MD08G1060300.v1.1

Aspartate aminotransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
4787065 .. 4791371
4307 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1060300.v1.1.491

Sequence Viewer

Length: 1395 bp
ATGGCTTCAGCGATGCTGTCCTTAGCTTCCGTCTCGCCGTCGGCTTCTCTGTCCCATCACGAGACTCCCAAGGGGAAGTTGAAGCTTGGGAGTACTTCTTGGAGCTTGAACAAGGAAAGAAACTGTCTATTTGCGAAGACAGAGTCTTTTGGTAGGGTATCTATGGTAGCTGCCGTGAATGTCTCTAAATTCGAGGGTGTAACGATGGCCCCACCTGATCCAATTCTCGGAGTGTCTGAAGCATTCAAAGCTAGCACAAACGAGTCAAAGCTCAACCTTGGAGTTGGGGCATATCGAACGGAAGATCTTCAGCCATACGTGCTTGATGTTGTTAAGAAGGCAGAGAATCTTATGATTGAGAGGGGGGAAAACAAAGAGTACCTCCCAATAGAAGGTTTGGCAGCGTTCAACAAAGTGACTGCAGAGTTATTATTTGGAGCAGACAACCCAGTAATAAAGCAACAGAGACTAGCAACTGTCCAAGGTCTATCAGGAACTGGTTCTCTTCGCCTTGCTGGGGCTTTTATCGAACGATATTTTCCAGGGGCAAAAGTTTTAATATCATCTCCAACCTGGGGTAATCACAAAAACATTTTTAACGACTCTAGAGTTCCATGGTCAGAGTACCGATACTATGATCCAAAAACAGTTGGTTTGGATTTCGAGGGGATGATAGCAGACATAAAGGCAGCACCTGAAGGATCTTTTGTGTTGCTTCATGGCTGTGCTCACAACCCTACCGGCATAGATCCAACCCCCGAACAGTGGGAAAAAATTGCTGATGTCATTCAAGAAAAAAACCATATCCCCTTTTTTGATGTTGCATACCAGGGATTTGCTAGTGGAAGCTTGGATACTGATGCAGCATCTGTCAGATTGTTTGCTGCACGTGGTCTAGAGCTTCTGGTTGCTCAGTCATACAGTAAAAACCTTGGGCTCTATGCAGAAAGAATTGGAGCAATCAATGTTGTCTGCGCATCATCTGATGCAGCAACAAGGGTAAAGAGCCAATTGAAGAGGATCGCTCGACCTATGTACTCAAATCCTCCAATCCACGGTGCTAGAATTGTGGCCAATGTAGTTGGAGATCCAGCACTCTTCAACGAGTGGAAAGCAGAGATGGAGATGATGGCTGGAAGGATAAAGGGCGTGAGACAAAAACTATACGATAACCTGACTGCAACAGATAAGAGTGGAAAGGATTGGTCATTTATACTTAAGCAGATCGGCATGTTTTCATTCACCGGCTTAAACAAAGCTCAGACCGAAAACATGACAAACAAGTGGCATGTATACATGACAAAGGACGGGAGGATTTCCCTGGCAGGATTATCTTTGGCGAAATGTGAATACCTCTCGGATGCCATCATTGATTCGTACCACAATGTTAGTTGA

Protein Analysis

465

Amino Acids

50.76

Weight (kDa)

8.43

Isoelectric Point (pI)

