Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0006210

Physical Location & Seq

Genomic Coordinates Forward (+)

62673120 .. 62677640

Gene Structure 4521 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G038580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGGTGTTTAATCGAATTGCCAATTTCTTTGCTTCTCTATCGAGTCGTTGGTCTAGCCCTCAGGGTGGTTCCGCTGTATCGCCTCCCAAATCTGCTGCTCTTGCCTTTGCAAACACCGCACGCAACAAGAACCTTCTCAGACTCTCATCGTCTCTCCAGGATTTCTCATCTTATAGCCAGCTTGACATCGAAGATCCCAATATCGCAACTGTAACACATTCGAAACCCCCTCCTCATTCATTGCAGAGAGAAACTGCTGCTGCCTCCAGCTTTTCAAAGGAGAAATCACTGCCAGGAGGAGGAGGAGCCCCATTTTCGCGCAACAAGTGGGTACGAGCCTTCATGTTTCTTTGCTGTGTTTTGTTGGTTGGTTTTCTAGTTTATTTGGTTTCCATGTTGGTTTATTCGTACTGGTCTAAAGGAGAGCCCAAATTCTATATTGTGCTGGATTGTGGAAGTACTGGGACTAGAGTTTATGTATATCAGGCAACCTTGGACAACGAGAAAGATAACAGTTTTCCGATTGTCATGAAGTCATTAACAGAAGGTCTTCAAAGAAAACCTAAGGCTCACACAGGGCGAGCTTATGATCGGATGGAAACTGAGCCTGGGCTCGACAAGTTGGCGCACAATGTCTCGGGATTGAAGGTTGCAATAAAACCACTTGTTCAATGGGCAGAGAAGCAAATCCCAAAGAATGCACACAAGACAACCTCACTCTTCCTCTATGCAACTGCAGGGGTTCGTAGGCTGCCGAGTAATGATTCAAAATGGCTTCTAGATAATGCATGGTCTATACTCAAGAGTTCACCTTTCTTGTGCCAAAGAGATTGGGTTAGGACTATCAGTGGCCTGGAAGAAGCTTACTTTGGCTGGATAGCCCTTAACCATCATAGGGGTATGTTTGGGGCTGGACCTAGAAAGCCAACATTTGGTTCGCTTGACTTGGGTGGTTCATCACTGCAGGTTACATTTGAGAGTAATGAACATGTGCAAAAAGACACCAGTTTAAACATTAGAATTGGGGCTGTGAACCATCATCTCACTGCATATTCTCTCCCTGGTTATGGTTTAAATGATGCGTTTGACAAGTCTGTGGGTCGTCTCTTCGAGAGGCTTCCAGAAGTCAATAAAACAGAACTAGTGAATGGGAAGGGAGAACTTAAGCATCCGTGCCTGCAGTCTGGGTATAAGGAGCAATACATTTGCTCTCAATGTGTTTCGAAATTCCAAGAAGGCGGAAGCCCTGTGATTGCAAAAAAGAGTTTGGGCAAAGGAGGAAGATCAGGGGTTTCTCTGAAGCTCATCGGTGCTCCGAATTGGGAGGAGTGTGGTAAACTAGCAAGAGTTGCTGTTAATTTATCGGAATGGTCCAATATAACACCTGCACTCGATTGTGACGTGCAACCTTGTGCTCTTCCAGATGGTTTACCCCGACCTTATGGAAATTTTTATGCAATTTCAGGATTTTTTGTGGTTTATCGGTTTTTCAATTTGACTTCTGAGTCGTCACTGGATGATGTTTTGGAAAAGGGTCGGCAGTTTTGTGAAAGAACTTGGGAAGCTGCAAAGAAGAGTGTTGCTCCTCAGCCTTTCATTGAACAGTACTGTTTTAGGGCACCATATATTGCATTCTTGTTGAGGGAGGGCTTGCACATTATAGACAATCAAATCACCATTGGTTCTGGAAGTATCACGTGGACACAGGGGGTTGCTCTGCTGGAAGCTGGAAAGACACTCTCGACCGGACTGGGGTTTCGCAGTTACGAAGTACTCCGGATGAAAATAAACCCATTATTTCTTCTTTCAGTTTTGTTTATATCATTGATTTTACTCCTTTGTGCATTATCATGTATTGCCAATTGGATGCCAAAAATTTTCTGGAGGCCATATCTCCCGCTGTTTTGGACCAATAATGCCTCTTCTGCATCTGGTATTCCATCTCCTTTCCGGTTCCAGCGCTGGAGTCCTATTATTCCCGGGGATGGAAGAGTAAAGACGCCTCTAAGTCCAACAATTGCAGGTGGAGTCCAACAAAGACCATTTGGATTGGGACATGGTCTCAACAACAGTGGTGGAATCCAACTAATGGAGTCTTCCTTGTACCCATCAAGTAGCAGCATCTCCCATAGTTATTCGTCAAATAGCCTGGGCCAGATGCAATTTGACAGTAGTAGCATGGGCTCCTTCTGGTCTCCTCACAGATCTCAGATGCGTCTTCAAAGCAGGCGATCACAGTCTCGAGAAGACCTCAATTCTTCTCTGACTGAGGCACACATGGCAAAAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0007155 GO:0007275 GO:0007596 GO:0007599 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009611 GO:0009653 GO:0009791 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017110 GO:0017111 GO:0019439 GO:0022414 GO:0022607 GO:0022610 GO:0030198 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0034641 GO:0034655 GO:0034656 GO:0042060 GO:0043062 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044282 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046483 GO:0046700 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050817 GO:0050878 GO:0050896 GO:0055086 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:0090567 GO:0099402 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko05169 map00230 map00240 map05169

