Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0006210

Physical Location & Seq

Genomic Coordinates Forward (+)

63210211 .. 63214976

Gene Structure 4766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG457200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGTGTTTAATCGAATTGCCAATTTCTTTGCTTCTCTATCGAGTCGTTGGTCTAGCCCTCAGGCTGTATCGCCTCCCAAATCTGCTGCTTTTGCCTTTGCAAACACCGCACGCAACAAGAACCTTCTCAGACTATCATCGTCTCTCCAGGATTTCTCATCTTATAGCCAGCTTGATATCGAAGATCCCAATATCGCAACTGTGACACATTCGAAACCCCCTCCTCATTCATTGCAGAGAGAGACTGCTGCTGCCTCCAGCTTTTCCAAGGAGAAATCACTGCCAGGAGGAGGAGCCCCATTTTCGCGCAACAAGTGGGTACGAGCCTTCATGTTTCTTTGCTGTGTTTTGTTGGTTGGTTTTCTAGTTTATTTGGTTTCCATGTTGGTTTATTCCTACTGGTTTAAAGGAGAGCCCAAATTCTATATTGTGCTGGATTGTGGAAGTACTGGGACTAGAGTTTATGTATATCAGGCAACCTTGGACAACGAGAAAGATAACAGTTTTCCGATTGTCATCAAGTCATTAACAGAAGGTCTTCAAATAAAACCTAAGGCTCACACAGGGCGAGCTTATGATCGGATGGAAACTGAGCCTGGGCTCGACAAGTTGGTGCACAATGTCTCAGGGTTGAAGGTTGCAATAAAACCACTTGTTCAATGGGCAGAGAAGCAAATCCCAAAGAATGCACACAAGACAACCTCACTCTTCCTCTATGCAACTGCAGGGGTTCGTAGGCTGCCGAGTAATGATTCAAAATGGCTTCTAGATAATGCATGGTCTATACTCAAGACTTCACCTTTCTTGTGCCAAAGAGACTGGGTTAGGACTATCAGTGGCCTCGAAGAAGCTTACTTTGGCTGGATAGCCCTTAACCATCATAGGGCTATGTTTGGGGCTGGACCTAGAAAGCCAACATTTGGTTCGCTTGACTTGGGTGGTTCATCACTGCAGGTTACATTTGAGAGTAATGAACATGCGCAAAAAGACACCAGTTTAAACATTAGAATTGGGGCTGTGAACCATCATCTCACTGCATATTCTCTCCCTGGTTATGGTTTAAATGATGCGTTTGACAAGTCTGTGGGTCGTCTCTTCGAGAGGCTTCCAGAAGTCAATAAGACAGAACTAGTGAATGGGAAGGGAGAACTTAAGCATCCGTGCCTGCAGTCTGGGTATAAGGAGCAATACATTTGCTCTCAATGTGTTTCGAAATTCCAAGAAGGCGGAAGCCCTGTGATTGCAAAAAAGAGTTTGGGCAAAGGAGGAAGATCAGGGGTTTCTCTGAAGCTCATCGGTGCTCCAAATTGGGAGGAGTGTGGTAAACTAGCAAGAGTTGCTGTTAATTTATCGGAATGGTCCAATATAACGCCTGCACTCGATTGTGACGTGCAACCTTGTGCTCTTCCAGATGGTTTACCCCGACCTTATGGAAATTTTTATGCAATTTCAGGATTTTTTGTGGTTTATCGGTTTTTCAATTTGACTTCTGAGTCGTCACTTGATGATGTTTTGGAAAAGGGTCGGCAGTTTTGTGAAAGAACTTGGGAAGCTGCAAAGAAGAGTGTTGCTCCTCAGCCTTTCATTGAACAGTACTGTTTTAGGGCACCATATATTGCATTCTTGTTGAGGGAGGGCTTGCACATTATAGACAATCAAATCACCATTGGTTCTGGAAGTATCACGTGGACACAGGGGGTTGCTCTGCTGGAAGCTGGAAAGACACTTTCAACCGGACTGGGGTTTCGCAGTTACGAAGTACTCCGGATGAAAATAAACCCATTATTTCTTCTTTCAGTTTTGTTTATATCATTGATTTTACTCCTTTGTGCATTATCATGTATTGGCAATTGGATGCCAAAAATTTTCTGGAGGCCATATCTCCCGCTGTTTTGGACCAATAATGCCTCTTCTGCATCTGGTATTCCATCTCCTTTCCGGTTCCAGCGCTGGAGTCCTATTATTCCCGGGGATGGAAGAGTAAAGACGCCTCTAAGTCCAACAATTGCAGGTGGTGTCCAACAAAGACCATTCGGATTGGGACATGGTCTCAACAACGGTGGTGGAATCCAACTAATGGAGTCTTCCTTGTGCCCATCAAGTAGCAGCATCTCCCATAGTTATTCGTCAAATAGCCTGGGCCAGATGCAATTCGACAGTAGTAGCATGGGCCCCTTCTGGTCTCCTCACAGATCTCAGATGCGTCTTCAAAGCAGGCGATCACAATCTCGAGAAGACCTCAATTCTTCTCTGACTGAGGCACACATGACAAAAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0007155 GO:0007275 GO:0007596 GO:0007599 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009611 GO:0009653 GO:0009791 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017110 GO:0017111 GO:0019439 GO:0022414 GO:0022607 GO:0022610 GO:0030198 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0034641 GO:0034655 GO:0034656 GO:0042060 GO:0043062 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044282 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046483 GO:0046700 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050817 GO:0050878 GO:0050896 GO:0055086 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:0090567 GO:0099402 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko05169 map00230 map00240 map05169

