Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007668

Physical Location & Seq

Genomic Coordinates Forward (+)

3209217 .. 3214459

Gene Structure 5243 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1046600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGCATGTCGCGGGAGTGAGCTTGGATCTGAATTGGTTCCTGCACTTCATATTTACGGTGTTTATAATCGCCTTCTGTTTGCTGCACCTGGTGAAGAACACGGCCTCGAAGTACTTTGAGGTCGACGCCAGCTTCGAGGGAGGAGGTGACGGTGGTGATCGGACCCCAATTCCTGGCGCGCTCATGGAGGATCCGGTTTGTGTCGTCTGTGGGAATTCGGGTTCCAGGAGGTGCTCTCGCTGCAAGGCCGTTAGATACTGCTCATCGAAATGCCAAGAAAAGCATTGGAAGTCAGGGCATAAGACTGAATGCAAGGACTTTCAACCATCTGGCAGAGTGAATTCAGCTCAGAACACATTGACTAATCGGAGATTTAAAACTTCTGGTGTTGGGGGCAAAACATTCCCTGGACTTGCTCTTGTTCCTGCTCATGGAATTTCTAAGCGTATCAAGAAGCCGAAAGAGATTCTTTTTCCCTACGATGAATTTGTTGAACTTTTCAATTGGGACAAGCCAGGGTTTCCTCCTTGTGGACTCTTAAATTGTGGAAACAGTTGCTTTGCCAATGTGGTTCTACAGTGTCTTTCATCCACTCGACCGCTTGTTGCCTACTTGTTAGAGAAGGGCCATCAGAGAGAGTGCATACGTGAAGACTGGTGCTTCCTTTGTGAATTCCAAATCCATCTTCAAAGAGCAAGCCAAAGTTCGCAGTCCTTTTCACCAACCAACATTATCTCTAGATTACCAAATATTGGTGGTAATCTTGGCTATGGGAGGCAGGAGGATGCTCATGAACTCATGAGGTTTGCCATTGATACAATGCAGTCTGTCTGTCTTGACGAGTTTGGTGGAGAGAAAGCTGTGACTCCAAGCTCTCAAGAGACAACGTTAATTCAACATATATTTGGTGGCCAGCTACAATCTCAGGTGATTTGTACAAAATGCGAGAATATATCAAATCAATACGAAAATATGATGGATTTAACTGTTGAGATTCATGGGGATGCTTCATCATTGGAGGAGTGTCTTGATCAATTCACCATCAAGGAGTGGCTTCATGGCGATAATATGTATAAATGCGATGGGTGCAATGACTATGTCAAGGCTTGGAAACGTCTTACTGTTAAACGGGCTCCAAACATACTCACAATTGCCTTGAAGAGATTTCAGAGTGGGCGGTTTGGGAAAATTAACAAGAGAGTAACATTTCCTGAAACATTAGATCTTAACCCCTACATGAGTGAAGTGGGAGACGGTACAAATATCTATAAGCTTTATGCCGTTGTGGTCCATATCGATATGCTAAATGCTTCATATTTTGGACACTATATCTGTTATACCAAGGATTTCAGCGGAAACTGGTACAAAATCGACGACTGTAAGGTTGGGACTGTAAATTTGGAAGAGGTACTTTCCCAGGGAGCATATATGCTATTATATAGCAGGGTGCAGCCACGAGCATCATGCCTAAGGACCGAACCTCCAAAGAAAAAGGAGGAAATGATGAATGGTGAAGTAGAGCCTTGCCAAAAGAAACAACATAAATGTTCCGTCGCTGAGTCTGCAGATCCTACACACAATTCTGGGTCTGTGCCATCTGACACAAGTTTGCCACCACAGATTCCAAGCTGTGTAACAGACTCGGCTGCTGTAATCAATGGTGAGGTTACAATTGAACATTCTGATAGTGCGGATCTCAAGCTTAAATTACTTCCAACTGTTTCAAAAGAGGTTTGCATGGTTGAAAATGGTACTGTTAATTCCCCATCTAGTCCATCTGTTTCAAGGGAGATTTCTATCTGCGAGAAGGACCCTGCTGGTGAATTGGATTTGGATACTGTAAGAGGTGATTCAACTCCAGCTCCAGCTGGTATCGATTTGTCTAATGGTGAGTCATGTTGGCCTGTTCTGGACGATGTATCAGCGCGCTGCGTGAAGGATCTCTCTTCTTCAGGTCGTGAAGCTGAAAATGGCGATTCCCAAGATATGGATATCGGTCATTGTGAGTCAAGTTCATCCCCTGCAGAGGACATTGAAATTTACCGGAGCAATGGGCCGACGACTCATGCAAATGGAACTGATTACCCGGTTGTGAATTCTGGTATTCTGAATGGGAACGGAATCCACATAATAGAAGTAGATGACGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

717

Amino Acids

78.93

Weight (kDa)

5.47

Isoelectric Point (pI)

52.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	67 - 104	8.8e-11	MYND finger
UCH	PF00443	177 - 480	3.4e-54	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	178 - 462	3e-20	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007668)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24640 AT2G24640 AT4G31670
fragaria_vesca	FvH4_2g37100
malus_domestica	MD08G1047300.v1.1 MD15G1046600.v1.1
prunus_persica	Prupe.1G401000_v2.0.a1 Prupe.1G401000_v2.0.a1
pyrus_communis	pycom08g03970 pycom15g04430
rosa_chinensis	RchiOBHm_Chr6g0304691
rosa_multiflora	Rmu_sc0003341.1_g000007
rosa_roxburghii	Rroxscaffold_7G00163590
rosa_rugosa	Rorug06G0333000 Rorug06G0333100 Rorug06G0333200 Rorug06G0333300 Rorug06G0333400 Rorug06G0333500
rosa_samantha	Rh6AG445600 Rh6BG456300 Rh6CG458500 Rh6DG445700
rosa_wichuraiana	Rw6G038750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	65
AccB7I	CCANNNNNTGG	3 cut(s)	173, 752, 1987
AccI	GTMKAC	1 cut(s)	123
AccII	CGCG	3 cut(s)	11, 179, 1927
AciI	CCGC	5 cut(s)	11, 599, 1177, 1353, 1691
AclI	AACGTT	1 cut(s)	887
AclWI	GGATC	6 cut(s)	33, 185, 198, 1562, 1701, 1947
AcoI	YGGCCR	1 cut(s)	910
AcsI	RAATTY	8 cut(s)	214, 340, 435, 485, 671, 1396, 2037, 2095
AcuI	CTGAAG	1 cut(s)	1935
AcyI	GRCGYC	1 cut(s)	126
AdeI	CACNNNGTG	1 cut(s)	91
AfaI	GTAC	6 cut(s)	113, 937, 1258, 1364, 1410, 1753
AfiI	CCNNNNNNNGG	6 cut(s)	173, 431, 530, 752, 1987, 2026
AjnI	CCWGG	6 cut(s)	87, 172, 224, 406, 514, 1416
AjuI	GAANNNNNNNTTGG	2 cut(s)	669, 701
AloI	GAACNNNNNNTCC	2 cut(s)	205, 237
Alw21I	GWGCWC	1 cut(s)	236
Alw26I	GTCTC	2 cut(s)	875, 1245
