Rorug06G0316700

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0011843
Physical Location & Seq
Reverse (-)
46812494 .. 46818538
6045 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0316700.1

Sequence Viewer

Length: 1644 bp
ATGGACACGCACTCTTCTCACCTCGCCGTCTCCAACCGTTCGCGGAGCTCGCAGTCCCCGTCGCCGTCCCACTCGGCCTCCGCCTCCGCCACCTCCTCCATCCACAAGCGCAAGCTCGCGTCTGAGGACCACGCGCCCCCCTTCCCTCCCTCCTCCTTCTCCGCCGACACCCGCGACGGCGCTCTCACCTCCAACGACGACCTCGAGAGCATCTCCGCCCGCGGCGGCGGCGCCGACTCCGACTCCGACGATGAGTCCGAGGCCCTCGGCGACGACGACGAGGACTTCGACCACGACTCCTCCATGCGCAACTTCACTGCCGCTCGCCTCGATAACAGCGGCGGCTCCGCCGCGGCCTCGGCGCGCAATTCGAAGCTCAAGACGGAGAATTTGACGGTTAAGATTGAGAATTCGGATAGTGTTAAGGACGGCGGTGGGAATGCCGGGACCTGTACGGTGGGGCCTACTTCGTCGGTGCCGGGGATAATGGTGAAGGAGGACGCGACTAAAATTTTTACAGAGAATATACAAACCAGTGGAGCTTATAGTGCTAGAGAGGAGCTACTGAAGAGAGAGGAGGAAGCAGGGAGGCTCAAGTTTGTGTGCCTTTCGAATGATGGTATTGATGAGCATATGGTCTGGTTGGTAGGATTGAAGAACATATTTGCCAGGCAACTACCAAACATGCCCAAGGAGTACATTGTTCGACTGGTTATGGATAGGAGCCATAAGTCGGTTATGGTTATCAGACGTAATCATGTTGTTGGTGGCATAACTTATCGACCATATGTCAGCCAAAGGTTTGGAGAGATAGCTTTTTGTGCAATCACAGCTGATGAACAAGTAAAAGGTTATGGCACCAGACTGATGAATCACTTAAAACAACATGCACGGGATGTTGATGGGCTAACCCATTTCCTGACCTATGCTGACAATAATGCCGTTGGCTATTTTATTAAACAGGGTTTTACGAAAGAGATTTACCTGGAGAAGGACAGATGGCATGGCTATATAAAAGACTATGATGGAGGAATCCTAATGGAATGCAAAATAGACCAAAAGCTTCCATATACTGATTTATCAACTATGATTCGTCGTCAAAGGCAGGCAATTGATGAAAAGATAAGAGAGCTCTCAAATTGTCACATTGTTTATCCTGGCATTGATTTCCAAAAGAAAGAAGCTGGTATTCCTAAAAAGCTCATCAAGGTCGAGGACATCCCTGGCTTGAGGGAGGCTGGGTGGACCCCTGATCAATTTGGCCATTCACGTTTTGGAGCTTTGACAGCTTCCACAGAGAATGCCAAAAAGCATTTGACTGCTTTCATGCGTGCCCTTCTGAAGTCTATGCATGACCATGTTGATGCGTGGCCATTCAAGGAACCAGTCGATGCACGTGATGTTCCTGATTATTATGACATCATCAAAGATCCTATGGATCTAAAGACAATGTCTAAGAGGGTAGAGTCGGAGCAGTATTATGTAACATTTGAGATGTTTGTTGCGGATGCCAAGAGGATGTTTGCAAATGCACGCACTTACAATTCTCCCGATACCATTTACTACAAGTGTTCAACCAGGCTGGAATCTCACTTTCAAAGCAAAGTGCAATCAGGTCTCCAAGCTGGCGCCAAAATTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

547

Amino Acids

61.06

Weight (kDa)

6.27

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 240 - 323 3.6e-11 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 245 - 324 4.3e-06 Acetyltransferase (GNAT) domain
Bromodomain PF00439 444 - 525 5.2e-21 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011843)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G75720 AT1G75720 AT1G75720