Pfam Domains

Protein Families

GDA1_CD39

Protein Analysis

763

Amino Acids

84.35

Weight (kDa)

9.4

Isoelectric Point (pI)

46.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDA1_CD39	PF01150	140 - 573	5e-53	GDA1/CD39 (nucleoside phosphatase) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006210)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19180 AT4G19180 AT4G19180
fragaria_vesca	FvH4_2g37270 FvH4_2g37270 FvH4_2g37270 FvH4_2g37270 FvH4_2g37270 FvH4_2g37270
malus_domestica	MD08G1000700.v1.1
prunus_persica	Prupe.1G352700_v2.0.a1 Prupe.1G352700_v2.0.a1 Prupe.1G352700_v2.0.a1 Prupe.1G352700_v2.0.a1
pyrus_communis	pycom08g00020
rosa_chinensis	RchiOBHm_Chr6g0304431
rosa_laevigata	RLG00000010979
rosa_multiflora	Rmu_ssc0000218.1_g000051
rosa_roxburghii	Rroxscaffold_7G00163740
rosa_rugosa	Rorug06G0331500 Rorug06G0331600 Rorug06G0331700
rosa_samantha	Rh6AG444400 Rh6BG458000 Rh6CG457200 Rh6DG443900
rosa_wichuraiana	Rw6G038580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1393, 2012
AasI	GACNNNNNNGTC	1 cut(s)	1504
Acc36I	ACCTGC	3 cut(s)	955, 1393, 2012
AccB1I	GGYRCC	1 cut(s)	1618
AccB7I	CCANNNNNTGG	2 cut(s)	932, 2089
AccII	CGCG	1 cut(s)	319
AccIII	TCCGGA	1 cut(s)	1776
AciI	CCGC	4 cut(s)	72, 117, 1239, 1898
AclWI	GGATC	1 cut(s)	188
AcsI	RAATTY	4 cut(s)	431, 1226, 1447, 1875
AcuI	CTGAAG	1 cut(s)	1319
AcvI	CACGTG	1 cut(s)	1698
AcyI	GRCGYC	1 cut(s)	2000
AfaI	GTAC	6 cut(s)	333, 410, 460, 1607, 1773, 2105
AfeI	AGCGCT	1 cut(s)	1961
AfiI	CCNNNNNNNGG	8 cut(s)	65, 299, 895, 932, 1067, 1752, 1985, 2089
AflII	CTTAAG	1 cut(s)	1163
AflIII	ACRYGT	1 cut(s)	988
AgsI	TTSAA	8 cut(s)	276, 554, 646, 671, 768, 1492, 1601, 2222
AhlI	ACTAGT	1 cut(s)	1141
AjiI	CACGTC	1 cut(s)	1402
AjnI	CCWGG	6 cut(s)	156, 292, 607, 852, 1060, 2148
AjuI	GAANNNNNNNTTGG	4 cut(s)	852, 884, 919, 951
AluBI	AGCT	7 cut(s)	181, 270, 584, 863, 1303, 1565, 1727
AluI	AGCT	7 cut(s)	181, 270, 584, 863, 1303, 1565, 1727
Alw21I	GWGCWC	2 cut(s)	1315, 1417
Alw26I	GTCTC	6 cut(s)	156, 640, 1109, 2066, 2199, 2244
AlwI	GGATC	1 cut(s)	188
Ama87I	CYCGRG	3 cut(s)	637, 1979, 2241
Aor13HI	TCCGGA	1 cut(s)	1776
Aor51HI	AGCGCT	1 cut(s)	1961
AoxI	GGCC	3 cut(s)	850, 1886, 2152
ApeKI	GCWGC	6 cut(s)	95, 257, 260, 751, 1565, 2118
ApoI	RAATTY	4 cut(s)	431, 1226, 1447, 1875
ArsI	GACNNNNNNTTYG	2 cut(s)	1740, 1772