AlwI	GGATC	6 cut(s)	33, 185, 198, 1562, 1701, 1947
AoxI	GGCC	6 cut(s)	102, 246, 625, 910, 1901, 2054
ApeKI	GCWGC	5 cut(s)	82, 240, 1450, 1646, 1929
ApoI	RAATTY	8 cut(s)	214, 340, 435, 485, 671, 1396, 2037, 2095
ArsI	GACNNNNNNTTYG	4 cut(s)	116, 148, 1381, 1413
Asp700I	GAANNNNTTC	1 cut(s)	35
AspLEI	GCGC	4 cut(s)	179, 181, 1927, 1929
AspS9I	GGNCC	6 cut(s)	162, 625, 1288, 1473, 1810, 2054
AsuC2I	CCSGG	1 cut(s)	2087
AvaII	GGWCC	4 cut(s)	162, 1288, 1473, 1810
AxyI	CCTNAGG	1 cut(s)	1469
BalI	TGGCCA	1 cut(s)	912
BamHI	GGATCC	1 cut(s)	190
BanII	GRGCYC	1 cut(s)	1135
BauI	CACGAG	1 cut(s)	1455
BbsI	GAAGAC	1 cut(s)	657
Bbv12I	GWGCWC	1 cut(s)	236
BbvI	GCAGC	5 cut(s)	69, 227, 1462, 1633, 1916
BccI	CCATC	9 cut(s)	334, 636, 690, 970, 1049, 1076, 1603, 1774, 1783
BceAI	ACGGC	3 cut(s)	117, 233, 1265
BcgI	CGANNNNNNTGC	2 cut(s)	1446, 1480
BciT130I	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
BciVI	GTATCC	1 cut(s)	1828
BclI	TGATCA	1 cut(s)	1030
BcnI	CCSGG	1 cut(s)	2087
BcoDI	GTCTC	2 cut(s)	875, 1245
BfaI	CTAG	2 cut(s)	738, 1770
BfmI	CTRYAG	3 cut(s)	575, 1563, 2022
BfuI	GTATCC	1 cut(s)	1828
BglII	AGATCT	1 cut(s)	1222
BisI	GCNGC	5 cut(s)	83, 241, 1451, 1647, 1930
BlsI	GCNGC	5 cut(s)	84, 242, 1452, 1648, 1931
BmcAI	AGTACT	1 cut(s)	113
Bme1390I	CCNGG	7 cut(s)	89, 174, 226, 408, 516, 1418, 2087
Bme18I	GGWCC	4 cut(s)	162, 1288, 1473, 1810
BmgT120I	GGNCC	6 cut(s)	162, 625, 1288, 1473, 1810, 2054
BmiI	GGNNCC	6 cut(s)	38, 164, 192, 223, 1134, 1812
BmrFI	CCNGG	7 cut(s)	89, 174, 226, 408, 516, 1418, 2087
BmsI	GCATC	3 cut(s)	775, 994, 1469
BpiI	GAAGAC	1 cut(s)	657
BplI	GAGNNNNNCTC	2 cut(s)	220, 252
BpmI	CTGGAG	2 cut(s)	1842, 1848
BpuEI	CTTGAG	2 cut(s)	861, 1682
BpuMI	CCSGG	1 cut(s)	2087
Bsa29I	ATCGAT	2 cut(s)	1296, 1875
BsaAI	YACGTR	1 cut(s)	647
BsaBI	GATNNNNATC	1 cut(s)	1796
BsaHI	GRCGYC	1 cut(s)	126
BsaJI	CCNNGG	5 cut(s)	406, 515, 1341, 1416, 1417
BsaWI	WCCGGW	2 cut(s)	193, 2043
BsaXI	ACNNNNNCTCC	4 cut(s)	1465, 1495, 1846, 1876
Bsc4I	CCNNNNNNNGG	6 cut(s)	173, 431, 530, 752, 1987, 2026
Bse1I	ACTGG	2 cut(s)	659, 1364
Bse21I	CCTNAGG	1 cut(s)	1469