Pfam Domains

Protein Families

GDA1_CD39

Protein Analysis

759

Amino Acids

84.09

Weight (kDa)

9.35

Isoelectric Point (pI)

46.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDA1_CD39	PF01150	138 - 569	2.1e-51	GDA1/CD39 (nucleoside phosphatase) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006210)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19180 AT4G19180 AT4G19180
fragaria_vesca	FvH4_2g37270 FvH4_2g37270 FvH4_2g37270 FvH4_2g37270 FvH4_2g37270 FvH4_2g37270
malus_domestica	MD08G1000700.v1.1
prunus_persica	Prupe.1G352700_v2.0.a1 Prupe.1G352700_v2.0.a1 Prupe.1G352700_v2.0.a1 Prupe.1G352700_v2.0.a1
pyrus_communis	pycom08g00020
rosa_chinensis	RchiOBHm_Chr6g0304431
rosa_laevigata	RLG00000010979
rosa_multiflora	Rmu_ssc0000218.1_g000051
rosa_roxburghii	Rroxscaffold_7G00163740
rosa_rugosa	Rorug06G0331500 Rorug06G0331600 Rorug06G0331700
rosa_samantha	Rh6AG444400 Rh6BG458000 Rh6CG457200 Rh6DG443900
rosa_wichuraiana	Rw6G038580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2000
AasI	GACNNNNNNGTC	1 cut(s)	1492
Acc16I	TGCGCA	1 cut(s)	981
Acc36I	ACCTGC	2 cut(s)	943, 2000
AccB1I	GGYRCC	1 cut(s)	1606
AccB7I	CCANNNNNTGG	2 cut(s)	920, 2077
AccII	CGCG	1 cut(s)	307
AccIII	TCCGGA	1 cut(s)	1764
AciI	CCGC	3 cut(s)	108, 1227, 1886
AclWI	GGATC	1 cut(s)	179
AcsI	RAATTY	4 cut(s)	419, 1214, 1435, 1863
AcuI	CTGAAG	1 cut(s)	1307
AcvI	CACGTG	1 cut(s)	1686
AcyI	GRCGYC	1 cut(s)	1988
AfaI	GTAC	4 cut(s)	321, 448, 1595, 1761
AfeI	AGCGCT	1 cut(s)	1949
AfiI	CCNNNNNNNGG	7 cut(s)	290, 883, 920, 1055, 1740, 1973, 2077
AflII	CTTAAG	1 cut(s)	1151
AgsI	TTSAA	8 cut(s)	542, 634, 659, 756, 1480, 1589, 1731, 2210
AhlI	ACTAGT	1 cut(s)	1129
AjiI	CACGTC	1 cut(s)	1390
AjnI	CCWGG	5 cut(s)	147, 283, 595, 1048, 2136
AjuI	GAANNNNNNNTTGG	4 cut(s)	840, 872, 907, 939
AluBI	AGCT	7 cut(s)	172, 261, 572, 851, 1291, 1553, 1715
AluI	AGCT	7 cut(s)	172, 261, 572, 851, 1291, 1553, 1715
Alw21I	GWGCWC	3 cut(s)	618, 1303, 1405
Alw26I	GTCTC	7 cut(s)	147, 236, 628, 810, 1097, 2054, 2187
Alw44I	GTGCAC	1 cut(s)	614
AlwI	GGATC	1 cut(s)	179
Ama87I	CYCGRG	2 cut(s)	1967, 2229
Aor13HI	TCCGGA	1 cut(s)	1764
Aor51HI	AGCGCT	1 cut(s)	1949
AoxI	GGCC	4 cut(s)	838, 1874, 2140, 2170
ApaI	GGGCCC	1 cut(s)	2174
ApaLI	GTGCAC	1 cut(s)	614
ApeKI	GCWGC	6 cut(s)	86, 248, 251, 739, 1553, 2106