fragaria_vesca FvH4_2g38540
malus_domestica MD08G1013500.v1.1 MD15G1013000.v1.1
prunus_persica Prupe.1G366100_v2.0.a1
pyrus_communis pycom08g01190 pycom15g01130
rosa_chinensis RchiOBHm_Chr6g0302771
rosa_laevigata RLG00000011139
rosa_roxburghii Rroxscaffold_7G00165340
rosa_rugosa Rorug06G0316700 Rorug06G0316800
rosa_samantha Rh6AG430200 Rh6BG472400 Rh6CG442700 Rh6DG429400
rosa_wichuraiana Rw6G037260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 308
AccB1I GGYRCC 4 cut(s) 230, 475, 857, 1628
AccBSI CCGCTC 1 cut(s) 323
AccII CGCG 8 cut(s) 43, 119, 134, 174, 222, 353, 364, 503
AclWI GGATC 2 cut(s) 1424, 1446
AcoI YGGCCR 2 cut(s) 1261, 1370
AcsI RAATTY 4 cut(s) 388, 409, 510, 1635
AcuI CTGAAG 2 cut(s) 587, 1361
AcvI CACGTG 1 cut(s) 1397
AcyI GRCGYC 2 cut(s) 231, 1629
AfaI GTAC 2 cut(s) 454, 698
AfiI CCNNNNNNNGG 2 cut(s) 733, 991
AgsI TTSAA 4 cut(s) 655, 1378, 1575, 1598
AhdI GACNNNNNGTC 2 cut(s) 253, 788
AjnI CCWGG 5 cut(s) 668, 984, 1156, 1222, 1577
Alw21I GWGCWC 2 cut(s) 50, 1134
Alw26I GTCTC 2 cut(s) 34, 1622
AlwI GGATC 2 cut(s) 1424, 1446
Ama87I CYCGRG 1 cut(s) 203
AoxI GGCC 6 cut(s) 75, 261, 354, 461, 1261, 1370
ApoI RAATTY 4 cut(s) 388, 409, 510, 1635
ArsI GACNNNNNNTTYG 4 cut(s) 269, 301, 373, 405
AspLEI GCGC 8 cut(s) 111, 136, 182, 233, 309, 364, 366, 1631
AspS9I GGNCC 5 cut(s) 127, 262, 447, 461, 1245
AsuC2I CCSGG 2 cut(s) 445, 480
AsuHPI GGTGA 3 cut(s) 11, 178, 502
AsuII TTCGAA 2 cut(s) 371, 611
AvaI CYCGRG 1 cut(s) 203
AvaII GGWCC 3 cut(s) 127, 447, 1245
BaeGI GKGCMC 1 cut(s) 1336
BalI TGGCCA 2 cut(s) 1263, 1372
BanI GGYRCC 4 cut(s) 230, 475, 857, 1628
BanII GRGCYC 2 cut(s) 50, 1134
BbrPI CACGTG 1 cut(s) 1397
Bbv12I GWGCWC 2 cut(s) 50, 1134
BccI CCATC 5 cut(s) 107, 611, 896, 993, 1019
BceAI ACGGC 5 cut(s) 11, 49, 193, 445, 926
BciT130I CCWGG 5 cut(s) 670, 986, 1158, 1224, 1579
BclI TGATCA 1 cut(s) 1252
BcnI CCSGG 2 cut(s) 445, 480
BcoDI GTCTC 2 cut(s) 34, 1622
BfaI CTAG 1 cut(s) 552
BfoI RGCGCY 3 cut(s) 183, 234, 1632
BisI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 343, 351, 354
BlsI GCNGC 8 cut(s) 224, 227, 230, 322, 341, 344, 352, 355
Bme1390I CCNGG 7 cut(s) 445, 480, 670, 986, 1158, 1224, 1579
Bme18I GGWCC 3 cut(s) 127, 447, 1245
