Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0006210

Physical Location & Seq

Genomic Coordinates Forward (+)

52872 .. 57434

Gene Structure 4563 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1000700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGTGTTTAGTCGAATTGCCAACATCATTTCTTCTGCATCAAGTCGTTGGTCTAGCCCTCAGGGGGGTTCCAATCTATCTCCCCCCAAAATTGCCTTTGCCAACCCTGCACGGAGCAAGAACTATCTGCGTCTCTCATCATCTCTCCAGGATTTCTCGGCCTATCGCCAGATTGACCCTGAAGATCCCCATCCCAGCGTTGTCACTCATTCCAAACCCCCTGATTCCTTACAGAGAGAAACTGCCAACTCCAGCTTCTCAAAAGAGAAAGCACTGCCAGGAGGAGGAACCCCATCTGCCTGCAACAAGTGGGTTCGAGCCCTCATGCTTCTGTGTTGTATCTTGTTGTTGGGTTTTCTAATTTATTTGGTTTCCATGTTCACTTATTCTTATTGGTCTAGAGGAGAGCCCAAGTTCTATATTGTACTTGATTGTGGAAGTACTGGAACTCGTGTTTATGTATATCAAGCATCCTATGATACTGAGAAAGATGGCACTTTTCCTATTGTCATGAAGCCGTTAACACAAGGTCTTCGAAGAACATCTAATTCACACAGAGGCCGTGCTTATGATCGAATGGAAACTGAGCCCGGGCTTGACAAGTTGGTGCACAATGTTTCCGGCTTGAAGGCTGCAATAAAACCACTTATTCGATGGGCAGAGAAGCAAATCCCACAAAGGGCACATAAGACAACCTCGGTTTTCCTTTATGCTACTGCCGGGGTTCGCAGACTTCCTACTGTCGATTCACAGTGGCTTCTGGACAATGCATGGTCTATACTCAAGAATTCACCTTTTTTGTGCCAAAGAGACTGGGTTAAGATTATCAGTGGCTTGGAAGAAGCTTATTTCGGCTGGATAGCCCTTAACCATCACACGGGTATTCTGGGGGCCAAACCAAGAAAGCCAACATTTGGTGCACTTGACTTGGGTGGTTCATCACTGCAGGTTACATTTGAGAGTAATGAACAAGTGCATAAAGAGACCAGTTTAAACCTTAGAATTGGGGCCATGAACCATCATCTCACTGCATATTCTCTCCCAAGCTATGGTTTAAATGACGCATTCGATAAGTCTGTAGTACATCTTTTTGAGAGGCTTCCAGAAACCAGTAAGGCAGAACTAGTAAATGGGAAGGGAGAACTTCAGCATCCATGCTTGCAGTCCGGTTACAAGGAGCAATACGTTTGCTCTCAATGCGTTTCTAAATTCCAAGAAGGTGGAAGCCCTGTGATTGCTAAAAAGTGGTTGGATAAAGGAGGCAGATCAGGGATTTTGTTGCGGCTTATTGGTGCTCCAAATTGGGATGAGTGCAGTAAACTTGCCAGAGTTGCCGTCAATTTGTCGGAATGGTCCAATATAAATCCAGGAATTGACTGTGACTTGCAACCTTGTTCTCTTCCCAATGGTGTACCCCGTCCTTATGGAAGATTCTTTGTGATTTCCGGATTTTTTGTGGTTTATCGGTTTTTCAATTTGACGTCAGAGGCATCACTTGATGATGTGTTGGAAAAGGGTCGGGAGTTTTGTGAAAGAACTTGGGAAGTTGCAAAGAACAGTGTTGCTCCTCAGCCCTTCATTGAACAGTACTGCTTTAGGGCACCATATATTGTATTCTTGTTGAGAGAGGGATTGCACATCATAGATAATCAAGTTATAATTGGGTCTGGAAGTATTACATGGACACTTGGGGTTGCTTTGTTGGAAGCTGGGAAGGCACTTCCAACCAGAATGGGGCTTCACAGTTACGAAATACTCCAGTTCAAGATTAACCCAATATTTCTTACTGCAGTTTTGTTTATCTCTTTAATTTTCCTCCTTTGTGCATTATCATGTGTTGGCAATTGGATGCCAAAATTTTTCTGGAGGCCATGTCTCCCACTGTTTAGGACTAATGGTGCATCTTCTGGATCTGTTCTGAGTATTCCGTCTCCTTTTCGGTTCCAGCGCTGGAGTCCTATTAGCTCTGGGGATGGAAGAGCAAAGATGCCTCTGAGTCCAACAATTGCTGGTGATGCCCAAAGGAGACCATTTGGCTTAAGGCATAGTCTCAACAGCAGCAGTGACATCCAGTTAATGGAGTCTTCCTTATACCCATCAACTAGCAGTATGTCCCATAGTTATTCCTCTAATAATCTGGGCCAGATGCAACTGGACAGCATTAGCATGGGTTCCTTCTGGTCTCCTCACAGATCTCAGATGCGTCTTCAAAGCAGGCGATCACAATCTCGGGAAGACCTGAATTCTTCGCTGGCTGAGGCACACATGGTGAAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0007155 GO:0007275 GO:0007596 GO:0007599 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009611 GO:0009653 GO:0009791 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017110 GO:0017111 GO:0019439 GO:0022414 GO:0022607 GO:0022610 GO:0030198 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0034641 GO:0034655 GO:0034656 GO:0042060 GO:0043062 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044282 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046483 GO:0046700 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050817 GO:0050878 GO:0050896 GO:0055086 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:0090567 GO:0099402 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko05169 map00230 map00240 map05169

