Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0011863

Physical Location & Seq

Genomic Coordinates Reverse (-)

21937053 .. 21938894

Gene Structure 1842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1151000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGAAGATTGAGATGGGTTTAGGAGGAGGGGTTTGGAATGATGAAGATAAGGCCATGGTTGCTGCAGTTTTAGGAACTCGAGCTGTCGATTACTTGATTTCGAGCTCGGTTTCTTCGATTGAGAATTCGTGTATGGGGATAGGGACTGATGAGAATTTGCACAACAAGCTCTCGGATCTTGTGGAGCGCCCGAATGCATCGAATTTTAGCTGGAATTATGCCATTTTCTGGCAGATTTCTAGGTCCAAGTCTGGGGATTGGGTTTTGTGTTGGGGTGATGGTTCTTGTAGAGAGCCTAAGGAAGATGAAGAGTCCGAAACCACGAGGATTCTCGGTCTTAGGGTTGAGGATGGGACCCAGCAAAGGATGAGGAAGATAGTGCTGCAAAAGTTACACAATATGTTTGGGAGCTCGGATGAGTATAATGGTGCGCTTGGATTAGACCGGGTCACTGATATGGAGATGTTCTTGCTTGCGTCGATGTATTTTTCATTTCCAAGAGGAGAAGGGGGTCCTGGCAAGTGCTTGGCATCTGGGAAGCATGTCTGGCTCTTGGACTTGTTGAAATCAGGGTCGGAGTATTGTGTTCGATCGTTTCTTGCCGAGTCTGCTGGAATTCAGACCATTGTTTTAGTCCCAACAGATGTTGGTGTAGTTGAATTGGGTTCAGTGAGATGCATAGGGGAGCGATTGGAGTTGTTGCAGTCCATAAGGTCACTGTTTTCTACACAGTCCTCGCTCTTGAGGGCCAAGCCAGTGGCAGGTGTGCCGGTGATTGGAAGGAGGATAGATGAAAATGTCCAACTAACTAATTTGAGCCCTGTGGAGAGAGGGGAAGTAGTTCCCAAGATTTTCGGGCAAGATTTGAACTCGGGGAACTCAGTCCGGCCTCGTTATAGAGAAAAACTTGCTGTTAGAAAGTTGGAGGAGAGGTCGTGCGATGTGTACTCAAATCGAAATAGGATTGCATTTTCAAGTCCCCGAAATGGTATTCATGGTTCAAGTTGGCCGAATATTCATGATGTGAAACATGGGAGCCCAATTGAGATGTATGTTTCTCAAAGTCCGGTGAATAATTTACAGGAGCTTGTCAACGGGGGCAGGGATGATTTTTGTCATAACCTTTATCATCCACAGAAGCAGGTGCCAATGCAAATTGACTTTTCAGGGGCCACCTCAAGGCCTTCTGTGGTTTCCCGACCCATTGTTGTGGATTCTGAAAATTCAGATGCTGAAGCTCCATGCAAGGAAGACCAGCCAGGCACAGCTGATGAAAGGAGGCCGCGGAAAAGGGGTAGGAAGCCTGCAAATGGAAGAGAAGAACCACTCAATCATGTGGAGGCAGAGAGGCAGCGGCGTGAGAAGCTAAACCAGCGGTTTTATGCTTTAAGAGCTGTTGTTCCCAATATATCCAAGATGGACAAAGCATCCTTGTTGGGAGATGCCATTGCTTACATCAACGAGCTCCAGGCGAAGCTTAAAGTCATGGAAGCAGAGAGGGAGAACCTCGGTGGCACTTCAAGAGATGTGTCAGCTTTGGGGGCTAACTCAGGTATGGAAATTCAGAACCAGGCACCTGATGTTGATGTTCAAGCTGTTAACGATGAGGTTATCGTAAGGGTGACCTGCCCTTTGGATTCACACCCTGCATCAAGAGTCATCGAAGCATTCAAAGAAGCACAAATCACAGTTGTTGAGTCAAAACTTGCAGCAGCAAACGATACTGTCTCCCATACTTTTGTAGTCAAGTCTCAAGGATCGGAGCAGTTGACGAAGGAGAAGTTGATTGCAGCATTTTCCCGGGAATCCAACTCGCTACAGTCACTGTCATCAGTCGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009892 GO:0010033 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048519 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

