Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006865

Physical Location & Seq

Genomic Coordinates Forward (+)

27441529 .. 27445461

Gene Structure 3933 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028752

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGGAGGAGGTCAGAGACGGACTTCCGCCGACGACCAGGCGGCGCCGTCGTCGTCTTCAATCTGGTCGCATTTCTGGTCTTCCGCTACCAGAACCAAGCCCTTATCCGACTCCGGCATCCGAACCAGCTCCGGCGATGGCCTCGTCCGTACCCTCGGCATGTTTGACCTCATACTCCTCGGCGTCGGCGCTTCCATCGGCGCCGGGATTTTCGTGGTCACTGGCACCGTCGCACGCGACGCCGGTCCCGGAGTGACTGTTAGTTTCATTCTTGCTGGGGCGTCTTGTGTGTTAAACGCGCTCTGTTATGCGGAGCTAGCTTCTCGTTTTCCTGCCGTTGTTGGTGGAGCGTACCTTTACACGTACACGGCGTTCAATGAGCTGACTGCTTTCCTTGTTTTCGGACAACTTATGCTTGACTATCATATTGGGGCTGCCAGCATAGCTCGAAGCTTAGCAAGCTATGTAGTGACAATTCTAGAGCTTTTCCCAATTTTTAAGGAAAACATACCGGACTGGATTGGACATGGTGGCCAACAGTACCTTGGGGGAGCTATATCACTTAATCTCTTAGCTCCAATTCTCCTTGCACTTCTAACTATAGTTCTCTGTCGGGGTGTTGGAGAATCCTCTGCTGTAAACTCATTCATGACTGCTACAAAGATTATCATCGTTCTTATCGTCATCTTCGTTGGTGCTTTTGAGGTTGATGTTTCAAATTGGACTCCCTTTGCCCCAAATGGTTTTAAAACAGTATTGACTGGAGCAACTGTTGTATTCTTTGCATATGTTGGATTTGATGCAGTTGCTAATTCAGCTGAAGAATCAAAGAGACCACAGCGGGACTTGCCAATAGGGATCATAGGCAGCCTTCTGATATGTGTTATATTGTATATCGGTGTCTGTTTGGTGATCACTGGAATGGTACCATATAAATTCCTTGGGGAAGATGCTCCTTTGGCTGATGCTTTTACATCCAAGGGGTTGAAATTTGTTGCCATCTTAATCAGTGTGGGTGCTGTTGCTGGACTTACGACTACCCTTCTAGTTGGTCTGTATGTTCAGTCTCGATTATATCTTGGGCTTGGAAGAGATGGTTTACTACCTTCACTGTTTGCTAGAGTACACGCAAGACGCCGAACTCCCATTCATTCTCAGGTGTGGGTTGGTATTGTTGCTGGCATTCTGGCAGGGTTGTTTAATGTGCATATTCTCTCGCACATCCTTTCAGTTGGCGCATTGACAGGCTACTCTGTTGTTGCTGCATCTGTGGTTGCTCTTCGTTTGAAGGATAAGGCATCAAGTCACGTGTCATCTACGTCCTGGCGGGAAGGTGTCATCTGCTTATTCATAGTTGCATGCAGTGGTTTTAGTGCTGGAGTCTTCTACAGATTCAACACTTCATTTATTTTTATGGTCATAGCTGTGATTGTGGCAATACTTGCTTCGTGTGCTCTTTGTTTCCGCCAAACTTATGCAGATATGCCAGGGTTTTTGTGTCCTGGGGTTCCAATTGTGCCAACTGTATGCATCTTCTTCAACATGTTTCTATTTGCTCAGTTACACCATGAAGCATGGGTGAGATTTGTCATCCTCAGCATCATTTCAGTTGGTATTTATGCATTTTATGGACGATACCATGCTGATCCAACTGCAGAGGAGACTATCATTTATCATAGGGCACCAGAAGACTTGCGGTCGGACGCTGCAGCAGCAACAGTGGAAATGCTCTCAACAACTGAAATTCCCTCGACTGAAAGTCCCAAATCTACTTCTGTTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016020 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

595

Amino Acids

63.18

Weight (kDa)

7.16

Isoelectric Point (pI)

