Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011843

Physical Location & Seq

Genomic Coordinates Reverse (-)

28434524 .. 28435489

Gene Structure 966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G75720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 588 bp

ATGATGGAGACAACGAAGAGAGCAGAGATCGACACAACGGCACCGTTTAGAACCGTCAAAGAAGCCGTTGCTTTGTTCGGCGAGAGAGTCTTAGCCAGTCAAGTCTACTCGAACCATCTCAAAGTGATACAGATGCATGATGAGAAATGGGAAGATCCATCAGGGATTAAGATAGAGCTTCAAGAGACAAGATATGATCTCAAAAGGGCAAAAGAAGAAAGCATACAAATGAGGAACTCTTTGTCTTGTCTCAAGGAAGAGCTTGAACGAACAAAACAAGAGCTCCAGAAGCTGAGAGTTGATCCTGGGGTAAACGAAACGAAACTCGACGAGACTGTTTTTAAAACCAAGTTTGAAGTGTTAGTTCCTCGGGTTGATGATGAGCCAATTAGAAGTCCGAGGTTGAGATCGATGAGTGAGAAGAGATACGTGAAATTTGCAAACCCTACTGGTAATAATGGCTCGGTGTTTCTTGAGAGACATCCTTCAATGAAAAAGAAGGAGAAGAAGACAAAGGATAAGAAGAAGAAGAGTTTAATCCCTTTGTTTATTGGAGGGATTTTTTCTAAGAAAAAGGTTTTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

195

Amino Acids

22.72

Weight (kDa)

9.68

Isoelectric Point (pI)

