MD08G1013600.v1.1

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0012409
Physical Location & Seq
Reverse (-)
1035687 .. 1038847
3161 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1013600.v1.1.491

Sequence Viewer

Length: 1302 bp
ATGGCTCTCTTCCCTTTTGCACCAGAGGCCACAGAGCCCAAGAAGAAAGAAACGCCACCATCAAAACGCAGGCAAAAGCAGTCGTCTTCAACCAACAAAAAGCAGCAAAAACCACCATCCTCCTCCTCCTCCTCCTCCTCATGGGACCACATTAAGAACCTCCTGACCTGTAAACAGATCGAAGGGTCTAGAGTACACGACCCATCGAAAAATAATATTGTCGGTGGCGCAGCTGCCGGCCACGGTGGAGGCTACTCGAAGGTGGGGTCATCCTGCAGCTCCATATGCAGCTTCAGAGATGTCGTTCATGGGAACACTAGGGTCGTTCACAGAGGTGACAGCTCGTCGCCCGAGAGTAGCACTCTGGGTCAGGAAACCGGGTTACTGGCTCGGAAACCTGCAACTCGGTCAATCAGATCCAACGGTTCTGGTTCTTCTGCTGCTTACCAGACGTCATCATCCTCCAGAGGAATGCAATTCCGGAAGCTCTCTGGGTGTTACGAGTGCCACATGATCGTTGACCCTAGCAGGTACCCAGTTCCTAGGTCTACTATTTGTGCTTGCTCTCAGTGTGGAGAGATCTTCCCAAAGATGGAGAGTTTGGAGCATCACCAAGCAATTCGCCATGCTGTATCGGAGCTTGGCGTCGAAGATTCCGGCCGAAATATCGTGGAAATAATCTTCAAATCAAGCTGGCTCAAGAAAGACACCCCCTTCTGCAAGATCGAACACATACTAAAGGTACAGAACACGCAGCGTACGATTCAACGGTTCGAGGACTGCCGTGATGCAGTGAAGAACCGTGCGCTGATAAGCACGCGGAAGAACCCTAGGTGCGCGGCAGACGGGAACGAGCTGTTGCGGTTCCACTGCACCAGCATCTCGTGCACGCTCGGCGCACGTGGCTCGTCCAGCCTGTGCGACTCCGTACCTGGCTGCGGAGTGTGCACGATCATCCGTCACGGCTTTCAAGGCAAAGCAGTGGCGGAAGGTGATCAAGGTGGTGGGAGCAAGGGAGTGCGGACCACTGCCAGCAGCGGTAGGGCTCACGACTCGTTTAATTGTACGGACGGGCGCAGGGCCATGCTGGTGTGCCGTGTCATTGCTGGCAGGGTCAGGCGCATTGCGGACGATGCGCCACCGGAGGAGGATGGCTTGACCCAGCTGTCGGCTGCTGCTGGCTCCTACGATTCTGTAGCCGGATTCGCTGGAATCTACTCCAATCTCGAGGAACTTGTTGTTTATAATCCGAAGGCCATCCTCCCATGCTTCGTAGTCATTTACAAGGCTATGGAGTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

434

Amino Acids

46.63

Weight (kDa)

9.23

Isoelectric Point (pI)

61.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012409)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G75710
fragaria_vesca FvH4_2g38560
malus_domestica MD08G1013600.v1.1 MD15G1013200.v1.1
prunus_persica Prupe.1G366300_v2.0.a1
pyrus_communis pycom08g01220 pycom15g01140
rosa_chinensis RchiOBHm_Chr6g0302741
rosa_laevigata RLG00000011142
rosa_multiflora Rmu_sc0009897.1_g000007 Rmu_sc0017617.1_g000001 Rmu_ssc0000460.1_g000001
rosa_roxburghii Rroxscaffold_7G00165360
rosa_rugosa Rorug06G0316700
rosa_samantha Rh6AG430000 Rh6BG472500 Rh6CG442500 Rh6DG429200
rosa_wichuraiana Rw6G037240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1245
AasI GACNNNNNNGTC 1 cut(s) 1165