Asp700I	GAANNNNTTC	1 cut(s)	549
AspLEI	GCGC	3 cut(s)	321, 628, 1962
AspS9I	GGNCC	4 cut(s)	914, 1371, 1908, 2152
AsuC2I	CCSGG	2 cut(s)	1980, 1981
AsuHPI	GGTGA	2 cut(s)	801, 1666
AsuII	TTCGAA	2 cut(s)	221, 1223
AvaI	CYCGRG	3 cut(s)	637, 1979, 2241
AvaII	GGWCC	3 cut(s)	914, 1371, 1908
AxyI	CCTNAGG	2 cut(s)	60, 564
BaeGI	GKGCMC	1 cut(s)	1621
BanI	GGYRCC	1 cut(s)	1618
BanII	GRGCYC	4 cut(s)	310, 429, 615, 2186
BbrPI	CACGTG	1 cut(s)	1698
BbsI	GAAGAC	4 cut(s)	542, 2088, 2210, 2253
Bbv12I	GWGCWC	2 cut(s)	1315, 1417
BbvCI	CCTCAGC	1 cut(s)	1587
BbvI	GCAGC	6 cut(s)	82, 244, 247, 738, 1552, 2130
BccI	CCATC	7 cut(s)	589, 897, 1044, 1418, 1948, 1979, 2116
BciT130I	CCWGG	6 cut(s)	158, 294, 609, 854, 1062, 2150
BcnI	CCSGG	2 cut(s)	1980, 1981
BcoDI	GTCTC	6 cut(s)	156, 640, 1109, 2066, 2199, 2244
BcuI	ACTAGT	1 cut(s)	1141
BfaI	CTAG	7 cut(s)	54, 377, 468, 779, 918, 1142, 1340
BfmI	CTRYAG	3 cut(s)	735, 962, 1178
BfoI	RGCGCY	1 cut(s)	1963
BfrI	CTTAAG	1 cut(s)	1163
BfuAI	ACCTGC	3 cut(s)	955, 1393, 2012
BglII	AGATCT	1 cut(s)	2204
BisI	GCNGC	6 cut(s)	96, 258, 261, 752, 1566, 2119
BlsI	GCNGC	6 cut(s)	97, 259, 262, 753, 1567, 2120
BmcAI	AGTACT	3 cut(s)	460, 1607, 1773
Bme1390I	CCNGG	8 cut(s)	158, 294, 609, 854, 1062, 1980, 1981, 2150
Bme18I	GGWCC	3 cut(s)	914, 1371, 1908
BmeT110I	CYCGRG	3 cut(s)	637, 1979, 2241
BmgBI	CACGTC	1 cut(s)	1402
BmgT120I	GGNCC	4 cut(s)	914, 1371, 1908, 2152
BmiI	GGNNCC	5 cut(s)	70, 307, 1620, 1955, 2185
BmrFI	CCNGG	8 cut(s)	158, 294, 609, 854, 1062, 1980, 1981, 2150
BmrI	ACTGGG	2 cut(s)	471, 1760
BmsI	GCATC	7 cut(s)	1069, 1177, 1857, 1937, 2130, 2148, 2202
BmuI	ACTGGG	2 cut(s)	471, 1760
BpiI	GAAGAC	4 cut(s)	542, 2088, 2210, 2253
BplI	GAGNNNNNCTC	4 cut(s)	1567, 1599, 2235, 2267
BpmI	CTGGAG	4 cut(s)	140, 250, 1903, 1984
Bpu10I	CCTNAGC	1 cut(s)	1587
Bpu14I	TTCGAA	2 cut(s)	221, 1223
BpuEI	CTTGAG	1 cut(s)	785
BpuMI	CCSGG	2 cut(s)	1980, 1981
BsaAI	YACGTR	1 cut(s)	1698
BsaHI	GRCGYC	1 cut(s)	2000
BsaI	GGTCTC	2 cut(s)	2066, 2199
BsaJI	CCNNGG	6 cut(s)	492, 608, 1060, 1979, 1980, 2149
BsaWI	WCCGGW	3 cut(s)	1745, 1776, 1950
Bsc4I	CCNNNNNNNGG	8 cut(s)	65, 299, 895, 932, 1067, 1752, 1985, 2089
Bse1I	ACTGG	5 cut(s)	416, 466, 1005, 1518, 1755
Bse21I	CCTNAGG	2 cut(s)	60, 564
Bse3DI	GCAATG	1 cut(s)	239
BseAI	TCCGGA	1 cut(s)	1776