34.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	52 - 429	2.1e-49	Amino acid permease
AA_permease	PF00324	57 - 457	8.9e-33	Amino acid permease
AA_permease_C	PF13906	498 - 547	1.9e-16	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05940 AT1G05940 AT1G05940
fragaria_vesca	FvH4_7g09870 FvH4_7g09870 FvH4_7g09870 FvH4_7g09870 FvH4_7g09870
malus_domestica	MD07G1104100.v1.1
prunus_persica	Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1 Prupe.2G127800_v2.0.a1
pyrus_communis	pycom07g08920
rosa_chinensis	RchiOBHm_Chr1g0347411
rosa_laevigata	RLG00000028752
rosa_multiflora	Rmu_sc0009756.1_g000002 Rmu_sc0042207.1_g000001
rosa_roxburghii	Rroxscaffold_4G00307840
rosa_rugosa	Rorug01G0186600 Rorug01G0186700
rosa_samantha	Rh1BG169900 Rh1CG189300 Rh1DG200300
rosa_wichuraiana	Rw1G017130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	925
AccB1I	GGYRCC	5 cut(s)	43, 200, 224, 925, 1681
AccII	CGCG	2 cut(s)	237, 299
AciI	CCGC	8 cut(s)	27, 41, 84, 311, 841, 1327, 1465, 1696
AclWI	GGATC	2 cut(s)	866, 1640
AcoI	YGGCCR	1 cut(s)	532
AcsI	RAATTY	3 cut(s)	935, 989, 1743
AcuI	CTGAAG	1 cut(s)	840
AcvI	CACGTG	1 cut(s)	1309
AcyI	GRCGYC	6 cut(s)	44, 183, 201, 240, 281, 1135
AfaI	GTAC	6 cut(s)	151, 353, 365, 542, 927, 1125
AflIII	ACRYGT	3 cut(s)	360, 1308, 1542
AgsI	TTSAA	7 cut(s)	60, 376, 717, 988, 1288, 1396, 1540
AhdI	GACNNNNNGTC	2 cut(s)	1696, 1758
AjnI	CCWGG	4 cut(s)	36, 1322, 1486, 1501
Alw21I	GWGCWC	1 cut(s)	1456
Alw26I	GTCTC	4 cut(s)	10, 826, 1071, 1655
AlwI	GGATC	2 cut(s)	866, 1640
AoxI	GGCC	2 cut(s)	139, 532
ApeKI	GCWGC	6 cut(s)	434, 867, 1262, 1706, 1709, 1712
ApoI	RAATTY	3 cut(s)	935, 989, 1743
Asp718I	GGTACC	1 cut(s)	925
AspLEI	GCGC	5 cut(s)	46, 191, 203, 301, 1238
AspS9I	GGNCC	1 cut(s)	245
AsuC2I	CCSGG	2 cut(s)	205, 249
AsuHPI	GGTGA	2 cut(s)	922, 1591
AsuNHI	GCTAGC	1 cut(s)	316
AvaII	GGWCC	1 cut(s)	245
BaeGI	GKGCMC	1 cut(s)	1684
BalI	TGGCCA	1 cut(s)	534
BanI	GGYRCC	5 cut(s)	43, 200, 224, 925, 1681
BbrPI	CACGTG	1 cut(s)	1309
BbsI	GAAGAC	4 cut(s)	48, 72, 1375, 1695
Bbv12I	GWGCWC	1 cut(s)	1456
BbvCI	CCTCAGC	1 cut(s)	1595
BbvI	GCAGC	6 cut(s)	421, 879, 1249, 1693, 1721, 1724
BccI	CCATC	4 cut(s)	131, 203, 1007, 1088
BceAI	ACGGC	3 cut(s)	31, 320, 384
BciT130I	CCWGG	4 cut(s)	38, 1324, 1488, 1503
BclI	TGATCA	1 cut(s)	912
BcnI	CCSGG	2 cut(s)	205, 249