BmeRI GACNNNNNGTC 2 cut(s) 253, 788
BmeT110I CYCGRG 1 cut(s) 203
BmgT120I GGNCC 5 cut(s) 127, 262, 447, 461, 1245
BmrFI CCNGG 7 cut(s) 445, 480, 670, 986, 1158, 1224, 1579
BmsI GCATC 4 cut(s) 219, 1354, 1381, 1498
BplI GAGNNNNNCTC 2 cut(s) 197, 229
BpmI CTGGAG 1 cut(s) 1007
Bpu14I TTCGAA 2 cut(s) 371, 611
BpuEI CTTGAG 3 cut(s) 362, 578, 1249
BpuMI CCSGG 2 cut(s) 445, 480
BsaAI YACGTR 1 cut(s) 1397
BsaHI GRCGYC 2 cut(s) 231, 1629
BsaI GGTCTC 1 cut(s) 1622
BsaJI CCNNGG 8 cut(s) 220, 258, 265, 351, 357, 479, 690, 1222
Bsc4I CCNNNNNNNGG 2 cut(s) 733, 991
Bse1I ACTGG 3 cut(s) 534, 714, 1385
BseBI CCWGG 5 cut(s) 670, 986, 1158, 1224, 1579
BseDI CCNNGG 8 cut(s) 220, 258, 265, 351, 357, 479, 690, 1222
BseGI GGATG 5 cut(s) 99, 901, 1218, 1513, 1524
BseLI CCNNNNNNNGG 2 cut(s) 733, 991
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 3 cut(s) 534, 714, 1385
BsePI GCGCGC 1 cut(s) 362
BseRI GAGGAG 5 cut(s) 85, 142, 289, 572, 590
BseSI GKGCMC 1 cut(s) 1336
BseYI CCCAGC 1 cut(s) 1238
Bsh1236I CGCG 8 cut(s) 43, 119, 134, 174, 222, 353, 364, 503
BshFI GGCC 6 cut(s) 77, 263, 356, 463, 1263, 1372
BshNI GGYRCC 4 cut(s) 230, 475, 857, 1628
BsiHKAI GWGCWC 2 cut(s) 50, 1134
BsiHKCI CYCGRG 1 cut(s) 203
BsiSI CCGG 2 cut(s) 444, 479
BslFI GGGAC 3 cut(s) 40, 52, 460
BslI CCNNNNNNNGG 2 cut(s) 733, 991
BsmAI GTCTC 2 cut(s) 34, 1622
BsmBI CGTCTC 1 cut(s) 34
BsmFI GGGAC 3 cut(s) 40, 52, 460
BsmI GAATGC 3 cut(s) 445, 1049, 1306
BsnI GGCC 6 cut(s) 77, 263, 356, 463, 1263, 1372
Bso31I GGTCTC 1 cut(s) 1622
BsoBI CYCGRG 1 cut(s) 203
Bsp119I TTCGAA 2 cut(s) 371, 611
Bsp1286I GDGCHC 3 cut(s) 50, 1134, 1336
Bsp143I GATC 3 cut(s) 1252, 1429, 1438
BspANI GGCC 6 cut(s) 77, 263, 356, 463, 1263, 1372
BspCNI CTCAG 1 cut(s) 115
BspFNI CGCG 8 cut(s) 43, 119, 134, 174, 222, 353, 364, 503
BspPI GGATC 2 cut(s) 1424, 1446
BspT104I TTCGAA 2 cut(s) 371, 611
BspT107I GGYRCC 4 cut(s) 230, 475, 857, 1628
BspTNI GGTCTC 1 cut(s) 1622
BsrBI CCGCTC 1 cut(s) 323
BsrI ACTGG 3 cut(s) 534, 714, 1385
BssECI CCNNGG 8 cut(s) 220, 258, 265, 351, 357, 479, 690, 1222
BssHII GCGCGC 1 cut(s) 362
BssMI GATC 3 cut(s) 1252, 1429, 1438
BssNI GRCGYC 2 cut(s) 231, 1629
BssT1I CCWWGG 1 cut(s) 690
Bst2UI CCWGG 5 cut(s) 670, 986, 1158, 1224, 1579
Bst4CI ACNGT 3 cut(s) 38, 397, 457