Pfam Domains

Protein Families

GDA1_CD39

Protein Analysis

760

Amino Acids

84.69

Weight (kDa)

9.29

Isoelectric Point (pI)

51.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDA1_CD39	PF01150	136 - 568	3.5e-56	GDA1/CD39 (nucleoside phosphatase) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006210)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19180 AT4G19180 AT4G19180
fragaria_vesca	FvH4_2g37270 FvH4_2g37270 FvH4_2g37270 FvH4_2g37270 FvH4_2g37270 FvH4_2g37270
malus_domestica	MD08G1000700.v1.1
prunus_persica	Prupe.1G352700_v2.0.a1 Prupe.1G352700_v2.0.a1 Prupe.1G352700_v2.0.a1 Prupe.1G352700_v2.0.a1
pyrus_communis	pycom08g00020
rosa_chinensis	RchiOBHm_Chr6g0304431
rosa_laevigata	RLG00000010979
rosa_multiflora	Rmu_ssc0000218.1_g000051
rosa_roxburghii	Rroxscaffold_7G00163740
rosa_rugosa	Rorug06G0331500 Rorug06G0331600 Rorug06G0331700
rosa_samantha	Rh6AG444400 Rh6BG458000 Rh6CG457200 Rh6DG443900
rosa_wichuraiana	Rw6G038580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1658
AatII	GACGTC	1 cut(s)	1484
Acc36I	ACCTGC	1 cut(s)	937
AccB1I	GGYRCC	1 cut(s)	1600
AccB7I	CCANNNNNTGG	3 cut(s)	914, 1049, 2077
AccIII	TCCGGA	1 cut(s)	1445
AciI	CCGC	1 cut(s)	1282
AclWI	GGATC	2 cut(s)	179, 1918
AcsI	RAATTY	5 cut(s)	787, 1208, 1856, 2242, 2274
AcuI	CTGAAG	2 cut(s)	201, 1130
AcyI	GRCGYC	1 cut(s)	1481
AdeI	CACNNNGTG	1 cut(s)	2269
AfaI	GTAC	5 cut(s)	426, 442, 1083, 1413, 1589
AfeI	AGCGCT	1 cut(s)	1949
AfiI	CCNNNNNNNGG	9 cut(s)	64, 65, 284, 679, 877, 914, 1049, 1734, 2077
AflII	CTTAAG	1 cut(s)	2038
AgsI	TTSAA	5 cut(s)	628, 1474, 1583, 1765, 2210
AhlI	ACTAGT	1 cut(s)	1123
AjnI	CCWGG	3 cut(s)	147, 277, 1366
AjuI	GAANNNNNNNTTGG	2 cut(s)	239, 271
AluBI	AGCT	5 cut(s)	255, 845, 1047, 1709, 1965
AluI	AGCT	5 cut(s)	255, 845, 1047, 1709, 1965
Alw21I	GWGCWC	3 cut(s)	612, 922, 1297
Alw26I	GTCTC	8 cut(s)	137, 804, 977, 1880, 1935, 2020, 2054, 2187
Alw44I	GTGCAC	2 cut(s)	608, 918
AlwI	GGATC	2 cut(s)	179, 1918
Ama87I	CYCGRG	2 cut(s)	590, 2229