32.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 89 - 456 3.3e-96 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 976
AccI GTMKAC 1 cut(s) 1293
AclWI GGATC 6 cut(s) 212, 632, 709, 743, 1028, 1082
AcoI YGGCCR 1 cut(s) 1071
AcsI RAATTY 1 cut(s) 188
AcuI CTGAAG 3 cut(s) 258, 293, 717
AcvI CACGTG 1 cut(s) 890
AfaI GTAC 5 cut(s) 94, 380, 626, 1037, 1379
AfiI CCNNNNNNNGG 6 cut(s) 227, 392, 517, 575, 765, 1055
AflII CTTAAG 1 cut(s) 1217
AgsI TTSAA 7 cut(s) 82, 109, 247, 409, 791, 1015, 1102
AjnI CCWGG 4 cut(s) 541, 572, 828, 1320
AluBI AGCT 9 cut(s) 26, 85, 105, 170, 251, 271, 849, 901, 1259
AluI AGCT 9 cut(s) 26, 85, 105, 170, 251, 271, 849, 901, 1259
Alw21I GWGCWC 1 cut(s) 730
Alw26I GTCTC 5 cut(s) 37, 56, 187, 460, 1147
AlwI GGATC 6 cut(s) 212, 632, 709, 743, 1028, 1082
AlwNI CAGNNNCTG 3 cut(s) 497, 695, 869
AoxI GGCC 2 cut(s) 207, 1071
ApeKI GCWGC 6 cut(s) 170, 401, 689, 863, 884, 989
ApoI RAATTY 1 cut(s) 188
ArsI GACNNNNNNTTYG 2 cut(s) 128, 160
Asp700I GAANNNNTTC 2 cut(s) 306, 499
AspLEI GCGC 1 cut(s) 977
AspS9I GGNCC 1 cut(s) 208
AsuHPI GGTGA 1 cut(s) 1234
AsuNHI GCTAGC 1 cut(s) 251
BalI TGGCCA 1 cut(s) 1073
BanII GRGCYC 1 cut(s) 939
BarI GAAGNNNNNNTAC 2 cut(s) 838, 870
BauI CACGAG 1 cut(s) 59
BbrPI CACGTG 1 cut(s) 890
BbsI GAAGAC 1 cut(s) 143
Bbv12I GWGCWC 1 cut(s) 730
BbvI GCAGC 6 cut(s) 157, 413, 701, 871, 875, 1001
BccI CCATC 5 cut(s) 63, 199, 1114, 1123, 1373
BceAI ACGGC 2 cut(s) 22, 158
BciT130I CCWGG 4 cut(s) 543, 574, 830, 1322
BciVI GTATCC 1 cut(s) 847
BcoDI GTCTC 5 cut(s) 37, 56, 187, 460, 1147
BfaI CTAG 6 cut(s) 252, 470, 606, 840, 896, 1062
BfmI CTRYAG 1 cut(s) 420
BfrI CTTAAG 1 cut(s) 1217
BfuI GTATCC 1 cut(s) 847
BglII AGATCT 1 cut(s) 304
BisI GCNGC 6 cut(s) 171, 402, 690, 864, 885, 990
BlsI GCNGC 6 cut(s) 172, 403, 691, 865, 886, 991
BmcAI AGTACT 1 cut(s) 94
Bme1390I CCNGG 4 cut(s) 543, 574, 830, 1322
BmgT120I GGNCC 1 cut(s) 208
BmiI GGNNCC 1 cut(s) 210
BmrFI CCNGG 4 cut(s) 543, 574, 830, 1322
BmrI ACTGGG 1 cut(s) 443
BmsI GCATC 6 cut(s) 3, 850, 875, 976, 986, 1351
BmtI GCTAGC 1 cut(s) 255
BmuI ACTGGG 1 cut(s) 443
BpiI GAAGAC 1 cut(s) 143
BplI GAGNNNNNCTC 2 cut(s) 1009, 1041
Bpu10I CCTNAGC 1 cut(s) 22
BsaAI YACGTR 2 cut(s) 319, 890
Bsc4I CCNNNNNNNGG 6 cut(s) 227, 392, 517, 575, 765, 1055
Bse118I RCCGGY 2 cut(s) 740, 1244