Bst6I CTCTTC 2 cut(s) 19, 563
BstACI GRCGYC 2 cut(s) 231, 1629
BstBAI YACGTR 1 cut(s) 1397
BstBI TTCGAA 2 cut(s) 371, 611
BstDEI CTNAG 2 cut(s) 123, 1455
BstDSI CCRYGG 2 cut(s) 220, 351
BstENI CCTNNNNNAGG 1 cut(s) 989
BstF5I GGATG 5 cut(s) 99, 901, 1218, 1513, 1524
BstFNI CGCG 8 cut(s) 43, 119, 134, 174, 222, 353, 364, 503
BstH2I RGCGCY 3 cut(s) 183, 234, 1632
BstHHI GCGC 8 cut(s) 111, 136, 182, 233, 309, 364, 366, 1631
BstKTI GATC 3 cut(s) 1255, 1432, 1441
BstMAI GTCTC 2 cut(s) 34, 1622
BstMBI GATC 3 cut(s) 1252, 1429, 1438
BstMWI GCNNNNNNNGC 7 cut(s) 49, 228, 359, 548, 821, 830, 1286
BstNI CCWGG 5 cut(s) 670, 986, 1158, 1224, 1579
BstNSI RCATGY 2 cut(s) 688, 890
BstSCI CCNGG 7 cut(s) 443, 478, 668, 984, 1156, 1222, 1577
BstSLI GKGCMC 1 cut(s) 1336
BstUI CGCG 8 cut(s) 43, 119, 134, 174, 222, 353, 364, 503
BstX2I RGATCY 2 cut(s) 1429, 1438
BstXI CCANNNNNNTGG 1 cut(s) 803
BstYI RGATCY 2 cut(s) 1429, 1438
BsuRI GGCC 6 cut(s) 77, 263, 356, 463, 1263, 1372
BtgI CCRYGG 2 cut(s) 220, 351
BtsCI GGATG 5 cut(s) 99, 901, 1218, 1513, 1524
BtsI GCAGTG 1 cut(s) 315
BtsIMutI CAGTG 2 cut(s) 315, 541
CfoI GCGC 8 cut(s) 111, 136, 182, 233, 309, 364, 366, 1631
Cfr13I GGNCC 5 cut(s) 127, 262, 447, 461, 1245
Cfr42I CCGCGG 2 cut(s) 223, 354
CseI GACGC 2 cut(s) 108, 509
Csp6I GTAC 2 cut(s) 453, 697
CviAII CATG 8 cut(s) 304, 685, 758, 887, 1004, 1327, 1352, 1358
CviQI GTAC 2 cut(s) 453, 697
DdeI CTNAG 2 cut(s) 123, 1455
DinI GGCGCC 2 cut(s) 232, 1630
DpnI GATC 3 cut(s) 1254, 1431, 1440
DpnII GATC 3 cut(s) 1252, 1429, 1438
DriI GACNNNNNGTC 2 cut(s) 253, 788
EaeI YGGCCR 2 cut(s) 1261, 1370
Eam1104I CTCTTC 2 cut(s) 19, 563
Eam1105I GACNNNNNGTC 2 cut(s) 253, 788
EarI CTCTTC 2 cut(s) 19, 563
EciI GGCGGA 5 cut(s) 70, 76, 151, 205, 337
Ecl136II GAGCTC 2 cut(s) 48, 1132
Eco130I CCWWGG 1 cut(s) 690
Eco24I GRGCYC 2 cut(s) 50, 1134
Eco31I GGTCTC 1 cut(s) 1622
Eco47I GGWCC 3 cut(s) 127, 447, 1245
Eco53kI GAGCTC 2 cut(s) 48, 1132
Eco57I CTGAAG 2 cut(s) 587, 1361
Eco72I CACGTG 1 cut(s) 1397
Eco88I CYCGRG 1 cut(s) 203
EcoICRI GAGCTC 2 cut(s) 48, 1132
EcoNI CCTNNNNNAGG 1 cut(s) 989
EcoO109I RGGNCCY 3 cut(s) 262, 447, 461
EcoRI GAATTC 1 cut(s) 409
EcoRII CCWGG 5 cut(s) 668, 984, 1156, 1222, 1577
EcoT14I CCWWGG 1 cut(s) 690
EcoT22I ATGCAT 1 cut(s) 1353
EcoT38I GRGCYC 2 cut(s) 50, 1134
