Prupe.1G352700_v2.0.a1

Belongs to the GDA1 CD39 NTPase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
32792320 .. 32797697
5378 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G352700.3

Sequence Viewer

Length: 2295 bp
ATGGTGTTTAGTCGAATTGCCGATATAATTTCTTCTGCATCAAGTCGTTGGTCTAATCCTCAGGGTTCCACTGTATCTTCTCCTCCCAAAACGTGTGCCCATGCTTTTGCCTTTGCTAACCCTGCACGCAACAAGAACCATCTTCGACTCTCATCATCTCTCCAGGATTTCTCCTCTTATCATCAGCTCGATCCTGAAGATCCCCATCCCAGCATTGTGGCCCATTCCAAACACCCTCATTCCTTAGAGAGAGAAACTGCTGCCTCCAGCTTCTCAAAGGAGAAAGGACTGCCAGGAGGAGGAGTCCTACCTGCCTGCAACAAGTTGGTTCGAGCCCTGATGCTTCTGTGTTGTATCTTGTTGTTCGGTTTTCTAATTTATTTGATTTCCATGTTCATTTATTCTTATTGGTCTAAAGGAACTCCCAAATTTTATATTGTGCTTGATTGTGGAAGTACTGGAACTCGAGTTTATGTATATCAAGCATCCTTTGATAATGCAAACGATGGCACTTTTCCTATTGCCATGAAGCCATTAACGGAAGGTCTTCAAAGAAAACCTAATTCACACACTGGTCGAGCTTATGATCGAATGGAAACTGAGCCTGGGCTTGACAAGTTGGTTCATAACGTTTCGGGCTTGAAGGCTGCAATAAAACCACTTATTCGATGGGCAGAGAAGCAAATCCCAGAGAAGGCGCATAAAACAACCTCGCTTTTCCTTTATGCTACTGCAGGGGTTCGCAGACTGCCGAGTGTCGATTCAAAGTGGCTTCTAGACAATGCATGGTCTATACTCAAGAATTCACCTTTCTTGTGCCAAAGAGACTGGGTTAAGATTATCAGTGGCCTAGAAGAAGCGTACTTTGGTTGGATAGCCCTCAACCATCATACGGGCATGCTGGGGGCCAGACCAAGAAAGCCAACATTTGGTGCACTTGACTTGGGTGGTTCATCGCTGCAGGTTACATTTGAGAGTAATGAACATGTGCGTAACGAGACCAGTTTAAACCTTAGAATTGGGGCTGTGAACCATCATCTCACTGCATATTCTCTCCCGAGCTATGGTTTAAATGATGCATTTGACAAGTCTGTGGTTCATCTTTTGGAGAAGCTTCCAGAAATCACCAAGGCAGAACTAGTAAATGGGAAGGGAAAACTTAGGCACCCCTGCTTGCATTCCGGATACAAGGAGAAATATGTTTGTTCTGAATGTGTTTCTAAATTCCAAGAAGGTGGAAGCCCTGTGATTGCAAAAACGAGTTTGGGCAAAGGAGGAAGATCAGGGATTTCCGTGATGCTTAGTGGTGCTCCAAATTGGGATGAATGCAGTAAACTTGCAAGAATTGCTGTCAATTGGTCGGAATGGTCCAATAGAAACTCAGGAATTGATTGCGACTTGCAACCTTGTGCTCTTCCCGATGGTCTACCCCATCCTTATGGGAAATTCTTTGCAATTTCTGGATTTTTTGTGGTTTATCGGTTTTTCAATTTGACTTCAGAGGCATCGCTTGATGATGTATTGGAAAAGGGTCGGGAGTTTTGCGAAAGAACTTGGGAAGTTGCAAAGAACAGTGTTGCTCCTCAGCCCTTCATTGAACAGTACTGCTTTAGAGCACCATATATTGTATTCTTGTTGAGAGAGGGCTTGCACATTACAGATAATCATGTTATAATTGGGTCTGGAAGAATTACATGGACACTTGGGGTTGCTCTGTTGGAAGCTGGGAAGGCACTTTCAACCAGATTGGGCCTTCGCACTTATGAAATATTCCAGATCAAGATCAACCCAATATTTTTTATTGCAGTGCTGTTTATTTCGTTGCTTTTCCTCCTTTGTGCATTATCATGTGTTGGAAATTGGATGCCAAAATTTTTCTGGAGGTCATATCTCCCGCTGTTTAGGACTAATGGTGCATCTTCTGCATCCGTTCTGAGTATTCCATCGCCTTTTCGATTCCAGCGTTGGAGTCCTATTAGTCCTGGGGATGGAAGAGTAAAGATGCCTCTAAGTCCAACAATTGCTGGTGGTGCGCAACGGAGACCATTTGGCTTGGGGGATAGTCTCAACAGTGGCGGTGGCATCCAGTTAATGGAGTCTTCCTTATACCCCTCCACAAGCAGTATGTCCCATAGTTATTCCTCAAATAATCTGGGCCAGATGCAATTTGACAGCAGTAGCATGGGTTCCTTTTGGTCTCCTCACAGATCTCAGATGCATCTTCAAAGCAGGCGATCACAATCTCGAGAAGACCTCAATTCTTCACTGGCTGAGGCACACATGGTGAAAGTTTAG

Protein Analysis

765

Amino Acids

84.7

Weight (kDa)

9.23

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1673
Acc16I TGCGCA 1 cut(s) 2034
Acc36I ACCTGC 2 cut(s) 319, 952
AccB1I GGYRCC 1 cut(s) 1164
AccB7I CCANNNNNTGG 2 cut(s) 929, 2092
AccI GTMKAC 1 cut(s) 1426
AccIII TCCGGA 1 cut(s) 1181
AciI CCGC 2 cut(s) 1895, 2076
AclI AACGTT 1 cut(s) 630
AclWI GGATC 2 cut(s) 185, 194
AcsI RAATTY 5 cut(s) 428, 802, 1223, 1445, 1871
AcuI CTGAAG 2 cut(s) 216, 1482
AdeI CACNNNGTG 1 cut(s) 2284
AfaI GTAC 3 cut(s) 457, 863, 1604
AfiI CCNNNNNNNGG 7 cut(s) 299, 694, 892, 929, 1064, 1988, 2092
AflIII ACRYGT 2 cut(s) 92, 985
AgsI TTSAA 7 cut(s) 551, 643, 765, 1489, 1598, 1740, 2225
AhlI ACTAGT 1 cut(s) 1138
AjnI CCWGG 4 cut(s) 162, 292, 604, 1981
AjuI GAANNNNNNNTTGG 2 cut(s) 849, 881
AluBI AGCT 6 cut(s) 187, 270, 581, 1062, 1114, 1724
AluI AGCT 6 cut(s) 187, 270, 581, 1062, 1114, 1724
Alw21I GWGCWC 4 cut(s) 937, 1312, 1414, 1618
Alw26I GTCTC 5 cut(s) 819, 992, 2035, 2069, 2202
Alw44I GTGCAC 1 cut(s) 933
AlwI GGATC 2 cut(s) 185, 194
Ama87I CYCGRG 3 cut(s) 465, 1057, 2244
Aor13HI TCCGGA 1 cut(s) 1181
AoxI GGCC 5 cut(s) 219, 847, 906, 1750, 2155
ApaLI GTGCAC 1 cut(s) 933
ApeKI GCWGC 3 cut(s) 260, 647, 958
ApoI RAATTY 5 cut(s) 428, 802, 1223, 1445, 1871
Asp700I GAANNNNTTC 1 cut(s) 546
AspLEI GCGC 2 cut(s) 700, 2035
AspS9I GGNCC 5 cut(s) 220, 906, 1368, 1750, 2155
AsuHPI GGTGA 2 cut(s) 798, 1117
AvaI CYCGRG 3 cut(s) 465, 1057, 2244
AvaII GGWCC 1 cut(s) 1368
AxyI CCTNAGG 1 cut(s) 60
BaeGI GKGCMC 2 cut(s) 100, 937
BanI GGYRCC 1 cut(s) 1164
BanII GRGCYC 1 cut(s) 337
BbsI GAAGAC 3 cut(s) 539, 2091, 2256
Bbv12I GWGCWC 4 cut(s) 937, 1312, 1414, 1618