BcoDI	GTCTC	4 cut(s)	10, 826, 1071, 1655
BfaI	CTAG	4 cut(s)	317, 479, 1046, 1119
BfmI	CTRYAG	4 cut(s)	600, 1387, 1653, 1707
BfoI	RGCGCY	3 cut(s)	47, 192, 204
BisI	GCNGC	7 cut(s)	42, 435, 868, 1263, 1707, 1710, 1713
BlpI	GCTNAGC	1 cut(s)	454
BlsI	GCNGC	7 cut(s)	43, 436, 869, 1264, 1708, 1711, 1714
Bme1390I	CCNGG	6 cut(s)	38, 205, 249, 1324, 1488, 1503
Bme18I	GGWCC	1 cut(s)	245
BmeRI	GACNNNNNGTC	2 cut(s)	1696, 1758
BmgT120I	GGNCC	1 cut(s)	245
BmiI	GGNNCC	7 cut(s)	45, 202, 226, 247, 927, 1509, 1683
BmrFI	CCNGG	6 cut(s)	38, 205, 249, 1324, 1488, 1503
BmsI	GCATC	8 cut(s)	126, 790, 940, 955, 1274, 1307, 1539, 1608
BmtI	GCTAGC	1 cut(s)	320
BoxI	GACNNNNGTC	1 cut(s)	243
BpiI	GAAGAC	4 cut(s)	48, 72, 1375, 1695
BpmI	CTGGAG	2 cut(s)	783, 1398
Bpu10I	CCTNAGC	1 cut(s)	1595
Bpu1102I	GCTNAGC	1 cut(s)	454
BpuMI	CCSGG	2 cut(s)	205, 249
BsaAI	YACGTR	2 cut(s)	363, 1309
BsaBI	GATNNNNATC	1 cut(s)	668
BsaHI	GRCGYC	6 cut(s)	44, 183, 201, 240, 281, 1135
BsaI	GGTCTC	1 cut(s)	826
BsaJI	CCNNGG	7 cut(s)	154, 178, 544, 940, 978, 1487, 1502
BsaWI	WCCGGW	1 cut(s)	511
BsaXI	ACNNNNNCTCC	4 cut(s)	243, 273, 756, 786
Bse118I	RCCGGY	1 cut(s)	242
Bse1I	ACTGG	4 cut(s)	226, 521, 766, 922
Bse8I	GATNNNNATC	1 cut(s)	668
BseBI	CCWGG	4 cut(s)	38, 1324, 1488, 1503
BseDI	CCNNGG	7 cut(s)	154, 178, 544, 940, 978, 1487, 1502
BseGI	GGATG	4 cut(s)	117, 974, 1221, 1590
BseJI	GATNNNNATC	1 cut(s)	668
BseMII	CTCAG	3 cut(s)	1169, 1571, 1609
BseNI	ACTGG	4 cut(s)	226, 521, 766, 922
BseRI	GAGGAG	3 cut(s)	21, 167, 1673
BseSI	GKGCMC	1 cut(s)	1684
BseXI	GCAGC	6 cut(s)	421, 879, 1249, 1693, 1721, 1724
BseYI	CCCAGC	1 cut(s)	275
Bsh1236I	CGCG	2 cut(s)	237, 299
Bsh1285I	CGRYCG	1 cut(s)	1700
BshFI	GGCC	2 cut(s)	141, 534
BshNI	GGYRCC	5 cut(s)	43, 200, 224, 925, 1681
BsiEI	CGRYCG	1 cut(s)	1700
BsiHKAI	GWGCWC	1 cut(s)	1456
BsiSI	CCGG	6 cut(s)	114, 132, 204, 243, 249, 512
BslFI	GGGAC	3 cut(s)	231, 857, 1746
BsmAI	GTCTC	4 cut(s)	10, 826, 1071, 1655
BsmBI	CGTCTC	1 cut(s)	10
BsmFI	GGGAC	3 cut(s)	231, 857, 1746
BsmI	GAATGC	1 cut(s)	1182
BsnI	GGCC	2 cut(s)	141, 534
Bso31I	GGTCTC	1 cut(s)	826
Bsp1286I	GDGCHC	2 cut(s)	1456, 1684
Bsp143I	GATC	3 cut(s)	858, 912, 1645
Bsp1720I	GCTNAGC	1 cut(s)	454
BspACI	CCGC	8 cut(s)	27, 41, 84, 311, 841, 1327, 1465, 1696
BspANI	GGCC	2 cut(s)	141, 534
BspCNI	CTCAG	3 cut(s)	1168, 1570, 1608
BspFNI	CGCG	2 cut(s)	237, 299