Bse1I ACTGG 2 cut(s) 449, 502
BseBI CCWGG 4 cut(s) 543, 574, 830, 1322
BseGI GGATG 2 cut(s) 675, 1366
BseLI CCNNNNNNNGG 6 cut(s) 227, 392, 517, 575, 765, 1055
BseMII CTCAG 2 cut(s) 926, 1274
BseNI ACTGG 2 cut(s) 449, 502
BseXI GCAGC 6 cut(s) 157, 413, 701, 871, 875, 1001
BseYI CCCAGC 1 cut(s) 515
BsgI GTGCAG 1 cut(s) 870
BshFI GGCC 2 cut(s) 209, 1073
BsiHKAI GWGCWC 1 cut(s) 730
BsiSI CCGG 2 cut(s) 741, 1245
BslFI GGGAC 1 cut(s) 37
BslI CCNNNNNNNGG 6 cut(s) 227, 392, 517, 575, 765, 1055
BsmAI GTCTC 5 cut(s) 37, 56, 187, 460, 1147
BsmBI CGTCTC 1 cut(s) 37
BsmFI GGGAC 1 cut(s) 37
BsmI GAATGC 1 cut(s) 242
BsnI GGCC 2 cut(s) 209, 1073
Bsp1286I GDGCHC 2 cut(s) 730, 939
Bsp143I GATC 8 cut(s) 217, 304, 637, 701, 748, 1020, 1087, 1224
Bsp19I CCATGG 1 cut(s) 614
BspANI GGCC 2 cut(s) 209, 1073
BspCNI CTCAG 2 cut(s) 925, 1273
BspLI GGNNCC 1 cut(s) 210
BspMAI CTGCAG 1 cut(s) 424
BspOI GCTAGC 1 cut(s) 255
BspPI GGATC 6 cut(s) 212, 632, 709, 743, 1028, 1082
BspTI CTTAAG 1 cut(s) 1217
BsrFI RCCGGY 2 cut(s) 740, 1244
BsrI ACTGG 2 cut(s) 449, 502
BssAI RCCGGY 2 cut(s) 740, 1244
BssMI GATC 8 cut(s) 217, 304, 637, 701, 748, 1020, 1087, 1224
BssNAI GTATAC 1 cut(s) 1294
BssSI CACGAG 1 cut(s) 59
BssT1I CCWWGG 5 cut(s) 69, 277, 481, 614, 931
Bst1107I GTATAC 1 cut(s) 1294
Bst2BI CACGAG 1 cut(s) 59
Bst2UI CCWGG 4 cut(s) 543, 574, 830, 1322
Bst4CI ACNGT 6 cut(s) 125, 478, 649, 765, 923, 1058
Bst6I CTCTTC 3 cut(s) 510, 1010, 1103
BstAFI CTTAAG 1 cut(s) 1217
BstBAI YACGTR 2 cut(s) 319, 890
BstC8I GCNNGC 1 cut(s) 253
BstDEI CTNAG 3 cut(s) 22, 912, 1260
BstDSI CCRYGG 2 cut(s) 614, 1054
BstF5I GGATG 2 cut(s) 675, 1366
BstHHI GCGC 1 cut(s) 977
BstKTI GATC 8 cut(s) 220, 307, 640, 704, 751, 1023, 1090, 1227
BstMAI GTCTC 5 cut(s) 37, 56, 187, 460, 1147
BstMBI GATC 8 cut(s) 217, 304, 637, 701, 748, 1020, 1087, 1224
BstMWI GCNNNNNNNGC 2 cut(s) 248, 319
BstNI CCWGG 4 cut(s) 543, 574, 830, 1322
BstNSI RCATGY 2 cut(s) 1234, 1292
BstSCI CCNGG 4 cut(s) 541, 572, 828, 1320
BstSFI CTRYAG 1 cut(s) 420
BstV1I GCAGC 6 cut(s) 157, 413, 701, 871, 875, 1001
BstV2I GAAGAC 1 cut(s) 143
BstX2I RGATCY 4 cut(s) 304, 701, 748, 1087
BstYI RGATCY 4 cut(s) 304, 701, 748, 1087
BstZ17I GTATAC 1 cut(s) 1294
BsuI GTATCC 1 cut(s) 847
BsuRI GGCC 2 cut(s) 209, 1073
BtgI CCRYGG 2 cut(s) 614, 1054