Bse3DI	GCAATG	2 cut(s)	1096, 2056
Bse8I	GATNNNNATC	1 cut(s)	1796
BseBI	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
BseCI	ATCGAT	2 cut(s)	1296, 1875
BseDI	CCNNGG	5 cut(s)	406, 515, 1341, 1416, 1417
BseGI	GGATG	4 cut(s)	587, 790, 1009, 2015
BseJI	GATNNNNATC	1 cut(s)	1796
BseLI	CCNNNNNNNGG	6 cut(s)	173, 431, 530, 752, 1987, 2026
BseMI	GCAATG	2 cut(s)	1096, 2056
BseMII	CTCAG	3 cut(s)	362, 938, 1548
BseNI	ACTGG	2 cut(s)	659, 1364
BsePI	GCGCGC	2 cut(s)	177, 1925
BseRI	GAGGAG	2 cut(s)	156, 1034
BseXI	GCAGC	5 cut(s)	69, 227, 1462, 1633, 1916
BsgI	GTGCAG	3 cut(s)	26, 68, 1469
Bsh1236I	CGCG	3 cut(s)	11, 179, 1927
Bsh1285I	CGRYCG	1 cut(s)	599
BshFI	GGCC	6 cut(s)	104, 248, 627, 912, 1903, 2056
BshVI	ATCGAT	2 cut(s)	1296, 1875
BsiEI	CGRYCG	1 cut(s)	599
BsiHKAI	GWGCWC	1 cut(s)	236
BsiSI	CCGG	3 cut(s)	194, 2044, 2087
BslFI	GGGAC	2 cut(s)	521, 1402
BslI	CCNNNNNNNGG	6 cut(s)	173, 431, 530, 752, 1987, 2026
BsmAI	GTCTC	2 cut(s)	875, 1245
BsmBI	CGTCTC	1 cut(s)	1245
BsmFI	GGGAC	2 cut(s)	521, 1402
BsmI	GAATGC	1 cut(s)	314
BsnI	GGCC	6 cut(s)	104, 248, 627, 912, 1903, 2056
Bsp1286I	GDGCHC	2 cut(s)	236, 1135
Bsp1407I	TGTACA	1 cut(s)	935
Bsp143I	GATC	8 cut(s)	25, 157, 190, 1030, 1222, 1567, 1693, 1939
BspACI	CCGC	5 cut(s)	11, 599, 1177, 1353, 1691
BspANI	GGCC	6 cut(s)	104, 248, 627, 912, 1903, 2056
BspCNI	CTCAG	3 cut(s)	361, 937, 1549
BspDI	ATCGAT	2 cut(s)	1296, 1875
BspFNI	CGCG	3 cut(s)	11, 179, 1927
BspHI	TCATGA	2 cut(s)	790, 798
BspLI	GGNNCC	6 cut(s)	38, 164, 192, 223, 1134, 1812
BspMAI	CTGCAG	2 cut(s)	1567, 2026
BspPI	GGATC	6 cut(s)	33, 185, 198, 1562, 1701, 1947
BsrDI	GCAATG	2 cut(s)	1096, 2056
BsrGI	TGTACA	1 cut(s)	935
BsrI	ACTGG	2 cut(s)	659, 1364
BssECI	CCNNGG	5 cut(s)	406, 515, 1341, 1416, 1417
BssHII	GCGCGC	2 cut(s)	177, 1925
BssMI	GATC	8 cut(s)	25, 157, 190, 1030, 1222, 1567, 1693, 1939
BssNI	GRCGYC	1 cut(s)	126
BssSI	CACGAG	1 cut(s)	1455
BssT1I	CCWWGG	1 cut(s)	1341
Bst2BI	CACGAG	1 cut(s)	1455
Bst2UI	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
Bst6I	CTCTTC	3 cut(s)	1154, 1398, 1951
BstACI	GRCGYC	1 cut(s)	126
BstAUI	TGTACA	1 cut(s)	935
