Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0011863

Physical Location & Seq

Genomic Coordinates Reverse (-)

16956817 .. 16958649

Gene Structure 1833 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g14930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGAAGATTGAGATGGCTTTAGGAGGAGGGGTTTGGAATGATGAAGATAAGGCCATGGTTGCTGCAGTTTTAGGAACTCGAGCTGTCGATTACTTGATTTCGAGCTCGGTTTCTTCGATTGAGAATTCGTGTATGGGGATAGGGAGTGATGAGAATTTGCACAACAAGCTTTCGGATCTTGTGGAGCGTCCGAGTGCATCGAATTTTAGCTGGAATTATGCCATTTTCTGGCAGATTTCTAGGTCCAAGTCTGGGGATTGGGTTTTGTGTTGGGGTGATGGTTCTTGTAGAGAGCCTAAGGAAGATGAAGAGTCCGAAACCACGAGGATTCTCGGTCTTAGGCTTGAGGATGGGACCCAGCAAAGGATGAGGAAGATAGTGCTGCAAAAGTTACACAATTTGTTTGGGAGCTCAGATGAGTATAATGGTGCTCTTGGATTAGACCGGGTCACTGATATGGAGATGTTCTTGCTTGCGTCGATGTATTTTTCATTTCCAAGAGGAGAAGGGGGTCCTGGCAAGTGCTTGGCATCTGGGAAGCATGTCTGGCTCTTGGACTTATTGAAATCAGGGTCGGAGTATTGTGTTCGATCGTTTCTTGCCGAATCTGCTGGAATTCAGACCATTGTTTTAGTCCCAACAGATGTTGGTGTAGTTGAATTGGGTTCAGTGAGATGCATAGGGGAGCGATTAGAGTTGTTGCAGTCCATAAGGTCACTGTTTTCTACAGAGTCCTCGTTCTTAAGGGCCAAGCCAGTGGCAGGTGTGCCGGTGATTGGAAGGAGGATAGATGAAAATGTCCAACTAACTAATTTGAGCCCTGTGGAGAGAGGGGAAGTAGTTCCCAAGATTTTCGGGCAAGATTTGAACTCAGGGAACTCAGTCCGGCCTCGTTATAGAGAAAAACTTGCTGTTAGAAAGTTGGAGGAGAGGCCGTGCGATGTGTACTCAAATCGAAATAGGATTGCATTTTCAAGTCCCCGAAATGGTAATCATGGTTCAAGTTGGGCGAATATTCATGATGTGAAACAGGGGAGCCCAATTGAGATGTATGTTTCTCAAAGTCCGGTGAATAATTTACAGGAGCTTGTCAGGGATGATTTTCGTCATAACCATTATCACCCACAGAAGCAGGTGCCAATGCAAATTGACTTTTCAGGGACCACCTCAAGGCCTTCTGTCGTTTCCCGACCCATTGTTGTGGATTCTGAAAATTCAGATGCTGAAGCTCCATGCAAAGAAGACCAGCCAGGCACAGCTGATGAAAGGAGGCCGCGGAAAAGGGGTAGGAAGCCTGCAAATGGAAGAGAAGAACCACTCAATCATGTGGAGGCAGAGAGGCAGCGGCGTGAGAAGCTAAACCAGCGGTTTTATGCTTTAAGAGCTGTTGTTCCCAATATATCCAAGATGGACAAAGCATCCTTGTTGGGAGATGCCATTGCTTACATCAACGAGCTCCAGGCGAAGCTTAAAGTCATGGAAACAGAGAGGGAGAACCTCGGTGGCACTTCAAGAGATGTGTCAGCTTTGGGGGCTAGCTCAGGTATTGAAATTCAGAACCAGGCACCTGATGTCGATGTTCAAGCTGTTAACGATGAGGTTATCGTAAGGGTGAGCTGCCCTTTGGATTCACACCCTGCATCAAGAGTCATCGAAGCATTCAAAGAGGCACAAATCACAGTTGTTGAGTCAAAACTTGCAGCAGCAAACGATACTGTCTCCCATACTTTTGTAGTGAAGTCTCAAGGATCGGAGCAGTTGACAAAGGAGAAGTTGCTTGCAGCATTTTCCCGGGAATCCAACTCATTACAGTCATTGTCATCAGTCGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009892 GO:0010033 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048519 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

611

