAAGAC	4 cut(s)	42, 48, 1375, 1695
BstX2I	RGATCY	1 cut(s)	207
BstYI	RGATCY	1 cut(s)	207
BsuRI	GGCC	2 cut(s)	141, 534
BtgZI	GCGATG	1 cut(s)	150
BtsCI	GGATG	4 cut(s)	80, 117, 974, 1590
BtsI	GCAGTG	1 cut(s)	1369
BtsIMutI	CAGTG	6 cut(s)	219, 255, 915, 1015, 1116, 1369
Cac8I	GCNNGC	6 cut(s)	235, 318, 439, 460, 1180, 1360
CciI	TCATGA	1 cut(s)	648
CfoI	GCGC	5 cut(s)	49, 191, 203, 1019, 1238
Cfr10I	RCCGGY	1 cut(s)	242
Cfr13I	GGNCC	1 cut(s)	245
CseI	GACGC	3 cut(s)	172, 248, 270
Csp6I	GTAC	8 cut(s)	123, 150, 225, 364, 541, 926, 1124, 1517
CviAII	CATG	8 cut(s)	160, 527, 649, 1359, 1543, 1568, 1575, 1640
CviQI	GTAC	8 cut(s)	123, 150, 225, 364, 541, 926, 1124, 1517
DdeI	CTNAG	5 cut(s)	454, 571, 1155, 1557, 1595
DinI	GGCGCC	2 cut(s)	48, 202
DpnI	GATC	3 cut(s)	209, 914, 1647
DpnII	GATC	3 cut(s)	207, 912, 1645
DraI	TTTAAA	1 cut(s)	748
EaeI	YGGCCR	1 cut(s)	532
Eam1104I	CTCTTC	2 cut(s)	1084, 1284
EarI	CTCTTC	2 cut(s)	1084, 1284
EciI	GGCGGA	3 cut(s)	16, 73, 1454
Eco130I	CCWWGG	3 cut(s)	544, 940, 978
Eco31I	GGTCTC	2 cut(s)	826, 1058
Eco47I	GGWCC	1 cut(s)	245
Eco57I	CTGAAG	2 cut(s)	840, 1092
EcoRII	CCWGG	4 cut(s)	39, 1322, 1486, 1501
EcoT14I	CCWWGG	3 cut(s)	544, 940, 978
EcoT22I	ATGCAT	2 cut(s)	1532, 1624
EgeI	GGCGCC	2 cut(s)	48, 202
EheI	GGCGCC	2 cut(s)	48, 202
ErhI	CCWWGG	3 cut(s)	544, 940, 978
FaeI	CATG	8 cut(s)	163, 530, 652, 1362, 1546, 1571, 1578, 1643
FaqI	GGGAC	2 cut(s)	231, 857
FatI	CATG	8 cut(s)	159, 526, 648, 1358, 1542, 1567, 1574, 1639
FauI	CCCGC	4 cut(s)	268, 834, 1320, 1689
FauNDI	CATATG	1 cut(s)	787
FbaI	TGATCA	1 cut(s)	912
Fnu4HI	GCNGC	4 cut(s)	45, 435, 868, 1263
FokI	GGATG	4 cut(s)	67, 104, 961, 1577
Fsp4HI	GCNGC	4 cut(s)	45, 435, 868, 1263
FspBI	CTAG	5 cut(s)	317, 479, 1046, 1119, 1302
GlaI	GCGC	5 cut(s)	48, 190, 202, 1018, 1237
GluI	GCNGC	4 cut(s)	45, 435, 868, 1263
GsuI	CTGGAG	1 cut(s)	1398
HaeII	RGCGCY	4 cut(s)	50, 192, 204, 1020
HaeIII	GGCC	2 cut(s)	141, 534
HapII	CCGG	7 cut(s)	114, 132, 204, 243, 249, 512, 762
HgaI	GACGC	3 cut(s)	172, 248, 270
HhaI	GCGC	5 cut(s)	49, 191, 203, 1019, 1238
Hin1I	GRCGYC	4 cut(s)	47, 183, 201, 240
Hin1II	CATG	8 cut(s)	163, 530, 652, 1362, 1546, 1571, 1578, 1643
Hin6I	GCGC	5 cut(s)	47, 189, 201, 1017, 1236
HinP1I	GCGC	5 cut(s)	47, 189, 201, 1017, 1236
HindIII	AAGCTT	1 cut(s)	451
HinfI	GANTC	7 cut(s)	110, 252, 626, 724, 824, 1380, 1392
HpaII	CCGG	7 cut(s)	114, 132, 204, 243, 249, 512, 762
HphI	GGTGA	2 cut(s)	922, 1591
Hpy166II	GTNNAC	4 cut(s)	366, 640, 1100, 1126
Hpy188I	TCNGA	3 cut(s)	109, 404, 876
Hpy188III	TCNNGA	3 cut(s)	479, 649, 1068