Aor13HI	TCCGGA	1 cut(s)	1445
Aor51HI	AGCGCT	1 cut(s)	1949
AoxI	GGCC	6 cut(s)	159, 559, 891, 1008, 1868, 2140
ApaLI	GTGCAC	2 cut(s)	608, 918
ApeKI	GCWGC	2 cut(s)	632, 2058
ApoI	RAATTY	5 cut(s)	787, 1208, 1856, 2242, 2274
AspLEI	GCGC	1 cut(s)	1950
AspS9I	GGNCC	4 cut(s)	891, 1008, 1353, 2140
AsuC2I	CCSGG	3 cut(s)	591, 592, 721
AsuHPI	GGTGA	2 cut(s)	783, 2024
AsuII	TTCGAA	1 cut(s)	535
AvaI	CYCGRG	2 cut(s)	590, 2229
AvaII	GGWCC	1 cut(s)	1353
AxyI	CCTNAGG	1 cut(s)	60
BaeGI	GKGCMC	4 cut(s)	612, 685, 922, 1603
BanI	GGYRCC	1 cut(s)	1600
BanII	GRGCYC	3 cut(s)	322, 411, 591
BauI	CACGAG	1 cut(s)	450
BbsI	GAAGAC	4 cut(s)	524, 2076, 2198, 2241
Bbv12I	GWGCWC	3 cut(s)	612, 922, 1297
BbvCI	CCTCAGC	2 cut(s)	1569, 2256
BbvI	GCAGC	2 cut(s)	619, 2070
BccI	CCATC	8 cut(s)	198, 301, 485, 648, 879, 1026, 1967, 2104
BceAI	ACGGC	3 cut(s)	502, 546, 1319
BciT130I	CCWGG	3 cut(s)	149, 279, 1368
BcnI	CCSGG	3 cut(s)	591, 592, 721
BcoDI	GTCTC	8 cut(s)	137, 804, 977, 1880, 1935, 2020, 2054, 2187
BcuI	ACTAGT	1 cut(s)	1123
BfaI	CTAG	4 cut(s)	54, 399, 1124, 2103
BfmI	CTRYAG	3 cut(s)	944, 1077, 1788
BfoI	RGCGCY	1 cut(s)	1951
BfrI	CTTAAG	1 cut(s)	2038
BfuAI	ACCTGC	1 cut(s)	937
BglII	AGATCT	1 cut(s)	2192
BisI	GCNGC	3 cut(s)	633, 1283, 2059
BlsI	GCNGC	3 cut(s)	634, 1284, 2060
BmcAI	AGTACT	2 cut(s)	442, 1589
Bme1390I	CCNGG	6 cut(s)	149, 279, 591, 592, 721, 1368
Bme18I	GGWCC	1 cut(s)	1353
BmeT110I	CYCGRG	2 cut(s)	590, 2229
BmgT120I	GGNCC	4 cut(s)	891, 1008, 1353, 2140
BmiI	GGNNCC	7 cut(s)	70, 289, 892, 1009, 1602, 1943, 2173
BmrFI	CCNGG	6 cut(s)	149, 279, 591, 592, 721, 1368
BmrI	ACTGGG	1 cut(s)	823
BmuI	ACTGGG	1 cut(s)	823
BpiI	GAAGAC	4 cut(s)	524, 2076, 2198, 2241
BpmI	CTGGAG	5 cut(s)	131, 235, 1742, 1885, 1972
Bpu10I	CCTNAGC	2 cut(s)	1569, 2256
Bpu14I	TTCGAA	1 cut(s)	535
BpuEI	CTTGAG	1 cut(s)	767
BpuMI	CCSGG	3 cut(s)	591, 592, 721
BsaBI	GATNNNNATC	2 cut(s)	189, 2224
BsaHI	GRCGYC	1 cut(s)	1481
BsaI	GGTCTC	3 cut(s)	977, 2020, 2187
BsaJI	CCNNGG	3 cut(s)	590, 696, 720