AatII GACGTC 1 cut(s) 455
Acc36I ACCTGC 2 cut(s) 406, 519
Acc65I GGTACC 1 cut(s) 531
AccB1I GGYRCC 1 cut(s) 531
AccI GTMKAC 1 cut(s) 548
AccII CGCG 2 cut(s) 820, 839
AccIII TCCGGA 1 cut(s) 480
AciI CCGC 8 cut(s) 820, 839, 862, 939, 986, 1021, 1038, 1127
AclWI GGATC 1 cut(s) 411
AcoI YGGCCR 2 cut(s) 238, 658
AcuI CTGAAG 1 cut(s) 277
AcvI CACGTG 1 cut(s) 902
AcyI GRCGYC 2 cut(s) 452, 645
AfaI GTAC 6 cut(s) 195, 533, 744, 760, 930, 1066
AfiI CCNNNNNNNGG 4 cut(s) 141, 592, 938, 1168
AgsI TTSAA 4 cut(s) 90, 685, 767, 971
AhdI GACNNNNNGTC 1 cut(s) 343
AjnI CCWGG 1 cut(s) 931
AleI CACNNNNGTG 1 cut(s) 333
AluBI AGCT 9 cut(s) 233, 279, 291, 342, 487, 640, 693, 856, 1165
AluI AGCT 9 cut(s) 233, 279, 291, 342, 487, 640, 693, 856, 1165
Alw21I GWGCWC 2 cut(s) 890, 950
Alw44I GTGCAC 2 cut(s) 886, 946
AlwI GGATC 1 cut(s) 411
Ama87I CYCGRG 2 cut(s) 350, 1226
Aor13HI TCCGGA 1 cut(s) 480
AoxI GGCC 5 cut(s) 27, 238, 658, 1080, 1254
ApaLI GTGCAC 2 cut(s) 886, 946
ArsI GACNNNNNNTTYG 2 cut(s) 251, 283
Asp718I GGTACC 1 cut(s) 531
AspA2I CCTAGG 2 cut(s) 542, 830
AspLEI GCGC 7 cut(s) 230, 808, 839, 899, 1077, 1122, 1138
AspS9I GGNCC 3 cut(s) 145, 1023, 1080
AsuC2I CCSGG 1 cut(s) 379
AsuHPI GGTGA 3 cut(s) 347, 602, 1004
AvaI CYCGRG 2 cut(s) 350, 1226
AvaII GGWCC 2 cut(s) 145, 1023
AvrII CCTAGG 2 cut(s) 542, 830
BaeGI GKGCMC 2 cut(s) 890, 950
BanI GGYRCC 1 cut(s) 531
BanII GRGCYC 2 cut(s) 39, 1048
BauI CACGAG 1 cut(s) 883
BbrPI CACGTG 1 cut(s) 902
BbsI GAAGAC 1 cut(s) 78
Bbv12I GWGCWC 2 cut(s) 890, 950
BccI CCATC 6 cut(s) 67, 124, 211, 586, 1145, 1265
BceAI ACGGC 3 cut(s) 768, 979, 1080
BcgI CGANNNNNNTGC 2 cut(s) 888, 922
BciT130I CCWGG 1 cut(s) 933
BclI TGATCA 1 cut(s) 994
BcnI CCSGG 1 cut(s) 379
BfaI CTAG 5 cut(s) 189, 318, 525, 543, 831
BfmI CTRYAG 2 cut(s) 274, 1194
BfuAI ACCTGC 2 cut(s) 406, 519
BglII AGATCT 1 cut(s) 579
BlnI CCTAGG 2 cut(s) 542, 830
Bme1390I CCNGG 2 cut(s) 379, 933
Bme18I GGWCC 2 cut(s) 145, 1023
BmeRI GACNNNNNGTC 1 cut(s) 343
BmeT110I CYCGRG 2 cut(s) 350, 1226
BmgT120I GGNCC 3 cut(s) 145, 1023, 1080
BmiI GGNNCC 4 cut(s) 146, 533, 866, 1183
BmrFI CCNGG 2 cut(s) 379, 933
BmrI ACTGGG 1 cut(s) 530
BmsI GCATC 4 cut(s) 616, 778, 888, 1123
BmuI ACTGGG 1 cut(s) 530
BpiI GAAGAC 1 cut(s) 78
BplI GAGNNNNNCTC 2 cut(s) 346, 378
BpmI CTGGAG 1 cut(s) 448
BpuEI CTTGAG 1 cut(s) 683
BpuMI CCSGG 1 cut(s) 379
BsaAI YACGTR 1 cut(s) 902
BsaHI GRCGYC 2 cut(s) 452, 645