ApoI	RAATTY	4 cut(s)	419, 1214, 1435, 1863
ArsI	GACNNNNNNTTYG	2 cut(s)	1728, 1760
Asp700I	GAANNNNTTC	1 cut(s)	537
AspLEI	GCGC	3 cut(s)	309, 982, 1950
AspS9I	GGNCC	6 cut(s)	902, 1359, 1896, 2140, 2170, 2171
AsuC2I	CCSGG	2 cut(s)	1968, 1969
AsuHPI	GGTGA	2 cut(s)	789, 1654
AsuII	TTCGAA	2 cut(s)	212, 1211
AvaI	CYCGRG	2 cut(s)	1967, 2229
AvaII	GGWCC	3 cut(s)	902, 1359, 1896
AxyI	CCTNAGG	2 cut(s)	60, 552
BaeGI	GKGCMC	4 cut(s)	618, 1609, 2096, 2174
BanI	GGYRCC	1 cut(s)	1606
BanII	GRGCYC	4 cut(s)	298, 417, 603, 2174
BbrPI	CACGTG	1 cut(s)	1686
BbsI	GAAGAC	4 cut(s)	530, 2076, 2198, 2241
Bbv12I	GWGCWC	3 cut(s)	618, 1303, 1405
BbvCI	CCTCAGC	1 cut(s)	1575
BbvI	GCAGC	6 cut(s)	73, 235, 238, 726, 1540, 2118
BccI	CCATC	7 cut(s)	577, 885, 1032, 1406, 1936, 1967, 2104
BciT130I	CCWGG	5 cut(s)	149, 285, 597, 1050, 2138
BcnI	CCSGG	2 cut(s)	1968, 1969
BcoDI	GTCTC	7 cut(s)	147, 236, 628, 810, 1097, 2054, 2187
BcuI	ACTAGT	1 cut(s)	1129
BfaI	CTAG	7 cut(s)	54, 365, 456, 767, 906, 1130, 1328
BfmI	CTRYAG	3 cut(s)	723, 950, 1166
BfoI	RGCGCY	1 cut(s)	1951
BfrI	CTTAAG	1 cut(s)	1151
BfuAI	ACCTGC	2 cut(s)	943, 2000
BglII	AGATCT	1 cut(s)	2192
BisI	GCNGC	6 cut(s)	87, 249, 252, 740, 1554, 2107
BlsI	GCNGC	6 cut(s)	88, 250, 253, 741, 1555, 2108
BmcAI	AGTACT	3 cut(s)	448, 1595, 1761
Bme1390I	CCNGG	7 cut(s)	149, 285, 597, 1050, 1968, 1969, 2138
Bme18I	GGWCC	3 cut(s)	902, 1359, 1896
BmeT110I	CYCGRG	2 cut(s)	1967, 2229
BmgBI	CACGTC	1 cut(s)	1390
BmgT120I	GGNCC	6 cut(s)	902, 1359, 1896, 2140, 2170, 2171
BmiI	GGNNCC	5 cut(s)	295, 1608, 1943, 2172, 2173
BmrFI	CCNGG	7 cut(s)	149, 285, 597, 1050, 1968, 1969, 2138
BmrI	ACTGGG	3 cut(s)	459, 829, 1748
BmsI	GCATC	7 cut(s)	1057, 1165, 1845, 1925, 2118, 2136, 2190
BmuI	ACTGGG	3 cut(s)	459, 829, 1748
BpiI	GAAGAC	4 cut(s)	530, 2076, 2198, 2241
BplI	GAGNNNNNCTC	4 cut(s)	1555, 1587, 2223, 2255
BpmI	CTGGAG	4 cut(s)	131, 241, 1891, 1972
Bpu10I	CCTNAGC	1 cut(s)	1575
Bpu14I	TTCGAA	2 cut(s)	212, 1211
BpuEI	CTTGAG	1 cut(s)	773
BpuMI	CCSGG	2 cut(s)	1968, 1969
BsaAI	YACGTR	1 cut(s)	1686
BsaBI	GATNNNNATC	2 cut(s)	515, 2224
BsaHI	GRCGYC	1 cut(s)	1988
BsaI	GGTCTC	2 cut(s)	2054, 2187
BsaJI	CCNNGG	7 cut(s)	267, 480, 596, 1048, 1967, 1968, 2137
BsaWI	WCCGGW	3 cut(s)	1733, 1764, 1938
Bsc4I	CCNNNNNNNGG	7 cut(s)	290, 883, 920, 1055, 1740, 1973, 2077