BbvCI CCTCAGC 2 cut(s) 1584, 2271
BbvI GCAGC 3 cut(s) 247, 634, 945
BciT130I CCWGG 4 cut(s) 164, 294, 606, 1983
BciVI GTATCC 1 cut(s) 1178
BcoDI GTCTC 5 cut(s) 819, 992, 2035, 2069, 2202
BcuI ACTAGT 1 cut(s) 1138
BfaI CTAG 3 cut(s) 776, 851, 1139
BfmI CTRYAG 2 cut(s) 732, 959
BfuAI ACCTGC 2 cut(s) 319, 952
BfuI GTATCC 1 cut(s) 1178
BglII AGATCT 1 cut(s) 2207
BisI GCNGC 3 cut(s) 261, 648, 959
BlsI GCNGC 3 cut(s) 262, 649, 960
BmcAI AGTACT 2 cut(s) 457, 1604
Bme1390I CCNGG 4 cut(s) 164, 294, 606, 1983
Bme18I GGWCC 1 cut(s) 1368
BmeT110I CYCGRG 3 cut(s) 465, 1057, 2244
BmgT120I GGNCC 5 cut(s) 220, 906, 1368, 1750, 2155
BmiI GGNNCC 4 cut(s) 67, 907, 1166, 2188
BmrFI CCNGG 4 cut(s) 164, 294, 606, 1983
BmrI ACTGGG 1 cut(s) 838
BmuI ACTGGG 1 cut(s) 838
BpiI GAAGAC 3 cut(s) 539, 2091, 2256
BplI GAGNNNNNCTC 2 cut(s) 2238, 2270
BpmI CTGGAG 3 cut(s) 146, 250, 1900
Bpu10I CCTNAGC 2 cut(s) 1584, 2271
BpuEI CTTGAG 1 cut(s) 782
BsaBI GATNNNNATC 3 cut(s) 204, 1781, 2239
BsaI GGTCTC 3 cut(s) 992, 2035, 2202
BsaJI CCNNGG 3 cut(s) 605, 1128, 1982
BsaWI WCCGGW 1 cut(s) 1181
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 7 cut(s) 299, 694, 892, 929, 1064, 1988, 2092
Bse1I ACTGG 6 cut(s) 463, 577, 833, 1002, 2086, 2271
Bse21I CCTNAGG 1 cut(s) 60
Bse8I GATNNNNATC 3 cut(s) 204, 1781, 2239
BseAI TCCGGA 1 cut(s) 1181
BseBI CCWGG 4 cut(s) 164, 294, 606, 1983
BseDI CCNNGG 3 cut(s) 605, 1128, 1982
BseGI GGATG 8 cut(s) 205, 485, 1327, 1432, 1869, 1925, 1993, 2082
BseJI GATNNNNATC 3 cut(s) 204, 1781, 2239
BseLI CCNNNNNNNGG 7 cut(s) 299, 694, 892, 929, 1064, 1988, 2092
BseMII CTCAG 7 cut(s) 74, 591, 1395, 1598, 1925, 2225, 2262
BseNI ACTGG 6 cut(s) 463, 577, 833, 1002, 2086, 2271
BseRI GAGGAG 6 cut(s) 72, 163, 312, 315, 1572, 2190
BseSI GKGCMC 2 cut(s) 100, 937
BseXI GCAGC 3 cut(s) 247, 634, 945
BseYI CCCAGC 3 cut(s) 209, 901, 1724
BsgI GTGCAG 1 cut(s) 108
BshFI GGCC 5 cut(s) 221, 849, 908, 1752, 2157
BshNI GGYRCC 1 cut(s) 1164
BsiHKAI GWGCWC 4 cut(s) 937, 1312, 1414, 1618
BsiHKCI CYCGRG 3 cut(s) 465, 1057, 2244
BsiSI CCGG 1 cut(s) 1182
BslFI GGGAC 1 cut(s) 2113