BsaJI CCNNGG 3 cut(s) 241, 542, 830
BsaWI WCCGGW 2 cut(s) 480, 1141
Bsc4I CCNNNNNNNGG 4 cut(s) 141, 592, 938, 1168
Bse118I RCCGGY 1 cut(s) 236
Bse1I ACTGG 2 cut(s) 390, 536
Bse3DI GCAATG 2 cut(s) 1101, 1122
BseAI TCCGGA 1 cut(s) 480
BseBI CCWGG 1 cut(s) 933
BseDI CCNNGG 3 cut(s) 241, 542, 830
BseGI GGATG 6 cut(s) 116, 269, 458, 954, 1156, 1257
BseLI CCNNNNNNNGG 4 cut(s) 141, 592, 938, 1168
BseMI GCAATG 2 cut(s) 1101, 1122
BseMII CTCAG 1 cut(s) 581
BseNI ACTGG 2 cut(s) 390, 536
BseRI GAGGAG 7 cut(s) 112, 115, 118, 121, 124, 127, 1160
BseSI GKGCMC 2 cut(s) 890, 950
BseX3I CGGCCG 1 cut(s) 658
BseYI CCCAGC 1 cut(s) 1161
BsgI GTGCAG 1 cut(s) 856
Bsh1236I CGCG 2 cut(s) 820, 839
Bsh1285I CGRYCG 1 cut(s) 661
BshFI GGCC 5 cut(s) 29, 240, 660, 1082, 1256
BshNI GGYRCC 1 cut(s) 531
BsiEI CGRYCG 1 cut(s) 661
BsiHKAI GWGCWC 2 cut(s) 890, 950
BsiHKCI CYCGRG 2 cut(s) 350, 1226
BsiSI CCGG 6 cut(s) 237, 378, 481, 657, 1142, 1200
BsiWI CGTACG 1 cut(s) 758
BslFI GGGAC 1 cut(s) 158
BslI CCNNNNNNNGG 4 cut(s) 141, 592, 938, 1168
BsmFI GGGAC 1 cut(s) 158
BsmI GAATGC 1 cut(s) 477
BsnI GGCC 5 cut(s) 29, 240, 660, 1082, 1256
BsoBI CYCGRG 2 cut(s) 350, 1226
Bsp1286I GDGCHC 4 cut(s) 39, 890, 950, 1048
Bsp13I TCCGGA 1 cut(s) 480
Bsp143I GATC 7 cut(s) 177, 416, 513, 579, 723, 951, 994
BspACI CCGC 8 cut(s) 820, 839, 862, 939, 986, 1021, 1038, 1127
BspANI GGCC 5 cut(s) 29, 240, 660, 1082, 1256
BspCNI CTCAG 1 cut(s) 580
BspEI TCCGGA 1 cut(s) 480
BspFNI CGCG 2 cut(s) 820, 839
BspLI GGNNCC 4 cut(s) 146, 533, 866, 1183
BspMAI CTGCAG 1 cut(s) 278
BspMI ACCTGC 2 cut(s) 406, 519
BspPI GGATC 1 cut(s) 411
BspT107I GGYRCC 1 cut(s) 531
BsrDI GCAATG 2 cut(s) 1101, 1122
BsrFI RCCGGY 1 cut(s) 236
BsrI ACTGG 2 cut(s) 390, 536
BssAI RCCGGY 1 cut(s) 236
BssECI CCNNGG 3 cut(s) 241, 542, 830
BssMI GATC 7 cut(s) 177, 416, 513, 579, 723, 951, 994
BssNI GRCGYC 2 cut(s) 452, 645
BssSI CACGAG 1 cut(s) 883
BssT1I CCWWGG 2 cut(s) 542, 830
Bst2BI CACGAG 1 cut(s) 883
Bst2UI CCWGG 1 cut(s) 933
Bst4CI ACNGT 4 cut(s) 245, 425, 771, 803
Bst6I CTCTTC 1 cut(s) 14
BstACI GRCGYC 2 cut(s) 452, 645
BstAPI GCANNNNNTGC 1 cut(s) 885
BstBAI YACGTR 1 cut(s) 902
BstC8I GCNNGC 9 cut(s) 71, 238, 562, 695, 818, 890, 1033, 1108, 1180
BstDEI CTNAG 1 cut(s) 567
BstDSI CCRYGG 1 cut(s) 241
BstF5I GGATG 6 cut(s) 116, 269, 458, 954, 1156, 1257
BstFNI CGCG 2 cut(s) 820, 839