614

Amino Acids

67.66

Weight (kDa)

6.0

Isoelectric Point (pI)

49.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	53 - 241	5.2e-53	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	444 - 490	2.3e-12	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	527 - 599	1.1e-07	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011863)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01260 AT1G01260 AT1G01260
fragaria_vesca	FvH4_7g16800
malus_domestica	MD01G1082700.v1.1 MD07G1151000.v1.1
prunus_persica	Prupe.2G190100_v2.0.a1 Prupe.2G190100_v2.0.a1
pyrus_communis	pycom07g14930
rosa_chinensis	RchiOBHm_Chr1g0360001
rosa_laevigata	RLG00000027841
rosa_multiflora	Rmu_ssc0000368.1_g000016
rosa_roxburghii	Rroxscaffold_4G00296560
rosa_rugosa	Rorug01G0274500
rosa_samantha	Rh1AG288300 Rh1BG253800 Rh1CG271300 Rh1DG282900
rosa_wichuraiana	Rw1G025560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	752, 1132
Acc36I	ACCTGC	3 cut(s)	752, 1132, 1634
AccB1I	GGYRCC	2 cut(s)	1144, 1573
AccB7I	CCANNNNNTGG	1 cut(s)	228
AccII	CGCG	1 cut(s)	1285
AciI	CCGC	4 cut(s)	1283, 1285, 1354, 1375
AclWI	GGATC	2 cut(s)	183, 1765
AcoI	YGGCCR	1 cut(s)	1007
AcsI	RAATTY	6 cut(s)	124, 154, 202, 615, 1222, 1560
AcuI	CTGAAG	1 cut(s)	1254
AfaI	GTAC	1 cut(s)	947
AfiI	CCNNNNNNNGG	8 cut(s)	228, 252, 363, 761, 776, 986, 1179, 1310
AgsI	TTSAA	8 cut(s)	565, 659, 868, 975, 1002, 1521, 1592, 1672
AjnI	CCWGG	4 cut(s)	514, 1258, 1467, 1569
Alw21I	GWGCWC	3 cut(s)	107, 413, 1467
Alw26I	GTCTC	2 cut(s)	1732, 1755
AlwI	GGATC	2 cut(s)	183, 1765
AlwNI	CAGNNNCTG	2 cut(s)	1232, 1825
Ama87I	CYCGRG	3 cut(s)	78, 871, 1800
AoxI	GGCC	7 cut(s)	51, 747, 887, 1007, 1170, 1181, 1280
ApeKI	GCWGC	6 cut(s)	62, 382, 1351, 1709, 1712, 1790
ApoI	RAATTY	6 cut(s)	124, 154, 202, 615, 1222, 1560
ArsI	GACNNNNNNTTYG	2 cut(s)	1615, 1647
Asp700I	GAANNNNTTC	1 cut(s)	840