BseBI	CCWGG	6 cut(s)	158, 294, 609, 854, 1062, 2150
BseDI	CCNNGG	6 cut(s)	492, 608, 1060, 1979, 1980, 2149
BseGI	GGATG	6 cut(s)	600, 1168, 1522, 1785, 1872, 1990
BseLI	CCNNNNNNNGG	8 cut(s)	65, 299, 895, 932, 1067, 1752, 1985, 2089
BseMI	GCAATG	1 cut(s)	239
BseMII	CTCAG	7 cut(s)	74, 151, 594, 1494, 1601, 2222, 2259
BseNI	ACTGG	5 cut(s)	416, 466, 1005, 1518, 1755
BseRI	GAGGAG	7 cut(s)	222, 312, 315, 318, 1340, 1575, 2187
BseSI	GKGCMC	1 cut(s)	1621
BseXI	GCAGC	6 cut(s)	82, 244, 247, 738, 1552, 2130
BsgI	GTGCAG	1 cut(s)	1371
Bsh1236I	CGCG	1 cut(s)	319
Bsh1285I	CGRYCG	1 cut(s)	1746
BshFI	GGCC	3 cut(s)	852, 1888, 2154
BshNI	GGYRCC	1 cut(s)	1618
BsiEI	CGRYCG	1 cut(s)	1746
BsiHKAI	GWGCWC	2 cut(s)	1315, 1417
BsiHKCI	CYCGRG	3 cut(s)	637, 1979, 2241
BsiSI	CCGG	4 cut(s)	1746, 1777, 1951, 1980
BslFI	GGGAC	2 cut(s)	478, 2067
BslI	CCNNNNNNNGG	8 cut(s)	65, 299, 895, 932, 1067, 1752, 1985, 2089
BsmAI	GTCTC	6 cut(s)	156, 640, 1109, 2066, 2199, 2244
BsmBI	CGTCTC	2 cut(s)	156, 1109
BsmFI	GGGAC	2 cut(s)	478, 2067
BsmI	GAATGC	2 cut(s)	703, 1631
BsnI	GGCC	3 cut(s)	852, 1888, 2154
Bso31I	GGTCTC	2 cut(s)	2066, 2199
BsoBI	CYCGRG	3 cut(s)	637, 1979, 2241
Bsp119I	TTCGAA	2 cut(s)	221, 1223
Bsp1286I	GDGCHC	7 cut(s)	310, 429, 615, 1315, 1417, 1621, 2186
Bsp13I	TCCGGA	1 cut(s)	1776
Bsp143I	GATC	5 cut(s)	193, 589, 1283, 2204, 2231
BspACI	CCGC	4 cut(s)	72, 117, 1239, 1898
BspANI	GGCC	3 cut(s)	852, 1888, 2154
BspCNI	CTCAG	7 cut(s)	73, 150, 595, 1495, 1600, 2221, 2260
BspEI	TCCGGA	1 cut(s)	1776
BspFNI	CGCG	1 cut(s)	319
BspHI	TCATGA	1 cut(s)	528
BspLI	GGNNCC	5 cut(s)	70, 307, 1620, 1955, 2185
BspMAI	CTGCAG	3 cut(s)	739, 966, 1182
BspMI	ACCTGC	3 cut(s)	955, 1393, 2012
BspPI	GGATC	1 cut(s)	188
BspQI	GCTCTTC	1 cut(s)	1422
BspT104I	TTCGAA	2 cut(s)	221, 1223
BspT107I	GGYRCC	1 cut(s)	1618
BspTI	CTTAAG	1 cut(s)	1163
BspTNI	GGTCTC	2 cut(s)	2066, 2199
BsrDI	GCAATG	1 cut(s)	239
BsrI	ACTGG	5 cut(s)	416, 466, 1005, 1518, 1755
BssECI	CCNNGG	6 cut(s)	492, 608, 1060, 1979, 1980, 2149
BssMI	GATC	5 cut(s)	193, 589, 1283, 2204, 2231
BssNI	GRCGYC	1 cut(s)	2000
BssT1I	CCWWGG	1 cut(s)	492
Bst2UI	CCWGG	6 cut(s)	158, 294, 609, 854, 1062, 2150
Bst4CI	ACNGT	7 cut(s)	211, 515, 1605, 1610, 2072, 2171, 2238
Bst6I	CTCTTC	6 cut(s)	725, 1112, 1422, 1568, 1927, 1984
BstACI	GRCGYC	1 cut(s)	2000
BstAFI	CTTAAG	1 cut(s)	1163