45.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0011843)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75720 AT1G75720 AT1G75720
fragaria_vesca	FvH4_2g38540
malus_domestica	MD08G1013500.v1.1 MD15G1013000.v1.1
prunus_persica	Prupe.1G366100_v2.0.a1
pyrus_communis	pycom08g01190 pycom15g01130
rosa_chinensis	RchiOBHm_Chr6g0302771
rosa_laevigata	RLG00000011139
rosa_roxburghii	Rroxscaffold_7G00165340
rosa_rugosa	Rorug06G0316700 Rorug06G0316800
rosa_samantha	Rh6AG430200 Rh6BG472400 Rh6CG442700 Rh6DG429400
rosa_wichuraiana	Rw6G037260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	40
AccI	GTMKAC	1 cut(s)	105
AclWI	GGATC	2 cut(s)	149, 296
AcsI	RAATTY	1 cut(s)	434
AgsI	TTSAA	4 cut(s)	182, 266, 356, 489
AjnI	CCWGG	1 cut(s)	304
AluBI	AGCT	4 cut(s)	178, 262, 283, 292
AluI	AGCT	4 cut(s)	178, 262, 283, 292
Alw21I	GWGCWC	1 cut(s)	285
Alw26I	GTCTC	5 cut(s)	2, 179, 254, 326, 472
AlwI	GGATC	2 cut(s)	149, 296
AlwNI	CAGNNNCTG	1 cut(s)	292
Ama87I	CYCGRG	1 cut(s)	369
ApoI	RAATTY	1 cut(s)	434
AvaI	CYCGRG	1 cut(s)	369
BanI	GGYRCC	1 cut(s)	40
BanII	GRGCYC	1 cut(s)	285
BarI	GAAGNNNNNNTAC	2 cut(s)	207, 239
BbsI	GAAGAC	1 cut(s)	515
Bbv12I	GWGCWC	1 cut(s)	285
BccI	CCATC	2 cut(s)	123, 166
BceAI	ACGGC	2 cut(s)	50, 54
BciT130I	CCWGG	1 cut(s)	306
BcoDI	GTCTC	5 cut(s)	2, 179, 254, 326, 472
Bme1390I	CCNGG	1 cut(s)	306
BmeT110I	CYCGRG	1 cut(s)	369
BmiI	GGNNCC	1 cut(s)	42
BmrFI	CCNGG	1 cut(s)	306
BmsI	GCATC	1 cut(s)	123
BpiI	GAAGAC	1 cut(s)	515
BpmI	CTGGAG	1 cut(s)	269
BpuEI	CTTGAG	2 cut(s)	236, 494
Bsa29I	ATCGAT	1 cut(s)	410
BsaAI	YACGTR	1 cut(s)	430
BsaJI	CCNNGG	3 cut(s)	305, 368, 398
BsaXI	ACNNNNNCTCC	2 cut(s)	267, 297
Bse1I	ACTGG	2 cut(s)	96, 454
BseBI	CCWGG	1 cut(s)	306
BseCI	ATCGAT	1 cut(s)	410
BseDI	CCNNGG	3 cut(s)	305, 368, 398
BseGI	GGATG	1 cut(s)	481
BseMII	CTCAG	1 cut(s)	284
BseNI	ACTGG	2 cut(s)	96, 454
BshNI	GGYRCC	1 cut(s)	40
BshVI	ATCGAT	1 cut(s)	410
BsiHKAI	GWGCWC	1 cut(s)	285
BsiHKCI	CYCGRG	1 cut(s)	369
BsmAI	GTCTC	5 cut(s)	2, 179, 254, 326, 472
BsoBI	CYCGRG	1 cut(s)	369
Bsp1286I	GDGCHC	1 cut(s)	285
Bsp143I	GATC	5 cut(s)	27, 154, 196, 301, 407
BspCNI	CTCAG	1 cut(s)	285
BspDI	ATCGAT	1 cut(s)	410
BspLI	GGNNCC	1 cut(s)	42
BspPI	GGATC	2 cut(s)	149, 296
BspQI	GCTCTTC	1 cut(s)	252
BspT107I	GGYRCC	1 cut(s)	40
BsrI	ACTGG	2 cut(s)	96, 454
BssECI	CCNNGG	3 cut(s)	305, 368, 398
BssMI	GATC	5 cut(s)	27, 154, 196, 301, 407
Bst2UI	CCWGG	1 cut(s)	306
Bst4CI	ACNGT	3 cut(s)	45, 55, 337
Bst6I	CTCTTC	4 cut(s)	11, 252, 416, 524
BstBAI	YACGTR	1 cut(s)	430
BstDEI	CTNAG	3 cut(s)	91, 293, 567
BstF5I	GGATG	1 cut(s)	481
BstKTI	GATC	5 cut(s)	30, 157, 199, 304, 410
BstMAI	GTCTC	5 cut(s)	2, 179, 254, 326, 472
BstMBI	GATC	5 cut(s)	27, 154, 196, 301, 407
BstMWI	GCNNNNNNNGC	1 cut(s)	289
BstNI	CCWGG	1 cut(s)	306
BstSCI	CCNGG	1 cut(s)	304
BstV2I	GAAGAC	1 cut(s)	515
BstX2I	RGATCY	1 cut(s)	154
BstYI	RGATCY	1 cut(s)	154
Bsu15I	ATCGAT	1 cut(s)	410
BsuTUI	ATCGAT	1 cut(s)	410
BtsCI	GGATG	1 cut(s)	481
CaiI	CAGNNNCTG	1 cut(s)	292
ClaI	ATCGAT	1 cut(s)	410
CviAII	CATG	1 cut(s)	137