AspLEI	GCGC	2 cut(s)	189, 433
AspS9I	GGNCC	5 cut(s)	243, 354, 512, 747, 1170
AsuC2I	CCSGG	3 cut(s)	446, 1801, 1802
AsuHPI	GGTGA	4 cut(s)	287, 784, 1081, 1633
AvaI	CYCGRG	3 cut(s)	78, 871, 1800
AvaII	GGWCC	3 cut(s)	243, 354, 512
AxyI	CCTNAGG	1 cut(s)	297
BanI	GGYRCC	2 cut(s)	1144, 1573
BanII	GRGCYC	5 cut(s)	107, 413, 821, 1040, 1467
BauI	CACGAG	1 cut(s)	322
BbsI	GAAGAC	1 cut(s)	1257
Bbv12I	GWGCWC	3 cut(s)	107, 413, 1467
BbvI	GCAGC	6 cut(s)	49, 369, 1363, 1721, 1724, 1802
BccI	CCATC	4 cut(s)	7, 272, 344, 1411
BciT130I	CCWGG	4 cut(s)	516, 1260, 1469, 1571
BcnI	CCSGG	3 cut(s)	446, 1801, 1802
BcoDI	GTCTC	2 cut(s)	1732, 1755
BfaI	CTAG	1 cut(s)	240
BfmI	CTRYAG	2 cut(s)	63, 1817
BfoI	RGCGCY	1 cut(s)	190
BfuAI	ACCTGC	3 cut(s)	752, 1132, 1634
BisI	GCNGC	8 cut(s)	63, 383, 1283, 1352, 1355, 1710, 1713, 1791
BlsI	GCNGC	8 cut(s)	64, 384, 1284, 1353, 1356, 1711, 1714, 1792
Bme1390I	CCNGG	7 cut(s)	446, 516, 1260, 1469, 1571, 1801, 1802
Bme18I	GGWCC	3 cut(s)	243, 354, 512
BmeT110I	CYCGRG	3 cut(s)	78, 871, 1800
BmgT120I	GGNCC	5 cut(s)	243, 354, 512, 747, 1170
BmiI	GGNNCC	7 cut(s)	355, 356, 513, 1037, 1146, 1171, 1575
BmrFI	CCNGG	7 cut(s)	446, 516, 1260, 1469, 1571, 1801, 1802
BmsI	GCATC	7 cut(s)	206, 539, 665, 1219, 1432, 1436, 1658
BpiI	GAAGAC	1 cut(s)	1257
BpmI	CTGGAG	1 cut(s)	1451
BpuEI	CTTGAG	3 cut(s)	763, 1162, 1737
BpuMI	CCSGG	3 cut(s)	446, 1801, 1802
BsaJI	CCNNGG	4 cut(s)	54, 1283, 1507, 1800
BsaWI	WCCGGW	1 cut(s)	1066
BsaXI	ACNNNNNCTCC	6 cut(s)	15, 45, 917, 920, 947, 950
Bsc4I	CCNNNNNNNGG	8 cut(s)	228, 252, 363, 761, 776, 986, 1179, 1310
Bse118I	RCCGGY	1 cut(s)	769
Bse1I	ACTGG	1 cut(s)	755
Bse21I	CCTNAGG	1 cut(s)	297
Bse3DI	GCAATG	1 cut(s)	1446
BseBI	CCWGG	4 cut(s)	516, 1260, 1469, 1571
BseDI	CCNNGG	4 cut(s)	54, 1283, 1507, 1800
BseGI	GGATG	6 cut(s)	355, 372, 421, 1111, 1129, 1427
BseLI	CCNNNNNNNGG	8 cut(s)	228, 252, 363, 761, 776, 986, 1179, 1310
BseMI	GCAATG	1 cut(s)	1446
BseMII	CTCAG	2 cut(s)	894, 1563
BseNI	ACTGG	1 cut(s)	755
BseRI	GAGGAG	3 cut(s)	39, 516, 941
BseXI	GCAGC	6 cut(s)	49, 369, 1363, 1721, 1724, 1802
BseYI	CCCAGC	1 cut(s)	357
Bsh1236I	CGCG	1 cut(s)	1285
Bsh1285I	CGRYCG	1 cut(s)	593
BshFI	GGCC	7 cut(s)	53, 749, 889, 1009, 1172, 1183, 1282
BshNI	GGYRCC	2 cut(s)	1144, 1573
BsiEI	CGRYCG	1 cut(s)	593
BsiHKAI	GWGCWC	3 cut(s)	107, 413, 1467
BsiHKCI	CYCGRG	3 cut(s)	78, 871, 1800
BsiSI	CCGG	5 cut(s)	445, 770, 886, 1067, 1801
BslFI	GGGAC	4 cut(s)	157, 367, 620, 963
BslI	CCNNNNNNNGG	8 cut(s)	228, 252, 363, 761, 776, 986, 1179, 1310
BsmAI	GTCTC	2 cut(s)	1732, 1755
BsmFI	GGGAC	4 cut(s)	157, 367, 620, 963
BsmI	GAATGC	2 cut(s)	199, 1667
BsnI	GGCC	7 cut(s)	53, 749, 889, 1009, 1172, 1183, 1282
BsoBI	CYCGRG	3 cut(s)	78, 871, 1800
Bsp1286I	GDGCHC	5 cut(s)	107, 413, 821, 1040, 1467
Bsp143I	GATC	3 cut(s)	175, 590, 1757
Bsp19I	CCATGG	1 cut(s)	54
BspACI	CCGC	4 cut(s)	1283, 1285, 1354, 1375
BspANI	GGCC	7 cut(s)	53, 749, 889, 1009, 1172, 1183, 1282
BspCNI	CTCAG	2 cut(s)	893, 1562
BspFNI	CGCG	1 cut(s)	1285
BspHI	TCATGA	1 cut(s)	1018
BspLI	GGNNCC	7 cut(s)	355, 356, 513, 1037, 1146, 1171, 1575
BspMAI	CTGCAG	1 cut(s)	67
BspMI	ACCTGC	3 cut(s)	752, 1132, 1634
BspPI	GGATC	2 cut(s)	183, 1765
BspT107I	GGYRCC	2 cut(s)	1144, 1573
BsrDI	GCAATG	1 cut(s)	1446
BsrFI	RCCGGY	1 cut(s)	769
BsrI	ACTGG	1 cut(s)	755
BssAI	RCCGGY	1 cut(s)	769
BssECI	CCNNGG	4 cut(s)	54, 1283, 1507, 1800
BssMI	GATC	3 cut(s)	175, 590, 1757
BssSI	CACGAG	1 cut(s)	322
BssT1I	CCWWGG	1 cut(s)	54
Bst2BI	CACGAG	1 cut(s)	322
Bst2UI	CCWGG	4 cut(s)	516, 1260, 1469, 1571
Bst4CI	ACNGT	6 cut(s)	720, 732, 1690, 1726, 1821, 1827
Bst6I	CTCTTC	2 cut(s)	303, 1309
BstC8I	GCNNGC	2 cut(s)	474, 1305
BstDEI	CTNAG	4 cut(s)	297, 338, 880, 1549
BstDSI	CCRYGG	2 cut(s)	54, 1283
BstEII	GGTNACC	1 cut(s)	1621
BstF5I	GGATG	6 cut(s)	355, 372, 421, 1111, 1129, 1427
BstFNI	CGCG	1 cut(s)	1285
BstH2I	RGCGCY	1 cut(s)	190
BstHHI	GCGC	2 cut(s)	189, 433
BstKTI	GATC	3 cut(s)	178, 593, 1760
BstMAI	GTCTC	2 cut(s)	1732, 1755
BstMBI	GATC	3 cut(s)	175, 590, 1757
BstMCI	CGRYCG	1 cut(s)	593
BstMWI	GCNNNNNNNGC	8 cut(s)	59, 166, 547, 608, 1363, 1372, 1391, 1541
BstNI	CCWGG	4 cut(s)	516, 1260, 1469, 1571
BstNSI	RCATGY	1 cut(s)	545
BstPI	GGTNACC	1 cut(s)	1621
