Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0007668

Physical Location & Seq

Genomic Coordinates Reverse (-)

3567709 .. 3572742

Gene Structure 5034 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1047300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGCATGTCGCGGGAGTGAGCTTGGATCTGAATTGGTTCCTGCACTTCATATTTACAGTTTTTATAATCGCCTTCTGTTTGCTGCACCTGGTGAAGAACACGGCGTCGAAGTACTTTGAGGTCGACGCCAGCTTCGAGGGAGGAGGTGACGGGGGTGATCGGACCCCAATGCCTGGCGCGTTCATGGAGGATCCTGTTTGTGCTGTCTGTGGGAATTCGGGTTCCAGGAGGTGCTCTCGCTGCAAGGCTGTTAGATACTGCTCAACGAAATGCCAAGAAAAGCATTGGAAGTCAGGGCATAAGACAGAATGCAAGGACTTTCAACTATCTGGCAGAGTGAATTCAGCTCAGAACACATTGGGTAATCGGAGATTTAAAACTTCTGGTGCTGGAGGAAAAACTTCCCCTGGACTTGCACTTGTTCCTGCTCGTGGAATCTCTAGGCCTATCAAGATGCCTAAAGAGATTCTTTTTCCCTATGAAGAATTTGTTGAACTTTTCAATTGGGACAAGCCAGGGTTTCCTCCTTGCGGACTCTTAAATTGTGGAAACAGTTGCTTTGCCAATGTGGTTCTACAGTGTCTTTCATCCACTCGACCGCTTGTTGCCTACTTGTTAGAGAAGGGCCATCGGAGAGAATGCATACGTGAAGACTGGTGCTTCCTGTGTGAACTCGAAATCCATCTTCAAAAAGCTAGCCAAAGTTTGCAGTCCTTTTCACCAACCAACATTATCTCTAGATTACCAAATATTGGTGGTAATCTTGGCTACGGGAGGCAGGAGGATGCTCATGAACTCATGAGGTTTGCCATTGATACAATGCAGTCGTTGTGTCTTGATGAGTTTGGTGGAGAGAAAGCTGTGTGTCCAAGCTCTCAAGAGACAACGTTAATTCAACATATATTTGGTGGCCAACTACAGTCTCAGGTGATTTGTACAAATTGCAAGAATATATCAAATCAATATGAAAATATGATGGATTTAACTGTTGAAATTCACGGGGATGCTTCATCATTAGAGGAATGTCTAGATCAATTCACCATCAAGGAGTGGCTTCATGGAGAAAATATGTATAAATGCGATGGGTGCAATGACTATGTCAAGGCTTGGAAGCGTCTTACCGTTAAACGCGCTCCAAATATTCTCACAATTGCCTTGAAAAGATTTCAGAGTGGACGGTTTGGGAAAATTAACAAGAGAGTAACATTTCCGGAAACATTAGATCTTAACCCCTACATGAGTGAAGCGGGAGATGGTACCAATATTTACAAGCTGTATGCCGTTGTTGTCCATATTGATATGCTGAATGCTTCATTTTTCGGACACTATATCTGTTATACCAAGGATTTCAGTGGAAACTGGTACAGAATCGACGACTGTAAGGTTACGACCGTAAATTTGGAAGAGGTACTTTCCCAGGGAGCATATATGCTACTATATAGCAGGGTTCAGCCACGAGCATCATGTCTAAGGACCCTCGAACCCCCGAAGAAAAAGGAGGAAATGATGAATGTTGAAGTAGAGGCTTGCCAAAAGGAACAACTTGGATGTTCCACTGCCGAGTCTGCAGATCCTACCCACTGTTCTGGCTCTGTGCCATCTGACACTACATTGCTGCCACAGATTCCAAGCTCTGTAACAGAATCGGCTGCTGTAATTGACGCTGAGGTTGTCCTAGAACACTCTGATAATGTGGATCGCAGGCTTAAATCACCGCCAACTGTTTCAAAAGAGGTTTGCATAGTTGAAAATGGTGCGGTTAATTCCCCGTCTTGTCCATCTGTTTCAAGGGAGATTTCTATATGCAAGGACCCTGCTGGTGAGTTGGATTTGGATACCGTAAGAGGTGATTCAACTCCAGCTCCAGATGGTATGGATATGTCTAATGGTGACTCATGTCAGGCTATTCTGGACGATGTATCAGCACGCTGCAAGAAGGATCTCTCTTCTTCAGGTCGTGAAGCTGAAAATGGCGTTTCCCAAGATATGGATATCGATCATTGTGAGTCAAGTTCATCCCCTGCAGAGGACATTCAAATTTGCCGGAGCAATGGGCCAACGACTCGAGCAAATGGGAATGGTTCTCCAGTTGTGAATTCTGGTTTTCTGAACGGGAACGGAATCCACAGAACAAAAAAAAGTAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

716

Amino Acids

78.84

Weight (kDa)

5.79

Isoelectric Point (pI)

54.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	67 - 104	3.3e-11	MYND finger
UCH	PF00443	177 - 480	2.4e-53	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	178 - 462	9.5e-20	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007668)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24640 AT2G24640 AT4G31670
fragaria_vesca	FvH4_2g37100
malus_domestica	MD08G1047300.v1.1 MD15G1046600.v1.1
prunus_persica	Prupe.1G401000_v2.0.a1 Prupe.1G401000_v2.0.a1
pyrus_communis	pycom08g03970 pycom15g04430
rosa_chinensis	RchiOBHm_Chr6g0304691
rosa_multiflora	Rmu_sc0003341.1_g000007
rosa_roxburghii	Rroxscaffold_7G00163590
rosa_rugosa	Rorug06G0333000 Rorug06G0333100 Rorug06G0333200 Rorug06G0333300 Rorug06G0333400 Rorug06G0333500
rosa_samantha	Rh6AG445600 Rh6BG456300 Rh6CG458500 Rh6DG445700
rosa_wichuraiana	Rw6G038750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	65
Acc65I	GGTACC	1 cut(s)	1256
AccB1I	GGYRCC	1 cut(s)	1256
AccB7I	CCANNNNNTGG	3 cut(s)	173, 752, 1987
AccI	GTMKAC	1 cut(s)	123
AccII	CGCG	3 cut(s)	11, 179, 1131
AccIII	TCCGGA	1 cut(s)	1210
AciI	CCGC	6 cut(s)	11, 531, 599, 1247, 1715, 1757
AclI	AACGTT	1 cut(s)	887
AclWI	GGATC	6 cut(s)	33, 185, 198, 1565, 1704, 1947
AcoI	YGGCCR	1 cut(s)	910
AcsI	RAATTY	7 cut(s)	214, 340, 485, 993, 1396, 2037, 2095
AcuI	CTGAAG	1 cut(s)	1935
AcyI	GRCGYC	2 cut(s)	104, 126
AdeI	CACNNNGTG	1 cut(s)	91
AfaI	GTAC	5 cut(s)	113, 937, 1258, 1364, 1410
AfiI	CCNNNNNNNGG	6 cut(s)	173, 431, 530, 752, 1987, 2026
AjnI	CCWGG	6 cut(s)	87, 172, 224, 406, 514, 1416
AloI	GAACNNNNNNTCC	4 cut(s)	205, 237, 663, 695
Alw21I	GWGCWC	1 cut(s)	236
Alw26I	GTCTC	2 cut(s)	875, 927
AlwI	GGATC	6 cut(s)	33, 185, 198, 1565, 1704, 1947
Ama87I	CYCGRG	1 cut(s)	2064
Aor13HI	TCCGGA	1 cut(s)	1210