Hpy8I	GTNNAC	4 cut(s)	366, 640, 1100, 1126
Hpy99I	CGWCG	6 cut(s)	35, 55, 188, 218, 233, 242
HpyAV	CCTTC	5 cut(s)	881, 1052, 1116, 1282, 1325
HpyCH4III	ACNGT	7 cut(s)	229, 259, 540, 754, 772, 1525, 1609
HpyCH4IV	ACGT	2 cut(s)	362, 1319
HpyF10VI	GCNNNNNNNGC	9 cut(s)	239, 317, 443, 459, 815, 847, 959, 1442, 1451
HpyF3I	CTNAG	5 cut(s)	454, 571, 1155, 1557, 1595
HpySE526I	ACGT	2 cut(s)	362, 1319
Hsp92I	GRCGYC	4 cut(s)	47, 183, 201, 240
Hsp92II	CATG	8 cut(s)	163, 530, 652, 1362, 1546, 1571, 1578, 1643
HspAI	GCGC	5 cut(s)	47, 189, 201, 1017, 1236
KasI	GGCGCC	2 cut(s)	46, 200
KpnI	GGTACC	2 cut(s)	228, 929
Ksp22I	TGATCA	1 cut(s)	912
Kzo9I	GATC	3 cut(s)	207, 912, 1645
LguI	GCTCTTC	1 cut(s)	1284
LmnI	GCTCC	8 cut(s)	134, 278, 313, 347, 551, 580, 764, 958
Lsp1109I	GCAGC	3 cut(s)	421, 879, 1249
LweI	GCATC	8 cut(s)	126, 790, 940, 955, 1274, 1307, 1539, 1608
MaeI	CTAG	5 cut(s)	317, 479, 1046, 1119, 1302
MaeII	ACGT	2 cut(s)	362, 1319
MaeIII	GTNAC	5 cut(s)	11, 217, 253, 469, 1560
MalI	GATC	3 cut(s)	209, 914, 1647
MboI	GATC	3 cut(s)	207, 912, 1645
MfeI	CAATTG	1 cut(s)	1512
MflI	RGATCY	1 cut(s)	207
MhlI	GDGCHC	2 cut(s)	1456, 1684
MlsI	TGGCCA	1 cut(s)	534
MluCI	AATT	7 cut(s)	474, 579, 718, 811, 935, 1512, 1708
MluNI	TGGCCA	1 cut(s)	534
Mly113I	GGCGCC	2 cut(s)	47, 201
MlyI	GAGTC	4 cut(s)	104, 261, 718, 1389
MmeI	TCCRAC	4 cut(s)	132, 601, 772, 1673
MnlI	CCTC	8 cut(s)	152, 164, 179, 188, 640, 697, 1604, 1651
Mox20I	TGGCCA	1 cut(s)	534
Mph1103I	ATGCAT	2 cut(s)	1532, 1624
MscI	TGGCCA	1 cut(s)	534
MseI	TTAA	6 cut(s)	293, 498, 564, 747, 1004, 1200
MslI	CAYNNNNRTG	2 cut(s)	920, 1424
Msp20I	TGGCCA	1 cut(s)	534
MspA1I	CMGCKG	2 cut(s)	818, 841
MspI	CCGG	7 cut(s)	114, 132, 204, 243, 249, 512, 762
MspR9I	CCNGG	6 cut(s)	41, 205, 249, 1324, 1488, 1503
MunI	CAATTG	1 cut(s)	1512
Mva1269I	GAATGC	1 cut(s)	1182
MvaI	CCWGG	4 cut(s)	41, 1324, 1488, 1503
MvnI	CGCG	1 cut(s)	237
MwoI	GCNNNNNNNGC	9 cut(s)	239, 317, 443, 459, 815, 847, 959, 1442, 1451
NarI	GGCGCC	2 cut(s)	47, 201
NciI	CCSGG	2 cut(s)	205, 249
NdeI	CATATG	1 cut(s)	787
NdeII	GATC	3 cut(s)	207, 912, 1645
NheI	GCTAGC	1 cut(s)	316
NlaIII	CATG	8 cut(s)	163, 530, 652, 1362, 1546, 1571, 1578, 1643
NlaIV	GGNNCC	7 cut(s)	48, 202, 226, 247, 927, 1509, 1683
NmeAIII	GCCGAG	2 cut(s)	135, 159
NmuCI	GTSAC	4 cut(s)	11, 217, 253, 469
NsiI	ATGCAT	2 cut(s)	1532, 1624
NspI	RCATGY	3 cut(s)	163, 1362, 1546
PaeI	GCATGC	1 cut(s)	1362
PagI	TCATGA	1 cut(s)	648
PciI	ACATGT	1 cut(s)	1542
PciSI	GCTCTTC	1 cut(s)	1284
PcsI	WCGNNNNNNNCGW	2 cut(s)	368, 678
