Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0011863

Physical Location & Seq

Genomic Coordinates Reverse (-)

38303988 .. 38306878

Gene Structure 2891 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG253800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGAAGATGGAGATGGGTGTAGGTGGTGGGGTTTGGAAAGATGAAGATAAGGCCATGGTGGCTGCGGTTTTAGGCACTCGGGCTTTCGATTACTTGATTTCGAGCTCTGTTTCTTCGAATGAGAATTCATGCATGGGCATAGGGACCGATGAGAGCTTGCACAGCAAGCTTTCAGATCTTGTGGAGCCTCCAAACGCTTCGAATTTCAGCTGGAACTATGCGATTTTCTGGCAAATTTCGAGGTCCAATTCTGGGGATTGGGTTCTGTGTTGGGGGGATGGGTCTTGTAGGGAGCCCAAGGAAGGTGAAGATTCTGAAGCTTCGAGAATTCTAAGTCTCAGGCTCGAGGATGAGACCGAGCAGACCATGAGGAAGATAGTGCTGCAGAAGTTGCACACTTTGTTTGGGAGCTCAGATGAGTATAATGGTGCTCTTGGGTTGGACCGAGTTACAGATACAGAGATGTTGTTCCTTGCATCCATGTATTTTTCGTTTCCGAGAGGGGAAGGTGGCCCGGGCAAGTGCTTGGCATCCGGCAAGCAGGTGTGGCTCTCGGACTTGTTGAAGTCAGGGTCGGATTATTGTGTCAGATCGTTTCTGGCTAGGTCTGCTGGAATCCAGACCATTGTTTTAGTCCCAACAGATGTTGGTGTGGTTGAACTGGGTTCAGTAAGATGTATACCTGAGAATTTGGAAATGTTGCAGTCGATAAGGTTATTATTTTCGACACAGGCCTCACTGACAAGGGCTAAGCCAATGGCAGCCTTGCCAGTAATGAGCAACAAGAGAGATGAGATTGCTGCACATCAAAATCATTTAAGCACTGTGGAGAGAGGAGGGGAAGGAGTTCCCAAGATTTTCGGCCAAGATTTGAACTCGGGGAACCCAGGGCGCACTCGGTACAGGGAGAAACTTGCTGTTAGGAAGGTGGAAGAGAGGCCGTGGGATGCCTATGCCAACGGGAACAGGATTGCGTTTTCTAGTCCTCAAAACGGAATTCATGGTTCAAGTTGGGGGCAGAGTCATGTTGGTGTGAAACAAGGGAGTCCGGCTGCGGTTTATGCTTCTCAAGGACCTGTGAATAATTTGCAGGAGCTTGCCAACGGAGGCAGGGATGATTTTCGGCTCAAGCCCTATCAACCGCAAAAGCAGGCGCCTATGCAAATTGACTTTTCCGGGGCTACTTCAAGGCCTTCGGTGGTTTCCCGACCCATTGTTGTTGAATCTGAGAATTCAGATGCTGAAGCTCCAGGCAAGGAAGAGCTGCCAGGTACAGCTGAAGAGAGGAGGCCACGGAAACGGGGTAGGAAGCCAGCAAATGGAAGAGAAGAGCCCCTCAATCATGTTGAAGCAGAAAGGCAGCGTCGGGAGAAGCTGAACCAGCGCTTCTATGCTTTACGAGCTGTTGTGCCAAACATATCCAAGATGGACAAAGCATCTTTGTTGGGAGATGCCATTGATTATATCAATGAGCTTCAGGCAAAGCTTAAGGTCATGGAATCTGAGAGGGAGAGTGTAGGAGGCACTTCAAGAGATACCTCAGCTTTGGTAGCTAACCCAAGTTCAGAAAATCAGATCCGGGCTCCCCATGTTGACATTCAAGCTGTGCATGATGAGGTTGTTGTAAGCGTGAGCTGCCCTTTAGATTCACACCCTGCATCAAGAATCATCCAAGCATTTAAAGAAGCACAAATCAGTGTTGTTGAGTCGAAATTCACCGCAGCAAACGATTCTGTGTTTCATACATTTGTTGTCAAGTCTCAAGGATCTGAACAATTGACGAAGGAGAAGTTGATTGCAGCATTTTCCAGGGAATCCAACTCCTTACAATCATTGTCATCAGTTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009892 GO:0010033 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048519 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