AoxI	GGCC	4 cut(s)	443, 625, 910, 2054
ApeKI	GCWGC	5 cut(s)	82, 240, 1615, 1649, 1929
ApoI	RAATTY	7 cut(s)	214, 340, 485, 993, 1396, 2037, 2095
ArsI	GACNNNNNNTTYG	4 cut(s)	116, 148, 1381, 1413
Asp700I	GAANNNNTTC	2 cut(s)	35, 400
Asp718I	GGTACC	1 cut(s)	1256
AspLEI	GCGC	2 cut(s)	179, 1133
AspS9I	GGNCC	5 cut(s)	162, 625, 1473, 1810, 2054
AsuNHI	GCTAGC	1 cut(s)	695
AvaI	CYCGRG	1 cut(s)	2064
AvaII	GGWCC	3 cut(s)	162, 1473, 1810
BalI	TGGCCA	1 cut(s)	912
BamHI	GGATCC	1 cut(s)	190
BanI	GGYRCC	1 cut(s)	1256
BauI	CACGAG	2 cut(s)	429, 1455
BbsI	GAAGAC	1 cut(s)	657
Bbv12I	GWGCWC	1 cut(s)	236
BbvCI	CCTCAGC	1 cut(s)	1665
BbvI	GCAGC	5 cut(s)	69, 227, 1602, 1636, 1916
BccI	CCATC	9 cut(s)	636, 690, 970, 1049, 1076, 1247, 1606, 1786, 1862
BceAI	ACGGC	2 cut(s)	117, 1265
BciT130I	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
BciVI	GTATCC	1 cut(s)	1828
BcoDI	GTCTC	2 cut(s)	875, 927
BfaI	CTAG	5 cut(s)	441, 696, 738, 1028, 1676
BfmI	CTRYAG	4 cut(s)	575, 917, 1566, 2022
BfuI	GTATCC	1 cut(s)	1828
BglII	AGATCT	1 cut(s)	1222
BisI	GCNGC	5 cut(s)	83, 241, 1616, 1650, 1930
BlsI	GCNGC	5 cut(s)	84, 242, 1617, 1651, 1931
BmcAI	AGTACT	1 cut(s)	113
Bme1390I	CCNGG	6 cut(s)	89, 174, 226, 408, 516, 1418
Bme18I	GGWCC	3 cut(s)	162, 1473, 1810
BmeT110I	CYCGRG	1 cut(s)	2064
BmgT120I	GGNCC	5 cut(s)	162, 625, 1473, 1810, 2054
BmiI	GGNNCC	7 cut(s)	38, 164, 192, 223, 1258, 1475, 1812
BmrFI	CCNGG	6 cut(s)	89, 174, 226, 408, 516, 1418
BmsI	GCATC	4 cut(s)	444, 775, 994, 1469
BmtI	GCTAGC	1 cut(s)	699
BoxI	GACNNNNGTC	1 cut(s)	1896
BpiI	GAAGAC	1 cut(s)	657
BplI	GAGNNNNNCTC	2 cut(s)	220, 252
BpmI	CTGGAG	4 cut(s)	411, 1842, 1848, 2070
Bpu10I	CCTNAGC	1 cut(s)	1665
BpuEI	CTTGAG	1 cut(s)	861
Bsa29I	ATCGAT	1 cut(s)	1995
BsaAI	YACGTR	1 cut(s)	647
BsaBI	GATNNNNATC	1 cut(s)	1995
BsaHI	GRCGYC	2 cut(s)	104, 126
BsaJI	CCNNGG	5 cut(s)	406, 515, 1341, 1416, 1417
BsaWI	WCCGGW	1 cut(s)	1210
BsaXI	ACNNNNNCTCC	2 cut(s)	1846, 1876
Bsc4I	CCNNNNNNNGG	6 cut(s)	173, 431, 530, 752, 1987, 2026
Bse1I	ACTGG	3 cut(s)	659, 1364, 2087
Bse3DI	GCAATG	3 cut(s)	1096, 1610, 2056
Bse8I	GATNNNNATC	1 cut(s)	1995
BseAI	TCCGGA	1 cut(s)	1210
BseBI	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