BstSCI	CCNGG	7 cut(s)	444, 514, 1258, 1467, 1569, 1799, 1800
BstSFI	CTRYAG	2 cut(s)	63, 1817
BstUI	CGCG	1 cut(s)	1285
BstV1I	GCAGC	6 cut(s)	49, 369, 1363, 1721, 1724, 1802
BstV2I	GAAGAC	1 cut(s)	1257
BstX2I	RGATCY	1 cut(s)	175
BstXI	CCANNNNNNTGG	2 cut(s)	757, 1210
BstYI	RGATCY	1 cut(s)	175
Bsu36I	CCTNAGG	1 cut(s)	297
BsuRI	GGCC	7 cut(s)	53, 749, 889, 1009, 1172, 1183, 1282
BtgI	CCRYGG	2 cut(s)	54, 1283
BtgZI	GCGATG	1 cut(s)	954
BtsCI	GGATG	6 cut(s)	355, 372, 421, 1111, 1129, 1427
BtsIMutI	CAGTG	5 cut(s)	450, 675, 716, 762, 1823
BveI	ACCTGC	3 cut(s)	752, 1132, 1634
Cac8I	GCNNGC	2 cut(s)	474, 1305
CaiI	CAGNNNCTG	2 cut(s)	1232, 1825
CciI	TCATGA	1 cut(s)	1018
CfoI	GCGC	2 cut(s)	189, 433
Cfr10I	RCCGGY	1 cut(s)	769
Cfr13I	GGNCC	5 cut(s)	243, 354, 512, 747, 1170
Cfr42I	CCGCGG	1 cut(s)	1286
Cfr9I	CCCGGG	1 cut(s)	1800
CseI	GACGC	1 cut(s)	465
Csp6I	GTAC	1 cut(s)	946
CviAII	CATG	8 cut(s)	55, 542, 995, 1019, 1031, 1242, 1334, 1486
CviQI	GTAC	1 cut(s)	946
DdeI	CTNAG	4 cut(s)	297, 338, 880, 1549
DpnI	GATC	3 cut(s)	177, 592, 1759
DpnII	GATC	3 cut(s)	175, 590, 1757
EaeI	YGGCCR	1 cut(s)	1007
Eam1104I	CTCTTC	2 cut(s)	303, 1309
EarI	CTCTTC	2 cut(s)	303, 1309
Ecl136II	GAGCTC	3 cut(s)	105, 411, 1465
Eco130I	CCWWGG	1 cut(s)	54
Eco147I	AGGCCT	1 cut(s)	1183
Eco24I	GRGCYC	5 cut(s)	107, 413, 821, 1040, 1467
Eco47I	GGWCC	3 cut(s)	243, 354, 512
Eco53kI	GAGCTC	3 cut(s)	105, 411, 1465
Eco57I	CTGAAG	1 cut(s)	1254
Eco81I	CCTNAGG	1 cut(s)	297
Eco88I	CYCGRG	3 cut(s)	78, 871, 1800
Eco91I	GGTNACC	1 cut(s)	1621
EcoICRI	GAGCTC	3 cut(s)	105, 411, 1465
EcoO109I	RGGNCCY	2 cut(s)	354, 512
EcoO65I	GGTNACC	1 cut(s)	1621
EcoRI	GAATTC	2 cut(s)	124, 615
EcoRII	CCWGG	4 cut(s)	514, 1258, 1467, 1569
EcoT14I	CCWWGG	1 cut(s)	54
EcoT22I	ATGCAT	2 cut(s)	199, 680
EcoT38I	GRGCYC	5 cut(s)	107, 413, 821, 1040, 1467
ErhI	CCWWGG	1 cut(s)	54
FaeI	CATG	8 cut(s)	58, 545, 998, 1022, 1034, 1245, 1337, 1489
FaqI	GGGAC	4 cut(s)	157, 367, 620, 963
FatI	CATG	8 cut(s)	54, 541, 994, 1018, 1030, 1241, 1333, 1485
Fnu4HI	GCNGC	8 cut(s)	63, 383, 1283, 1352, 1355, 1710, 1713, 1791