616

Amino Acids

67.45

Weight (kDa)

6.09

Isoelectric Point (pI)

45.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	53 - 241	3.8e-51	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	447 - 493	8.2e-13	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	531 - 602	4e-07	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011863)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01260 AT1G01260 AT1G01260
fragaria_vesca	FvH4_7g16800
malus_domestica	MD01G1082700.v1.1 MD07G1151000.v1.1
prunus_persica	Prupe.2G190100_v2.0.a1 Prupe.2G190100_v2.0.a1
pyrus_communis	pycom07g14930
rosa_chinensis	RchiOBHm_Chr1g0360001
rosa_laevigata	RLG00000027841
rosa_multiflora	Rmu_ssc0000368.1_g000016
rosa_roxburghii	Rroxscaffold_4G00296560
rosa_rugosa	Rorug01G0274500
rosa_samantha	Rh1AG288300 Rh1BG253800 Rh1CG271300 Rh1DG282900
rosa_wichuraiana	Rw1G025560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	532
Acc36I	ACCTGC	1 cut(s)	532
AccB1I	GGYRCC	1 cut(s)	1153
AccB7I	CCANNNNNTGG	1 cut(s)	1319
AccI	GTMKAC	1 cut(s)	679
AciI	CCGC	4 cut(s)	65, 1055, 1142, 1719
AclWI	GGATC	2 cut(s)	1570, 1774
AcoI	YGGCCR	1 cut(s)	862
AcsI	RAATTY	8 cut(s)	124, 202, 234, 327, 688, 996, 1231, 1712
AcuI	CTGAAG	4 cut(s)	336, 1263, 1299, 1460
AcyI	GRCGYC	1 cut(s)	1154
AfaI	GTAC	2 cut(s)	902, 1273
AfeI	AGCGCT	1 cut(s)	1385
AfiI	CCNNNNNNNGG	4 cut(s)	252, 302, 992, 1319
AflII	CTTAAG	1 cut(s)	1487
AgsI	TTSAA	9 cut(s)	565, 659, 874, 1008, 1188, 1223, 1349, 1530, 1601
AjnI	CCWGG	4 cut(s)	886, 1249, 1267, 1808
Alw21I	GWGCWC	3 cut(s)	107, 413, 433
Alw26I	GTCTC	3 cut(s)	341, 347, 1764
AlwI	GGATC	2 cut(s)	1570, 1774
AlwNI	CAGNNNCTG	1 cut(s)	1241
Ama87I	CYCGRG	4 cut(s)	78, 344, 514, 877
Aor51HI	AGCGCT	1 cut(s)	1385
AoxI	GGCC	7 cut(s)	51, 511, 732, 862, 938, 1190, 1289
ApoI	RAATTY	8 cut(s)	124, 202, 234, 327, 688, 996, 1231, 1712
Asp700I	GAANNNNTTC	1 cut(s)	846
AspLEI	GCGC	3 cut(s)	894, 1156, 1386
AspS9I	GGNCC	5 cut(s)	144, 243, 442, 512, 1073