BstBAI	YACGTR	1 cut(s)	647
BstC8I	GCNNGC	5 cut(s)	130, 179, 697, 914, 1927
BstDEI	CTNAG	5 cut(s)	348, 441, 924, 1469, 1557
BstF5I	GGATG	4 cut(s)	587, 790, 1009, 2015
BstFNI	CGCG	3 cut(s)	11, 179, 1927
BstHHI	GCGC	4 cut(s)	179, 181, 1927, 1929
BstKTI	GATC	8 cut(s)	28, 160, 193, 1033, 1225, 1570, 1696, 1942
BstMAI	GTCTC	2 cut(s)	875, 1245
BstMBI	GATC	8 cut(s)	25, 157, 190, 1030, 1222, 1567, 1693, 1939
BstMCI	CGRYCG	1 cut(s)	599
BstMWI	GCNNNNNNNGC	3 cut(s)	240, 1086, 1562
BstNI	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
BstNSI	RCATGY	1 cut(s)	8
BstSCI	CCNGG	7 cut(s)	87, 172, 224, 406, 514, 1416, 2085
BstSFI	CTRYAG	3 cut(s)	575, 1563, 2022
BstUI	CGCG	3 cut(s)	11, 179, 1927
BstV1I	GCAGC	5 cut(s)	69, 227, 1462, 1633, 1916
BstV2I	GAAGAC	1 cut(s)	657
BstX2I	RGATCY	6 cut(s)	25, 190, 1222, 1567, 1693, 1939
BstYI	RGATCY	6 cut(s)	25, 190, 1222, 1567, 1693, 1939
Bsu15I	ATCGAT	2 cut(s)	1296, 1875
Bsu36I	CCTNAGG	1 cut(s)	1469
BsuI	GTATCC	1 cut(s)	1828
BsuRI	GGCC	6 cut(s)	104, 248, 627, 912, 1903, 2056
BsuTUI	ATCGAT	2 cut(s)	1296, 1875
BtgZI	GCGATG	1 cut(s)	1095
BtsCI	GGATG	4 cut(s)	587, 790, 1009, 2015
BtsIMutI	CAGTG	1 cut(s)	584
Cac8I	GCNNGC	5 cut(s)	130, 179, 697, 914, 1927
CciI	TCATGA	2 cut(s)	790, 798
CfoI	GCGC	4 cut(s)	179, 181, 1927, 1929
Cfr13I	GGNCC	6 cut(s)	162, 625, 1288, 1473, 1810, 2054
ClaI	ATCGAT	2 cut(s)	1296, 1875
CseI	GACGC	1 cut(s)	134
CsiI	ACCWGGT	1 cut(s)	87
Csp6I	GTAC	6 cut(s)	112, 936, 1257, 1363, 1409, 1752
CviQI	GTAC	6 cut(s)	112, 936, 1257, 1363, 1409, 1752
DdeI	CTNAG	5 cut(s)	348, 441, 924, 1469, 1557
DpnI	GATC	8 cut(s)	27, 159, 192, 1032, 1224, 1569, 1695, 1941
DpnII	GATC	8 cut(s)	25, 157, 190, 1030, 1222, 1567, 1693, 1939
DraI	TTTAAA	1 cut(s)	376
DraIII	CACNNNGTG	1 cut(s)	91
EaeI	YGGCCR	1 cut(s)	910
Eam1104I	CTCTTC	3 cut(s)	1154, 1398, 1951
EarI	CTCTTC	3 cut(s)	1154, 1398, 1951
Eco130I	CCWWGG	1 cut(s)	1341
Eco24I	GRGCYC	1 cut(s)	1135
Eco32I	GATATC	1 cut(s)	1993
Eco47I	GGWCC	4 cut(s)	162, 1288, 1473, 1810
Eco57I	CTGAAG	1 cut(s)	1935
Eco81I	CCTNAGG	1 cut(s)	1469
EcoO109I	RGGNCCY	1 cut(s)	1810