BspHI	TCATGA	1 cut(s)	648
BspLI	GGNNCC	7 cut(s)	45, 202, 226, 247, 927, 1509, 1683
BspMAI	CTGCAG	2 cut(s)	1657, 1711
BspOI	GCTAGC	1 cut(s)	320
BspPI	GGATC	2 cut(s)	866, 1640
BspQI	GCTCTTC	1 cut(s)	1284
BspT107I	GGYRCC	5 cut(s)	43, 200, 224, 925, 1681
BspTNI	GGTCTC	1 cut(s)	826
BsrFI	RCCGGY	1 cut(s)	242
BsrI	ACTGG	4 cut(s)	226, 521, 766, 922
BssAI	RCCGGY	1 cut(s)	242
BssECI	CCNNGG	7 cut(s)	154, 178, 544, 940, 978, 1487, 1502
BssMI	GATC	3 cut(s)	858, 912, 1645
BssNI	GRCGYC	6 cut(s)	44, 183, 201, 240, 281, 1135
BssT1I	CCWWGG	3 cut(s)	544, 940, 978
Bst2UI	CCWGG	4 cut(s)	38, 1324, 1488, 1503
Bst4CI	ACNGT	8 cut(s)	229, 259, 540, 754, 772, 1113, 1525, 1720
Bst6I	CTCTTC	2 cut(s)	1084, 1284
BstACI	GRCGYC	6 cut(s)	44, 183, 201, 240, 281, 1135
BstAPI	GCANNNNNTGC	1 cut(s)	1442
BstBAI	YACGTR	2 cut(s)	363, 1309
BstC8I	GCNNGC	6 cut(s)	235, 318, 439, 460, 1180, 1360
BstDEI	CTNAG	5 cut(s)	454, 571, 1155, 1557, 1595
BstF5I	GGATG	4 cut(s)	117, 974, 1221, 1590
BstFNI	CGCG	2 cut(s)	237, 299
BstH2I	RGCGCY	3 cut(s)	47, 192, 204
BstHHI	GCGC	5 cut(s)	46, 191, 203, 301, 1238
BstKTI	GATC	3 cut(s)	861, 915, 1648
BstMAI	GTCTC	4 cut(s)	10, 826, 1071, 1655
BstMBI	GATC	3 cut(s)	858, 912, 1645
BstMCI	CGRYCG	1 cut(s)	1700
BstNI	CCWGG	4 cut(s)	38, 1324, 1488, 1503
BstNSI	RCATGY	3 cut(s)	163, 1362, 1546
BstPAI	GACNNNNGTC	1 cut(s)	243
BstSCI	CCNGG	6 cut(s)	36, 203, 247, 1322, 1486, 1501
BstSFI	CTRYAG	4 cut(s)	600, 1387, 1653, 1707
BstSLI	GKGCMC	1 cut(s)	1684
BstUI	CGCG	2 cut(s)	237, 299
BstV1I	GCAGC	6 cut(s)	421, 879, 1249, 1693, 1721, 1724
BstV2I	GAAGAC	4 cut(s)	48, 72, 1375, 1695
BsuRI	GGCC	2 cut(s)	141, 534
BtgZI	GCGATG	1 cut(s)	150
BtsCI	GGATG	4 cut(s)	117, 974, 1221, 1590
BtsI	GCAGTG	1 cut(s)	1369
BtsIMutI	CAGTG	6 cut(s)	219, 915, 1015, 1109, 1369, 1725
Cac8I	GCNNGC	6 cut(s)	235, 318, 439, 460, 1180, 1360
CciI	TCATGA	1 cut(s)	648
CfoI	GCGC	5 cut(s)	46, 191, 203, 301, 1238
Cfr10I	RCCGGY	1 cut(s)	242
Cfr13I	GGNCC	1 cut(s)	245
CseI	GACGC	5 cut(s)	172, 248, 270, 1143, 1712
Csp6I	GTAC	6 cut(s)	150, 352, 364, 541, 926, 1124
CviAII	CATG	8 cut(s)	160, 527, 649, 1359, 1543, 1568, 1575, 1640
CviQI	GTAC	6 cut(s)	150, 352, 364, 541, 926, 1124
DdeI	CTNAG	5 cut(s)	454, 571, 1155, 1557, 1595
DinI	GGCGCC	2 cut(s)	45, 202
DpnI	GATC	3 cut(s)	860, 914, 1647
DpnII	GATC	3 cut(s)	858, 912, 1645
DraI	TTTAAA	1 cut(s)	748