BslI CCNNNNNNNGG 7 cut(s) 299, 694, 892, 929, 1064, 1988, 2092
BsmAI GTCTC 5 cut(s) 819, 992, 2035, 2069, 2202
BsmFI GGGAC 1 cut(s) 2113
BsmI GAATGC 2 cut(s) 1177, 1331
BsnI GGCC 5 cut(s) 221, 849, 908, 1752, 2157
Bso31I GGTCTC 3 cut(s) 992, 2035, 2202
BsoBI CYCGRG 3 cut(s) 465, 1057, 2244
Bsp1286I GDGCHC 6 cut(s) 100, 337, 937, 1312, 1414, 1618
Bsp13I TCCGGA 1 cut(s) 1181
Bsp143I GATC 8 cut(s) 190, 199, 586, 1280, 1776, 1782, 2207, 2234
BspACI CCGC 2 cut(s) 1895, 2076
BspANI GGCC 5 cut(s) 221, 849, 908, 1752, 2157
BspCNI CTCAG 7 cut(s) 73, 592, 1394, 1597, 1926, 2224, 2263
BspEI TCCGGA 1 cut(s) 1181
BspLI GGNNCC 4 cut(s) 67, 907, 1166, 2188
BspMAI CTGCAG 2 cut(s) 736, 963
BspMI ACCTGC 2 cut(s) 319, 952
BspPI GGATC 2 cut(s) 185, 194
BspQI GCTCTTC 1 cut(s) 1419
BspT107I GGYRCC 1 cut(s) 1164
BspTNI GGTCTC 3 cut(s) 992, 2035, 2202
BsrI ACTGG 6 cut(s) 463, 577, 833, 1002, 2086, 2271
BssECI CCNNGG 3 cut(s) 605, 1128, 1982
BssMI GATC 8 cut(s) 190, 199, 586, 1280, 1776, 1782, 2207, 2234
BssT1I CCWWGG 1 cut(s) 1128
Bst2UI CCWGG 4 cut(s) 164, 294, 606, 1983
Bst4CI ACNGT 4 cut(s) 73, 1574, 1602, 2072
Bst6I CTCTTC 2 cut(s) 1419, 1987
BstAPI GCANNNNNTGC 2 cut(s) 1346, 1922
BstC8I GCNNGC 6 cut(s) 127, 316, 899, 1175, 1649, 2231
BstF5I GGATG 8 cut(s) 205, 485, 1327, 1432, 1869, 1925, 1993, 2082
BstHHI GCGC 2 cut(s) 700, 2035
BstKTI GATC 8 cut(s) 193, 202, 589, 1283, 1779, 1785, 2210, 2237
BstMAI GTCTC 5 cut(s) 819, 992, 2035, 2069, 2202
BstMBI GATC 8 cut(s) 190, 199, 586, 1280, 1776, 1782, 2207, 2234
BstMWI GCNNNNNNNGC 5 cut(s) 122, 1346, 1730, 1922, 2030
BstNI CCWGG 4 cut(s) 164, 294, 606, 1983
BstNSI RCATGY 2 cut(s) 901, 989
BstSCI CCNGG 4 cut(s) 162, 292, 604, 1981
BstSFI CTRYAG 2 cut(s) 732, 959
BstSLI GKGCMC 2 cut(s) 100, 937
BstV1I GCAGC 3 cut(s) 247, 634, 945
BstV2I GAAGAC 3 cut(s) 539, 2091, 2256
BstX2I RGATCY 2 cut(s) 199, 2207
BstXI CCANNNNNNTGG 3 cut(s) 217, 1235, 1439
BstYI RGATCY 2 cut(s) 199, 2207
Bsu36I CCTNAGG 1 cut(s) 60
BsuI GTATCC 1 cut(s) 1178
BsuRI GGCC 5 cut(s) 221, 849, 908, 1752, 2157
BtgZI GCGATG 3 cut(s) 939, 1491, 1929
BtsCI GGATG 8 cut(s) 205, 485, 1327, 1432, 1869, 1925, 1993, 2082