BtgZI GCGATG 1 cut(s) 26
BtsCI GGATG 2 cut(s) 675, 1366
BtsIMutI CAGTG 1 cut(s) 770
Cac8I GCNNGC 1 cut(s) 253
CaiI CAGNNNCTG 3 cut(s) 497, 695, 869
CfoI GCGC 1 cut(s) 977
Cfr10I RCCGGY 2 cut(s) 740, 1244
Cfr13I GGNCC 1 cut(s) 208
Csp6I GTAC 5 cut(s) 93, 379, 625, 1036, 1378
CviAII CATG 6 cut(s) 615, 719, 1231, 1273, 1289, 1297
CviQI GTAC 5 cut(s) 93, 379, 625, 1036, 1378
DdeI CTNAG 3 cut(s) 22, 912, 1260
DpnI GATC 8 cut(s) 219, 306, 639, 703, 750, 1022, 1089, 1226
DpnII GATC 8 cut(s) 217, 304, 637, 701, 748, 1020, 1087, 1224
EaeI YGGCCR 1 cut(s) 1071
Eam1104I CTCTTC 3 cut(s) 510, 1010, 1103
EarI CTCTTC 3 cut(s) 510, 1010, 1103
Eco130I CCWWGG 5 cut(s) 69, 277, 481, 614, 931
Eco24I GRGCYC 1 cut(s) 939
Eco57I CTGAAG 3 cut(s) 258, 293, 717
Eco72I CACGTG 1 cut(s) 890
EcoRII CCWGG 4 cut(s) 541, 572, 828, 1320
EcoT14I CCWWGG 5 cut(s) 69, 277, 481, 614, 931
EcoT38I GRGCYC 1 cut(s) 939
ErhI CCWWGG 5 cut(s) 69, 277, 481, 614, 931
Esp3I CGTCTC 1 cut(s) 37
FaeI CATG 6 cut(s) 618, 722, 1234, 1276, 1292, 1300
FaqI GGGAC 1 cut(s) 37
FatI CATG 6 cut(s) 614, 718, 1230, 1272, 1288, 1296
FblI GTMKAC 1 cut(s) 1293
Fnu4HI GCNGC 6 cut(s) 171, 402, 690, 864, 885, 990
FokI GGATG 2 cut(s) 682, 1373
FriOI GRGCYC 1 cut(s) 939
Fsp4HI GCNGC 6 cut(s) 171, 402, 690, 864, 885, 990
FspBI CTAG 6 cut(s) 252, 470, 606, 840, 896, 1062
FspI TGCGCA 1 cut(s) 976
GlaI GCGC 1 cut(s) 976
GluI GCNGC 6 cut(s) 171, 402, 690, 864, 885, 990
GsaI CCCAGC 1 cut(s) 519
HaeIII GGCC 2 cut(s) 209, 1073
HapII CCGG 2 cut(s) 741, 1245
HhaI GCGC 1 cut(s) 977
Hin1II CATG 6 cut(s) 618, 722, 1234, 1276, 1292, 1300
Hin6I GCGC 1 cut(s) 975
HinP1I GCGC 1 cut(s) 975
HindIII AAGCTT 2 cut(s) 83, 847
HinfI GANTC 6 cut(s) 64, 143, 263, 346, 602, 1373
HpaII CCGG 2 cut(s) 741, 1245
HphI GGTGA 1 cut(s) 1234
Hpy166II GTNNAC 1 cut(s) 1294
Hpy188I TCNGA 7 cut(s) 230, 238, 622, 875, 985, 1263, 1360
Hpy188III TCNNGA 5 cut(s) 59, 492, 606, 791, 896
Hpy8I GTNNAC 1 cut(s) 1294
Hpy99I CGWCG 1 cut(s) 43
HpyAV CCTTC 4 cut(s) 331, 386, 692, 1131
HpyCH4III ACNGT 6 cut(s) 125, 478, 649, 765, 923, 1058
HpyCH4IV ACGT 2 cut(s) 318, 889
HpyCH4V TGCA 7 cut(s) 422, 824, 863, 887, 944, 989, 1181
HpyF10VI GCNNNNNNNGC 2 cut(s) 248, 319
HpyF3I CTNAG 3 cut(s) 22, 912, 1260
HpySE526I ACGT 2 cut(s) 318, 889