FokI	GGATG	6 cut(s)	362, 379, 428, 1116, 1118, 1414
FriOI	GRGCYC	5 cut(s)	107, 413, 821, 1040, 1467
Fsp4HI	GCNGC	8 cut(s)	63, 383, 1283, 1352, 1355, 1710, 1713, 1791
FspBI	CTAG	1 cut(s)	240
GlaI	GCGC	2 cut(s)	188, 432
GluI	GCNGC	8 cut(s)	63, 383, 1283, 1352, 1355, 1710, 1713, 1791
GsaI	CCCAGC	1 cut(s)	361
GsuI	CTGGAG	1 cut(s)	1451
HaeII	RGCGCY	1 cut(s)	190
HaeIII	GGCC	7 cut(s)	53, 749, 889, 1009, 1172, 1183, 1282
HapII	CCGG	5 cut(s)	445, 770, 886, 1067, 1801
HgaI	GACGC	1 cut(s)	465
HhaI	GCGC	2 cut(s)	189, 433
Hin1II	CATG	8 cut(s)	58, 545, 998, 1022, 1034, 1245, 1337, 1489
Hin6I	GCGC	2 cut(s)	187, 431
HinP1I	GCGC	2 cut(s)	187, 431
HincII	GTYRAC	3 cut(s)	1093, 1600, 1770
HindII	GTYRAC	3 cut(s)	1093, 1600, 1770
HindIII	AAGCTT	1 cut(s)	1475
HinfI	GANTC	8 cut(s)	311, 328, 605, 1214, 1637, 1656, 1697, 1805
HpaI	GTTAAC	1 cut(s)	1600
HpaII	CCGG	5 cut(s)	445, 770, 886, 1067, 1801
HphI	GGTGA	4 cut(s)	287, 784, 1081, 1633
Hpy166II	GTNNAC	4 cut(s)	946, 1093, 1600, 1770
Hpy188I	TCNGA	9 cut(s)	175, 316, 415, 577, 621, 1219, 1228, 1566, 1762
Hpy188III	TCNNGA	5 cut(s)	742, 1019, 1197, 1521, 1653
Hpy8I	GTNNAC	4 cut(s)	946, 1093, 1600, 1770
Hpy99I	CGWCG	1 cut(s)	481
HpyAV	CCTTC	4 cut(s)	500, 774, 1194, 1768
HpyCH4III	ACNGT	6 cut(s)	720, 732, 1690, 1726, 1821, 1827
HpyF10VI	GCNNNNNNNGC	8 cut(s)	59, 166, 547, 608, 1363, 1372, 1391, 1541
HpyF3I	CTNAG	4 cut(s)	297, 338, 880, 1549
Hsp92II	CATG	8 cut(s)	58, 545, 998, 1022, 1034, 1245, 1337, 1489
HspAI	GCGC	2 cut(s)	187, 431
KflI	GGGWCCC	1 cut(s)	354
KspAI	GTTAAC	1 cut(s)	1600
KspI	CCGCGG	1 cut(s)	1286
Kzo9I	GATC	3 cut(s)	175, 590, 1757
LmnI	GCTCC	8 cut(s)	184, 408, 685, 1035, 1084, 1243, 1470, 1762
Lsp1109I	GCAGC	6 cut(s)	49, 369, 1363, 1721, 1724, 1802
LweI	GCATC	7 cut(s)	206, 539, 665, 1219, 1432, 1436, 1658
MaeI	CTAG	1 cut(s)	240
MaeIII	GTNAC	5 cut(s)	390, 448, 714, 1621, 1821
MalI	GATC	3 cut(s)	177, 592, 1759
MboI	GATC	3 cut(s)	175, 590, 1757
MboII	GAAGA	9 cut(s)	16, 56, 105, 314, 320, 385, 1262, 1326, 1331
MfeI	CAATTG	1 cut(s)	1041
MflI	RGATCY	1 cut(s)	175
MhlI	GDGCHC	5 cut(s)	107, 413, 821, 1040, 1467