Amino Acids

67.49

Weight (kDa)

6.0

Isoelectric Point (pI)

51.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	53 - 241	7.5e-53	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	441 - 487	2.3e-12	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	524 - 596	1.4e-07	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011863)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01260 AT1G01260 AT1G01260
fragaria_vesca	FvH4_7g16800
malus_domestica	MD01G1082700.v1.1 MD07G1151000.v1.1
prunus_persica	Prupe.2G190100_v2.0.a1 Prupe.2G190100_v2.0.a1
pyrus_communis	pycom07g14930
rosa_chinensis	RchiOBHm_Chr1g0360001
rosa_laevigata	RLG00000027841
rosa_multiflora	Rmu_ssc0000368.1_g000016
rosa_roxburghii	Rroxscaffold_4G00296560
rosa_rugosa	Rorug01G0274500
rosa_samantha	Rh1AG288300 Rh1BG253800 Rh1CG271300 Rh1DG282900
rosa_wichuraiana	Rw1G025560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	752, 1123
Acc36I	ACCTGC	2 cut(s)	752, 1123
AccB1I	GGYRCC	2 cut(s)	1135, 1564
AccB7I	CCANNNNNTGG	1 cut(s)	228
AccII	CGCG	1 cut(s)	1276
AciI	CCGC	4 cut(s)	1274, 1276, 1345, 1366
AclWI	GGATC	2 cut(s)	183, 1756
AcsI	RAATTY	6 cut(s)	124, 154, 202, 615, 1213, 1551
AcuI	CTGAAG	1 cut(s)	1245
AfaI	GTAC	1 cut(s)	947
AfiI	CCNNNNNNNGG	8 cut(s)	228, 252, 363, 761, 776, 986, 1170, 1301
AflII	CTTAAG	1 cut(s)	742
AgsI	TTSAA	9 cut(s)	565, 659, 868, 975, 1002, 1512, 1550, 1583, 1663
AjnI	CCWGG	4 cut(s)	514, 1249, 1458, 1560
Alw21I	GWGCWC	4 cut(s)	107, 413, 433, 1458
Alw26I	GTCTC	2 cut(s)	1723, 1746
AlwI	GGATC	2 cut(s)	183, 1756
AlwNI	CAGNNNCTG	1 cut(s)	1223
Ama87I	CYCGRG	2 cut(s)	78, 1791
AoxI	GGCC	6 cut(s)	51, 747, 887, 932, 1172, 1271
ApeKI	GCWGC	7 cut(s)	62, 382, 1342, 1617, 1700, 1703, 1781
ApoI	RAATTY	6 cut(s)	124, 154, 202, 615, 1213, 1551
Asp700I	GAANNNNTTC	1 cut(s)	840
AspS9I	GGNCC	5 cut(s)	243, 354, 512, 747, 1161
AsuC2I	CCSGG	3 cut(s)	446, 1792, 1793
AsuHPI	GGTGA	5 cut(s)	287, 784, 1081, 1112, 1624
AsuNHI	GCTAGC	1 cut(s)	1535
AvaI	CYCGRG	2 cut(s)	78, 1791
AvaII	GGWCC	4 cut(s)	243, 354, 512, 1161
AxyI	CCTNAGG	1 cut(s)	297
BanI	GGYRCC	2 cut(s)	1135, 1564
BanII	GRGCYC	5 cut(s)	107, 413, 821, 1040, 1458
BauI	CACGAG	1 cut(s)	322
BbsI	GAAGAC	1 cut(s)	1248
Bbv12I	GWGCWC	4 cut(s)	107, 413, 433, 1458
BbvI	GCAGC	7 cut(s)	49, 369, 1354, 1604, 1712, 1715, 1793
BccI	CCATC	4 cut(s)	7, 272, 344, 1402