BtsI GCAGTG 2 cut(s) 1041, 1812
BtsIMutI CAGTG 8 cut(s) 69, 570, 850, 1041, 1579, 1812, 2077, 2264
BveI ACCTGC 2 cut(s) 319, 952
Cac8I GCNNGC 6 cut(s) 127, 316, 899, 1175, 1649, 2231
CfoI GCGC 2 cut(s) 700, 2035
Cfr13I GGNCC 5 cut(s) 220, 906, 1368, 1750, 2155
Csp6I GTAC 3 cut(s) 456, 862, 1603
CviQI GTAC 3 cut(s) 456, 862, 1603
DpnI GATC 8 cut(s) 192, 201, 588, 1282, 1778, 1784, 2209, 2236
DpnII GATC 8 cut(s) 190, 199, 586, 1280, 1776, 1782, 2207, 2234
DraI TTTAAA 2 cut(s) 1008, 1071
DraIII CACNNNGTG 1 cut(s) 2284
Eam1104I CTCTTC 2 cut(s) 1419, 1987
EarI CTCTTC 2 cut(s) 1419, 1987
Eco130I CCWWGG 1 cut(s) 1128
Eco24I GRGCYC 1 cut(s) 337
Eco31I GGTCTC 3 cut(s) 992, 2035, 2202
Eco47I GGWCC 1 cut(s) 1368
Eco57I CTGAAG 2 cut(s) 216, 1482
Eco81I CCTNAGG 1 cut(s) 60
Eco88I CYCGRG 3 cut(s) 465, 1057, 2244
EcoRI GAATTC 1 cut(s) 802
EcoRII CCWGG 4 cut(s) 162, 292, 604, 1981
EcoT14I CCWWGG 1 cut(s) 1128
EcoT22I ATGCAT 3 cut(s) 787, 1081, 2220
EcoT38I GRGCYC 1 cut(s) 337
ErhI CCWWGG 1 cut(s) 1128
FaqI GGGAC 1 cut(s) 2113
FauI CCCGC 1 cut(s) 1902
FblI GTMKAC 1 cut(s) 1426
Fnu4HI GCNGC 3 cut(s) 261, 648, 959
FokI GGATG 8 cut(s) 192, 472, 1334, 1419, 1876, 1912, 2000, 2069
FriOI GRGCYC 1 cut(s) 337
Fsp4HI GCNGC 3 cut(s) 261, 648, 959
FspBI CTAG 3 cut(s) 776, 851, 1139
FspI TGCGCA 1 cut(s) 2034
GlaI GCGC 2 cut(s) 699, 2034
GluI GCNGC 3 cut(s) 261, 648, 959
GsaI CCCAGC 3 cut(s) 213, 905, 1728
GsuI CTGGAG 3 cut(s) 146, 250, 1900
HaeIII GGCC 5 cut(s) 221, 849, 908, 1752, 2157
HapII CCGG 1 cut(s) 1182
HhaI GCGC 2 cut(s) 700, 2035
Hin6I GCGC 2 cut(s) 698, 2033
HinP1I GCGC 2 cut(s) 698, 2033
HindIII AAGCTT 1 cut(s) 1112
HinfI GANTC 6 cut(s) 147, 303, 761, 1956, 1969, 2096
HpaII CCGG 1 cut(s) 1182
HphI GGTGA 2 cut(s) 798, 1117
Hpy166II GTNNAC 4 cut(s) 935, 1030, 1334, 1427
Hpy188I TCNGA 5 cut(s) 1210, 1363, 1501, 1935, 2214
Hpy8I GTNNAC 4 cut(s) 935, 1030, 1334, 1427
HpyAV CCTTC 8 cut(s) 536, 637, 688, 1144, 1226, 1600, 1723, 1763
HpyCH4III ACNGT 4 cut(s) 73, 1574, 1602, 2072
HpyCH4IV ACGT 2 cut(s) 92, 630
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 1346, 1730, 1922, 2030