DriI	GACNNNNNGTC	2 cut(s)	1696, 1758
EaeI	YGGCCR	1 cut(s)	532
Eam1104I	CTCTTC	2 cut(s)	1084, 1284
Eam1105I	GACNNNNNGTC	2 cut(s)	1696, 1758
EarI	CTCTTC	2 cut(s)	1084, 1284
EciI	GGCGGA	2 cut(s)	16, 1454
Eco130I	CCWWGG	3 cut(s)	544, 940, 978
Eco31I	GGTCTC	1 cut(s)	826
Eco47I	GGWCC	1 cut(s)	245
Eco57I	CTGAAG	1 cut(s)	840
Eco72I	CACGTG	1 cut(s)	1309
EcoRII	CCWGG	4 cut(s)	36, 1322, 1486, 1501
EcoT14I	CCWWGG	3 cut(s)	544, 940, 978
EcoT22I	ATGCAT	2 cut(s)	1532, 1624
EgeI	GGCGCC	2 cut(s)	45, 202
EheI	GGCGCC	2 cut(s)	45, 202
ErhI	CCWWGG	3 cut(s)	544, 940, 978
Esp3I	CGTCTC	1 cut(s)	10
FaeI	CATG	8 cut(s)	163, 530, 652, 1362, 1546, 1571, 1578, 1643
FaqI	GGGAC	3 cut(s)	231, 857, 1746
FatI	CATG	8 cut(s)	159, 526, 648, 1358, 1542, 1567, 1574, 1639
FauI	CCCGC	2 cut(s)	834, 1320
FauNDI	CATATG	1 cut(s)	787
FbaI	TGATCA	1 cut(s)	912
Fnu4HI	GCNGC	7 cut(s)	42, 435, 868, 1263, 1707, 1710, 1713
FokI	GGATG	4 cut(s)	104, 961, 1208, 1577
Fsp4HI	GCNGC	7 cut(s)	42, 435, 868, 1263, 1707, 1710, 1713
FspBI	CTAG	4 cut(s)	317, 479, 1046, 1119
GlaI	GCGC	5 cut(s)	45, 190, 202, 300, 1237
GluI	GCNGC	7 cut(s)	42, 435, 868, 1263, 1707, 1710, 1713
GsaI	CCCAGC	1 cut(s)	279
GsuI	CTGGAG	2 cut(s)	783, 1398
HaeII	RGCGCY	3 cut(s)	47, 192, 204
HaeIII	GGCC	2 cut(s)	141, 534
HapII	CCGG	6 cut(s)	114, 132, 204, 243, 249, 512
HgaI	GACGC	5 cut(s)	172, 248, 270, 1143, 1712
HhaI	GCGC	5 cut(s)	46, 191, 203, 301, 1238
Hin1I	GRCGYC	6 cut(s)	44, 183, 201, 240, 281, 1135
Hin1II	CATG	8 cut(s)	163, 530, 652, 1362, 1546, 1571, 1578, 1643
Hin6I	GCGC	5 cut(s)	44, 189, 201, 299, 1236
HinP1I	GCGC	5 cut(s)	44, 189, 201, 299, 1236
HindIII	AAGCTT	1 cut(s)	451
HinfI	GANTC	6 cut(s)	110, 626, 724, 824, 1380, 1392
HpaII	CCGG	6 cut(s)	114, 132, 204, 243, 249, 512
HphI	GGTGA	2 cut(s)	922, 1591
Hpy166II	GTNNAC	4 cut(s)	366, 640, 1100, 1126
Hpy188I	TCNGA	6 cut(s)	15, 109, 122, 404, 876, 1702
Hpy188III	TCNNGA	3 cut(s)	479, 649, 1068
Hpy8I	GTNNAC	4 cut(s)	366, 640, 1100, 1126
Hpy99I	CGWCG	6 cut(s)	35, 52, 55, 188, 233, 242
HpyAV	CCTTC	5 cut(s)	881, 1052, 1116, 1282, 1325
HpyCH4III	ACNGT	8 cut(s)	229, 259, 540, 754, 772, 1113, 1525, 1720
HpyCH4IV	ACGT	3 cut(s)	362, 1308, 1319
HpyF3I	CTNAG	5 cut(s)	454, 571, 1155, 1557, 1595
HpySE526I	ACGT	3 cut(s)	362, 1308, 1319
Hsp92I	GRCGYC	6 cut(s)	44, 183, 201, 240, 281, 1135
Hsp92II	CATG	8 cut(s)	163, 530, 652, 1362, 1546, 1571, 1578, 1643