EgeI GGCGCC 2 cut(s) 232, 1630
EheI GGCGCC 2 cut(s) 232, 1630
ErhI CCWWGG 1 cut(s) 690
Esp3I CGTCTC 1 cut(s) 34
FaeI CATG 8 cut(s) 307, 688, 761, 890, 1007, 1330, 1355, 1361
FaqI GGGAC 3 cut(s) 40, 52, 460
FatI CATG 8 cut(s) 303, 684, 757, 886, 1003, 1326, 1351, 1357
FauI CCCGC 2 cut(s) 179, 227
FauNDI CATATG 2 cut(s) 633, 787
FbaI TGATCA 1 cut(s) 1252
Fnu4HI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 343, 351, 354
FokI GGATG 5 cut(s) 86, 908, 1205, 1520, 1531
FriOI GRGCYC 2 cut(s) 50, 1134
Fsp4HI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 343, 351, 354
FspBI CTAG 1 cut(s) 552
FspI TGCGCA 1 cut(s) 308
GlaI GCGC 8 cut(s) 110, 135, 181, 232, 308, 363, 365, 1630
GluI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 343, 351, 354
GsaI CCCAGC 1 cut(s) 1242
GsuI CTGGAG 1 cut(s) 1007
HaeII RGCGCY 3 cut(s) 183, 234, 1632
HaeIII GGCC 6 cut(s) 77, 263, 356, 463, 1263, 1372
HapII CCGG 2 cut(s) 444, 479
HgaI GACGC 2 cut(s) 108, 509
HhaI GCGC 8 cut(s) 111, 136, 182, 233, 309, 364, 366, 1631
Hin1I GRCGYC 2 cut(s) 231, 1629
Hin1II CATG 8 cut(s) 307, 688, 761, 890, 1007, 1330, 1355, 1361
Hin6I GCGC 8 cut(s) 109, 134, 180, 231, 307, 362, 364, 1629
HinP1I GCGC 8 cut(s) 109, 134, 180, 231, 307, 362, 364, 1629
HindIII AAGCTT 1 cut(s) 1061
HinfI GANTC 9 cut(s) 236, 242, 254, 296, 871, 1032, 1090, 1466, 1586
HpaII CCGG 2 cut(s) 444, 479
HphI GGTGA 3 cut(s) 11, 178, 502
Hpy166II GTNNAC 1 cut(s) 1245
Hpy188I TCNGA 8 cut(s) 124, 241, 247, 259, 415, 749, 1341, 1471
Hpy188III TCNNGA 5 cut(s) 205, 379, 919, 1406, 1550
Hpy8I GTNNAC 1 cut(s) 1245
Hpy99I CGWCG 9 cut(s) 64, 179, 200, 251, 275, 278, 281, 475, 1098
HpyAV CCTTC 5 cut(s) 151, 166, 487, 985, 1346
HpyCH4III ACNGT 3 cut(s) 38, 397, 457
HpyCH4IV ACGT 3 cut(s) 751, 1270, 1396
HpyCH4V TGCA 8 cut(s) 824, 890, 1047, 1351, 1394, 1526, 1532, 1609
HpyF10VI GCNNNNNNNGC 7 cut(s) 49, 228, 359, 548, 821, 830, 1286
HpyF3I CTNAG 2 cut(s) 123, 1455
HpySE526I ACGT 3 cut(s) 751, 1270, 1396
Hsp92I GRCGYC 2 cut(s) 231, 1629
Hsp92II CATG 8 cut(s) 307, 688, 761, 890, 1007, 1330, 1355, 1361
HspAI GCGC 8 cut(s) 109, 134, 180, 231, 307, 362, 364, 1629
KasI GGCGCC 2 cut(s) 230, 1628
Ksp22I TGATCA 1 cut(s) 1252
KspI CCGCGG 2 cut(s) 223, 354
Kzo9I GATC 3 cut(s) 1252, 1429, 1438