BceAI	ACGGC	1 cut(s)	919
BciT130I	CCWGG	4 cut(s)	516, 1251, 1460, 1562
BcnI	CCSGG	3 cut(s)	446, 1792, 1793
BcoDI	GTCTC	2 cut(s)	1723, 1746
BfaI	CTAG	2 cut(s)	240, 1536
BfmI	CTRYAG	2 cut(s)	63, 726
BfrI	CTTAAG	1 cut(s)	742
BfuAI	ACCTGC	2 cut(s)	752, 1123
BisI	GCNGC	9 cut(s)	63, 383, 1274, 1343, 1346, 1618, 1701, 1704, 1782
BlsI	GCNGC	9 cut(s)	64, 384, 1275, 1344, 1347, 1619, 1702, 1705, 1783
Bme1390I	CCNGG	7 cut(s)	446, 516, 1251, 1460, 1562, 1792, 1793
Bme18I	GGWCC	4 cut(s)	243, 354, 512, 1161
BmeT110I	CYCGRG	2 cut(s)	78, 1791
BmgT120I	GGNCC	5 cut(s)	243, 354, 512, 747, 1161
BmiI	GGNNCC	7 cut(s)	355, 356, 513, 1037, 1137, 1162, 1566
BmrFI	CCNGG	7 cut(s)	446, 516, 1251, 1460, 1562, 1792, 1793
BmsI	GCATC	7 cut(s)	206, 539, 665, 1210, 1423, 1427, 1649
BmtI	GCTAGC	1 cut(s)	1539
BpiI	GAAGAC	1 cut(s)	1248
BpmI	CTGGAG	1 cut(s)	1442
Bpu10I	CCTNAGC	1 cut(s)	1540
BpuEI	CTTGAG	3 cut(s)	365, 1153, 1728
BpuMI	CCSGG	3 cut(s)	446, 1792, 1793
BsaJI	CCNNGG	4 cut(s)	54, 1274, 1498, 1791
BsaWI	WCCGGW	1 cut(s)	1066
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 920, 950
Bsc4I	CCNNNNNNNGG	8 cut(s)	228, 252, 363, 761, 776, 986, 1170, 1301
Bse118I	RCCGGY	1 cut(s)	769
Bse1I	ACTGG	1 cut(s)	755
Bse21I	CCTNAGG	1 cut(s)	297
Bse3DI	GCAATG	1 cut(s)	1437
BseBI	CCWGG	4 cut(s)	516, 1251, 1460, 1562
BseDI	CCNNGG	4 cut(s)	54, 1274, 1498, 1791
BseGI	GGATG	4 cut(s)	355, 372, 1102, 1418
BseLI	CCNNNNNNNGG	8 cut(s)	228, 252, 363, 761, 776, 986, 1170, 1301
BseMI	GCAATG	1 cut(s)	1437
BseMII	CTCAG	4 cut(s)	426, 885, 894, 1554
BseNI	ACTGG	1 cut(s)	755
BseRI	GAGGAG	3 cut(s)	39, 516, 941
BseXI	GCAGC	7 cut(s)	49, 369, 1354, 1604, 1712, 1715, 1793
BseYI	CCCAGC	1 cut(s)	357
Bsh1236I	CGCG	1 cut(s)	1276
Bsh1285I	CGRYCG	1 cut(s)	593
BshFI	GGCC	6 cut(s)	53, 749, 889, 934, 1174, 1273
BshNI	GGYRCC	2 cut(s)	1135, 1564
BsiEI	CGRYCG	1 cut(s)	593
BsiHKAI	GWGCWC	4 cut(s)	107, 413, 433, 1458
BsiHKCI	CYCGRG	2 cut(s)	78, 1791
BsiSI	CCGG	5 cut(s)	445, 770, 886, 1067, 1792
BslFI	GGGAC	4 cut(s)	367, 620, 963, 1174
BslI	CCNNNNNNNGG	8 cut(s)	228, 252, 363, 761, 776, 986, 1170, 1301
BsmAI	GTCTC	2 cut(s)	1723, 1746
BsmFI	GGGAC	4 cut(s)	367, 620, 963, 1174
BsmI	GAATGC	1 cut(s)	1658
BsnI	GGCC	6 cut(s)	53, 749, 889, 934, 1174, 1273
BsoBI	CYCGRG	2 cut(s)	78, 1791
Bsp1286I	GDGCHC	6 cut(s)	107, 413, 433, 821, 1040, 1458