BsaWI	WCCGGW	2 cut(s)	1166, 1445
BsaXI	ACNNNNNCTCC	2 cut(s)	1858, 1888
Bsc4I	CCNNNNNNNGG	9 cut(s)	64, 65, 284, 679, 877, 914, 1049, 1734, 2077
Bse1I	ACTGG	7 cut(s)	448, 818, 987, 1110, 1759, 2071, 2157
Bse21I	CCTNAGG	1 cut(s)	60
Bse8I	GATNNNNATC	2 cut(s)	189, 2224
BseAI	TCCGGA	1 cut(s)	1445
BseBI	CCWGG	3 cut(s)	149, 279, 1368
BseDI	CCNNGG	3 cut(s)	590, 696, 720
BseGI	GGATG	7 cut(s)	190, 470, 1150, 1312, 1854, 1978, 2067
BseJI	GATNNNNATC	2 cut(s)	189, 2224
BseLI	CCNNNNNNNGG	9 cut(s)	64, 65, 284, 679, 877, 914, 1049, 1734, 2077
BseMII	CTCAG	8 cut(s)	74, 474, 576, 1583, 1910, 1985, 2210, 2247
BseNI	ACTGG	7 cut(s)	448, 818, 987, 1110, 1759, 2071, 2157
BseRI	GAGGAG	4 cut(s)	297, 417, 1557, 2175
BseSI	GKGCMC	4 cut(s)	612, 685, 922, 1603
BseXI	GCAGC	2 cut(s)	619, 2070
BseYI	CCCAGC	2 cut(s)	194, 1709
BsgI	GTGCAG	2 cut(s)	93, 1333
BshFI	GGCC	6 cut(s)	161, 561, 893, 1010, 1870, 2142
BshNI	GGYRCC	1 cut(s)	1600
BsiHKAI	GWGCWC	3 cut(s)	612, 922, 1297
BsiHKCI	CYCGRG	2 cut(s)	590, 2229
BsiSI	CCGG	5 cut(s)	591, 621, 720, 1167, 1446
BslFI	GGGAC	1 cut(s)	2098
BslI	CCNNNNNNNGG	9 cut(s)	64, 65, 284, 679, 877, 914, 1049, 1734, 2077
BsmAI	GTCTC	8 cut(s)	137, 804, 977, 1880, 1935, 2020, 2054, 2187
BsmBI	CGTCTC	2 cut(s)	137, 1935
BsmFI	GGGAC	1 cut(s)	2098
BsmI	GAATGC	1 cut(s)	1064
BsnI	GGCC	6 cut(s)	161, 561, 893, 1010, 1870, 2142
Bso31I	GGTCTC	3 cut(s)	977, 2020, 2187
BsoBI	CYCGRG	2 cut(s)	590, 2229
Bsp119I	TTCGAA	1 cut(s)	535
Bsp1286I	GDGCHC	8 cut(s)	322, 411, 591, 612, 685, 922, 1297, 1603
Bsp13I	TCCGGA	1 cut(s)	1445
Bsp143I	GATC	6 cut(s)	184, 571, 1265, 1910, 2192, 2219
BspACI	CCGC	1 cut(s)	1282
BspANI	GGCC	6 cut(s)	161, 561, 893, 1010, 1870, 2142
BspCNI	CTCAG	8 cut(s)	73, 475, 577, 1582, 1911, 1986, 2209, 2248
BspEI	TCCGGA	1 cut(s)	1445
BspHI	TCATGA	1 cut(s)	510
BspLI	GGNNCC	7 cut(s)	70, 289, 892, 1009, 1602, 1943, 2173
BspMAI	CTGCAG	2 cut(s)	948, 1792
BspMI	ACCTGC	1 cut(s)	937
BspPI	GGATC	2 cut(s)	179, 1918
BspQI	GCTCTTC	1 cut(s)	1972
BspT104I	TTCGAA	1 cut(s)	535