Bse1I	ACTGG	5 cut(s)	404, 454, 824, 993, 1743
Bse21I	CCTNAGG	2 cut(s)	60, 552
Bse3DI	GCAATG	1 cut(s)	230
Bse8I	GATNNNNATC	2 cut(s)	515, 2224
BseAI	TCCGGA	1 cut(s)	1764
BseBI	CCWGG	5 cut(s)	149, 285, 597, 1050, 2138
BseDI	CCNNGG	7 cut(s)	267, 480, 596, 1048, 1967, 1968, 2137
BseGI	GGATG	5 cut(s)	588, 1156, 1773, 1860, 1978
BseJI	GATNNNNATC	2 cut(s)	515, 2224
BseLI	CCNNNNNNNGG	7 cut(s)	290, 883, 920, 1055, 1740, 1973, 2077
BseMI	GCAATG	1 cut(s)	230
BseMII	CTCAG	8 cut(s)	74, 142, 582, 639, 1482, 1589, 2210, 2247
BseNI	ACTGG	5 cut(s)	404, 454, 824, 993, 1743
BseRI	GAGGAG	6 cut(s)	213, 303, 306, 1328, 1563, 2175
BseSI	GKGCMC	4 cut(s)	618, 1609, 2096, 2174
BseXI	GCAGC	6 cut(s)	73, 235, 238, 726, 1540, 2118
BsgI	GTGCAG	1 cut(s)	1359
Bsh1236I	CGCG	1 cut(s)	307
BshFI	GGCC	4 cut(s)	840, 1876, 2142, 2172
BshNI	GGYRCC	1 cut(s)	1606
BsiHKAI	GWGCWC	3 cut(s)	618, 1303, 1405
BsiHKCI	CYCGRG	2 cut(s)	1967, 2229
BsiSI	CCGG	4 cut(s)	1734, 1765, 1939, 1968
BslFI	GGGAC	2 cut(s)	466, 2055
BslI	CCNNNNNNNGG	7 cut(s)	290, 883, 920, 1055, 1740, 1973, 2077
BsmAI	GTCTC	7 cut(s)	147, 236, 628, 810, 1097, 2054, 2187
BsmBI	CGTCTC	2 cut(s)	147, 1097
BsmFI	GGGAC	2 cut(s)	466, 2055
BsmI	GAATGC	2 cut(s)	691, 1619
BsnI	GGCC	4 cut(s)	840, 1876, 2142, 2172
Bso31I	GGTCTC	2 cut(s)	2054, 2187
BsoBI	CYCGRG	2 cut(s)	1967, 2229
Bsp119I	TTCGAA	2 cut(s)	212, 1211
Bsp120I	GGGCCC	1 cut(s)	2170
Bsp1286I	GDGCHC	9 cut(s)	298, 417, 603, 618, 1303, 1405, 1609, 2096, 2174
Bsp13I	TCCGGA	1 cut(s)	1764
Bsp143I	GATC	5 cut(s)	184, 577, 1271, 2192, 2219
BspACI	CCGC	3 cut(s)	108, 1227, 1886
BspANI	GGCC	4 cut(s)	840, 1876, 2142, 2172
BspCNI	CTCAG	8 cut(s)	73, 141, 583, 638, 1483, 1588, 2209, 2248
BspEI	TCCGGA	1 cut(s)	1764
BspFNI	CGCG	1 cut(s)	307
BspLI	GGNNCC	5 cut(s)	295, 1608, 1943, 2172, 2173
BspMAI	CTGCAG	3 cut(s)	727, 954, 1170
BspMI	ACCTGC	2 cut(s)	943, 2000
BspPI	GGATC	1 cut(s)	179
BspQI	GCTCTTC	1 cut(s)	1410
BspT104I	TTCGAA	2 cut(s)	212, 1211
BspT107I	GGYRCC	1 cut(s)	1606
BspTI	CTTAAG	1 cut(s)	1151
BspTNI	GGTCTC	2 cut(s)	2054, 2187
BsrDI	GCAATG	1 cut(s)	230
BsrI	ACTGG	5 cut(s)	404, 454, 824, 993, 1743
BssECI	CCNNGG	7 cut(s)	267, 480, 596, 1048, 1967, 1968, 2137
BssMI	GATC	5 cut(s)	184, 577, 1271, 2192, 2219
BssNI	GRCGYC	1 cut(s)	1988
BssT1I	CCWWGG	2 cut(s)	267, 480