HspAI	GCGC	5 cut(s)	44, 189, 201, 299, 1236
KasI	GGCGCC	2 cut(s)	43, 200
KpnI	GGTACC	1 cut(s)	929
Ksp22I	TGATCA	1 cut(s)	912
Kzo9I	GATC	3 cut(s)	858, 912, 1645
LguI	GCTCTTC	1 cut(s)	1284
LmnI	GCTCC	7 cut(s)	134, 313, 347, 551, 580, 764, 958
Lsp1109I	GCAGC	6 cut(s)	421, 879, 1249, 1693, 1721, 1724
LweI	GCATC	8 cut(s)	126, 790, 940, 955, 1274, 1307, 1539, 1608
MaeI	CTAG	4 cut(s)	317, 479, 1046, 1119
MaeII	ACGT	3 cut(s)	362, 1308, 1319
MaeIII	GTNAC	5 cut(s)	217, 253, 469, 1304, 1560
MalI	GATC	3 cut(s)	860, 914, 1647
MboI	GATC	3 cut(s)	858, 912, 1645
MfeI	CAATTG	1 cut(s)	1512
MhlI	GDGCHC	2 cut(s)	1456, 1684
MlsI	TGGCCA	1 cut(s)	534
MluCI	AATT	9 cut(s)	474, 492, 579, 718, 811, 935, 989, 1512, 1743
MluNI	TGGCCA	1 cut(s)	534
Mly113I	GGCGCC	2 cut(s)	44, 201
MlyI	GAGTC	3 cut(s)	104, 718, 1389
MmeI	TCCRAC	5 cut(s)	132, 601, 772, 1673, 1680
MnlI	CCTC	9 cut(s)	152, 164, 179, 188, 640, 697, 1604, 1651, 1759
Mox20I	TGGCCA	1 cut(s)	534
Mph1103I	ATGCAT	2 cut(s)	1532, 1624
MscI	TGGCCA	1 cut(s)	534
MseI	TTAA	6 cut(s)	293, 498, 564, 747, 1004, 1200
MslI	CAYNNNNRTG	2 cut(s)	920, 1424
Msp20I	TGGCCA	1 cut(s)	534
MspA1I	CMGCKG	2 cut(s)	818, 841
MspI	CCGG	6 cut(s)	114, 132, 204, 243, 249, 512
MspR9I	CCNGG	6 cut(s)	38, 205, 249, 1324, 1488, 1503
MunI	CAATTG	1 cut(s)	1512
Mva1269I	GAATGC	1 cut(s)	1182
MvaI	CCWGG	4 cut(s)	38, 1324, 1488, 1503
MvnI	CGCG	2 cut(s)	237, 299
NarI	GGCGCC	2 cut(s)	44, 201
NciI	CCSGG	2 cut(s)	205, 249
NdeI	CATATG	1 cut(s)	787
NdeII	GATC	3 cut(s)	858, 912, 1645
NheI	GCTAGC	1 cut(s)	316
NlaIII	CATG	8 cut(s)	163, 530, 652, 1362, 1546, 1571, 1578, 1643
NlaIV	GGNNCC	7 cut(s)	45, 202, 226, 247, 927, 1509, 1683
NmeAIII	GCCGAG	2 cut(s)	135, 159
NmuCI	GTSAC	4 cut(s)	217, 253, 469, 1304
NsiI	ATGCAT	2 cut(s)	1532, 1624
NspI	RCATGY	3 cut(s)	163, 1362, 1546
PaeI	GCATGC	1 cut(s)	1362
PagI	TCATGA	1 cut(s)	648
PciI	ACATGT	1 cut(s)	1542
PciSI	GCTCTTC	1 cut(s)	1284
PcsI	WCGNNNNNNNCGW	3 cut(s)	368, 678, 687
PctI	GAATGC	1 cut(s)	1182
PfeI	GAWTC	3 cut(s)	626, 824, 1392
PfoI	TCCNGGA	1 cut(s)	247
PkrI	GCNGC	7 cut(s)	43, 436, 869, 1264, 1708, 1711, 1714
PleI	GAGTC	3 cut(s)	104, 718, 1388
PluTI	GGCGCC	2 cut(s)	47, 204
PmaCI	CACGTG	1 cut(s)	1309
PmlI	CACGTG	1 cut(s)	1309
PpsI	GAGTC	3 cut(s)	104, 718, 1388
Ppu21I	YACGTR	2 cut(s)	363, 1309
PscI	ACATGT	1 cut(s)	1542