AsuC2I	CCSGG	4 cut(s)	515, 516, 1177, 1580
AsuHPI	GGTGA	2 cut(s)	317, 1708
AsuII	TTCGAA	2 cut(s)	116, 200
AvaI	CYCGRG	4 cut(s)	78, 344, 514, 877
AvaII	GGWCC	4 cut(s)	144, 243, 442, 1073
BanI	GGYRCC	1 cut(s)	1153
BanII	GRGCYC	5 cut(s)	107, 297, 413, 1335, 1585
Bbv12I	GWGCWC	3 cut(s)	107, 413, 433
BbvCI	CCTCAGC	1 cut(s)	1540
BccI	CCATC	3 cut(s)	7, 272, 1420
BceAI	ACGGC	1 cut(s)	925
BciT130I	CCWGG	4 cut(s)	888, 1251, 1269, 1810
BcnI	CCSGG	4 cut(s)	515, 516, 1177, 1580
BcoDI	GTCTC	3 cut(s)	341, 347, 1764
BfaI	CTAG	2 cut(s)	603, 981
BfmI	CTRYAG	1 cut(s)	383
BfoI	RGCGCY	2 cut(s)	1157, 1387
BfrI	CTTAAG	1 cut(s)	1487
BfuAI	ACCTGC	1 cut(s)	532
BglI	GCCNNNNNGGC	1 cut(s)	59
BglII	AGATCT	1 cut(s)	175
BlpI	GCTNAGC	1 cut(s)	750
Bme1390I	CCNGG	8 cut(s)	515, 516, 888, 1177, 1251, 1269, 1580, 1810
Bme18I	GGWCC	4 cut(s)	144, 243, 442, 1073
BmeT110I	CYCGRG	4 cut(s)	78, 344, 514, 877
BmgT120I	GGNCC	5 cut(s)	144, 243, 442, 512, 1073
BmiI	GGNNCC	6 cut(s)	145, 186, 294, 884, 1155, 1584
BmrFI	CCNGG	8 cut(s)	515, 516, 888, 1177, 1251, 1269, 1580, 1810
BmrI	ACTGGG	1 cut(s)	671
BmsI	GCATC	7 cut(s)	485, 539, 937, 1228, 1441, 1445, 1667
BmuI	ACTGGG	1 cut(s)	671
BpmI	CTGGAG	1 cut(s)	1233
Bpu10I	CCTNAGC	1 cut(s)	1540
Bpu1102I	GCTNAGC	1 cut(s)	750
Bpu14I	TTCGAA	2 cut(s)	116, 200
BpuEI	CTTGAG	3 cut(s)	1053, 1112, 1746
BpuMI	CCSGG	4 cut(s)	515, 516, 1177, 1580
BsaHI	GRCGYC	1 cut(s)	1154
BsaI	GGTCTC	1 cut(s)	347
BsaJI	CCNNGG	9 cut(s)	54, 297, 514, 886, 887, 941, 1176, 1292, 1809
Bsc4I	CCNNNNNNNGG	4 cut(s)	252, 302, 992, 1319
Bse1I	ACTGG	2 cut(s)	666, 770
BseBI	CCWGG	4 cut(s)	888, 1251, 1269, 1810
BseDI	CCNNGG	9 cut(s)	54, 297, 514, 886, 887, 941, 1176, 1292, 1809
BseGI	GGATG	7 cut(s)	283, 355, 476, 530, 952, 1120, 1668
BseLI	CCNNNNNNNGG	4 cut(s)	252, 302, 992, 1319
BseMII	CTCAG	6 cut(s)	352, 426, 675, 1218, 1494, 1554
BseNI	ACTGG	2 cut(s)	666, 770
BseRI	GAGGAG	2 cut(s)	849, 1300
BsgI	GTGCAG	1 cut(s)	786
BshFI	GGCC	7 cut(s)	53, 513, 734, 864, 940, 1192, 1291
BshNI	GGYRCC	1 cut(s)	1153
BsiHKAI	GWGCWC	3 cut(s)	107, 413, 433
BsiHKCI	CYCGRG	4 cut(s)	78, 344, 514, 877
BsiSI	CCGG	5 cut(s)	515, 534, 1049, 1176, 1579
BslFI	GGGAC	2 cut(s)	157, 620