BseCI	ATCGAT	1 cut(s)	1995
BseDI	CCNNGG	5 cut(s)	406, 515, 1341, 1416, 1417
BseGI	GGATG	5 cut(s)	587, 790, 1009, 1553, 2015
BseJI	GATNNNNATC	1 cut(s)	1995
BseLI	CCNNNNNNNGG	6 cut(s)	173, 431, 530, 752, 1987, 2026
BseMI	GCAATG	3 cut(s)	1096, 1610, 2056
BseMII	CTCAG	3 cut(s)	362, 938, 1656
BseNI	ACTGG	3 cut(s)	659, 1364, 2087
BseRI	GAGGAG	1 cut(s)	156
BseXI	GCAGC	5 cut(s)	69, 227, 1602, 1636, 1916
BsgI	GTGCAG	2 cut(s)	26, 68
Bsh1236I	CGCG	3 cut(s)	11, 179, 1131
Bsh1285I	CGRYCG	2 cut(s)	599, 1392
BshFI	GGCC	4 cut(s)	445, 627, 912, 2056
BshNI	GGYRCC	1 cut(s)	1256
BshVI	ATCGAT	1 cut(s)	1995
BsiEI	CGRYCG	2 cut(s)	599, 1392
BsiHKAI	GWGCWC	1 cut(s)	236
BsiHKCI	CYCGRG	1 cut(s)	2064
BsiSI	CCGG	2 cut(s)	1211, 2044
BslFI	GGGAC	1 cut(s)	521
BslI	CCNNNNNNNGG	6 cut(s)	173, 431, 530, 752, 1987, 2026
BsmAI	GTCTC	2 cut(s)	875, 927
BsmFI	GGGAC	1 cut(s)	521
BsmI	GAATGC	3 cut(s)	314, 644, 1312
BsnI	GGCC	4 cut(s)	445, 627, 912, 2056
BsoBI	CYCGRG	1 cut(s)	2064
Bsp1286I	GDGCHC	1 cut(s)	236
Bsp13I	TCCGGA	1 cut(s)	1210
Bsp1407I	TGTACA	1 cut(s)	935
Bsp143I	GATC	9 cut(s)	25, 157, 190, 1030, 1222, 1570, 1696, 1939, 1996
BspACI	CCGC	6 cut(s)	11, 531, 599, 1247, 1715, 1757
BspANI	GGCC	4 cut(s)	445, 627, 912, 2056
BspCNI	CTCAG	3 cut(s)	361, 937, 1657
BspDI	ATCGAT	1 cut(s)	1995
BspEI	TCCGGA	1 cut(s)	1210
BspFNI	CGCG	3 cut(s)	11, 179, 1131
BspHI	TCATGA	2 cut(s)	790, 798
BspLI	GGNNCC	7 cut(s)	38, 164, 192, 223, 1258, 1475, 1812
BspMAI	CTGCAG	2 cut(s)	1570, 2026
BspOI	GCTAGC	1 cut(s)	699
BspPI	GGATC	6 cut(s)	33, 185, 198, 1565, 1704, 1947
BspT107I	GGYRCC	1 cut(s)	1256
BsrDI	GCAATG	3 cut(s)	1096, 1610, 2056
BsrGI	TGTACA	1 cut(s)	935
BsrI	ACTGG	3 cut(s)	659, 1364, 2087
BssECI	CCNNGG	5 cut(s)	406, 515, 1341, 1416, 1417
BssMI	GATC	9 cut(s)	25, 157, 190, 1030, 1222, 1570, 1696, 1939, 1996
BssNI	GRCGYC	2 cut(s)	104, 126
BssSI	CACGAG	2 cut(s)	429, 1455
BssT1I	CCWWGG	1 cut(s)	1341
Bst2BI	CACGAG	2 cut(s)	429, 1455
Bst2UI	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
Bst6I	CTCTTC	2 cut(s)	1398, 1951
BstACI	GRCGYC	2 cut(s)	104, 126
BstAUI	TGTACA	1 cut(s)	935
BstBAI	YACGTR	1 cut(s)	647
BstC8I	GCNNGC	5 cut(s)	130, 697, 1528, 1703, 1927