Bsp143I	GATC	3 cut(s)	175, 590, 1748
Bsp19I	CCATGG	1 cut(s)	54
BspACI	CCGC	4 cut(s)	1274, 1276, 1345, 1366
BspANI	GGCC	6 cut(s)	53, 749, 889, 934, 1174, 1273
BspCNI	CTCAG	4 cut(s)	425, 884, 893, 1553
BspFNI	CGCG	1 cut(s)	1276
BspHI	TCATGA	1 cut(s)	1018
BspLI	GGNNCC	7 cut(s)	355, 356, 513, 1037, 1137, 1162, 1566
BspMAI	CTGCAG	1 cut(s)	67
BspMI	ACCTGC	2 cut(s)	752, 1123
BspOI	GCTAGC	1 cut(s)	1539
BspPI	GGATC	2 cut(s)	183, 1756
BspT107I	GGYRCC	2 cut(s)	1135, 1564
BspTI	CTTAAG	1 cut(s)	742
BsrDI	GCAATG	1 cut(s)	1437
BsrFI	RCCGGY	1 cut(s)	769
BsrI	ACTGG	1 cut(s)	755
BssAI	RCCGGY	1 cut(s)	769
BssECI	CCNNGG	4 cut(s)	54, 1274, 1498, 1791
BssMI	GATC	3 cut(s)	175, 590, 1748
BssSI	CACGAG	1 cut(s)	322
BssT1I	CCWWGG	1 cut(s)	54
Bst2BI	CACGAG	1 cut(s)	322
Bst2UI	CCWGG	4 cut(s)	516, 1251, 1460, 1562
Bst4CI	ACNGT	4 cut(s)	720, 1681, 1717, 1812
Bst6I	CTCTTC	2 cut(s)	303, 1300
BstAFI	CTTAAG	1 cut(s)	742
BstC8I	GCNNGC	4 cut(s)	474, 1296, 1537, 1779
BstDEI	CTNAG	6 cut(s)	297, 338, 412, 871, 880, 1540
BstDSI	CCRYGG	2 cut(s)	54, 1274
BstF5I	GGATG	4 cut(s)	355, 372, 1102, 1418
BstFNI	CGCG	1 cut(s)	1276
BstKTI	GATC	3 cut(s)	178, 593, 1751
BstMAI	GTCTC	2 cut(s)	1723, 1746
BstMBI	GATC	3 cut(s)	175, 590, 1748
BstMCI	CGRYCG	1 cut(s)	593
BstMWI	GCNNNNNNNGC	8 cut(s)	59, 166, 547, 608, 1354, 1363, 1382, 1532
BstNI	CCWGG	4 cut(s)	516, 1251, 1460, 1562
BstNSI	RCATGY	1 cut(s)	545
BstSCI	CCNGG	7 cut(s)	444, 514, 1249, 1458, 1560, 1790, 1791
BstSFI	CTRYAG	2 cut(s)	63, 726
BstUI	CGCG	1 cut(s)	1276
BstV1I	GCAGC	7 cut(s)	49, 369, 1354, 1604, 1712, 1715, 1793
BstV2I	GAAGAC	1 cut(s)	1248
BstX2I	RGATCY	1 cut(s)	175
BstXI	CCANNNNNNTGG	2 cut(s)	757, 1201
BstYI	RGATCY	1 cut(s)	175
Bsu36I	CCTNAGG	1 cut(s)	297
BsuRI	GGCC	6 cut(s)	53, 749, 889, 934, 1174, 1273
BtgI	CCRYGG	2 cut(s)	54, 1274
BtgZI	GCGATG	1 cut(s)	954
BtsCI	GGATG	4 cut(s)	355, 372, 1102, 1418
BtsIMutI	CAGTG	4 cut(s)	450, 675, 716, 762
BveI	ACCTGC	2 cut(s)	752, 1123
Cac8I	GCNNGC	4 cut(s)	474, 1296, 1537, 1779
CaiI	CAGNNNCTG	1 cut(s)	1223
CciI	TCATGA	1 cut(s)	1018
Cfr10I	RCCGGY	1 cut(s)	769
Cfr13I	GGNCC	5 cut(s)	243, 354, 512, 747, 1161
Cfr42I	CCGCGG	1 cut(s)	1277
Cfr9I	CCCGGG	1 cut(s)	1791
CseI	GACGC	2 cut(s)	176, 465
Csp6I	GTAC	1 cut(s)	946
CviAII	CATG	7 cut(s)	55, 542, 995, 1019, 1233, 1325, 1477
CviQI	GTAC	1 cut(s)	946