BslI	CCNNNNNNNGG	4 cut(s)	252, 302, 992, 1319
BsmAI	GTCTC	3 cut(s)	341, 347, 1764
BsmFI	GGGAC	2 cut(s)	157, 620
BsnI	GGCC	7 cut(s)	53, 513, 734, 864, 940, 1192, 1291
Bso31I	GGTCTC	1 cut(s)	347
BsoBI	CYCGRG	4 cut(s)	78, 344, 514, 877
Bsp119I	TTCGAA	2 cut(s)	116, 200
Bsp1286I	GDGCHC	6 cut(s)	107, 297, 413, 433, 1335, 1585
Bsp143I	GATC	4 cut(s)	175, 590, 1575, 1766
Bsp1720I	GCTNAGC	1 cut(s)	750
Bsp19I	CCATGG	1 cut(s)	54
BspACI	CCGC	4 cut(s)	65, 1055, 1142, 1719
BspANI	GGCC	7 cut(s)	53, 513, 734, 864, 940, 1192, 1291
BspCNI	CTCAG	6 cut(s)	351, 425, 676, 1219, 1495, 1553
BspLI	GGNNCC	6 cut(s)	145, 186, 294, 884, 1155, 1584
BspMAI	CTGCAG	1 cut(s)	387
BspMI	ACCTGC	1 cut(s)	532
BspPI	GGATC	2 cut(s)	1570, 1774
BspQI	GCTCTTC	2 cut(s)	1254, 1323
BspT104I	TTCGAA	2 cut(s)	116, 200
BspT107I	GGYRCC	1 cut(s)	1153
BspTI	CTTAAG	1 cut(s)	1487
BspTNI	GGTCTC	1 cut(s)	347
BsrI	ACTGG	2 cut(s)	666, 770
BssECI	CCNNGG	9 cut(s)	54, 297, 514, 886, 887, 941, 1176, 1292, 1809
BssMI	GATC	4 cut(s)	175, 590, 1575, 1766
BssNAI	GTATAC	1 cut(s)	680
BssNI	GRCGYC	1 cut(s)	1154
BssT1I	CCWWGG	2 cut(s)	54, 297
Bst1107I	GTATAC	1 cut(s)	680
Bst2UI	CCWGG	4 cut(s)	888, 1251, 1269, 1810
Bst4CI	ACNGT	1 cut(s)	826
Bst6I	CTCTTC	5 cut(s)	927, 1254, 1275, 1318, 1323
BstACI	GRCGYC	1 cut(s)	1154
BstAFI	CTTAAG	1 cut(s)	1487
BstAPI	GCANNNNNTGC	1 cut(s)	391
BstBI	TTCGAA	2 cut(s)	116, 200
BstC8I	GCNNGC	6 cut(s)	158, 167, 539, 1098, 1152, 1314
BstDEI	CTNAG	8 cut(s)	332, 338, 412, 684, 750, 1227, 1503, 1540
BstDSI	CCRYGG	3 cut(s)	54, 941, 1292
BstF5I	GGATG	7 cut(s)	283, 355, 476, 530, 952, 1120, 1668
BstH2I	RGCGCY	2 cut(s)	1157, 1387
BstHHI	GCGC	3 cut(s)	894, 1156, 1386
BstKTI	GATC	4 cut(s)	178, 593, 1578, 1769
BstMAI	GTCTC	3 cut(s)	341, 347, 1764
BstMBI	GATC	4 cut(s)	175, 590, 1575, 1766
BstNI	CCWGG	4 cut(s)	888, 1251, 1269, 1810
BstSCI	CCNGG	8 cut(s)	513, 514, 886, 1175, 1249, 1267, 1578, 1808
BstSFI	CTRYAG	1 cut(s)	383
BstX2I	RGATCY	3 cut(s)	175, 1575, 1766
BstYI	RGATCY	3 cut(s)	175, 1575, 1766
BstZ17I	GTATAC	1 cut(s)	680
BsuRI	GGCC	7 cut(s)	53, 513, 734, 864, 940, 1192, 1291
BtgI	CCRYGG	3 cut(s)	54, 941, 1292