BstHHI GCGC 7 cut(s) 230, 808, 839, 899, 1077, 1122, 1138
BstKTI GATC 7 cut(s) 180, 419, 516, 582, 726, 954, 997
BstMBI GATC 7 cut(s) 177, 416, 513, 579, 723, 951, 994
BstMCI CGRYCG 1 cut(s) 661
BstNI CCWGG 1 cut(s) 933
BstSCI CCNGG 2 cut(s) 377, 931
BstSFI CTRYAG 2 cut(s) 274, 1194
BstSLI GKGCMC 2 cut(s) 890, 950
BstUI CGCG 2 cut(s) 820, 839
BstV2I GAAGAC 1 cut(s) 78
BstX2I RGATCY 2 cut(s) 416, 579
BstYI RGATCY 2 cut(s) 416, 579
BstZI CGGCCG 1 cut(s) 658
BsuRI GGCC 5 cut(s) 29, 240, 660, 1082, 1256
BtgI CCRYGG 1 cut(s) 241
BtsCI GGATG 6 cut(s) 116, 269, 458, 954, 1156, 1257
BtsI GCAGTG 4 cut(s) 798, 868, 987, 1026
BtsIMutI CAGTG 5 cut(s) 575, 798, 868, 987, 1026
BveI ACCTGC 2 cut(s) 406, 519
Cac8I GCNNGC 9 cut(s) 71, 238, 562, 695, 818, 890, 1033, 1108, 1180
CfoI GCGC 7 cut(s) 230, 808, 839, 899, 1077, 1122, 1138
Cfr10I RCCGGY 1 cut(s) 236
Cfr13I GGNCC 3 cut(s) 145, 1023, 1080
CseI GACGC 1 cut(s) 634
Csp6I GTAC 6 cut(s) 194, 532, 743, 759, 929, 1065
CviAII CATG 6 cut(s) 141, 308, 511, 626, 1084, 1266
CviQI GTAC 6 cut(s) 194, 532, 743, 759, 929, 1065
DdeI CTNAG 1 cut(s) 567
DpnI GATC 7 cut(s) 179, 418, 515, 581, 725, 953, 996
DpnII GATC 7 cut(s) 177, 416, 513, 579, 723, 951, 994
DrdI GACNNNNNNGTC 1 cut(s) 1165
DriI GACNNNNNGTC 1 cut(s) 343
DseDI GACNNNNNNGTC 1 cut(s) 1165
EaeI YGGCCR 2 cut(s) 238, 658
EagI CGGCCG 1 cut(s) 658
Eam1104I CTCTTC 1 cut(s) 14
Eam1105I GACNNNNNGTC 1 cut(s) 343
EarI CTCTTC 1 cut(s) 14
EciI GGCGGA 1 cut(s) 1001
EclXI CGGCCG 1 cut(s) 658
Eco130I CCWWGG 2 cut(s) 542, 830
Eco24I GRGCYC 2 cut(s) 39, 1048
Eco47I GGWCC 2 cut(s) 145, 1023
Eco52I CGGCCG 1 cut(s) 658
Eco57I CTGAAG 1 cut(s) 277
Eco72I CACGTG 1 cut(s) 902
Eco88I CYCGRG 2 cut(s) 350, 1226
EcoRII CCWGG 1 cut(s) 931
EcoT14I CCWWGG 2 cut(s) 542, 830
EcoT38I GRGCYC 2 cut(s) 39, 1048
ErhI CCWWGG 2 cut(s) 542, 830
FaeI CATG 6 cut(s) 144, 311, 514, 629, 1087, 1269
FaqI GGGAC 1 cut(s) 158
FatI CATG 6 cut(s) 140, 307, 510, 625, 1083, 1265
FauNDI CATATG 1 cut(s) 284
FbaI TGATCA 1 cut(s) 994
FblI GTMKAC 1 cut(s) 548
FokI GGATG 6 cut(s) 103, 256, 445, 941, 1163, 1244
FriOI GRGCYC 2 cut(s) 39, 1048
FspBI CTAG 5 cut(s) 189, 318, 525, 543, 831
GlaI GCGC 7 cut(s) 229, 807, 838, 898, 1076, 1121, 1137
GsaI CCCAGC 1 cut(s) 1165
GsuI CTGGAG 1 cut(s) 448
HaeIII GGCC 5 cut(s) 29, 240, 660, 1082, 1256
HapII CCGG 6 cut(s) 237, 378, 481, 657, 1142, 1200
HgaI GACGC 1 cut(s) 634