BstAPI	GCANNNNNTGC	1 cut(s)	1349
BstBAI	YACGTR	1 cut(s)	1698
BstBI	TTCGAA	2 cut(s)	221, 1223
BstC8I	GCNNGC	6 cut(s)	121, 179, 582, 1178, 1652, 2228
BstDEI	CTNAG	9 cut(s)	60, 137, 564, 603, 1503, 1587, 2006, 2208, 2268
BstF5I	GGATG	6 cut(s)	600, 1168, 1522, 1785, 1872, 1990
BstFNI	CGCG	1 cut(s)	319
BstH2I	RGCGCY	1 cut(s)	1963
BstHHI	GCGC	3 cut(s)	321, 628, 1962
BstKTI	GATC	5 cut(s)	196, 592, 1286, 2207, 2234
BstMAI	GTCTC	6 cut(s)	156, 640, 1109, 2066, 2199, 2244
BstMBI	GATC	5 cut(s)	193, 589, 1283, 2204, 2231
BstMCI	CGRYCG	1 cut(s)	1746
BstMWI	GCNNNNNNNGC	5 cut(s)	101, 116, 1349, 1925, 2279
BstNI	CCWGG	6 cut(s)	158, 294, 609, 854, 1062, 2150
BstNSI	RCATGY	1 cut(s)	992
BstSCI	CCNGG	8 cut(s)	156, 292, 607, 852, 1060, 1978, 1979, 2148
BstSFI	CTRYAG	3 cut(s)	735, 962, 1178
BstSLI	GKGCMC	1 cut(s)	1621
BstUI	CGCG	1 cut(s)	319
BstV1I	GCAGC	6 cut(s)	82, 244, 247, 738, 1552, 2130
BstV2I	GAAGAC	4 cut(s)	542, 2088, 2210, 2253
BstX2I	RGATCY	2 cut(s)	193, 2204
BstYI	RGATCY	2 cut(s)	193, 2204
Bsu36I	CCTNAGG	2 cut(s)	60, 564
BsuRI	GGCC	3 cut(s)	852, 1888, 2154
BtrI	CACGTC	1 cut(s)	1402
BtsCI	GGATG	6 cut(s)	600, 1168, 1522, 1785, 1872, 1990
BtsI	GCAGTG	3 cut(s)	287, 959, 1044
BtsIMutI	CAGTG	6 cut(s)	287, 853, 959, 1044, 1511, 2077
BveI	ACCTGC	3 cut(s)	955, 1393, 2012
Cac8I	GCNNGC	6 cut(s)	121, 179, 582, 1178, 1652, 2228
CciI	TCATGA	1 cut(s)	528
CfoI	GCGC	3 cut(s)	321, 628, 1962
Cfr13I	GGNCC	4 cut(s)	914, 1371, 1908, 2152
Cfr9I	CCCGGG	1 cut(s)	1979
CseI	GACGC	2 cut(s)	2008, 2204
Csp6I	GTAC	6 cut(s)	332, 409, 459, 1606, 1772, 2104
CspCI	CAANNNNNGTGG	4 cut(s)	2053, 2056, 2088, 2091
CviAII	CATG	9 cut(s)	343, 394, 529, 789, 989, 1851, 2057, 2179, 2278
CviQI	GTAC	6 cut(s)	332, 409, 459, 1606, 1772, 2104
DdeI	CTNAG	9 cut(s)	60, 137, 564, 603, 1503, 1587, 2006, 2208, 2268
DpnI	GATC	5 cut(s)	195, 591, 1285, 2206, 2233
DpnII	GATC	5 cut(s)	193, 589, 1283, 2204, 2231
DraI	TTTAAA	2 cut(s)	1011, 1074
DrdI	GACNNNNNNGTC	1 cut(s)	1504
DseDI	GACNNNNNNGTC	1 cut(s)	1504
Eam1104I	CTCTTC	6 cut(s)	725, 1112, 1422, 1568, 1927, 1984
EarI	CTCTTC	6 cut(s)	725, 1112, 1422, 1568, 1927, 1984
EciI	GGCGGA	1 cut(s)	1254
Eco130I	CCWWGG	1 cut(s)	492
Eco24I	GRGCYC	4 cut(s)	310, 429, 615, 2186
Eco31I	GGTCTC	2 cut(s)	2066, 2199
Eco47I	GGWCC	3 cut(s)	914, 1371, 1908
Eco47III	AGCGCT	1 cut(s)	1961