BtsCI	GGATG	7 cut(s)	283, 355, 476, 530, 952, 1120, 1668
BtsIMutI	CAGTG	3 cut(s)	737, 822, 1702
BveI	ACCTGC	1 cut(s)	532
Cac8I	GCNNGC	6 cut(s)	158, 167, 539, 1098, 1152, 1314
CaiI	CAGNNNCTG	1 cut(s)	1241
CfoI	GCGC	3 cut(s)	894, 1156, 1386
Cfr13I	GGNCC	5 cut(s)	144, 243, 442, 512, 1073
Cfr9I	CCCGGG	1 cut(s)	514
CseI	GACGC	1 cut(s)	1352
Csp6I	GTAC	2 cut(s)	901, 1272
CviQI	GTAC	2 cut(s)	901, 1272
DdeI	CTNAG	8 cut(s)	332, 338, 412, 684, 750, 1227, 1503, 1540
DinI	GGCGCC	1 cut(s)	1155
DpnI	GATC	4 cut(s)	177, 592, 1577, 1768
DpnII	GATC	4 cut(s)	175, 590, 1575, 1766
DraI	TTTAAA	1 cut(s)	1681
EaeI	YGGCCR	1 cut(s)	862
Eam1104I	CTCTTC	5 cut(s)	927, 1254, 1275, 1318, 1323
EarI	CTCTTC	5 cut(s)	927, 1254, 1275, 1318, 1323
Ecl136II	GAGCTC	2 cut(s)	105, 411
Eco130I	CCWWGG	2 cut(s)	54, 297
Eco147I	AGGCCT	2 cut(s)	734, 1192
Eco24I	GRGCYC	5 cut(s)	107, 297, 413, 1335, 1585
Eco31I	GGTCTC	1 cut(s)	347
Eco47I	GGWCC	4 cut(s)	144, 243, 442, 1073
Eco47III	AGCGCT	1 cut(s)	1385
Eco53kI	GAGCTC	2 cut(s)	105, 411
Eco57I	CTGAAG	4 cut(s)	336, 1263, 1299, 1460
Eco88I	CYCGRG	4 cut(s)	78, 344, 514, 877
EcoICRI	GAGCTC	2 cut(s)	105, 411
EcoO109I	RGGNCCY	1 cut(s)	1073
EcoRI	GAATTC	4 cut(s)	124, 327, 996, 1231
EcoRII	CCWGG	4 cut(s)	886, 1249, 1267, 1808
EcoT14I	CCWWGG	2 cut(s)	54, 297
EcoT22I	ATGCAT	1 cut(s)	134
EcoT38I	GRGCYC	5 cut(s)	107, 297, 413, 1335, 1585
EgeI	GGCGCC	1 cut(s)	1155
EheI	GGCGCC	1 cut(s)	1155
ErhI	CCWWGG	2 cut(s)	54, 297
FaqI	GGGAC	2 cut(s)	157, 620
FblI	GTMKAC	1 cut(s)	679
FokI	GGATG	7 cut(s)	290, 362, 463, 517, 959, 1127, 1655
FriOI	GRGCYC	5 cut(s)	107, 297, 413, 1335, 1585
FspBI	CTAG	2 cut(s)	603, 981
GlaI	GCGC	3 cut(s)	893, 1155, 1385
GsuI	CTGGAG	1 cut(s)	1233
HaeII	RGCGCY	2 cut(s)	1157, 1387
HaeIII	GGCC	7 cut(s)	53, 513, 734, 864, 940, 1192, 1291
HapII	CCGG	5 cut(s)	515, 534, 1049, 1176, 1579
HgaI	GACGC	1 cut(s)	1352
HhaI	GCGC	3 cut(s)	894, 1156, 1386
Hin1I	GRCGYC	1 cut(s)	1154
Hin6I	GCGC	3 cut(s)	892, 1154, 1384
HinP1I	GCGC	3 cut(s)	892, 1154, 1384
HincII	GTYRAC	1 cut(s)	1594
HindII	GTYRAC	1 cut(s)	1594
HindIII	AAGCTT	3 cut(s)	167, 318, 1484
HpaII	CCGG	5 cut(s)	515, 534, 1049, 1176, 1579
HphI	GGTGA	2 cut(s)	317, 1708