HhaI GCGC 7 cut(s) 230, 808, 839, 899, 1077, 1122, 1138
Hin1I GRCGYC 2 cut(s) 452, 645
Hin1II CATG 6 cut(s) 144, 311, 514, 629, 1087, 1269
Hin6I GCGC 7 cut(s) 228, 806, 837, 897, 1075, 1120, 1136
HinP1I GCGC 7 cut(s) 228, 806, 837, 897, 1075, 1120, 1136
HincII GTYRAC 1 cut(s) 520
HindII GTYRAC 1 cut(s) 520
HinfI GANTC 8 cut(s) 653, 763, 923, 1052, 1190, 1203, 1212, 1295
HpaII CCGG 6 cut(s) 237, 378, 481, 657, 1142, 1200
HphI GGTGA 3 cut(s) 347, 602, 1004
Hpy166II GTNNAC 7 cut(s) 173, 196, 328, 520, 549, 888, 948
Hpy188I TCNGA 5 cut(s) 296, 393, 416, 637, 1251
Hpy188III TCNNGA 9 cut(s) 163, 189, 371, 465, 481, 700, 1049, 1226, 1299
Hpy8I GTNNAC 7 cut(s) 173, 196, 328, 520, 549, 888, 948
Hpy99I CGWCG 2 cut(s) 349, 650
HpyAV CCTTC 5 cut(s) 176, 253, 724, 983, 1246
HpyCH4III ACNGT 4 cut(s) 245, 425, 771, 803
HpyCH4IV ACGT 2 cut(s) 452, 901
HpyF3I CTNAG 1 cut(s) 567
HpySE526I ACGT 2 cut(s) 452, 901
Hsp92I GRCGYC 2 cut(s) 452, 645
Hsp92II CATG 6 cut(s) 144, 311, 514, 629, 1087, 1269
HspAI GCGC 7 cut(s) 228, 806, 837, 897, 1075, 1120, 1136
Kpn2I TCCGGA 1 cut(s) 480
KpnI GGTACC 1 cut(s) 535
KroI GCCGGC 1 cut(s) 236
KroNI GCCGGC 1 cut(s) 238
Ksp22I TGATCA 1 cut(s) 994
Kzo9I GATC 7 cut(s) 177, 416, 513, 579, 723, 951, 994
LmnI GCTCC 5 cut(s) 284, 604, 637, 1008, 1187
LweI GCATC 4 cut(s) 616, 778, 888, 1123
MaeI CTAG 5 cut(s) 189, 318, 525, 543, 831
MaeII ACGT 2 cut(s) 452, 901
MaeIII GTNAC 4 cut(s) 335, 381, 497, 959
MalI GATC 7 cut(s) 179, 418, 515, 581, 725, 953, 996
MboI GATC 7 cut(s) 177, 416, 513, 579, 723, 951, 994
MboII GAAGA 8 cut(s) 55, 78, 426, 574, 662, 673, 808, 835
MflI RGATCY 2 cut(s) 416, 579
MhlI GDGCHC 4 cut(s) 39, 890, 950, 1048
MluCI AATT 3 cut(s) 476, 618, 1060
MlyI GAGTC 2 cut(s) 917, 1046
MmeI TCCRAC 1 cut(s) 444
MroI TCCGGA 1 cut(s) 480
MroNI GCCGGC 1 cut(s) 236
MseI TTAA 2 cut(s) 153, 1059
MslI CAYNNNNRTG 2 cut(s) 333, 1088
MspA1I CMGCKG 3 cut(s) 233, 1038, 1165
MspI CCGG 6 cut(s) 237, 378, 481, 657, 1142, 1200
MspR9I CCNGG 2 cut(s) 379, 933
Mva1269I GAATGC 1 cut(s) 477
MvaI CCWGG 1 cut(s) 933
MvnI CGCG 2 cut(s) 820, 839
NaeI GCCGGC 1 cut(s) 238
NciI CCSGG 1 cut(s) 379
NdeI CATATG 1 cut(s) 284
NdeII GATC 7 cut(s) 177, 416, 513, 579, 723, 951, 994
NgoMIV GCCGGC 1 cut(s) 236
NlaIII CATG 6 cut(s) 144, 311, 514, 629, 1087, 1269
NlaIV GGNNCC 4 cut(s) 146, 533, 866, 1183
NmeAIII GCCGAG 1 cut(s) 873
NmuCI GTSAC 2 cut(s) 335, 959