Eco57I	CTGAAG	1 cut(s)	1319
Eco72I	CACGTG	1 cut(s)	1698
Eco81I	CCTNAGG	2 cut(s)	60, 564
Eco88I	CYCGRG	3 cut(s)	637, 1979, 2241
EcoRII	CCWGG	6 cut(s)	156, 292, 607, 852, 1060, 2148
EcoT14I	CCWWGG	1 cut(s)	492
EcoT22I	ATGCAT	1 cut(s)	790
EcoT38I	GRGCYC	4 cut(s)	310, 429, 615, 2186
ErhI	CCWWGG	1 cut(s)	492
Esp3I	CGTCTC	2 cut(s)	156, 1109
FaeI	CATG	9 cut(s)	346, 397, 532, 792, 992, 1854, 2060, 2182, 2281
FaqI	GGGAC	2 cut(s)	478, 2067
FatI	CATG	9 cut(s)	342, 393, 528, 788, 988, 1850, 2056, 2178, 2277
FauI	CCCGC	1 cut(s)	1905
Fnu4HI	GCNGC	6 cut(s)	96, 258, 261, 752, 1566, 2119
FokI	GGATG	6 cut(s)	607, 1155, 1529, 1792, 1879, 1997
FriOI	GRGCYC	4 cut(s)	310, 429, 615, 2186
Fsp4HI	GCNGC	6 cut(s)	96, 258, 261, 752, 1566, 2119
FspBI	CTAG	7 cut(s)	54, 377, 468, 779, 918, 1142, 1340
GlaI	GCGC	3 cut(s)	320, 627, 1961
GluI	GCNGC	6 cut(s)	96, 258, 261, 752, 1566, 2119
GsuI	CTGGAG	4 cut(s)	140, 250, 1903, 1984
HaeII	RGCGCY	1 cut(s)	1963
HaeIII	GGCC	3 cut(s)	852, 1888, 2154
HapII	CCGG	4 cut(s)	1746, 1777, 1951, 1980
HgaI	GACGC	2 cut(s)	2008, 2204
HhaI	GCGC	3 cut(s)	321, 628, 1962
Hin1I	GRCGYC	1 cut(s)	2000
Hin1II	CATG	9 cut(s)	346, 397, 532, 792, 992, 1854, 2060, 2182, 2281
Hin6I	GCGC	3 cut(s)	319, 626, 1960
HinP1I	GCGC	3 cut(s)	319, 626, 1960
HindIII	AAGCTT	1 cut(s)	861
HinfI	GANTC	8 cut(s)	43, 141, 764, 1505, 1966, 2028, 2079, 2093
HpaII	CCGG	4 cut(s)	1746, 1777, 1951, 1980
HphI	GGTGA	2 cut(s)	801, 1666
Hpy166II	GTNNAC	5 cut(s)	809, 1033, 1337, 1430, 1701
Hpy188I	TCNGA	9 cut(s)	140, 522, 594, 1299, 1317, 1366, 1504, 2211, 2265
Hpy8I	GTNNAC	5 cut(s)	809, 1033, 1337, 1430, 1701
HpyAV	CCTTC	7 cut(s)	143, 349, 539, 640, 1147, 1229, 2197
HpyCH4III	ACNGT	7 cut(s)	211, 515, 1605, 1610, 2072, 2171, 2238
HpyCH4IV	ACGT	2 cut(s)	1401, 1697
HpyF10VI	GCNNNNNNNGC	5 cut(s)	101, 116, 1349, 1925, 2279
HpyF3I	CTNAG	9 cut(s)	60, 137, 564, 603, 1503, 1587, 2006, 2208, 2268
HpySE526I	ACGT	2 cut(s)	1401, 1697
Hsp92I	GRCGYC	1 cut(s)	2000
Hsp92II	CATG	9 cut(s)	346, 397, 532, 792, 992, 1854, 2060, 2182, 2281
HspAI	GCGC	3 cut(s)	319, 626, 1960
Kpn2I	TCCGGA	1 cut(s)	1776
Kzo9I	GATC	5 cut(s)	193, 589, 1283, 2204, 2231
LguI	GCTCTTC	1 cut(s)	1422
LmnI	GCTCC	5 cut(s)	305, 1195, 1318, 1588, 2189
Lsp1109I	GCAGC	6 cut(s)	82, 244, 247, 738, 1552, 2130
LweI	GCATC	7 cut(s)	1069, 1177, 1857, 1937, 2130, 2148, 2202