MlyI	GAGTC	4 cut(s)	320, 614, 1665, 1706
MmeI	TCCRAC	4 cut(s)	555, 826, 903, 1833
Mph1103I	ATGCAT	2 cut(s)	199, 680
MroXI	GAANNNNTTC	1 cut(s)	840
MseI	TTAA	3 cut(s)	1388, 1479, 1599
MslI	CAYNNNNRTG	2 cut(s)	455, 1208
MspA1I	CMGCKG	4 cut(s)	1268, 1285, 1354, 1375
MspI	CCGG	5 cut(s)	445, 770, 886, 1067, 1801
MspR9I	CCNGG	7 cut(s)	446, 516, 1260, 1469, 1571, 1801, 1802
MunI	CAATTG	1 cut(s)	1041
Mva1269I	GAATGC	2 cut(s)	199, 1667
MvaI	CCWGG	4 cut(s)	516, 1260, 1469, 1571
MvnI	CGCG	1 cut(s)	1285
MwoI	GCNNNNNNNGC	8 cut(s)	59, 166, 547, 608, 1363, 1372, 1391, 1541
NciI	CCSGG	3 cut(s)	446, 1801, 1802
NcoI	CCATGG	1 cut(s)	54
NdeII	GATC	3 cut(s)	175, 590, 1757
NlaIII	CATG	8 cut(s)	58, 545, 998, 1022, 1034, 1245, 1337, 1489
NlaIV	GGNNCC	7 cut(s)	355, 356, 513, 1037, 1146, 1171, 1575
NmeAIII	GCCGAG	1 cut(s)	628
NmuCI	GTSAC	4 cut(s)	448, 714, 1621, 1821
NsiI	ATGCAT	2 cut(s)	199, 680
NspI	RCATGY	1 cut(s)	545
PaeR7I	CTCGAG	1 cut(s)	78
PagI	TCATGA	1 cut(s)	1018
PaqCI	CACCTGC	2 cut(s)	752, 1132
PceI	AGGCCT	1 cut(s)	1183
PcsI	WCGNNNNNNNCGW	1 cut(s)	113
PctI	GAATGC	2 cut(s)	199, 1667
PdmI	GAANNNNTTC	1 cut(s)	840
PfeI	GAWTC	4 cut(s)	328, 1214, 1637, 1805
PflFI	GACNNNGTC	1 cut(s)	446
PflMI	CCANNNNNTGG	1 cut(s)	228
PkrI	GCNGC	8 cut(s)	64, 384, 1284, 1353, 1356, 1711, 1714, 1792
Ple19I	CGATCG	1 cut(s)	593
PleI	GAGTC	4 cut(s)	319, 613, 1664, 1705
PpsI	GAGTC	4 cut(s)	319, 613, 1664, 1705
PpuMI	RGGWCCY	2 cut(s)	354, 512
Psp124BI	GAGCTC	3 cut(s)	107, 413, 1467
Psp5II	RGGWCCY	2 cut(s)	354, 512
Psp6I	CCWGG	4 cut(s)	514, 1258, 1467, 1569
PspEI	GGTNACC	1 cut(s)	1621
PspFI	CCCAGC	1 cut(s)	357
PspGI	CCWGG	4 cut(s)	514, 1258, 1467, 1569
PspN4I	GGNNCC	7 cut(s)	355, 356, 513, 1037, 1146, 1171, 1575
PspPI	GGNCC	5 cut(s)	243, 354, 512, 747, 1170
PspPPI	RGGWCCY	2 cut(s)	354, 512
PspXI	VCTCGAGB	1 cut(s)	78
PsrI	GAACNNNNNNTAC	2 cut(s)	982, 1014
PstI	CTGCAG	1 cut(s)	67
PstNI	CAGNNNCTG	2 cut(s)	1232, 1825
PsuI	RGATCY	1 cut(s)	175
PsyI	GACNNNGTC	1 cut(s)	446
PvuI	CGATCG	1 cut(s)	593
PvuII	CAGCTG	1 cut(s)	1268
RsaI	GTAC	1 cut(s)	947
RsaNI	GTAC	1 cut(s)	946