BspT107I	GGYRCC	1 cut(s)	1600
BspTI	CTTAAG	1 cut(s)	2038
BspTNI	GGTCTC	3 cut(s)	977, 2020, 2187
BsrI	ACTGG	7 cut(s)	448, 818, 987, 1110, 1759, 2071, 2157
BssECI	CCNNGG	3 cut(s)	590, 696, 720
BssMI	GATC	6 cut(s)	184, 571, 1265, 1910, 2192, 2219
BssNI	GRCGYC	1 cut(s)	1481
BssSI	CACGAG	1 cut(s)	450
Bst2BI	CACGAG	1 cut(s)	450
Bst2UI	CCWGG	3 cut(s)	149, 279, 1368
Bst4CI	ACNGT	7 cut(s)	742, 753, 1379, 1559, 1587, 1745, 1884
Bst6I	CTCTTC	2 cut(s)	1404, 1972
BstACI	GRCGYC	1 cut(s)	1481
BstAFI	CTTAAG	1 cut(s)	2038
BstBI	TTCGAA	1 cut(s)	535
BstC8I	GCNNGC	4 cut(s)	301, 1160, 2216, 2253
BstDEI	CTNAG	9 cut(s)	60, 483, 585, 998, 1569, 1919, 1994, 2196, 2256
BstF5I	GGATG	7 cut(s)	190, 470, 1150, 1312, 1854, 1978, 2067
BstH2I	RGCGCY	1 cut(s)	1951
BstHHI	GCGC	1 cut(s)	1950
BstKTI	GATC	6 cut(s)	187, 574, 1268, 1913, 2195, 2222
BstMAI	GTCTC	8 cut(s)	137, 804, 977, 1880, 1935, 2020, 2054, 2187
BstMBI	GATC	6 cut(s)	184, 571, 1265, 1910, 2192, 2219
BstMWI	GCNNNNNNNGC	5 cut(s)	107, 1197, 1331, 1715, 2015
BstNI	CCWGG	3 cut(s)	149, 279, 1368
BstSCI	CCNGG	6 cut(s)	147, 277, 589, 590, 719, 1366
BstSFI	CTRYAG	3 cut(s)	944, 1077, 1788
BstSLI	GKGCMC	4 cut(s)	612, 685, 922, 1603
BstV1I	GCAGC	2 cut(s)	619, 2070
BstV2I	GAAGAC	4 cut(s)	524, 2076, 2198, 2241
BstX2I	RGATCY	3 cut(s)	184, 1910, 2192
BstXI	CCANNNNNNTGG	1 cut(s)	1220
BstYI	RGATCY	3 cut(s)	184, 1910, 2192
Bsu36I	CCTNAGG	1 cut(s)	60
BsuRI	GGCC	6 cut(s)	161, 561, 893, 1010, 1870, 2142
BtsCI	GGATG	7 cut(s)	190, 470, 1150, 1312, 1854, 1978, 2067
BtsI	GCAGTG	4 cut(s)	272, 941, 1026, 2068
BtsIMutI	CAGTG	8 cut(s)	272, 758, 835, 941, 1026, 1564, 1880, 2068
BveI	ACCTGC	1 cut(s)	937
Cac8I	GCNNGC	4 cut(s)	301, 1160, 2216, 2253
CciI	TCATGA	1 cut(s)	510
CfoI	GCGC	1 cut(s)	1950
Cfr13I	GGNCC	4 cut(s)	891, 1008, 1353, 2140
Cfr9I	CCCGGG	1 cut(s)	590
CseI	GACGC	3 cut(s)	119, 1070, 2192
Csp6I	GTAC	5 cut(s)	425, 441, 1082, 1412, 1588
CviQI	GTAC	5 cut(s)	425, 441, 1082, 1412, 1588
DdeI	CTNAG	9 cut(s)	60, 483, 585, 998, 1569, 1919, 1994, 2196, 2256