PctI	GAATGC	1 cut(s)	1182
PfeI	GAWTC	3 cut(s)	626, 824, 1392
PfoI	TCCNGGA	1 cut(s)	247
PkrI	GCNGC	4 cut(s)	46, 436, 869, 1264
PleI	GAGTC	4 cut(s)	104, 260, 718, 1388
PluTI	GGCGCC	2 cut(s)	50, 204
PpsI	GAGTC	4 cut(s)	104, 260, 718, 1388
Ppu21I	YACGTR	1 cut(s)	363
PscI	ACATGT	1 cut(s)	1542
PshAI	GACNNNNGTC	1 cut(s)	243
Psp6I	CCWGG	4 cut(s)	39, 1322, 1486, 1501
PspGI	CCWGG	4 cut(s)	39, 1322, 1486, 1501
PspN4I	GGNNCC	7 cut(s)	48, 202, 226, 247, 927, 1509, 1683
PspPI	GGNCC	1 cut(s)	245
PsrI	GAACNNNNNNTAC	2 cut(s)	356, 388
PstI	CTGCAG	1 cut(s)	1657
PsuI	RGATCY	1 cut(s)	207
PvuII	CAGCTG	1 cut(s)	818
RsaI	GTAC	8 cut(s)	124, 151, 226, 365, 542, 927, 1125, 1518
RsaNI	GTAC	8 cut(s)	123, 150, 225, 364, 541, 926, 1124, 1517
RseI	CAYNNNNRTG	2 cut(s)	920, 1424
SapI	GCTCTTC	1 cut(s)	1284
SaqAI	TTAA	6 cut(s)	293, 498, 564, 747, 1004, 1200
SatI	GCNGC	4 cut(s)	45, 435, 868, 1263
Sau3AI	GATC	3 cut(s)	207, 912, 1645
Sau96I	GGNCC	1 cut(s)	245
SchI	GAGTC	4 cut(s)	104, 261, 718, 1389
ScrFI	CCNGG	6 cut(s)	41, 205, 249, 1324, 1488, 1503
SduI	GDGCHC	2 cut(s)	1456, 1684
SfaNI	GCATC	8 cut(s)	126, 790, 940, 955, 1274, 1307, 1539, 1608
SfcI	CTRYAG	3 cut(s)	600, 1387, 1653
SfoI	GGCGCC	2 cut(s)	48, 202
SinI	GGWCC	1 cut(s)	245
SmiMI	CAYNNNNRTG	2 cut(s)	920, 1424
SphI	GCATGC	1 cut(s)	1362
Sse9I	AATT	7 cut(s)	474, 579, 718, 811, 935, 1512, 1708
SsiI	CCGC	9 cut(s)	27, 44, 84, 275, 311, 841, 1327, 1465, 1696
SspDI	GGCGCC	2 cut(s)	46, 200
SspMI	CTAG	5 cut(s)	317, 479, 1046, 1119, 1302
StyD4I	CCNGG	6 cut(s)	39, 203, 247, 1322, 1486, 1501
StyI	CCWWGG	3 cut(s)	544, 940, 978
TaaI	ACNGT	7 cut(s)	229, 259, 540, 754, 772, 1525, 1609
TaiI	ACGT	2 cut(s)	365, 1322
TaqI	TCGA	2 cut(s)	448, 1069
TasI	AATT	7 cut(s)	474, 579, 718, 811, 935, 1512, 1708
TatI	WGTACW	1 cut(s)	1123
TauI	GCSGC	1 cut(s)	47
TfiI	GAWTC	3 cut(s)	626, 824, 1392
Tru1I	TTAA	6 cut(s)	293, 498, 564, 747, 1004, 1200
Tru9I	TTAA	6 cut(s)	293, 498, 564, 747, 1004, 1200
TscAI	CASTG	6 cut(s)	226, 262, 922, 1015, 1116, 1369
TseFI	GTSAC	4 cut(s)	11, 217, 253, 469
TseI	GCWGC	3 cut(s)	434, 867, 1262
Tsp45I	GTSAC	4 cut(s)	11, 217, 253, 469
TspDTI	ATGAA	6 cut(s)	256, 637, 1139, 1339, 1392, 1584
TspGWI	ACGGA	3 cut(s)	34, 110, 137
TspRI	CASTG	6 cut(s)	226, 262, 922, 1015, 1116, 1369
VpaK11BI	GGWCC	1 cut(s)	245
XapI	RAATTY	1 cut(s)	935
XbaI	TCTAGA	1 cut(s)	478
XceI	RCATGY	3 cut(s)	163, 1362, 1546
XcmI	CCANNNNNNNNNTGG	1 cut(s)	542
XspI	CTAG	5 cut(s)	317, 479, 1046, 1119, 1302
Zsp2I	ATGCAT	2 cut(s)	1532, 1624

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.