OliI CACNNNNGTG 1 cut(s) 333
PaeR7I CTCGAG 1 cut(s) 1226
PcsI WCGNNNNNNNCGW 1 cut(s) 758
PctI GAATGC 1 cut(s) 477
PdiI GCCGGC 1 cut(s) 238
PfeI GAWTC 5 cut(s) 653, 763, 1190, 1203, 1212
Pfl23II CGTACG 1 cut(s) 758
PleI GAGTC 2 cut(s) 917, 1046
PmaCI CACGTG 1 cut(s) 902
PmlI CACGTG 1 cut(s) 902
PpsI GAGTC 2 cut(s) 917, 1046
Ppu21I YACGTR 1 cut(s) 902
PsiI TTATAA 1 cut(s) 1245
Psp6I CCWGG 1 cut(s) 931
PspCI CACGTG 1 cut(s) 902
PspFI CCCAGC 1 cut(s) 1161
PspGI CCWGG 1 cut(s) 931
PspLI CGTACG 1 cut(s) 758
PspN4I GGNNCC 4 cut(s) 146, 533, 866, 1183
PspPI GGNCC 3 cut(s) 145, 1023, 1080
PstI CTGCAG 1 cut(s) 278
PsuI RGATCY 2 cut(s) 416, 579
PvuII CAGCTG 2 cut(s) 233, 1165
RsaI GTAC 6 cut(s) 195, 533, 744, 760, 930, 1066
RsaNI GTAC 6 cut(s) 194, 532, 743, 759, 929, 1065
RseI CAYNNNNRTG 2 cut(s) 333, 1088
SaqAI TTAA 2 cut(s) 153, 1059
Sau3AI GATC 7 cut(s) 177, 416, 513, 579, 723, 951, 994
Sau96I GGNCC 3 cut(s) 145, 1023, 1080
SchI GAGTC 2 cut(s) 917, 1046
ScrFI CCNGG 2 cut(s) 379, 933
SduI GDGCHC 4 cut(s) 39, 890, 950, 1048
SfaNI GCATC 4 cut(s) 616, 778, 888, 1123
SfcI CTRYAG 2 cut(s) 274, 1194
Sfr274I CTCGAG 1 cut(s) 1226
SinI GGWCC 2 cut(s) 145, 1023
SlaI CTCGAG 1 cut(s) 1226
SmiMI CAYNNNNRTG 2 cut(s) 333, 1088
SmlI CTYRAG 2 cut(s) 698, 1226
SmoI CTYRAG 2 cut(s) 698, 1226
Sse9I AATT 3 cut(s) 476, 618, 1060
SsiI CCGC 8 cut(s) 820, 839, 862, 939, 986, 1021, 1038, 1127
SspI AATATT 1 cut(s) 217
SspMI CTAG 5 cut(s) 189, 318, 525, 543, 831
StyD4I CCNGG 2 cut(s) 377, 931
StyI CCWWGG 2 cut(s) 542, 830
TaaI ACNGT 4 cut(s) 245, 425, 771, 803
TaiI ACGT 2 cut(s) 455, 904
TaqI TCGA 7 cut(s) 180, 206, 257, 648, 726, 774, 1227
TaqII GACCGA 1 cut(s) 396
TasI AATT 3 cut(s) 476, 618, 1060
TatI WGTACW 1 cut(s) 193
TauI GCSGC 1 cut(s) 842
TfiI GAWTC 5 cut(s) 653, 763, 1190, 1203, 1212
Tru1I TTAA 2 cut(s) 153, 1059
Tru9I TTAA 2 cut(s) 153, 1059
TscAI CASTG 5 cut(s) 575, 798, 875, 987, 1033
TseFI GTSAC 2 cut(s) 335, 959
Tsp45I GTSAC 2 cut(s) 335, 959
TspDTI ATGAA 1 cut(s) 296
TspGWI ACGGA 3 cut(s) 916, 947, 1082
TspRI CASTG 5 cut(s) 575, 798, 875, 987, 1033
VneI GTGCAC 2 cut(s) 886, 946
VpaK11BI GGWCC 2 cut(s) 145, 1023
XbaI TCTAGA 1 cut(s) 188
XhoI CTCGAG 1 cut(s) 1226
XmaJI CCTAGG 2 cut(s) 542, 830
XmiI GTMKAC 1 cut(s) 548
XspI CTAG 5 cut(s) 189, 318, 525, 543, 831
ZraI GACGTC 1 cut(s) 453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.