EcoRI	GAATTC	4 cut(s)	214, 340, 671, 2095
EcoRII	CCWGG	6 cut(s)	87, 172, 224, 406, 514, 1416
EcoRV	GATATC	1 cut(s)	1993
EcoT14I	CCWWGG	1 cut(s)	1341
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	1135
ErhI	CCWWGG	1 cut(s)	1341
Esp3I	CGTCTC	1 cut(s)	1245
FalI	AAGNNNNNCTT	4 cut(s)	453, 485, 1395, 1427
FaqI	GGGAC	2 cut(s)	521, 1402
FauI	CCCGC	1 cut(s)	4
FbaI	TGATCA	1 cut(s)	1030
FblI	GTMKAC	1 cut(s)	123
Fnu4HI	GCNGC	5 cut(s)	83, 241, 1451, 1647, 1930
FokI	GGATG	4 cut(s)	574, 797, 1016, 2002
FriOI	GRGCYC	1 cut(s)	1135
Fsp4HI	GCNGC	5 cut(s)	83, 241, 1451, 1647, 1930
FspBI	CTAG	2 cut(s)	738, 1770
GlaI	GCGC	4 cut(s)	178, 180, 1926, 1928
GluI	GCNGC	5 cut(s)	83, 241, 1451, 1647, 1930
GsuI	CTGGAG	2 cut(s)	1842, 1848
HaeIII	GGCC	6 cut(s)	104, 248, 627, 912, 1903, 2056
HapII	CCGG	3 cut(s)	194, 2044, 2087
HgaI	GACGC	1 cut(s)	134
HhaI	GCGC	4 cut(s)	179, 181, 1927, 1929
Hin1I	GRCGYC	1 cut(s)	126
Hin6I	GCGC	4 cut(s)	177, 179, 1925, 1927
HinP1I	GCGC	4 cut(s)	177, 179, 1925, 1927
HincII	GTYRAC	1 cut(s)	124
HindII	GTYRAC	1 cut(s)	124
HindIII	AAGCTT	2 cut(s)	1271, 1700
HpaII	CCGG	3 cut(s)	194, 2044, 2087
Hpy166II	GTNNAC	2 cut(s)	124, 533
Hpy188I	TCNGA	9 cut(s)	30, 162, 351, 369, 633, 1170, 1600, 1684, 2109
Hpy8I	GTNNAC	2 cut(s)	124, 533
Hpy99I	CGWCG	4 cut(s)	128, 1376, 1556, 2062
HpyAV	CCTTC	4 cut(s)	82, 616, 1801, 1930
HpyCH4IV	ACGT	3 cut(s)	646, 887, 1114
HpyF10VI	GCNNNNNNNGC	3 cut(s)	240, 1086, 1562
HpyF3I	CTNAG	5 cut(s)	348, 441, 924, 1469, 1557
HpySE526I	ACGT	3 cut(s)	646, 887, 1114
Hsp92I	GRCGYC	1 cut(s)	126
HspAI	GCGC	4 cut(s)	177, 179, 1925, 1927
Ksp22I	TGATCA	1 cut(s)	1030
Kzo9I	GATC	8 cut(s)	25, 157, 190, 1030, 1222, 1567, 1693, 1939
LmnI	GCTCC	4 cut(s)	1138, 1421, 1867, 2046
Lsp1109I	GCAGC	5 cut(s)	69, 227, 1462, 1633, 1916
LweI	GCATC	3 cut(s)	775, 994, 1469
MabI	ACCWGGT	1 cut(s)	87
MaeI	CTAG	2 cut(s)	738, 1770
MaeII	ACGT	3 cut(s)	646, 887, 1114
MaeIII	GTNAC	5 cut(s)	146, 862, 1201, 1633, 1666
MalI	GATC	8 cut(s)	27, 159, 192, 1032, 1224, 1569, 1695, 1941
MboI	GATC	8 cut(s)	25, 157, 190, 1030, 1222, 1567, 1693, 1939