DdeI	CTNAG	6 cut(s)	297, 338, 412, 871, 880, 1540
DpnI	GATC	3 cut(s)	177, 592, 1750
DpnII	GATC	3 cut(s)	175, 590, 1748
Eam1104I	CTCTTC	2 cut(s)	303, 1300
EarI	CTCTTC	2 cut(s)	303, 1300
Ecl136II	GAGCTC	3 cut(s)	105, 411, 1456
Eco130I	CCWWGG	1 cut(s)	54
Eco147I	AGGCCT	1 cut(s)	1174
Eco24I	GRGCYC	5 cut(s)	107, 413, 821, 1040, 1458
Eco47I	GGWCC	4 cut(s)	243, 354, 512, 1161
Eco53kI	GAGCTC	3 cut(s)	105, 411, 1456
Eco57I	CTGAAG	1 cut(s)	1245
Eco81I	CCTNAGG	1 cut(s)	297
Eco88I	CYCGRG	2 cut(s)	78, 1791
EcoICRI	GAGCTC	3 cut(s)	105, 411, 1456
EcoO109I	RGGNCCY	2 cut(s)	354, 512
EcoRI	GAATTC	2 cut(s)	124, 615
EcoRII	CCWGG	4 cut(s)	514, 1249, 1458, 1560
EcoT14I	CCWWGG	1 cut(s)	54
EcoT22I	ATGCAT	1 cut(s)	680
EcoT38I	GRGCYC	5 cut(s)	107, 413, 821, 1040, 1458
ErhI	CCWWGG	1 cut(s)	54
FaeI	CATG	7 cut(s)	58, 545, 998, 1022, 1236, 1328, 1480
FaqI	GGGAC	4 cut(s)	367, 620, 963, 1174
FatI	CATG	7 cut(s)	54, 541, 994, 1018, 1232, 1324, 1476
Fnu4HI	GCNGC	9 cut(s)	63, 383, 1274, 1343, 1346, 1618, 1701, 1704, 1782
FokI	GGATG	4 cut(s)	362, 379, 1109, 1405
FriOI	GRGCYC	5 cut(s)	107, 413, 821, 1040, 1458
Fsp4HI	GCNGC	9 cut(s)	63, 383, 1274, 1343, 1346, 1618, 1701, 1704, 1782
FspBI	CTAG	2 cut(s)	240, 1536
GluI	GCNGC	9 cut(s)	63, 383, 1274, 1343, 1346, 1618, 1701, 1704, 1782
GsaI	CCCAGC	1 cut(s)	361
GsuI	CTGGAG	1 cut(s)	1442
HaeIII	GGCC	6 cut(s)	53, 749, 889, 934, 1174, 1273
HapII	CCGG	5 cut(s)	445, 770, 886, 1067, 1792
HgaI	GACGC	2 cut(s)	176, 465
Hin1II	CATG	7 cut(s)	58, 545, 998, 1022, 1236, 1328, 1480
HincII	GTYRAC	2 cut(s)	1591, 1761
HindII	GTYRAC	2 cut(s)	1591, 1761
HindIII	AAGCTT	2 cut(s)	167, 1466
HinfI	GANTC	9 cut(s)	311, 328, 605, 731, 1205, 1628, 1647, 1688, 1796
HpaI	GTTAAC	1 cut(s)	1591
HpaII	CCGG	5 cut(s)	445, 770, 886, 1067, 1792
HphI	GGTGA	5 cut(s)	287, 784, 1081, 1112, 1624
Hpy166II	GTNNAC	3 cut(s)	946, 1591, 1761
Hpy188III	TCNNGA	4 cut(s)	1019, 1188, 1512, 1644
Hpy8I	GTNNAC	3 cut(s)	946, 1591, 1761
Hpy99I	CGWCG	1 cut(s)	481
HpyAV	CCTTC	3 cut(s)	500, 774, 1185
HpyCH4III	ACNGT	4 cut(s)	720, 1681, 1717, 1812
HpyF10VI	GCNNNNNNNGC	8 cut(s)	59, 166, 547, 608, 1354, 1363, 1382, 1532
HpyF3I	CTNAG	6 cut(s)	297, 338, 412, 871, 880, 1540
Hsp92II	CATG	7 cut(s)	58, 545, 998, 1022, 1236, 1328, 1480
KflI	GGGWCCC	1 cut(s)	354
KspAI	GTTAAC	1 cut(s)	1591
KspI	CCGCGG	1 cut(s)	1277