HpySE526I ACGT 2 cut(s) 92, 630
HspAI GCGC 2 cut(s) 698, 2033
Kpn2I TCCGGA 1 cut(s) 1181
Kzo9I GATC 8 cut(s) 190, 199, 586, 1280, 1776, 1782, 2207, 2234
LguI GCTCTTC 1 cut(s) 1419
LmnI GCTCC 2 cut(s) 1315, 1585
Lsp1109I GCAGC 3 cut(s) 247, 634, 945
MaeI CTAG 3 cut(s) 776, 851, 1139
MaeII ACGT 2 cut(s) 92, 630
MaeIII GTNAC 2 cut(s) 964, 992
MalI GATC 8 cut(s) 192, 201, 588, 1282, 1778, 1784, 2209, 2236
MboI GATC 8 cut(s) 190, 199, 586, 1280, 1776, 1782, 2207, 2234
MfeI CAATTG 2 cut(s) 1354, 2019
MflI RGATCY 2 cut(s) 199, 2207
MhlI GDGCHC 6 cut(s) 100, 337, 937, 1312, 1414, 1618
MlyI GAGTC 4 cut(s) 141, 312, 1978, 2105
MmeI TCCRAC 6 cut(s) 851, 1341, 1698, 1834, 1946, 2039
Mph1103I ATGCAT 3 cut(s) 787, 1081, 2220
MroI TCCGGA 1 cut(s) 1181
MroXI GAANNNNTTC 1 cut(s) 546
MseI TTAA 5 cut(s) 536, 834, 1007, 1070, 2090
MslI CAYNNNNRTG 2 cut(s) 1437, 1846
MspA1I CMGCKG 1 cut(s) 1897
MspI CCGG 1 cut(s) 1182
MspR9I CCNGG 4 cut(s) 164, 294, 606, 1983
MssI GTTTAAAC 1 cut(s) 1008
MunI CAATTG 2 cut(s) 1354, 2019
Mva1269I GAATGC 2 cut(s) 1177, 1331
MvaI CCWGG 4 cut(s) 164, 294, 606, 1983
MwoI GCNNNNNNNGC 5 cut(s) 122, 1346, 1730, 1922, 2030
NdeII GATC 8 cut(s) 190, 199, 586, 1280, 1776, 1782, 2207, 2234
NlaIV GGNNCC 4 cut(s) 67, 907, 1166, 2188
NmeAIII GCCGAG 1 cut(s) 777
NsbI TGCGCA 1 cut(s) 2034
NsiI ATGCAT 3 cut(s) 787, 1081, 2220
NspI RCATGY 2 cut(s) 901, 989
PaeI GCATGC 1 cut(s) 901
PaeR7I CTCGAG 2 cut(s) 465, 2244
PciI ACATGT 1 cut(s) 985
PciSI GCTCTTC 1 cut(s) 1419
PcsI WCGNNNNNNNCGW 1 cut(s) 1960
PctI GAATGC 2 cut(s) 1177, 1331
PdmI GAANNNNTTC 1 cut(s) 546
PfeI GAWTC 2 cut(s) 761, 1956
PflMI CCANNNNNTGG 2 cut(s) 929, 2092
PfoI TCCNGGA 1 cut(s) 162
PkrI GCNGC 3 cut(s) 262, 649, 960
PleI GAGTC 4 cut(s) 141, 311, 1977, 2104
PmeI GTTTAAAC 1 cut(s) 1008
PpsI GAGTC 4 cut(s) 141, 311, 1977, 2104
PscI ACATGT 1 cut(s) 985
PsiI TTATAA 1 cut(s) 1673
Psp1406I AACGTT 1 cut(s) 630
Psp6I CCWGG 4 cut(s) 162, 292, 604, 1981
PspFI CCCAGC 3 cut(s) 209, 901, 1724
PspGI CCWGG 4 cut(s) 162, 292, 604, 1981
PspN4I GGNNCC 4 cut(s) 67, 907, 1166, 2188