Hpy166II	GTNNAC	2 cut(s)	680, 1594
Hpy188III	TCNNGA	6 cut(s)	324, 619, 1206, 1367, 1530, 1662
Hpy8I	GTNNAC	2 cut(s)	680, 1594
Hpy99I	CGWCG	1 cut(s)	1368
HpyAV	CCTTC	6 cut(s)	296, 500, 836, 919, 1203, 1777
HpyCH4III	ACNGT	1 cut(s)	826
HpyF3I	CTNAG	8 cut(s)	332, 338, 412, 684, 750, 1227, 1503, 1540
Hsp92I	GRCGYC	1 cut(s)	1154
HspAI	GCGC	3 cut(s)	892, 1154, 1384
KasI	GGCGCC	1 cut(s)	1153
Kzo9I	GATC	4 cut(s)	175, 590, 1575, 1766
LguI	GCTCTTC	2 cut(s)	1254, 1323
LmnI	GCTCC	6 cut(s)	184, 292, 408, 1093, 1252, 1588
LweI	GCATC	7 cut(s)	485, 539, 937, 1228, 1441, 1445, 1667
MaeI	CTAG	2 cut(s)	603, 981
MaeIII	GTNAC	1 cut(s)	448
MalI	GATC	4 cut(s)	177, 592, 1577, 1768
MboI	GATC	4 cut(s)	175, 590, 1575, 1766
MfeI	CAATTG	1 cut(s)	1775
MflI	RGATCY	3 cut(s)	175, 1575, 1766
MhlI	GDGCHC	6 cut(s)	107, 297, 413, 433, 1335, 1585
Mly113I	GGCGCC	1 cut(s)	1154
MlyI	GAGTC	3 cut(s)	1030, 1054, 1715
MmeI	TCCRAC	3 cut(s)	420, 555, 1842
Mph1103I	ATGCAT	1 cut(s)	134
MroXI	GAANNNNTTC	1 cut(s)	846
MseI	TTAA	3 cut(s)	818, 1488, 1680
MslI	CAYNNNNRTG	1 cut(s)	1029
MspA1I	CMGCKG	2 cut(s)	210, 1277
MspCI	CTTAAG	1 cut(s)	1487
MspI	CCGG	5 cut(s)	515, 534, 1049, 1176, 1579
MspR9I	CCNGG	8 cut(s)	515, 516, 888, 1177, 1251, 1269, 1580, 1810
MunI	CAATTG	1 cut(s)	1775
MvaI	CCWGG	4 cut(s)	888, 1251, 1269, 1810
NarI	GGCGCC	1 cut(s)	1154
NciI	CCSGG	4 cut(s)	515, 516, 1177, 1580
NcoI	CCATGG	1 cut(s)	54
NdeII	GATC	4 cut(s)	175, 590, 1575, 1766
NlaIV	GGNNCC	6 cut(s)	145, 186, 294, 884, 1155, 1584
NsiI	ATGCAT	1 cut(s)	134
NspV	TTCGAA	2 cut(s)	116, 200
PaeR7I	CTCGAG	1 cut(s)	344
PaqCI	CACCTGC	1 cut(s)	532
PasI	CCCWGGG	1 cut(s)	887
PceI	AGGCCT	2 cut(s)	734, 1192
PciSI	GCTCTTC	2 cut(s)	1254, 1323
PdmI	GAANNNNTTC	1 cut(s)	846
PfeI	GAWTC	8 cut(s)	311, 615, 1223, 1499, 1646, 1665, 1730, 1814
PflMI	CCANNNNNTGG	1 cut(s)	1319
PleI	GAGTC	3 cut(s)	1029, 1053, 1714
PluTI	GGCGCC	1 cut(s)	1157
PpsI	GAGTC	3 cut(s)	1029, 1053, 1714
PpuMI	RGGWCCY	1 cut(s)	1073
Psp124BI	GAGCTC	2 cut(s)	107, 413
Psp5II	RGGWCCY	1 cut(s)	1073
Psp6I	CCWGG	4 cut(s)	886, 1249, 1267, 1808
PspGI	CCWGG	4 cut(s)	886, 1249, 1267, 1808
PspN4I	GGNNCC	6 cut(s)	145, 186, 294, 884, 1155, 1584