MaeI	CTAG	7 cut(s)	54, 377, 468, 779, 918, 1142, 1340
MaeII	ACGT	2 cut(s)	1401, 1697
MaeIII	GTNAC	5 cut(s)	211, 967, 1397, 1509, 1763
MalI	GATC	5 cut(s)	195, 591, 1285, 2206, 2233
MboI	GATC	5 cut(s)	193, 589, 1283, 2204, 2231
MfeI	CAATTG	2 cut(s)	1861, 2016
MflI	RGATCY	2 cut(s)	193, 2204
MhlI	GDGCHC	7 cut(s)	310, 429, 615, 1315, 1417, 1621, 2186
MlyI	GAGTC	6 cut(s)	52, 135, 1514, 1975, 2037, 2102
MmeI	TCCRAC	3 cut(s)	2036, 2056, 2107
Mph1103I	ATGCAT	1 cut(s)	790
MroI	TCCGGA	1 cut(s)	1776
MroXI	GAANNNNTTC	1 cut(s)	549
MseI	TTAA	7 cut(s)	9, 539, 885, 1010, 1073, 1164, 1356
MslI	CAYNNNNRTG	1 cut(s)	1849
MspA1I	CMGCKG	2 cut(s)	74, 1900
MspCI	CTTAAG	1 cut(s)	1163
MspI	CCGG	4 cut(s)	1746, 1777, 1951, 1980
MspR9I	CCNGG	8 cut(s)	158, 294, 609, 854, 1062, 1980, 1981, 2150
MssI	GTTTAAAC	1 cut(s)	1011
MunI	CAATTG	2 cut(s)	1861, 2016
Mva1269I	GAATGC	2 cut(s)	703, 1631
MvaI	CCWGG	6 cut(s)	158, 294, 609, 854, 1062, 2150
MvnI	CGCG	1 cut(s)	319
MwoI	GCNNNNNNNGC	5 cut(s)	101, 116, 1349, 1925, 2279
NciI	CCSGG	2 cut(s)	1980, 1981
NdeII	GATC	5 cut(s)	193, 589, 1283, 2204, 2231
NlaIII	CATG	9 cut(s)	346, 397, 532, 792, 992, 1854, 2060, 2182, 2281
NlaIV	GGNNCC	5 cut(s)	70, 307, 1620, 1955, 2185
NmeAIII	GCCGAG	1 cut(s)	780
NmuCI	GTSAC	2 cut(s)	1397, 1509
NsiI	ATGCAT	1 cut(s)	790
NspI	RCATGY	1 cut(s)	992
NspV	TTCGAA	2 cut(s)	221, 1223
PaeR7I	CTCGAG	1 cut(s)	2241
PagI	TCATGA	1 cut(s)	528
PaqCI	CACCTGC	2 cut(s)	1393, 2012
PciI	ACATGT	1 cut(s)	988
PciSI	GCTCTTC	1 cut(s)	1422
PcsI	WCGNNNNNNNCGW	1 cut(s)	1398
PctI	GAATGC	2 cut(s)	703, 1631
PdmI	GAANNNNTTC	1 cut(s)	549
PfeI	GAWTC	2 cut(s)	764, 2079
PflFI	GACNNNGTC	1 cut(s)	2058
PflMI	CCANNNNNTGG	2 cut(s)	932, 2089
PfoI	TCCNGGA	1 cut(s)	156
PkrI	GCNGC	6 cut(s)	97, 259, 262, 753, 1567, 2120
PleI	GAGTC	6 cut(s)	51, 135, 1513, 1974, 2036, 2101
PmaCI	CACGTG	1 cut(s)	1698
PmeI	GTTTAAAC	1 cut(s)	1011
PmlI	CACGTG	1 cut(s)	1698
PpsI	GAGTC	6 cut(s)	51, 135, 1513, 1974, 2036, 2101
Ppu21I	YACGTR	1 cut(s)	1698
PscI	ACATGT	1 cut(s)	988
Psp6I	CCWGG	6 cut(s)	156, 292, 607, 852, 1060, 2148
PspCI	CACGTG	1 cut(s)	1698
PspGI	CCWGG	6 cut(s)	156, 292, 607, 852, 1060, 2148
PspN4I	GGNNCC	5 cut(s)	70, 307, 1620, 1955, 2185
PspPI	GGNCC	4 cut(s)	914, 1371, 1908, 2152
PstI	CTGCAG	3 cut(s)	739, 966, 1182
PsuI	RGATCY	2 cut(s)	193, 2204