BstDEI	CTNAG	4 cut(s)	348, 924, 1469, 1665
BstF5I	GGATG	5 cut(s)	587, 790, 1009, 1553, 2015
BstFNI	CGCG	3 cut(s)	11, 179, 1131
BstHHI	GCGC	2 cut(s)	179, 1133
BstKTI	GATC	9 cut(s)	28, 160, 193, 1033, 1225, 1573, 1699, 1942, 1999
BstMAI	GTCTC	2 cut(s)	875, 927
BstMBI	GATC	9 cut(s)	25, 157, 190, 1030, 1222, 1570, 1696, 1939, 1996
BstMCI	CGRYCG	2 cut(s)	599, 1392
BstMWI	GCNNNNNNNGC	3 cut(s)	240, 1086, 1565
BstNI	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
BstNSI	RCATGY	1 cut(s)	8
BstPAI	GACNNNNGTC	1 cut(s)	1896
BstSCI	CCNGG	6 cut(s)	87, 172, 224, 406, 514, 1416
BstSFI	CTRYAG	4 cut(s)	575, 917, 1566, 2022
BstUI	CGCG	3 cut(s)	11, 179, 1131
BstV1I	GCAGC	5 cut(s)	69, 227, 1602, 1636, 1916
BstV2I	GAAGAC	1 cut(s)	657
BstX2I	RGATCY	5 cut(s)	25, 190, 1222, 1570, 1939
BstXI	CCANNNNNNTGG	1 cut(s)	1586
BstYI	RGATCY	5 cut(s)	25, 190, 1222, 1570, 1939
Bsu15I	ATCGAT	1 cut(s)	1995
BsuI	GTATCC	1 cut(s)	1828
BsuRI	GGCC	4 cut(s)	445, 627, 912, 2056
BsuTUI	ATCGAT	1 cut(s)	1995
BtgZI	GCGATG	1 cut(s)	1095
BtsCI	GGATG	5 cut(s)	587, 790, 1009, 1553, 2015
BtsI	GCAGTG	1 cut(s)	1554
BtsIMutI	CAGTG	4 cut(s)	584, 1357, 1554, 1579
Cac8I	GCNNGC	5 cut(s)	130, 697, 1528, 1703, 1927
CciI	TCATGA	2 cut(s)	790, 798
CfoI	GCGC	2 cut(s)	179, 1133
Cfr13I	GGNCC	5 cut(s)	162, 625, 1473, 1810, 2054
ClaI	ATCGAT	1 cut(s)	1995
CseI	GACGC	4 cut(s)	93, 134, 1103, 1670
CsiI	ACCWGGT	1 cut(s)	87
Csp6I	GTAC	5 cut(s)	112, 936, 1257, 1363, 1409
CviAII	CATG	8 cut(s)	5, 184, 791, 799, 1058, 1237, 1464, 1896
CviQI	GTAC	5 cut(s)	112, 936, 1257, 1363, 1409
DdeI	CTNAG	4 cut(s)	348, 924, 1469, 1665
DpnI	GATC	9 cut(s)	27, 159, 192, 1032, 1224, 1572, 1698, 1941, 1998
DpnII	GATC	9 cut(s)	25, 157, 190, 1030, 1222, 1570, 1696, 1939, 1996
DraI	TTTAAA	1 cut(s)	376
DraIII	CACNNNGTG	1 cut(s)	91
EaeI	YGGCCR	1 cut(s)	910
Eam1104I	CTCTTC	2 cut(s)	1398, 1951
EarI	CTCTTC	2 cut(s)	1398, 1951
Eco130I	CCWWGG	1 cut(s)	1341
Eco147I	AGGCCT	1 cut(s)	445
Eco32I	GATATC	1 cut(s)	1993
Eco47I	GGWCC	3 cut(s)	162, 1473, 1810
Eco57I	CTGAAG	1 cut(s)	1935
Eco88I	CYCGRG	1 cut(s)	2064
EcoO109I	RGGNCCY	2 cut(s)	1473, 1810
EcoRI	GAATTC	3 cut(s)	214, 340, 2095