MboII	GAAGA	7 cut(s)	106, 662, 677, 1171, 1415, 1938, 1941
MfeI	CAATTG	3 cut(s)	502, 1149, 1671
MflI	RGATCY	6 cut(s)	25, 190, 1222, 1567, 1693, 1939
MhlI	GDGCHC	2 cut(s)	236, 1135
MlsI	TGGCCA	1 cut(s)	912
MluNI	TGGCCA	1 cut(s)	912
MlyI	GAGTC	7 cut(s)	528, 859, 1568, 1634, 1901, 2015, 2056
MmeI	TCCRAC	1 cut(s)	1739
Mox20I	TGGCCA	1 cut(s)	912
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	35
MscI	TGGCCA	1 cut(s)	912
MseI	TTAA	9 cut(s)	375, 539, 890, 983, 1125, 1191, 1227, 1704, 1758
MslI	CAYNNNNRTG	3 cut(s)	268, 1002, 2070
Msp20I	TGGCCA	1 cut(s)	912
MspA1I	CMGCKG	2 cut(s)	1353, 1868
MspI	CCGG	3 cut(s)	194, 2044, 2087
MspR9I	CCNGG	7 cut(s)	89, 174, 226, 408, 516, 1418, 2087
MunI	CAATTG	3 cut(s)	502, 1149, 1671
Mva1269I	GAATGC	1 cut(s)	314
MvaI	CCWGG	6 cut(s)	89, 174, 226, 408, 516, 1418
MvnI	CGCG	3 cut(s)	11, 179, 1927
MwoI	GCNNNNNNNGC	3 cut(s)	240, 1086, 1562
NciI	CCSGG	1 cut(s)	2087
NdeII	GATC	8 cut(s)	25, 157, 190, 1030, 1222, 1567, 1693, 1939
NlaIV	GGNNCC	6 cut(s)	38, 164, 192, 223, 1134, 1812
NmeAIII	GCCGAG	1 cut(s)	1622
NmuCI	GTSAC	2 cut(s)	146, 862
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	8
PagI	TCATGA	2 cut(s)	790, 798
PasI	CCCWGGG	1 cut(s)	1417
PauI	GCGCGC	2 cut(s)	177, 1925
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PctI	GAATGC	1 cut(s)	314
PdmI	GAANNNNTTC	1 cut(s)	35
PfeI	GAWTC	6 cut(s)	466, 994, 1621, 1850, 1976, 2121
PflFI	GACNNNGTC	1 cut(s)	1097
PflMI	CCANNNNNTGG	3 cut(s)	173, 752, 1987
PfoI	TCCNGGA	1 cut(s)	224
PkrI	GCNGC	5 cut(s)	84, 242, 1452, 1648, 1931
PleI	GAGTC	7 cut(s)	528, 859, 1567, 1634, 1900, 2014, 2056
PpsI	GAGTC	7 cut(s)	528, 859, 1567, 1634, 1900, 2014, 2056
Ppu21I	YACGTR	1 cut(s)	647
PpuMI	RGGWCCY	1 cut(s)	1810
PsiI	TTATAA	1 cut(s)	65
Psp1406I	AACGTT	1 cut(s)	887
Psp5II	RGGWCCY	1 cut(s)	1810
Psp6I	CCWGG	6 cut(s)	87, 172, 224, 406, 514, 1416
PspGI	CCWGG	6 cut(s)	87, 172, 224, 406, 514, 1416
PspN4I	GGNNCC	6 cut(s)	38, 164, 192, 223, 1134, 1812
PspPI	GGNCC	6 cut(s)	162, 625, 1288, 1473, 1810, 2054
PspPPI	RGGWCCY	1 cut(s)	1810
PstI	CTGCAG	2 cut(s)	1567, 2026