Bst2UI	CCWGG	5 cut(s)	149, 285, 597, 1050, 2138
Bst4CI	ACNGT	6 cut(s)	202, 503, 1593, 1598, 2060, 2159
Bst6I	CTCTTC	6 cut(s)	713, 1100, 1410, 1556, 1915, 1972
BstACI	GRCGYC	1 cut(s)	1988
BstAFI	CTTAAG	1 cut(s)	1151
BstAPI	GCANNNNNTGC	1 cut(s)	1337
BstBAI	YACGTR	1 cut(s)	1686
BstBI	TTCGAA	2 cut(s)	212, 1211
BstC8I	GCNNGC	7 cut(s)	112, 170, 570, 1166, 1374, 1640, 2216
BstF5I	GGATG	5 cut(s)	588, 1156, 1773, 1860, 1978
BstFNI	CGCG	1 cut(s)	307
BstH2I	RGCGCY	1 cut(s)	1951
BstHHI	GCGC	3 cut(s)	309, 982, 1950
BstKTI	GATC	5 cut(s)	187, 580, 1274, 2195, 2222
BstMAI	GTCTC	7 cut(s)	147, 236, 628, 810, 1097, 2054, 2187
BstMBI	GATC	5 cut(s)	184, 577, 1271, 2192, 2219
BstMWI	GCNNNNNNNGC	4 cut(s)	92, 107, 1337, 1913
BstNI	CCWGG	5 cut(s)	149, 285, 597, 1050, 2138
BstNSI	RCATGY	1 cut(s)	980
BstSCI	CCNGG	7 cut(s)	147, 283, 595, 1048, 1966, 1967, 2136
BstSFI	CTRYAG	3 cut(s)	723, 950, 1166
BstSLI	GKGCMC	4 cut(s)	618, 1609, 2096, 2174
BstUI	CGCG	1 cut(s)	307
BstV1I	GCAGC	6 cut(s)	73, 235, 238, 726, 1540, 2118
BstV2I	GAAGAC	4 cut(s)	530, 2076, 2198, 2241
BstX2I	RGATCY	2 cut(s)	184, 2192
BstYI	RGATCY	2 cut(s)	184, 2192
Bsu36I	CCTNAGG	2 cut(s)	60, 552
BsuRI	GGCC	4 cut(s)	840, 1876, 2142, 2172
BtrI	CACGTC	1 cut(s)	1390
BtsCI	GGATG	5 cut(s)	588, 1156, 1773, 1860, 1978
BtsI	GCAGTG	3 cut(s)	278, 947, 1032
BtsIMutI	CAGTG	4 cut(s)	278, 841, 947, 1032
BveI	ACCTGC	2 cut(s)	943, 2000
Cac8I	GCNNGC	7 cut(s)	112, 170, 570, 1166, 1374, 1640, 2216
CfoI	GCGC	3 cut(s)	309, 982, 1950
Cfr13I	GGNCC	6 cut(s)	902, 1359, 1896, 2140, 2170, 2171
Cfr9I	CCCGGG	1 cut(s)	1967
CseI	GACGC	2 cut(s)	1996, 2192
Csp6I	GTAC	4 cut(s)	320, 447, 1594, 1760
CspCI	CAANNNNNGTGG	4 cut(s)	2041, 2044, 2076, 2079
CviAII	CATG	8 cut(s)	331, 382, 777, 977, 1839, 2045, 2167, 2266
CviQI	GTAC	4 cut(s)	320, 447, 1594, 1760
DpnI	GATC	5 cut(s)	186, 579, 1273, 2194, 2221
DpnII	GATC	5 cut(s)	184, 577, 1271, 2192, 2219
DraI	TTTAAA	3 cut(s)	406, 999, 1062
DrdI	GACNNNNNNGTC	1 cut(s)	1492
DseDI	GACNNNNNNGTC	1 cut(s)	1492
Eam1104I	CTCTTC	6 cut(s)	713, 1100, 1410, 1556, 1915, 1972
EarI	CTCTTC	6 cut(s)	713, 1100, 1410, 1556, 1915, 1972
EciI	GGCGGA	1 cut(s)	1242
Eco130I	CCWWGG	2 cut(s)	267, 480
Eco24I	GRGCYC	4 cut(s)	298, 417, 603, 2174
Eco31I	GGTCTC	2 cut(s)	2054, 2187
Eco32I	GATATC	1 cut(s)	178
Eco47I	GGWCC	3 cut(s)	902, 1359, 1896