CviJI	RGCY	8 cut(s)	65, 95, 178, 262, 283, 292, 385, 462
CviKI_1	RGCY	8 cut(s)	65, 95, 178, 262, 283, 292, 385, 462
DdeI	CTNAG	3 cut(s)	91, 293, 567
DpnI	GATC	5 cut(s)	29, 156, 198, 303, 409
DpnII	GATC	5 cut(s)	27, 154, 196, 301, 407
DraI	TTTAAA	1 cut(s)	343
Eam1104I	CTCTTC	4 cut(s)	11, 252, 416, 524
EarI	CTCTTC	4 cut(s)	11, 252, 416, 524
Ecl136II	GAGCTC	1 cut(s)	283
Eco24I	GRGCYC	1 cut(s)	285
Eco53kI	GAGCTC	1 cut(s)	283
Eco88I	CYCGRG	1 cut(s)	369
EcoICRI	GAGCTC	1 cut(s)	283
EcoRII	CCWGG	1 cut(s)	304
EcoT22I	ATGCAT	1 cut(s)	138
EcoT38I	GRGCYC	1 cut(s)	285
FaeI	CATG	1 cut(s)	140
FaiI	YATR	3 cut(s)	138, 195, 224
FatI	CATG	1 cut(s)	136
FblI	GTMKAC	1 cut(s)	105
FokI	GGATG	1 cut(s)	468
FriOI	GRGCYC	1 cut(s)	285
GsuI	CTGGAG	1 cut(s)	269
Hin1II	CATG	1 cut(s)	140
HinfI	GANTC	1 cut(s)	87
Hpy166II	GTNNAC	2 cut(s)	106, 313
Hpy188I	TCNGA	1 cut(s)	399
Hpy188III	TCNNGA	3 cut(s)	182, 286, 473
Hpy8I	GTNNAC	2 cut(s)	106, 313
Hpy99I	CGWCG	1 cut(s)	332
HpyAV	CCTTC	2 cut(s)	493, 495
HpyCH4III	ACNGT	3 cut(s)	45, 55, 337
HpyCH4IV	ACGT	1 cut(s)	429
HpyCH4V	TGCA	3 cut(s)	136, 440, 583
HpyF10VI	GCNNNNNNNGC	1 cut(s)	289
HpyF3I	CTNAG	3 cut(s)	91, 293, 567
HpySE526I	ACGT	1 cut(s)	429
Hsp92II	CATG	1 cut(s)	140
Kzo9I	GATC	5 cut(s)	27, 154, 196, 301, 407
LguI	GCTCTTC	1 cut(s)	252
LmnI	GCTCC	1 cut(s)	288
LpnPI	CCDG	6 cut(s)	109, 147, 291, 299, 318, 435
LweI	GCATC	1 cut(s)	123
MaeII	ACGT	1 cut(s)	429
MalI	GATC	5 cut(s)	29, 156, 198, 303, 409
MboI	GATC	5 cut(s)	27, 154, 196, 301, 407
MflI	RGATCY	1 cut(s)	154
MhlI	GDGCHC	1 cut(s)	285
MluCI	AATT	2 cut(s)	387, 434
MlyI	GAGTC	1 cut(s)	96
MnlI	CCTC	4 cut(s)	225, 378, 393, 548
Mph1103I	ATGCAT	1 cut(s)	138
MseI	TTAA	3 cut(s)	168, 342, 536
MslI	CAYNNNNRTG	1 cut(s)	227
MspR9I	CCNGG	1 cut(s)	306
MvaI	CCWGG	1 cut(s)	306
MwoI	GCNNNNNNNGC	1 cut(s)	289
NdeII	GATC	5 cut(s)	27, 154, 196, 301, 407
NlaIII	CATG	1 cut(s)	140
NlaIV	GGNNCC	1 cut(s)	42
NsiI	ATGCAT	1 cut(s)	138
PciSI	GCTCTTC	1 cut(s)	252
PleI	GAGTC	1 cut(s)	95
PpsI	GAGTC	1 cut(s)	95
Ppu21I	YACGTR	1 cut(s)	430
Psp124BI	GAGCTC	1 cut(s)	285
Psp6I	CCWGG	1 cut(s)	304
PspGI	CCWGG	1 cut(s)	304
PspN4I	GGNNCC	1 cut(s)	42
PstNI	CAGNNNCTG	1 cut(s)	292
PsuI	RGATCY	1 cut(s)	154
RseI	CAYNNNNRTG	1 cut(s)	227
SacI	GAGCTC	1 cut(s)	285
SapI	GCTCTTC	1 cut(s)	252
SaqAI	TTAA	3 cut(s)	168, 342, 536
Sau3AI	GATC	5 cut(s)	27, 154, 196, 301, 407
SchI	GAGTC	1 cut(s)	96
ScrFI	CCNGG	1 cut(s)	306
SduI	GDGCHC	1 cut(s)	285
SetI	ASST	7 cut(s)	180, 264, 285, 294, 404, 432, 579
SfaNI	GCATC	1 cut(s)	123
SmiMI	CAYNNNNRTG	1 cut(s)	227
SmlI	CTYRAG	2 cut(s)	251, 473
SmoI	CTYRAG	2 cut(s)	251, 473
Sse9I	AATT	2 cut(s)	387, 434
SstI	GAGCTC	1 cut(s)	285
StyD4I	CCNGG	1 cut(s)	304
TaaI	ACNGT	3 cut(s)	45, 55, 337
TaiI	ACGT	1 cut(s)	432
TaqI	TCGA	4 cut(s)	30, 110, 327, 410
TasI	AATT	2 cut(s)	387, 434
Tru1I	TTAA	3 cut(s)	168, 342, 536
Tru9I	TTAA	3 cut(s)	168, 342, 536
TspDTI	ATGAA	1 cut(s)	506
XapI	RAATTY	1 cut(s)	434
XmiI	GTMKAC	1 cut(s)	105
Zsp2I	ATGCAT	1 cut(s)	138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.