PspPI GGNCC 5 cut(s) 220, 906, 1368, 1750, 2155
PspXI VCTCGAGB 1 cut(s) 465
PsrI GAACNNNNNNTAC 2 cut(s) 2170, 2202
PstI CTGCAG 2 cut(s) 736, 963
PsuI RGATCY 2 cut(s) 199, 2207
RsaI GTAC 3 cut(s) 457, 863, 1604
RsaNI GTAC 3 cut(s) 456, 862, 1603
RseI CAYNNNNRTG 2 cut(s) 1437, 1846
SapI GCTCTTC 1 cut(s) 1419
SaqAI TTAA 5 cut(s) 536, 834, 1007, 1070, 2090
SatI GCNGC 3 cut(s) 261, 648, 959
Sau3AI GATC 8 cut(s) 190, 199, 586, 1280, 1776, 1782, 2207, 2234
Sau96I GGNCC 5 cut(s) 220, 906, 1368, 1750, 2155
ScaI AGTACT 2 cut(s) 457, 1604
SchI GAGTC 4 cut(s) 141, 312, 1978, 2105
ScrFI CCNGG 4 cut(s) 164, 294, 606, 1983
SduI GDGCHC 6 cut(s) 100, 337, 937, 1312, 1414, 1618
SfcI CTRYAG 2 cut(s) 732, 959
Sfr274I CTCGAG 2 cut(s) 465, 2244
SinI GGWCC 1 cut(s) 1368
SlaI CTCGAG 2 cut(s) 465, 2244
SmiMI CAYNNNNRTG 2 cut(s) 1437, 1846
SmlI CTYRAG 3 cut(s) 465, 797, 2244
SmoI CTYRAG 3 cut(s) 465, 797, 2244
SpeI ACTAGT 1 cut(s) 1138
SphI GCATGC 1 cut(s) 901
SsiI CCGC 2 cut(s) 1895, 2076
SspI AATATT 2 cut(s) 1770, 1794
SspMI CTAG 3 cut(s) 776, 851, 1139
StyD4I CCNGG 4 cut(s) 162, 292, 604, 1981
StyI CCWWGG 1 cut(s) 1128
TaaI ACNGT 4 cut(s) 73, 1574, 1602, 2072
TaiI ACGT 2 cut(s) 95, 633
TatI WGTACW 2 cut(s) 455, 1602
TfiI GAWTC 2 cut(s) 761, 1956
Tru1I TTAA 5 cut(s) 536, 834, 1007, 1070, 2090
Tru9I TTAA 5 cut(s) 536, 834, 1007, 1070, 2090
TscAI CASTG 8 cut(s) 76, 577, 850, 1048, 1579, 1812, 2077, 2271
TseI GCWGC 3 cut(s) 260, 647, 958
TspDTI ATGAA 9 cut(s) 385, 542, 614, 942, 996, 1088, 1338, 1582, 1779
TspGWI ACGGA 4 cut(s) 554, 1282, 1918, 2053
TspRI CASTG 8 cut(s) 76, 577, 850, 1048, 1579, 1812, 2077, 2271
Van91I CCANNNNNTGG 2 cut(s) 929, 2092
VneI GTGCAC 1 cut(s) 933
VpaK11BI GGWCC 1 cut(s) 1368
XapI RAATTY 5 cut(s) 428, 802, 1223, 1445, 1871
XbaI TCTAGA 1 cut(s) 775
XceI RCATGY 2 cut(s) 901, 989
XcmI CCANNNNNNNNNTGG 2 cut(s) 666, 1875
XhoI CTCGAG 2 cut(s) 465, 2244
XmiI GTMKAC 1 cut(s) 1426
XmnI GAANNNNTTC 1 cut(s) 546
XspI CTAG 3 cut(s) 776, 851, 1139
ZrmI AGTACT 2 cut(s) 457, 1604
Zsp2I ATGCAT 3 cut(s) 787, 1081, 2220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.