Eco47III	AGCGCT	1 cut(s)	1949
Eco57I	CTGAAG	1 cut(s)	1307
Eco72I	CACGTG	1 cut(s)	1686
Eco81I	CCTNAGG	2 cut(s)	60, 552
Eco88I	CYCGRG	2 cut(s)	1967, 2229
EcoO109I	RGGNCCY	1 cut(s)	2171
EcoRII	CCWGG	5 cut(s)	147, 283, 595, 1048, 2136
EcoRV	GATATC	1 cut(s)	178
EcoT14I	CCWWGG	2 cut(s)	267, 480
EcoT22I	ATGCAT	1 cut(s)	778
EcoT38I	GRGCYC	4 cut(s)	298, 417, 603, 2174
ErhI	CCWWGG	2 cut(s)	267, 480
Esp3I	CGTCTC	2 cut(s)	147, 1097
FaeI	CATG	8 cut(s)	334, 385, 780, 980, 1842, 2048, 2170, 2269
FaqI	GGGAC	2 cut(s)	466, 2055
FatI	CATG	8 cut(s)	330, 381, 776, 976, 1838, 2044, 2166, 2265
FauI	CCCGC	1 cut(s)	1893
Fnu4HI	GCNGC	6 cut(s)	87, 249, 252, 740, 1554, 2107
FokI	GGATG	5 cut(s)	595, 1143, 1780, 1867, 1985
FriOI	GRGCYC	4 cut(s)	298, 417, 603, 2174
Fsp4HI	GCNGC	6 cut(s)	87, 249, 252, 740, 1554, 2107
FspBI	CTAG	7 cut(s)	54, 365, 456, 767, 906, 1130, 1328
FspI	TGCGCA	1 cut(s)	981
GlaI	GCGC	3 cut(s)	308, 981, 1949
GluI	GCNGC	6 cut(s)	87, 249, 252, 740, 1554, 2107
GsuI	CTGGAG	4 cut(s)	131, 241, 1891, 1972
HaeII	RGCGCY	1 cut(s)	1951
HaeIII	GGCC	4 cut(s)	840, 1876, 2142, 2172
HapII	CCGG	4 cut(s)	1734, 1765, 1939, 1968
HgaI	GACGC	2 cut(s)	1996, 2192
HhaI	GCGC	3 cut(s)	309, 982, 1950
Hin1I	GRCGYC	1 cut(s)	1988
Hin1II	CATG	8 cut(s)	334, 385, 780, 980, 1842, 2048, 2170, 2269
Hin6I	GCGC	3 cut(s)	307, 980, 1948
HinP1I	GCGC	3 cut(s)	307, 980, 1948
HindIII	AAGCTT	1 cut(s)	849
HinfI	GANTC	6 cut(s)	43, 752, 1493, 1954, 2067, 2081
HpaII	CCGG	4 cut(s)	1734, 1765, 1939, 1968
HphI	GGTGA	2 cut(s)	789, 1654
Hpy166II	GTNNAC	5 cut(s)	616, 1021, 1325, 1418, 1689
Hpy188I	TCNGA	9 cut(s)	131, 510, 582, 1287, 1354, 1492, 2036, 2199, 2253
Hpy8I	GTNNAC	5 cut(s)	616, 1021, 1325, 1418, 1689
HpyAV	CCTTC	7 cut(s)	134, 337, 527, 628, 1135, 1217, 2185
HpyCH4III	ACNGT	6 cut(s)	202, 503, 1593, 1598, 2060, 2159
HpyCH4IV	ACGT	2 cut(s)	1389, 1685
HpyF10VI	GCNNNNNNNGC	4 cut(s)	92, 107, 1337, 1913
HpySE526I	ACGT	2 cut(s)	1389, 1685
Hsp92I	GRCGYC	1 cut(s)	1988
Hsp92II	CATG	8 cut(s)	334, 385, 780, 980, 1842, 2048, 2170, 2269
HspAI	GCGC	3 cut(s)	307, 980, 1948
Kpn2I	TCCGGA	1 cut(s)	1764
Kzo9I	GATC	5 cut(s)	184, 577, 1271, 2192, 2219
LguI	GCTCTTC	1 cut(s)	1410
LmnI	GCTCC	4 cut(s)	293, 1183, 1306, 1576
Lsp1109I	GCAGC	6 cut(s)	73, 235, 238, 726, 1540, 2118