EcoRII	CCWGG	6 cut(s)	87, 172, 224, 406, 514, 1416
EcoRV	GATATC	1 cut(s)	1993
EcoT14I	CCWWGG	1 cut(s)	1341
EcoT22I	ATGCAT	2 cut(s)	6, 644
ErhI	CCWWGG	1 cut(s)	1341
FaeI	CATG	8 cut(s)	8, 187, 794, 802, 1061, 1240, 1467, 1899
FalI	AAGNNNNNCTT	4 cut(s)	453, 485, 1395, 1427
FaqI	GGGAC	1 cut(s)	521
FatI	CATG	8 cut(s)	4, 183, 790, 798, 1057, 1236, 1463, 1895
FauI	CCCGC	2 cut(s)	4, 1240
FblI	GTMKAC	1 cut(s)	123
Fnu4HI	GCNGC	5 cut(s)	83, 241, 1616, 1650, 1930
FokI	GGATG	5 cut(s)	574, 797, 1016, 1560, 2002
Fsp4HI	GCNGC	5 cut(s)	83, 241, 1616, 1650, 1930
FspBI	CTAG	5 cut(s)	441, 696, 738, 1028, 1676
GlaI	GCGC	2 cut(s)	178, 1132
GluI	GCNGC	5 cut(s)	83, 241, 1616, 1650, 1930
GsuI	CTGGAG	4 cut(s)	411, 1842, 1848, 2070
HaeIII	GGCC	4 cut(s)	445, 627, 912, 2056
HapII	CCGG	2 cut(s)	1211, 2044
HgaI	GACGC	4 cut(s)	93, 134, 1103, 1670
HhaI	GCGC	2 cut(s)	179, 1133
Hin1I	GRCGYC	2 cut(s)	104, 126
Hin1II	CATG	8 cut(s)	8, 187, 794, 802, 1061, 1240, 1467, 1899
Hin6I	GCGC	2 cut(s)	177, 1131
HinP1I	GCGC	2 cut(s)	177, 1131
HincII	GTYRAC	1 cut(s)	124
HindII	GTYRAC	1 cut(s)	124
HpaII	CCGG	2 cut(s)	1211, 2044
Hpy166II	GTNNAC	3 cut(s)	124, 671, 1175
Hpy8I	GTNNAC	3 cut(s)	124, 671, 1175
Hpy99I	CGWCG	3 cut(s)	109, 128, 1376
HpyAV	CCTTC	3 cut(s)	82, 616, 1930
HpyCH4IV	ACGT	2 cut(s)	646, 887
HpyF10VI	GCNNNNNNNGC	3 cut(s)	240, 1086, 1565
HpyF3I	CTNAG	4 cut(s)	348, 924, 1469, 1665
HpySE526I	ACGT	2 cut(s)	646, 887
Hsp92I	GRCGYC	2 cut(s)	104, 126
Hsp92II	CATG	8 cut(s)	8, 187, 794, 802, 1061, 1240, 1467, 1899
HspAI	GCGC	2 cut(s)	177, 1131
Kpn2I	TCCGGA	1 cut(s)	1210
KpnI	GGTACC	1 cut(s)	1260
Kzo9I	GATC	9 cut(s)	25, 157, 190, 1030, 1222, 1570, 1696, 1939, 1996
LmnI	GCTCC	4 cut(s)	1138, 1421, 1867, 2046
Lsp1109I	GCAGC	5 cut(s)	69, 227, 1602, 1636, 1916
LweI	GCATC	4 cut(s)	444, 775, 994, 1469
MabI	ACCWGGT	1 cut(s)	87
MaeI	CTAG	5 cut(s)	441, 696, 738, 1028, 1676
MaeII	ACGT	2 cut(s)	646, 887
MaeIII	GTNAC	5 cut(s)	146, 1201, 1384, 1636, 1889
MalI	GATC	9 cut(s)	27, 159, 192, 1032, 1224, 1572, 1698, 1941, 1998
MboI	GATC	9 cut(s)	25, 157, 190, 1030, 1222, 1570, 1696, 1939, 1996
MboII	GAAGA	8 cut(s)	106, 494, 662, 677, 1415, 1501, 1938, 1941
MfeI	CAATTG	2 cut(s)	502, 1149