LmnI GCTCC 7 cut(s) 45, 350, 539, 559, 723, 1277, 1471
LweI GCATC 4 cut(s) 219, 1354, 1381, 1498
MaeI CTAG 1 cut(s) 552
MaeII ACGT 3 cut(s) 751, 1270, 1396
MaeIII GTNAC 2 cut(s) 1142, 1483
MalI GATC 3 cut(s) 1254, 1431, 1440
MbiI CCGCTC 1 cut(s) 323
MboI GATC 3 cut(s) 1252, 1429, 1438
MboII GAAGA 3 cut(s) 6, 580, 667
MfeI CAATTG 1 cut(s) 1110
MflI RGATCY 2 cut(s) 1429, 1438
MhlI GDGCHC 3 cut(s) 50, 1134, 1336
MlsI TGGCCA 2 cut(s) 1263, 1372
MluCI AATT 9 cut(s) 367, 388, 409, 510, 1110, 1138, 1256, 1543, 1635
MluNI TGGCCA 2 cut(s) 1263, 1372
Mly113I GGCGCC 2 cut(s) 231, 1629
MlyI GAGTC 5 cut(s) 230, 236, 263, 290, 1475
MmeI TCCRAC 5 cut(s) 57, 216, 264, 270, 1449
Mox20I TGGCCA 2 cut(s) 1263, 1372
Mph1103I ATGCAT 1 cut(s) 1353
MscI TGGCCA 2 cut(s) 1263, 1372
MseI TTAA 4 cut(s) 399, 423, 878, 957
MslI CAYNNNNRTG 2 cut(s) 1356, 1362
Msp20I TGGCCA 2 cut(s) 1263, 1372
MspA1I CMGCKG 4 cut(s) 222, 339, 353, 833
MspI CCGG 2 cut(s) 444, 479
MspR9I CCNGG 7 cut(s) 445, 480, 670, 986, 1158, 1224, 1579
MunI CAATTG 1 cut(s) 1110
Mva1269I GAATGC 3 cut(s) 445, 1049, 1306
MvaI CCWGG 5 cut(s) 670, 986, 1158, 1224, 1579
MvnI CGCG 8 cut(s) 43, 119, 134, 174, 222, 353, 364, 503
MwoI GCNNNNNNNGC 7 cut(s) 49, 228, 359, 548, 821, 830, 1286
NarI GGCGCC 2 cut(s) 231, 1629
NciI CCSGG 2 cut(s) 445, 480
NdeI CATATG 2 cut(s) 633, 787
NdeII GATC 3 cut(s) 1252, 1429, 1438
NlaIII CATG 8 cut(s) 307, 688, 761, 890, 1007, 1330, 1355, 1361
NmeAIII GCCGAG 3 cut(s) 53, 246, 338
NmuCI GTSAC 1 cut(s) 1142
NsbI TGCGCA 1 cut(s) 308
NsiI ATGCAT 1 cut(s) 1353
NspI RCATGY 2 cut(s) 688, 890
NspV TTCGAA 2 cut(s) 371, 611
PaeR7I CTCGAG 1 cut(s) 203
PauI GCGCGC 1 cut(s) 362
PcsI WCGNNNNNNNCGW 5 cut(s) 56, 201, 255, 273, 285
PctI GAATGC 3 cut(s) 445, 1049, 1306
PfeI GAWTC 4 cut(s) 871, 1032, 1090, 1586
PflFI GACNNNGTC 1 cut(s) 1450
PkrI GCNGC 8 cut(s) 224, 227, 230, 322, 341, 344, 352, 355
PleI GAGTC 5 cut(s) 230, 236, 262, 290, 1474
PluTI GGCGCC 2 cut(s) 234, 1632
PmaCI CACGTG 1 cut(s) 1397
PmlI CACGTG 1 cut(s) 1397
PpsI GAGTC 5 cut(s) 230, 236, 262, 290, 1474
Ppu21I YACGTR 1 cut(s) 1397
PpuMI RGGWCCY 1 cut(s) 447
Psp124BI GAGCTC 2 cut(s) 50, 1134
Psp5II RGGWCCY 1 cut(s) 447
Psp6I CCWGG 5 cut(s) 668, 984, 1156, 1222, 1577
PspCI CACGTG 1 cut(s) 1397
PspFI CCCAGC 1 cut(s) 1238