LweI	GCATC	7 cut(s)	1057, 1165, 1845, 1925, 2118, 2136, 2190
MaeI	CTAG	7 cut(s)	54, 365, 456, 767, 906, 1130, 1328
MaeII	ACGT	2 cut(s)	1389, 1685
MaeIII	GTNAC	5 cut(s)	202, 955, 1385, 1497, 1751
MalI	GATC	5 cut(s)	186, 579, 1273, 2194, 2221
MboI	GATC	5 cut(s)	184, 577, 1271, 2192, 2219
MfeI	CAATTG	2 cut(s)	1849, 2004
MflI	RGATCY	2 cut(s)	184, 2192
MhlI	GDGCHC	9 cut(s)	298, 417, 603, 618, 1303, 1405, 1609, 2096, 2174
MlyI	GAGTC	4 cut(s)	52, 1502, 1963, 2090
MmeI	TCCRAC	3 cut(s)	2024, 2044, 2095
Mph1103I	ATGCAT	1 cut(s)	778
MroI	TCCGGA	1 cut(s)	1764
MroXI	GAANNNNTTC	1 cut(s)	537
MseI	TTAA	8 cut(s)	9, 405, 527, 873, 998, 1061, 1152, 1344
MslI	CAYNNNNRTG	1 cut(s)	1837
MspA1I	CMGCKG	1 cut(s)	1888
MspCI	CTTAAG	1 cut(s)	1151
MspI	CCGG	4 cut(s)	1734, 1765, 1939, 1968
MspR9I	CCNGG	7 cut(s)	149, 285, 597, 1050, 1968, 1969, 2138
MssI	GTTTAAAC	1 cut(s)	999
MunI	CAATTG	2 cut(s)	1849, 2004
Mva1269I	GAATGC	2 cut(s)	691, 1619
MvaI	CCWGG	5 cut(s)	149, 285, 597, 1050, 2138
MvnI	CGCG	1 cut(s)	307
MwoI	GCNNNNNNNGC	4 cut(s)	92, 107, 1337, 1913
NciI	CCSGG	2 cut(s)	1968, 1969
NdeII	GATC	5 cut(s)	184, 577, 1271, 2192, 2219
NlaIII	CATG	8 cut(s)	334, 385, 780, 980, 1842, 2048, 2170, 2269
NlaIV	GGNNCC	5 cut(s)	295, 1608, 1943, 2172, 2173
NmeAIII	GCCGAG	1 cut(s)	768
NmuCI	GTSAC	3 cut(s)	202, 1385, 1497
NsbI	TGCGCA	1 cut(s)	981
NsiI	ATGCAT	1 cut(s)	778
NspI	RCATGY	1 cut(s)	980
NspV	TTCGAA	2 cut(s)	212, 1211
PaeR7I	CTCGAG	1 cut(s)	2229
PaqCI	CACCTGC	1 cut(s)	2000
PciSI	GCTCTTC	1 cut(s)	1410
PcsI	WCGNNNNNNNCGW	1 cut(s)	1386
PctI	GAATGC	2 cut(s)	691, 1619
PdmI	GAANNNNTTC	1 cut(s)	537
PfeI	GAWTC	2 cut(s)	752, 2067
PflFI	GACNNNGTC	1 cut(s)	2046
PflMI	CCANNNNNTGG	2 cut(s)	920, 2077
PfoI	TCCNGGA	1 cut(s)	147
PkrI	GCNGC	6 cut(s)	88, 250, 253, 741, 1555, 2108
PleI	GAGTC	4 cut(s)	51, 1501, 1962, 2089
PmaCI	CACGTG	1 cut(s)	1686
PmeI	GTTTAAAC	1 cut(s)	999
PmlI	CACGTG	1 cut(s)	1686
PpsI	GAGTC	4 cut(s)	51, 1501, 1962, 2089
Ppu21I	YACGTR	1 cut(s)	1686
Psp6I	CCWGG	5 cut(s)	147, 283, 595, 1048, 2136
PspCI	CACGTG	1 cut(s)	1686
PspGI	CCWGG	5 cut(s)	147, 283, 595, 1048, 2136
PspN4I	GGNNCC	5 cut(s)	295, 1608, 1943, 2172, 2173
PspOMI	GGGCCC	1 cut(s)	2170
PspPI	GGNCC	6 cut(s)	902, 1359, 1896, 2140, 2170, 2171
PstI	CTGCAG	3 cut(s)	727, 954, 1170
PsuI	RGATCY	2 cut(s)	184, 2192