PsyI	GACNNNGTC	1 cut(s)	2058
RsaI	GTAC	6 cut(s)	333, 410, 460, 1607, 1773, 2105
RsaNI	GTAC	6 cut(s)	332, 409, 459, 1606, 1772, 2104
RseI	CAYNNNNRTG	1 cut(s)	1849
SapI	GCTCTTC	1 cut(s)	1422
SaqAI	TTAA	7 cut(s)	9, 539, 885, 1010, 1073, 1164, 1356
SatI	GCNGC	6 cut(s)	96, 258, 261, 752, 1566, 2119
Sau3AI	GATC	5 cut(s)	193, 589, 1283, 2204, 2231
Sau96I	GGNCC	4 cut(s)	914, 1371, 1908, 2152
ScaI	AGTACT	3 cut(s)	460, 1607, 1773
SchI	GAGTC	6 cut(s)	52, 135, 1514, 1975, 2037, 2102
ScrFI	CCNGG	8 cut(s)	158, 294, 609, 854, 1062, 1980, 1981, 2150
SduI	GDGCHC	7 cut(s)	310, 429, 615, 1315, 1417, 1621, 2186
SfaNI	GCATC	7 cut(s)	1069, 1177, 1857, 1937, 2130, 2148, 2202
SfcI	CTRYAG	3 cut(s)	735, 962, 1178
Sfr274I	CTCGAG	1 cut(s)	2241
SfuI	TTCGAA	2 cut(s)	221, 1223
SinI	GGWCC	3 cut(s)	914, 1371, 1908
SlaI	CTCGAG	1 cut(s)	2241
SmaI	CCCGGG	1 cut(s)	1981
SmiMI	CAYNNNNRTG	1 cut(s)	1849
SmlI	CTYRAG	3 cut(s)	800, 1163, 2241
SmoI	CTYRAG	3 cut(s)	800, 1163, 2241
SpeI	ACTAGT	1 cut(s)	1141
SsiI	CCGC	4 cut(s)	72, 117, 1239, 1898
SspMI	CTAG	7 cut(s)	54, 377, 468, 779, 918, 1142, 1340
StyD4I	CCNGG	8 cut(s)	156, 292, 607, 852, 1060, 1978, 1979, 2148
StyI	CCWWGG	1 cut(s)	492
TaaI	ACNGT	7 cut(s)	211, 515, 1605, 1610, 2072, 2171, 2238
TaiI	ACGT	2 cut(s)	1404, 1700
TatI	WGTACW	3 cut(s)	458, 1605, 1771
TfiI	GAWTC	2 cut(s)	764, 2079
Tru1I	TTAA	7 cut(s)	9, 539, 885, 1010, 1073, 1164, 1356
Tru9I	TTAA	7 cut(s)	9, 539, 885, 1010, 1073, 1164, 1356
TscAI	CASTG	6 cut(s)	294, 853, 966, 1051, 1518, 2077
TseFI	GTSAC	2 cut(s)	1397, 1509
TseI	GCWGC	6 cut(s)	95, 257, 260, 751, 1565, 2118
Tsp45I	GTSAC	2 cut(s)	1397, 1509
TspDTI	ATGAA	7 cut(s)	228, 331, 545, 945, 999, 1585, 1796
TspGWI	ACGGA	1 cut(s)	1161
TspMI	CCCGGG	1 cut(s)	1979
TspRI	CASTG	6 cut(s)	294, 853, 966, 1051, 1518, 2077
Tth111I	GACNNNGTC	1 cut(s)	2058
Van91I	CCANNNNNTGG	2 cut(s)	932, 2089
Vha464I	CTTAAG	1 cut(s)	1163
VpaK11BI	GGWCC	3 cut(s)	914, 1371, 1908
XapI	RAATTY	4 cut(s)	431, 1226, 1447, 1875
XbaI	TCTAGA	1 cut(s)	778
XceI	RCATGY	1 cut(s)	992
XcmI	CCANNNNNNNNNTGG	2 cut(s)	669, 1878
XhoI	CTCGAG	1 cut(s)	2241
XmaI	CCCGGG	1 cut(s)	1979
XmnI	GAANNNNTTC	1 cut(s)	549
XspI	CTAG	7 cut(s)	54, 377, 468, 779, 918, 1142, 1340
ZrmI	AGTACT	3 cut(s)	460, 1607, 1773
Zsp2I	ATGCAT	1 cut(s)	790

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.