PsuI	RGATCY	6 cut(s)	25, 190, 1222, 1567, 1693, 1939
PsyI	GACNNNGTC	1 cut(s)	1097
PteI	GCGCGC	2 cut(s)	177, 1925
PvuII	CAGCTG	1 cut(s)	1868
RsaI	GTAC	6 cut(s)	113, 937, 1258, 1364, 1410, 1753
RsaNI	GTAC	6 cut(s)	112, 936, 1257, 1363, 1409, 1752
RseI	CAYNNNNRTG	3 cut(s)	268, 1002, 2070
SalI	GTCGAC	1 cut(s)	122
SaqAI	TTAA	9 cut(s)	375, 539, 890, 983, 1125, 1191, 1227, 1704, 1758
SatI	GCNGC	5 cut(s)	83, 241, 1451, 1647, 1930
Sau3AI	GATC	8 cut(s)	25, 157, 190, 1030, 1222, 1567, 1693, 1939
Sau96I	GGNCC	6 cut(s)	162, 625, 1288, 1473, 1810, 2054
ScaI	AGTACT	1 cut(s)	113
SchI	GAGTC	7 cut(s)	528, 859, 1568, 1634, 1901, 2015, 2056
ScrFI	CCNGG	7 cut(s)	89, 174, 226, 408, 516, 1418, 2087
SduI	GDGCHC	2 cut(s)	236, 1135
SexAI	ACCWGGT	1 cut(s)	87
SfaNI	GCATC	3 cut(s)	775, 994, 1469
SfcI	CTRYAG	3 cut(s)	575, 1563, 2022
SinI	GGWCC	4 cut(s)	162, 1288, 1473, 1810
SmiMI	CAYNNNNRTG	3 cut(s)	268, 1002, 2070
SmlI	CTYRAG	2 cut(s)	876, 1697
SmoI	CTYRAG	2 cut(s)	876, 1697
SsiI	CCGC	5 cut(s)	11, 599, 1177, 1353, 1691
SspI	AATATT	1 cut(s)	751
SspMI	CTAG	2 cut(s)	738, 1770
StyD4I	CCNGG	7 cut(s)	87, 172, 224, 406, 514, 1416, 2085
StyI	CCWWGG	1 cut(s)	1341
TaiI	ACGT	3 cut(s)	649, 890, 1117
TaqI	TCGA	8 cut(s)	107, 123, 135, 266, 595, 1296, 1371, 1875
TaqII	GACCGA	2 cut(s)	1490, 1985
TatI	WGTACW	2 cut(s)	111, 935
TfiI	GAWTC	6 cut(s)	466, 994, 1621, 1850, 1976, 2121
Tru1I	TTAA	9 cut(s)	375, 539, 890, 983, 1125, 1191, 1227, 1704, 1758
Tru9I	TTAA	9 cut(s)	375, 539, 890, 983, 1125, 1191, 1227, 1704, 1758
TscAI	CASTG	1 cut(s)	584
TseFI	GTSAC	2 cut(s)	146, 862
TseI	GCWGC	5 cut(s)	82, 240, 1450, 1646, 1929
Tsp45I	GTSAC	2 cut(s)	146, 862
TspGWI	ACGGA	2 cut(s)	1540, 2133
TspRI	CASTG	1 cut(s)	584
Tth111I	GACNNNGTC	1 cut(s)	1097
Van91I	CCANNNNNTGG	3 cut(s)	173, 752, 1987
VpaK11BI	GGWCC	4 cut(s)	162, 1288, 1473, 1810
XapI	RAATTY	8 cut(s)	214, 340, 435, 485, 671, 1396, 2037, 2095
XbaI	TCTAGA	1 cut(s)	737
XceI	RCATGY	1 cut(s)	8
XmiI	GTMKAC	1 cut(s)	123
XmnI	GAANNNNTTC	1 cut(s)	35
XspI	CTAG	2 cut(s)	738, 1770
ZrmI	AGTACT	1 cut(s)	113
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.