DpnI	GATC	6 cut(s)	186, 573, 1267, 1912, 2194, 2221
DpnII	GATC	6 cut(s)	184, 571, 1265, 1910, 2192, 2219
DraI	TTTAAA	2 cut(s)	993, 1056
DraIII	CACNNNGTG	1 cut(s)	2269
Eam1104I	CTCTTC	2 cut(s)	1404, 1972
EarI	CTCTTC	2 cut(s)	1404, 1972
Eco24I	GRGCYC	3 cut(s)	322, 411, 591
Eco31I	GGTCTC	3 cut(s)	977, 2020, 2187
Eco47I	GGWCC	1 cut(s)	1353
Eco47III	AGCGCT	1 cut(s)	1949
Eco57I	CTGAAG	2 cut(s)	201, 1130
Eco81I	CCTNAGG	1 cut(s)	60
Eco88I	CYCGRG	2 cut(s)	590, 2229
EcoRI	GAATTC	2 cut(s)	787, 2242
EcoRII	CCWGG	3 cut(s)	147, 277, 1366
EcoT22I	ATGCAT	1 cut(s)	772
EcoT38I	GRGCYC	3 cut(s)	322, 411, 591
Esp3I	CGTCTC	2 cut(s)	137, 1935
FaqI	GGGAC	1 cut(s)	2098
Fnu4HI	GCNGC	3 cut(s)	633, 1283, 2059
FokI	GGATG	7 cut(s)	177, 457, 1137, 1319, 1861, 1985, 2054
FriOI	GRGCYC	3 cut(s)	322, 411, 591
Fsp4HI	GCNGC	3 cut(s)	633, 1283, 2059
FspBI	CTAG	4 cut(s)	54, 399, 1124, 2103
GlaI	GCGC	1 cut(s)	1949
GluI	GCNGC	3 cut(s)	633, 1283, 2059
GsaI	CCCAGC	2 cut(s)	198, 1713
GsuI	CTGGAG	5 cut(s)	131, 235, 1742, 1885, 1972
HaeII	RGCGCY	1 cut(s)	1951
HaeIII	GGCC	6 cut(s)	161, 561, 893, 1010, 1870, 2142
HapII	CCGG	5 cut(s)	591, 621, 720, 1167, 1446
HgaI	GACGC	3 cut(s)	119, 1070, 2192
HhaI	GCGC	1 cut(s)	1950
Hin1I	GRCGYC	1 cut(s)	1481
Hin6I	GCGC	1 cut(s)	1948
HinP1I	GCGC	1 cut(s)	1948
HincII	GTYRAC	1 cut(s)	522
HindII	GTYRAC	1 cut(s)	522
HindIII	AAGCTT	1 cut(s)	843
HinfI	GANTC	6 cut(s)	224, 746, 1431, 1954, 1996, 2081
HpaI	GTTAAC	1 cut(s)	522
HpaII	CCGG	5 cut(s)	591, 621, 720, 1167, 1446
HphI	GGTGA	2 cut(s)	783, 2024
Hpy166II	GTNNAC	6 cut(s)	381, 522, 610, 920, 1319, 1412
Hpy188I	TCNGA	5 cut(s)	1348, 1486, 1920, 1995, 2199
Hpy8I	GTNNAC	6 cut(s)	381, 522, 610, 920, 1319, 1412
HpyAV	CCTTC	6 cut(s)	622, 1129, 1211, 1585, 1708, 2185
HpyCH4III	ACNGT	7 cut(s)	742, 753, 1379, 1559, 1587, 1745, 1884
HpyCH4IV	ACGT	2 cut(s)	1185, 1481
HpyF10VI	GCNNNNNNNGC	5 cut(s)	107, 1197, 1331, 1715, 2015
HpyF3I	CTNAG	9 cut(s)	60, 483, 585, 998, 1569, 1919, 1994, 2196, 2256