PshAI	GACNNNNGTC	1 cut(s)	243
Psp6I	CCWGG	4 cut(s)	36, 1322, 1486, 1501
PspCI	CACGTG	1 cut(s)	1309
PspFI	CCCAGC	1 cut(s)	275
PspGI	CCWGG	4 cut(s)	36, 1322, 1486, 1501
PspN4I	GGNNCC	7 cut(s)	45, 202, 226, 247, 927, 1509, 1683
PspPI	GGNCC	1 cut(s)	245
PsrI	GAACNNNNNNTAC	2 cut(s)	356, 388
PstI	CTGCAG	2 cut(s)	1657, 1711
PvuII	CAGCTG	1 cut(s)	818
RsaI	GTAC	6 cut(s)	151, 353, 365, 542, 927, 1125
RsaNI	GTAC	6 cut(s)	150, 352, 364, 541, 926, 1124
RseI	CAYNNNNRTG	2 cut(s)	920, 1424
SapI	GCTCTTC	1 cut(s)	1284
SaqAI	TTAA	6 cut(s)	293, 498, 564, 747, 1004, 1200
SatI	GCNGC	7 cut(s)	42, 435, 868, 1263, 1707, 1710, 1713
Sau3AI	GATC	3 cut(s)	858, 912, 1645
Sau96I	GGNCC	1 cut(s)	245
SchI	GAGTC	3 cut(s)	104, 718, 1389
ScrFI	CCNGG	6 cut(s)	38, 205, 249, 1324, 1488, 1503
SduI	GDGCHC	2 cut(s)	1456, 1684
SfaNI	GCATC	8 cut(s)	126, 790, 940, 955, 1274, 1307, 1539, 1608
SfcI	CTRYAG	4 cut(s)	600, 1387, 1653, 1707
SfoI	GGCGCC	2 cut(s)	45, 202
SinI	GGWCC	1 cut(s)	245
SmiMI	CAYNNNNRTG	2 cut(s)	920, 1424
SphI	GCATGC	1 cut(s)	1362
Sse9I	AATT	9 cut(s)	474, 492, 579, 718, 811, 935, 989, 1512, 1743
SsiI	CCGC	8 cut(s)	27, 41, 84, 311, 841, 1327, 1465, 1696
SspDI	GGCGCC	2 cut(s)	43, 200
SspMI	CTAG	4 cut(s)	317, 479, 1046, 1119
StyD4I	CCNGG	6 cut(s)	36, 203, 247, 1322, 1486, 1501
StyI	CCWWGG	3 cut(s)	544, 940, 978
TaaI	ACNGT	8 cut(s)	229, 259, 540, 754, 772, 1113, 1525, 1720
TaiI	ACGT	3 cut(s)	365, 1311, 1322
TaqI	TCGA	3 cut(s)	448, 1069, 1751
TasI	AATT	9 cut(s)	474, 492, 579, 718, 811, 935, 989, 1512, 1743
TatI	WGTACW	1 cut(s)	1123
TauI	GCSGC	1 cut(s)	44
TfiI	GAWTC	3 cut(s)	626, 824, 1392
Tru1I	TTAA	6 cut(s)	293, 498, 564, 747, 1004, 1200
Tru9I	TTAA	6 cut(s)	293, 498, 564, 747, 1004, 1200
TscAI	CASTG	6 cut(s)	226, 922, 1015, 1116, 1369, 1725
TseFI	GTSAC	4 cut(s)	217, 253, 469, 1304
TseI	GCWGC	6 cut(s)	434, 867, 1262, 1706, 1709, 1712
Tsp45I	GTSAC	4 cut(s)	217, 253, 469, 1304
TspDTI	ATGAA	6 cut(s)	256, 637, 1139, 1339, 1392, 1584
TspGWI	ACGGA	2 cut(s)	34, 137
TspRI	CASTG	6 cut(s)	226, 922, 1015, 1116, 1369, 1725
VpaK11BI	GGWCC	1 cut(s)	245
XapI	RAATTY	3 cut(s)	935, 989, 1743
XbaI	TCTAGA	1 cut(s)	478
XceI	RCATGY	3 cut(s)	163, 1362, 1546
XcmI	CCANNNNNNNNNTGG	1 cut(s)	542
XspI	CTAG	4 cut(s)	317, 479, 1046, 1119
Zsp2I	ATGCAT	2 cut(s)	1532, 1624

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.