MflI	RGATCY	5 cut(s)	25, 190, 1222, 1570, 1939
MhlI	GDGCHC	1 cut(s)	236
MlsI	TGGCCA	1 cut(s)	912
MluNI	TGGCCA	1 cut(s)	912
MlyI	GAGTC	5 cut(s)	528, 1571, 1886, 2015, 2056
MmeI	TCCRAC	1 cut(s)	1806
Mox20I	TGGCCA	1 cut(s)	912
Mph1103I	ATGCAT	2 cut(s)	6, 644
MroI	TCCGGA	1 cut(s)	1210
MroXI	GAANNNNTTC	2 cut(s)	35, 400
MscI	TGGCCA	1 cut(s)	912
MseI	TTAA	9 cut(s)	375, 539, 890, 983, 1125, 1191, 1227, 1707, 1761
MslI	CAYNNNNRTG	1 cut(s)	1002
Msp20I	TGGCCA	1 cut(s)	912
MspI	CCGG	2 cut(s)	1211, 2044
MspR9I	CCNGG	6 cut(s)	89, 174, 226, 408, 516, 1418
MunI	CAATTG	2 cut(s)	502, 1149
Mva1269I	GAATGC	3 cut(s)	314, 644, 1312
MvaI	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
MvnI	CGCG	3 cut(s)	11, 179, 1131
MwoI	GCNNNNNNNGC	3 cut(s)	240, 1086, 1565
NdeII	GATC	9 cut(s)	25, 157, 190, 1030, 1222, 1570, 1696, 1939, 1996
NheI	GCTAGC	1 cut(s)	695
NlaIII	CATG	8 cut(s)	8, 187, 794, 802, 1061, 1240, 1467, 1899
NlaIV	GGNNCC	7 cut(s)	38, 164, 192, 223, 1258, 1475, 1812
NmeAIII	GCCGAG	1 cut(s)	1585
NmuCI	GTSAC	2 cut(s)	146, 1889
NsiI	ATGCAT	2 cut(s)	6, 644
NspI	RCATGY	1 cut(s)	8
PaeR7I	CTCGAG	1 cut(s)	2064
PagI	TCATGA	2 cut(s)	790, 798
PasI	CCCWGGG	1 cut(s)	1417
PceI	AGGCCT	1 cut(s)	445
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PctI	GAATGC	3 cut(s)	314, 644, 1312
PdmI	GAANNNNTTC	2 cut(s)	35, 400
PfeI	GAWTC	7 cut(s)	435, 466, 1368, 1624, 1643, 1850, 2121
PflFI	GACNNNGTC	1 cut(s)	1097
PflMI	CCANNNNNTGG	3 cut(s)	173, 752, 1987
PfoI	TCCNGGA	1 cut(s)	224
PkrI	GCNGC	5 cut(s)	84, 242, 1617, 1651, 1931
PleI	GAGTC	5 cut(s)	528, 1570, 1886, 2014, 2056
PpsI	GAGTC	5 cut(s)	528, 1570, 1886, 2014, 2056
Ppu21I	YACGTR	1 cut(s)	647
PpuMI	RGGWCCY	2 cut(s)	1473, 1810
PshAI	GACNNNNGTC	1 cut(s)	1896
PsiI	TTATAA	1 cut(s)	65
Psp1406I	AACGTT	1 cut(s)	887
Psp5II	RGGWCCY	2 cut(s)	1473, 1810
Psp6I	CCWGG	6 cut(s)	87, 172, 224, 406, 514, 1416
PspGI	CCWGG	6 cut(s)	87, 172, 224, 406, 514, 1416
PspN4I	GGNNCC	7 cut(s)	38, 164, 192, 223, 1258, 1475, 1812
PspPI	GGNCC	5 cut(s)	162, 625, 1473, 1810, 2054
PspPPI	RGGWCCY	2 cut(s)	1473, 1810
PspXI	VCTCGAGB	1 cut(s)	2064
PstI	CTGCAG	2 cut(s)	1570, 2026
PsuI	RGATCY	5 cut(s)	25, 190, 1222, 1570, 1939