HpySE526I	ACGT	2 cut(s)	1185, 1481
Hsp92I	GRCGYC	1 cut(s)	1481
HspAI	GCGC	1 cut(s)	1948
Kpn2I	TCCGGA	1 cut(s)	1445
KspAI	GTTAAC	1 cut(s)	522
Kzo9I	GATC	6 cut(s)	184, 571, 1265, 1910, 2192, 2219
LguI	GCTCTTC	1 cut(s)	1972
LmnI	GCTCC	4 cut(s)	114, 1177, 1300, 1570
Lsp1109I	GCAGC	2 cut(s)	619, 2070
MaeI	CTAG	4 cut(s)	54, 399, 1124, 2103
MaeII	ACGT	2 cut(s)	1185, 1481
MaeIII	GTNAC	6 cut(s)	202, 949, 1169, 1379, 1745, 2063
MalI	GATC	6 cut(s)	186, 573, 1267, 1912, 2194, 2221
MboI	GATC	6 cut(s)	184, 571, 1265, 1910, 2192, 2219
MfeI	CAATTG	2 cut(s)	1843, 2004
MflI	RGATCY	3 cut(s)	184, 1910, 2192
MhlI	GDGCHC	8 cut(s)	322, 411, 591, 612, 685, 922, 1297, 1603
MlyI	GAGTC	3 cut(s)	1963, 2005, 2090
MmeI	TCCRAC	6 cut(s)	1230, 1326, 1488, 1683, 1748, 2024
Mph1103I	ATGCAT	1 cut(s)	772
MroI	TCCGGA	1 cut(s)	1445
MslI	CAYNNNNRTG	2 cut(s)	1831, 2165
MspCI	CTTAAG	1 cut(s)	2038
MspI	CCGG	5 cut(s)	591, 621, 720, 1167, 1446
MspR9I	CCNGG	6 cut(s)	149, 279, 591, 592, 721, 1368
MssI	GTTTAAAC	1 cut(s)	993
MunI	CAATTG	2 cut(s)	1843, 2004
Mva1269I	GAATGC	1 cut(s)	1064
MvaI	CCWGG	3 cut(s)	149, 279, 1368
MwoI	GCNNNNNNNGC	5 cut(s)	107, 1197, 1331, 1715, 2015
NciI	CCSGG	3 cut(s)	591, 592, 721
NdeII	GATC	6 cut(s)	184, 571, 1265, 1910, 2192, 2219
NlaIV	GGNNCC	7 cut(s)	70, 289, 892, 1009, 1602, 1943, 2173
NmeAIII	GCCGAG	1 cut(s)	137
NmuCI	GTSAC	3 cut(s)	202, 1379, 2063
NsiI	ATGCAT	1 cut(s)	772
NspV	TTCGAA	1 cut(s)	535
PagI	TCATGA	1 cut(s)	510
PciSI	GCTCTTC	1 cut(s)	1972
PctI	GAATGC	1 cut(s)	1064
PfeI	GAWTC	3 cut(s)	224, 746, 1431
PflMI	CCANNNNNTGG	3 cut(s)	914, 1049, 2077
PfoI	TCCNGGA	2 cut(s)	147, 1366
PkrI	GCNGC	3 cut(s)	634, 1284, 2060
PleI	GAGTC	3 cut(s)	1962, 2004, 2089
PmeI	GTTTAAAC	1 cut(s)	993
PpsI	GAGTC	3 cut(s)	1962, 2004, 2089
PsiI	TTATAA	1 cut(s)	1658
Psp6I	CCWGG	3 cut(s)	147, 277, 1366
PspFI	CCCAGC	2 cut(s)	194, 1709
PspGI	CCWGG	3 cut(s)	147, 277, 1366
PspN4I	GGNNCC	7 cut(s)	70, 289, 892, 1009, 1602, 1943, 2173
PspPI	GGNCC	4 cut(s)	891, 1008, 1353, 2140