RseI	CAYNNNNRTG	2 cut(s)	455, 1208
SacI	GAGCTC	3 cut(s)	107, 413, 1467
SacII	CCGCGG	1 cut(s)	1286
SaqAI	TTAA	3 cut(s)	1388, 1479, 1599
SatI	GCNGC	8 cut(s)	63, 383, 1283, 1352, 1355, 1710, 1713, 1791
Sau3AI	GATC	3 cut(s)	175, 590, 1757
Sau96I	GGNCC	5 cut(s)	243, 354, 512, 747, 1170
SchI	GAGTC	4 cut(s)	320, 614, 1665, 1706
ScrFI	CCNGG	7 cut(s)	446, 516, 1260, 1469, 1571, 1801, 1802
SduI	GDGCHC	5 cut(s)	107, 413, 821, 1040, 1467
SfaNI	GCATC	7 cut(s)	206, 539, 665, 1219, 1432, 1436, 1658
SfcI	CTRYAG	2 cut(s)	63, 1817
Sfr274I	CTCGAG	1 cut(s)	78
Sfr303I	CCGCGG	1 cut(s)	1286
SgrBI	CCGCGG	1 cut(s)	1286
SinI	GGWCC	3 cut(s)	243, 354, 512
SlaI	CTCGAG	1 cut(s)	78
SmaI	CCCGGG	1 cut(s)	1802
SmiMI	CAYNNNNRTG	2 cut(s)	455, 1208
SmlI	CTYRAG	4 cut(s)	78, 742, 1177, 1752
SmoI	CTYRAG	4 cut(s)	78, 742, 1177, 1752
SseBI	AGGCCT	1 cut(s)	1183
SsiI	CCGC	4 cut(s)	1283, 1285, 1354, 1375
SspI	AATATT	1 cut(s)	1015
SspMI	CTAG	1 cut(s)	240
SstI	GAGCTC	3 cut(s)	107, 413, 1467
StuI	AGGCCT	1 cut(s)	1183
StyD4I	CCNGG	7 cut(s)	444, 514, 1258, 1467, 1569, 1799, 1800
StyI	CCWWGG	1 cut(s)	54
TaaI	ACNGT	6 cut(s)	720, 732, 1690, 1726, 1821, 1827
TaqI	TCGA	9 cut(s)	79, 87, 101, 116, 200, 479, 589, 955, 1662
TaqII	GACCGA	1 cut(s)	323
TatI	WGTACW	1 cut(s)	945
TauI	GCSGC	2 cut(s)	1285, 1357
TfiI	GAWTC	4 cut(s)	328, 1214, 1637, 1805
Tru1I	TTAA	3 cut(s)	1388, 1479, 1599
Tru9I	TTAA	3 cut(s)	1388, 1479, 1599
TscAI	CASTG	5 cut(s)	457, 675, 723, 762, 1830
TseFI	GTSAC	4 cut(s)	448, 714, 1621, 1821
TseI	GCWGC	6 cut(s)	62, 382, 1351, 1709, 1712, 1790
Tsp45I	GTSAC	4 cut(s)	448, 714, 1621, 1821
TspDTI	ATGAA	8 cut(s)	17, 57, 321, 480, 807, 983, 1007, 1287
TspMI	CCCGGG	1 cut(s)	1800
TspRI	CASTG	5 cut(s)	457, 675, 723, 762, 1830
Tth111I	GACNNNGTC	1 cut(s)	446
Van91I	CCANNNNNTGG	1 cut(s)	228
VpaK11BI	GGWCC	3 cut(s)	243, 354, 512
XapI	RAATTY	6 cut(s)	124, 154, 202, 615, 1222, 1560
XceI	RCATGY	1 cut(s)	545
XhoI	CTCGAG	1 cut(s)	78
XmaI	CCCGGG	1 cut(s)	1800
XmnI	GAANNNNTTC	1 cut(s)	840
XspI	CTAG	1 cut(s)	240
Zsp2I	ATGCAT	2 cut(s)	199, 680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.