PsyI	GACNNNGTC	1 cut(s)	1097
RsaI	GTAC	5 cut(s)	113, 937, 1258, 1364, 1410
RsaNI	GTAC	5 cut(s)	112, 936, 1257, 1363, 1409
RseI	CAYNNNNRTG	1 cut(s)	1002
SalI	GTCGAC	1 cut(s)	122
SaqAI	TTAA	9 cut(s)	375, 539, 890, 983, 1125, 1191, 1227, 1707, 1761
SatI	GCNGC	5 cut(s)	83, 241, 1616, 1650, 1930
Sau3AI	GATC	9 cut(s)	25, 157, 190, 1030, 1222, 1570, 1696, 1939, 1996
Sau96I	GGNCC	5 cut(s)	162, 625, 1473, 1810, 2054
ScaI	AGTACT	1 cut(s)	113
SchI	GAGTC	5 cut(s)	528, 1571, 1886, 2015, 2056
ScrFI	CCNGG	6 cut(s)	89, 174, 226, 408, 516, 1418
SduI	GDGCHC	1 cut(s)	236
SexAI	ACCWGGT	1 cut(s)	87
SfaNI	GCATC	4 cut(s)	444, 775, 994, 1469
SfcI	CTRYAG	4 cut(s)	575, 917, 1566, 2022
Sfr274I	CTCGAG	1 cut(s)	2064
SinI	GGWCC	3 cut(s)	162, 1473, 1810
SlaI	CTCGAG	1 cut(s)	2064
SmiMI	CAYNNNNRTG	1 cut(s)	1002
SmlI	CTYRAG	2 cut(s)	876, 2064
SmoI	CTYRAG	2 cut(s)	876, 2064
SseBI	AGGCCT	1 cut(s)	445
SsiI	CCGC	6 cut(s)	11, 531, 599, 1247, 1715, 1757
SspI	AATATT	3 cut(s)	751, 1141, 1264
SspMI	CTAG	5 cut(s)	441, 696, 738, 1028, 1676
StuI	AGGCCT	1 cut(s)	445
StyD4I	CCNGG	6 cut(s)	87, 172, 224, 406, 514, 1416
StyI	CCWWGG	1 cut(s)	1341
TaiI	ACGT	2 cut(s)	649, 890
TaqI	TCGA	9 cut(s)	107, 123, 135, 595, 675, 1371, 1479, 1995, 2065
TatI	WGTACW	2 cut(s)	111, 935
TfiI	GAWTC	7 cut(s)	435, 466, 1368, 1624, 1643, 1850, 2121
Tru1I	TTAA	9 cut(s)	375, 539, 890, 983, 1125, 1191, 1227, 1707, 1761
Tru9I	TTAA	9 cut(s)	375, 539, 890, 983, 1125, 1191, 1227, 1707, 1761
TscAI	CASTG	4 cut(s)	584, 1357, 1561, 1586
TseFI	GTSAC	2 cut(s)	146, 1889
TseI	GCWGC	5 cut(s)	82, 240, 1615, 1649, 1929
Tsp45I	GTSAC	2 cut(s)	146, 1889
TspGWI	ACGGA	1 cut(s)	2133
TspRI	CASTG	4 cut(s)	584, 1357, 1561, 1586
Tth111I	GACNNNGTC	1 cut(s)	1097
Van91I	CCANNNNNTGG	3 cut(s)	173, 752, 1987
VpaK11BI	GGWCC	3 cut(s)	162, 1473, 1810
XapI	RAATTY	7 cut(s)	214, 340, 485, 993, 1396, 2037, 2095
XbaI	TCTAGA	2 cut(s)	737, 1027
XceI	RCATGY	1 cut(s)	8
XhoI	CTCGAG	1 cut(s)	2064
XmiI	GTMKAC	1 cut(s)	123
XmnI	GAANNNNTTC	2 cut(s)	35, 400
XspI	CTAG	5 cut(s)	441, 696, 738, 1028, 1676
ZrmI	AGTACT	1 cut(s)	113
Zsp2I	ATGCAT	2 cut(s)	6, 644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.