PstI	CTGCAG	2 cut(s)	948, 1792
PsuI	RGATCY	3 cut(s)	184, 1910, 2192
RsaI	GTAC	5 cut(s)	426, 442, 1083, 1413, 1589
RsaNI	GTAC	5 cut(s)	425, 441, 1082, 1412, 1588
RseI	CAYNNNNRTG	2 cut(s)	1831, 2165
SapI	GCTCTTC	1 cut(s)	1972
SatI	GCNGC	3 cut(s)	633, 1283, 2059
Sau3AI	GATC	6 cut(s)	184, 571, 1265, 1910, 2192, 2219
Sau96I	GGNCC	4 cut(s)	891, 1008, 1353, 2140
ScaI	AGTACT	2 cut(s)	442, 1589
SchI	GAGTC	3 cut(s)	1963, 2005, 2090
ScrFI	CCNGG	6 cut(s)	149, 279, 591, 592, 721, 1368
SduI	GDGCHC	8 cut(s)	322, 411, 591, 612, 685, 922, 1297, 1603
SfcI	CTRYAG	3 cut(s)	944, 1077, 1788
SfuI	TTCGAA	1 cut(s)	535
SinI	GGWCC	1 cut(s)	1353
SmaI	CCCGGG	1 cut(s)	592
SmiMI	CAYNNNNRTG	2 cut(s)	1831, 2165
SmlI	CTYRAG	2 cut(s)	782, 2038
SmoI	CTYRAG	2 cut(s)	782, 2038
SpeI	ACTAGT	1 cut(s)	1123
SrfI	GCCCGGGC	1 cut(s)	592
SsiI	CCGC	1 cut(s)	1282
SspI	AATATT	1 cut(s)	1779
SspMI	CTAG	4 cut(s)	54, 399, 1124, 2103
StyD4I	CCNGG	6 cut(s)	147, 277, 589, 590, 719, 1366
TaaI	ACNGT	7 cut(s)	742, 753, 1379, 1559, 1587, 1745, 1884
TaiI	ACGT	2 cut(s)	1188, 1484
TaqI	TCGA	7 cut(s)	13, 316, 535, 574, 652, 744, 1068
TatI	WGTACW	4 cut(s)	424, 440, 1081, 1587
TauI	GCSGC	1 cut(s)	1285
TfiI	GAWTC	3 cut(s)	224, 746, 1431
TscAI	CASTG	8 cut(s)	279, 758, 835, 948, 1033, 1564, 1887, 2068
TseFI	GTSAC	3 cut(s)	202, 1379, 2063
TseI	GCWGC	2 cut(s)	632, 2058
Tsp45I	GTSAC	3 cut(s)	202, 1379, 2063
TspDTI	ATGAA	5 cut(s)	527, 927, 981, 1028, 1567
TspGWI	ACGGA	2 cut(s)	127, 1917
TspMI	CCCGGG	1 cut(s)	590
TspRI	CASTG	8 cut(s)	279, 758, 835, 948, 1033, 1564, 1887, 2068
Van91I	CCANNNNNTGG	3 cut(s)	914, 1049, 2077
Vha464I	CTTAAG	1 cut(s)	2038
VneI	GTGCAC	2 cut(s)	608, 918
VpaK11BI	GGWCC	1 cut(s)	1353
XapI	RAATTY	5 cut(s)	787, 1208, 1856, 2242, 2274
XbaI	TCTAGA	1 cut(s)	398
XcmI	CCANNNNNNNNNTGG	2 cut(s)	651, 1860
XmaI	CCCGGG	1 cut(s)	590
XspI	CTAG	4 cut(s)	54, 399, 1124, 2103
ZraI	GACGTC	1 cut(s)	1482
ZrmI	AGTACT	2 cut(s)	442, 1589
Zsp2I	ATGCAT	1 cut(s)	772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.