Kzo9I	GATC	3 cut(s)	175, 590, 1748
LmnI	GCTCC	8 cut(s)	184, 408, 685, 1035, 1084, 1234, 1461, 1753
Lsp1109I	GCAGC	7 cut(s)	49, 369, 1354, 1604, 1712, 1715, 1793
LweI	GCATC	7 cut(s)	206, 539, 665, 1210, 1423, 1427, 1649
MaeI	CTAG	2 cut(s)	240, 1536
MaeIII	GTNAC	3 cut(s)	390, 448, 714
MalI	GATC	3 cut(s)	177, 592, 1750
MboI	GATC	3 cut(s)	175, 590, 1748
MboII	GAAGA	9 cut(s)	16, 56, 105, 314, 320, 385, 1253, 1317, 1322
MfeI	CAATTG	1 cut(s)	1041
MflI	RGATCY	1 cut(s)	175
MhlI	GDGCHC	6 cut(s)	107, 413, 433, 821, 1040, 1458
MlyI	GAGTC	4 cut(s)	320, 740, 1656, 1697
MmeI	TCCRAC	4 cut(s)	555, 826, 903, 1824
Mph1103I	ATGCAT	1 cut(s)	680
MroXI	GAANNNNTTC	1 cut(s)	840
MseI	TTAA	4 cut(s)	743, 1379, 1470, 1590
MslI	CAYNNNNRTG	2 cut(s)	455, 1199
MspA1I	CMGCKG	4 cut(s)	1259, 1276, 1345, 1366
MspCI	CTTAAG	1 cut(s)	742
MspI	CCGG	5 cut(s)	445, 770, 886, 1067, 1792
MspR9I	CCNGG	7 cut(s)	446, 516, 1251, 1460, 1562, 1792, 1793
MunI	CAATTG	1 cut(s)	1041
Mva1269I	GAATGC	1 cut(s)	1658
MvaI	CCWGG	4 cut(s)	516, 1251, 1460, 1562
MvnI	CGCG	1 cut(s)	1276
MwoI	GCNNNNNNNGC	8 cut(s)	59, 166, 547, 608, 1354, 1363, 1382, 1532
NciI	CCSGG	3 cut(s)	446, 1792, 1793
NcoI	CCATGG	1 cut(s)	54
NdeII	GATC	3 cut(s)	175, 590, 1748
NheI	GCTAGC	1 cut(s)	1535
NlaIII	CATG	7 cut(s)	58, 545, 998, 1022, 1236, 1328, 1480
NlaIV	GGNNCC	7 cut(s)	355, 356, 513, 1037, 1137, 1162, 1566
NmuCI	GTSAC	2 cut(s)	448, 714
NsiI	ATGCAT	1 cut(s)	680
NspI	RCATGY	1 cut(s)	545
PaeR7I	CTCGAG	1 cut(s)	78
PagI	TCATGA	1 cut(s)	1018
PaqCI	CACCTGC	2 cut(s)	752, 1123
PceI	AGGCCT	1 cut(s)	1174
PcsI	WCGNNNNNNNCGW	1 cut(s)	113
PctI	GAATGC	1 cut(s)	1658
PdmI	GAANNNNTTC	1 cut(s)	840
PfeI	GAWTC	5 cut(s)	328, 605, 1205, 1628, 1796
PflFI	GACNNNGTC	1 cut(s)	446
PflMI	CCANNNNNTGG	1 cut(s)	228
PkrI	GCNGC	9 cut(s)	64, 384, 1275, 1344, 1347, 1619, 1702, 1705, 1783
Ple19I	CGATCG	1 cut(s)	593
PleI	GAGTC	4 cut(s)	319, 739, 1655, 1696
PpsI	GAGTC	4 cut(s)	319, 739, 1655, 1696
PpuMI	RGGWCCY	2 cut(s)	354, 512
Psp124BI	GAGCTC	3 cut(s)	107, 413, 1458
Psp5II	RGGWCCY	2 cut(s)	354, 512
Psp6I	CCWGG	4 cut(s)	514, 1249, 1458, 1560
PspFI	CCCAGC	1 cut(s)	357
PspGI	CCWGG	4 cut(s)	514, 1249, 1458, 1560
PspN4I	GGNNCC	7 cut(s)	355, 356, 513, 1037, 1137, 1162, 1566
PspPI	GGNCC	5 cut(s)	243, 354, 512, 747, 1161
PspPPI	RGGWCCY	2 cut(s)	354, 512
PspXI	VCTCGAGB	1 cut(s)	78