PspPI	GGNCC	5 cut(s)	144, 243, 442, 512, 1073
PspPPI	RGGWCCY	1 cut(s)	1073
PspXI	VCTCGAGB	1 cut(s)	344
PstI	CTGCAG	1 cut(s)	387
PstNI	CAGNNNCTG	1 cut(s)	1241
PsuI	RGATCY	3 cut(s)	175, 1575, 1766
PvuII	CAGCTG	2 cut(s)	210, 1277
RsaI	GTAC	2 cut(s)	902, 1273
RsaNI	GTAC	2 cut(s)	901, 1272
RseI	CAYNNNNRTG	1 cut(s)	1029
SacI	GAGCTC	2 cut(s)	107, 413
SapI	GCTCTTC	2 cut(s)	1254, 1323
SaqAI	TTAA	3 cut(s)	818, 1488, 1680
Sau3AI	GATC	4 cut(s)	175, 590, 1575, 1766
Sau96I	GGNCC	5 cut(s)	144, 243, 442, 512, 1073
SchI	GAGTC	3 cut(s)	1030, 1054, 1715
ScrFI	CCNGG	8 cut(s)	515, 516, 888, 1177, 1251, 1269, 1580, 1810
SduI	GDGCHC	6 cut(s)	107, 297, 413, 433, 1335, 1585
SfaNI	GCATC	7 cut(s)	485, 539, 937, 1228, 1441, 1445, 1667
SfcI	CTRYAG	1 cut(s)	383
SfoI	GGCGCC	1 cut(s)	1155
Sfr274I	CTCGAG	1 cut(s)	344
SfuI	TTCGAA	2 cut(s)	116, 200
SinI	GGWCC	4 cut(s)	144, 243, 442, 1073
SlaI	CTCGAG	1 cut(s)	344
SmaI	CCCGGG	1 cut(s)	516
SmiMI	CAYNNNNRTG	1 cut(s)	1029
SmlI	CTYRAG	5 cut(s)	344, 1068, 1127, 1487, 1761
SmoI	CTYRAG	5 cut(s)	344, 1068, 1127, 1487, 1761
SrfI	GCCCGGGC	1 cut(s)	516
SseBI	AGGCCT	2 cut(s)	734, 1192
SsiI	CCGC	4 cut(s)	65, 1055, 1142, 1719
SspDI	GGCGCC	1 cut(s)	1153
SspMI	CTAG	2 cut(s)	603, 981
SstI	GAGCTC	2 cut(s)	107, 413
StuI	AGGCCT	2 cut(s)	734, 1192
StyD4I	CCNGG	8 cut(s)	513, 514, 886, 1175, 1249, 1267, 1578, 1808
StyI	CCWWGG	2 cut(s)	54, 297
TaaI	ACNGT	1 cut(s)	826
TaqII	GACCGA	3 cut(s)	161, 371, 459
TfiI	GAWTC	8 cut(s)	311, 615, 1223, 1499, 1646, 1665, 1730, 1814
Tru1I	TTAA	3 cut(s)	818, 1488, 1680
Tru9I	TTAA	3 cut(s)	818, 1488, 1680
TscAI	CASTG	3 cut(s)	744, 829, 1702
TspDTI	ATGAA	5 cut(s)	17, 57, 117, 989, 1730
TspGWI	ACGGA	3 cut(s)	1008, 1119, 1309
TspMI	CCCGGG	1 cut(s)	514
TspRI	CASTG	3 cut(s)	744, 829, 1702
Van91I	CCANNNNNTGG	1 cut(s)	1319
Vha464I	CTTAAG	1 cut(s)	1487
VpaK11BI	GGWCC	4 cut(s)	144, 243, 442, 1073
XapI	RAATTY	8 cut(s)	124, 202, 234, 327, 688, 996, 1231, 1712
XhoI	CTCGAG	1 cut(s)	344
XmaI	CCCGGG	1 cut(s)	514
XmiI	GTMKAC	1 cut(s)	679
XmnI	GAANNNNTTC	1 cut(s)	846
XspI	CTAG	2 cut(s)	603, 981
Zsp2I	ATGCAT	1 cut(s)	134

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.