PsyI	GACNNNGTC	1 cut(s)	2046
RsaI	GTAC	4 cut(s)	321, 448, 1595, 1761
RsaNI	GTAC	4 cut(s)	320, 447, 1594, 1760
RseI	CAYNNNNRTG	1 cut(s)	1837
SapI	GCTCTTC	1 cut(s)	1410
SaqAI	TTAA	8 cut(s)	9, 405, 527, 873, 998, 1061, 1152, 1344
SatI	GCNGC	6 cut(s)	87, 249, 252, 740, 1554, 2107
Sau3AI	GATC	5 cut(s)	184, 577, 1271, 2192, 2219
Sau96I	GGNCC	6 cut(s)	902, 1359, 1896, 2140, 2170, 2171
ScaI	AGTACT	3 cut(s)	448, 1595, 1761
SchI	GAGTC	4 cut(s)	52, 1502, 1963, 2090
ScrFI	CCNGG	7 cut(s)	149, 285, 597, 1050, 1968, 1969, 2138
SduI	GDGCHC	9 cut(s)	298, 417, 603, 618, 1303, 1405, 1609, 2096, 2174
SfaNI	GCATC	7 cut(s)	1057, 1165, 1845, 1925, 2118, 2136, 2190
SfcI	CTRYAG	3 cut(s)	723, 950, 1166
Sfr274I	CTCGAG	1 cut(s)	2229
SfuI	TTCGAA	2 cut(s)	212, 1211
SinI	GGWCC	3 cut(s)	902, 1359, 1896
SlaI	CTCGAG	1 cut(s)	2229
SmaI	CCCGGG	1 cut(s)	1969
SmiMI	CAYNNNNRTG	1 cut(s)	1837
SmlI	CTYRAG	3 cut(s)	788, 1151, 2229
SmoI	CTYRAG	3 cut(s)	788, 1151, 2229
SpeI	ACTAGT	1 cut(s)	1129
SsiI	CCGC	3 cut(s)	108, 1227, 1886
SspMI	CTAG	7 cut(s)	54, 365, 456, 767, 906, 1130, 1328
StyD4I	CCNGG	7 cut(s)	147, 283, 595, 1048, 1966, 1967, 2136
StyI	CCWWGG	2 cut(s)	267, 480
TaaI	ACNGT	6 cut(s)	202, 503, 1593, 1598, 2060, 2159
TaiI	ACGT	2 cut(s)	1392, 1688
TatI	WGTACW	3 cut(s)	446, 1593, 1759
TfiI	GAWTC	2 cut(s)	752, 2067
Tru1I	TTAA	8 cut(s)	9, 405, 527, 873, 998, 1061, 1152, 1344
Tru9I	TTAA	8 cut(s)	9, 405, 527, 873, 998, 1061, 1152, 1344
TscAI	CASTG	4 cut(s)	285, 841, 954, 1039
TseFI	GTSAC	3 cut(s)	202, 1385, 1497
TseI	GCWGC	6 cut(s)	86, 248, 251, 739, 1553, 2106
Tsp45I	GTSAC	3 cut(s)	202, 1385, 1497
TspDTI	ATGAA	6 cut(s)	219, 319, 933, 987, 1573, 1784
TspGWI	ACGGA	1 cut(s)	1149
TspMI	CCCGGG	1 cut(s)	1967
TspRI	CASTG	4 cut(s)	285, 841, 954, 1039
Tth111I	GACNNNGTC	1 cut(s)	2046
Van91I	CCANNNNNTGG	2 cut(s)	920, 2077
Vha464I	CTTAAG	1 cut(s)	1151
VneI	GTGCAC	1 cut(s)	614
VpaK11BI	GGWCC	3 cut(s)	902, 1359, 1896
XapI	RAATTY	4 cut(s)	419, 1214, 1435, 1863
XbaI	TCTAGA	1 cut(s)	766
XceI	RCATGY	1 cut(s)	980
XcmI	CCANNNNNNNNNTGG	2 cut(s)	657, 1866
XhoI	CTCGAG	1 cut(s)	2229
XmaI	CCCGGG	1 cut(s)	1967
XmnI	GAANNNNTTC	1 cut(s)	537
XspI	CTAG	7 cut(s)	54, 365, 456, 767, 906, 1130, 1328
ZrmI	AGTACT	3 cut(s)	448, 1595, 1761
Zsp2I	ATGCAT	1 cut(s)	778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.