PsrI	GAACNNNNNNTAC	2 cut(s)	982, 1014
PstI	CTGCAG	1 cut(s)	67
PstNI	CAGNNNCTG	1 cut(s)	1223
PsuI	RGATCY	1 cut(s)	175
PsyI	GACNNNGTC	1 cut(s)	446
PvuI	CGATCG	1 cut(s)	593
PvuII	CAGCTG	1 cut(s)	1259
RsaI	GTAC	1 cut(s)	947
RsaNI	GTAC	1 cut(s)	946
RseI	CAYNNNNRTG	2 cut(s)	455, 1199
SacI	GAGCTC	3 cut(s)	107, 413, 1458
SacII	CCGCGG	1 cut(s)	1277
SaqAI	TTAA	4 cut(s)	743, 1379, 1470, 1590
SatI	GCNGC	9 cut(s)	63, 383, 1274, 1343, 1346, 1618, 1701, 1704, 1782
Sau3AI	GATC	3 cut(s)	175, 590, 1748
Sau96I	GGNCC	5 cut(s)	243, 354, 512, 747, 1161
SchI	GAGTC	4 cut(s)	320, 740, 1656, 1697
ScrFI	CCNGG	7 cut(s)	446, 516, 1251, 1460, 1562, 1792, 1793
SduI	GDGCHC	6 cut(s)	107, 413, 433, 821, 1040, 1458
SfaNI	GCATC	7 cut(s)	206, 539, 665, 1210, 1423, 1427, 1649
SfcI	CTRYAG	2 cut(s)	63, 726
Sfr274I	CTCGAG	1 cut(s)	78
Sfr303I	CCGCGG	1 cut(s)	1277
SgrBI	CCGCGG	1 cut(s)	1277
SinI	GGWCC	4 cut(s)	243, 354, 512, 1161
SlaI	CTCGAG	1 cut(s)	78
SmaI	CCCGGG	1 cut(s)	1793
SmiMI	CAYNNNNRTG	2 cut(s)	455, 1199
SmlI	CTYRAG	5 cut(s)	78, 344, 742, 1168, 1743
SmoI	CTYRAG	5 cut(s)	78, 344, 742, 1168, 1743
SseBI	AGGCCT	1 cut(s)	1174
SsiI	CCGC	4 cut(s)	1274, 1276, 1345, 1366
SspI	AATATT	1 cut(s)	1015
SspMI	CTAG	2 cut(s)	240, 1536
SstI	GAGCTC	3 cut(s)	107, 413, 1458
StuI	AGGCCT	1 cut(s)	1174
StyD4I	CCNGG	7 cut(s)	444, 514, 1249, 1458, 1560, 1790, 1791
StyI	CCWWGG	1 cut(s)	54
TaaI	ACNGT	4 cut(s)	720, 1681, 1717, 1812
TaqII	GACCGA	1 cut(s)	323
TatI	WGTACW	1 cut(s)	945
TauI	GCSGC	2 cut(s)	1276, 1348
TfiI	GAWTC	5 cut(s)	328, 605, 1205, 1628, 1796
Tru1I	TTAA	4 cut(s)	743, 1379, 1470, 1590
Tru9I	TTAA	4 cut(s)	743, 1379, 1470, 1590
TscAI	CASTG	4 cut(s)	457, 675, 723, 762
TseFI	GTSAC	2 cut(s)	448, 714
TseI	GCWGC	7 cut(s)	62, 382, 1342, 1617, 1700, 1703, 1781
Tsp45I	GTSAC	2 cut(s)	448, 714
TspDTI	ATGAA	7 cut(s)	17, 57, 321, 480, 807, 1007, 1278
TspMI	CCCGGG	1 cut(s)	1791
TspRI	CASTG	4 cut(s)	457, 675, 723, 762
Tth111I	GACNNNGTC	1 cut(s)	446
Van91I	CCANNNNNTGG	1 cut(s)	228
Vha464I	CTTAAG	1 cut(s)	742
VpaK11BI	GGWCC	4 cut(s)	243, 354, 512, 1161
XapI	RAATTY	6 cut(s)	124, 154, 202, 615, 1213, 1551
XceI	RCATGY	1 cut(s)	545
XhoI	CTCGAG	1 cut(s)	78
XmaI	CCCGGG	1 cut(s)	1791
XmnI	GAANNNNTTC	1 cut(s)	840
XspI	CTAG	2 cut(s)	240, 1536
Zsp2I	ATGCAT	1 cut(s)	680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.