PspGI CCWGG 5 cut(s) 668, 984, 1156, 1222, 1577
PspPI GGNCC 5 cut(s) 127, 262, 447, 461, 1245
PspPPI RGGWCCY 1 cut(s) 447
PsuI RGATCY 2 cut(s) 1429, 1438
PsyI GACNNNGTC 1 cut(s) 1450
PteI GCGCGC 1 cut(s) 362
PvuII CAGCTG 1 cut(s) 833
RsaI GTAC 2 cut(s) 454, 698
RsaNI GTAC 2 cut(s) 453, 697
RseI CAYNNNNRTG 2 cut(s) 1356, 1362
SacI GAGCTC 2 cut(s) 50, 1134
SacII CCGCGG 2 cut(s) 223, 354
SaqAI TTAA 4 cut(s) 399, 423, 878, 957
SatI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 343, 351, 354
Sau3AI GATC 3 cut(s) 1252, 1429, 1438
Sau96I GGNCC 5 cut(s) 127, 262, 447, 461, 1245
SchI GAGTC 5 cut(s) 230, 236, 263, 290, 1475
ScrFI CCNGG 7 cut(s) 445, 480, 670, 986, 1158, 1224, 1579
SduI GDGCHC 3 cut(s) 50, 1134, 1336
SfaNI GCATC 4 cut(s) 219, 1354, 1381, 1498
SfoI GGCGCC 2 cut(s) 232, 1630
Sfr274I CTCGAG 1 cut(s) 203
Sfr303I CCGCGG 2 cut(s) 223, 354
SfuI TTCGAA 2 cut(s) 371, 611
SgrBI CCGCGG 2 cut(s) 223, 354
SinI GGWCC 3 cut(s) 127, 447, 1245
SlaI CTCGAG 1 cut(s) 203
SmiMI CAYNNNNRTG 2 cut(s) 1356, 1362
SmlI CTYRAG 4 cut(s) 203, 377, 593, 1228
SmoI CTYRAG 4 cut(s) 203, 377, 593, 1228
Sse9I AATT 9 cut(s) 367, 388, 409, 510, 1110, 1138, 1256, 1543, 1635
SspDI GGCGCC 2 cut(s) 230, 1628
SspMI CTAG 1 cut(s) 552
SstI GAGCTC 2 cut(s) 50, 1134
StyD4I CCNGG 7 cut(s) 443, 478, 668, 984, 1156, 1222, 1577
StyI CCWWGG 1 cut(s) 690
TaaI ACNGT 3 cut(s) 38, 397, 457
TaiI ACGT 3 cut(s) 754, 1273, 1399
TaqI TCGA 9 cut(s) 204, 288, 330, 371, 611, 706, 781, 1212, 1389
TasI AATT 9 cut(s) 367, 388, 409, 510, 1110, 1138, 1256, 1543, 1635
TatI WGTACW 1 cut(s) 696
TauI GCSGC 8 cut(s) 225, 228, 231, 323, 342, 345, 353, 356
TfiI GAWTC 4 cut(s) 871, 1032, 1090, 1586
Tru1I TTAA 4 cut(s) 399, 423, 878, 957
Tru9I TTAA 4 cut(s) 399, 423, 878, 957
TscAI CASTG 2 cut(s) 322, 541
TseFI GTSAC 1 cut(s) 1142
Tsp45I GTSAC 1 cut(s) 1142
TspDTI ATGAA 4 cut(s) 852, 884, 1131, 1315
TspGWI ACGGA 1 cut(s) 398
TspRI CASTG 2 cut(s) 322, 541
Tth111I GACNNNGTC 1 cut(s) 1450
VpaK11BI GGWCC 3 cut(s) 127, 447, 1245
XagI CCTNNNNNAGG 1 cut(s) 989
XapI RAATTY 4 cut(s) 388, 409, 510, 1635
XceI RCATGY 2 cut(s) 688, 890
XcmI CCANNNNNNNNNTGG 1 cut(s) 1271
XhoI CTCGAG 1 cut(s) 203
XspI CTAG 1 cut(s) 552
Zsp2I ATGCAT 1 cut(s) 1353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.