Hsp92II CATG 6 cut(s) 618, 722, 1234, 1276, 1292, 1300
HspAI GCGC 1 cut(s) 975
Kzo9I GATC 8 cut(s) 217, 304, 637, 701, 748, 1020, 1087, 1224
LmnI GCTCC 3 cut(s) 102, 437, 956
Lsp1109I GCAGC 6 cut(s) 157, 413, 701, 871, 875, 1001
LweI GCATC 6 cut(s) 3, 850, 875, 976, 986, 1351
MaeI CTAG 6 cut(s) 252, 470, 606, 840, 896, 1062
MaeII ACGT 2 cut(s) 318, 889
MaeIII GTNAC 2 cut(s) 199, 415
MalI GATC 8 cut(s) 219, 306, 639, 703, 750, 1022, 1089, 1226
MboI GATC 8 cut(s) 217, 304, 637, 701, 748, 1020, 1087, 1224
MboII GAAGA 6 cut(s) 148, 299, 314, 497, 1027, 1090
MfeI CAATTG 1 cut(s) 1010
MflI RGATCY 4 cut(s) 304, 701, 748, 1087
MhlI GDGCHC 2 cut(s) 730, 939
MlsI TGGCCA 1 cut(s) 1073
MluCI AATT 6 cut(s) 188, 222, 774, 951, 1010, 1065
MluNI TGGCCA 1 cut(s) 1073
MlyI GAGTC 4 cut(s) 58, 152, 272, 596
MmeI TCCRAC 3 cut(s) 593, 776, 1063
MnlI CCTC 8 cut(s) 187, 354, 392, 658, 1011, 1056, 1305, 1364
Mox20I TGGCCA 1 cut(s) 1073
MroXI GAANNNNTTC 2 cut(s) 306, 499
MscI TGGCCA 1 cut(s) 1073
MseI TTAA 5 cut(s) 333, 557, 597, 1218, 1250
MslI CAYNNNNRTG 1 cut(s) 723
Msp20I TGGCCA 1 cut(s) 1073
MspCI CTTAAG 1 cut(s) 1217
MspI CCGG 2 cut(s) 741, 1245
MspR9I CCNGG 4 cut(s) 543, 574, 830, 1322
MunI CAATTG 1 cut(s) 1010
Mva1269I GAATGC 1 cut(s) 242
MvaI CCWGG 4 cut(s) 543, 574, 830, 1322
MwoI GCNNNNNNNGC 2 cut(s) 248, 319
NcoI CCATGG 1 cut(s) 614
NdeII GATC 8 cut(s) 217, 304, 637, 701, 748, 1020, 1087, 1224
NheI GCTAGC 1 cut(s) 251
NlaIII CATG 6 cut(s) 618, 722, 1234, 1276, 1292, 1300
NlaIV GGNNCC 1 cut(s) 210
NmuCI GTSAC 1 cut(s) 415
NsbI TGCGCA 1 cut(s) 976
NspI RCATGY 2 cut(s) 1234, 1292
PctI GAATGC 1 cut(s) 242
PdmI GAANNNNTTC 2 cut(s) 306, 499
PfeI GAWTC 2 cut(s) 346, 1373
PflFI GACNNNGTC 1 cut(s) 142
PkrI GCNGC 6 cut(s) 172, 403, 691, 865, 886, 991
PleI GAGTC 4 cut(s) 58, 151, 271, 596
PmaCI CACGTG 1 cut(s) 890
PmlI CACGTG 1 cut(s) 890
PpsI GAGTC 4 cut(s) 58, 151, 271, 596
Ppu21I YACGTR 2 cut(s) 319, 890
Psp6I CCWGG 4 cut(s) 541, 572, 828, 1320
PspCI CACGTG 1 cut(s) 890
PspFI CCCAGC 1 cut(s) 515
PspGI CCWGG 4 cut(s) 541, 572, 828, 1320
PspN4I GGNNCC 1 cut(s) 210
PspPI GGNCC 1 cut(s) 208
PstI CTGCAG 1 cut(s) 424
PstNI CAGNNNCTG 3 cut(s) 497, 695, 869
PsuI RGATCY 4 cut(s) 304, 701, 748, 1087
PsyI GACNNNGTC 1 cut(s) 142
RsaI GTAC 5 cut(s) 94, 380, 626, 1037, 1379
RsaNI GTAC 5 cut(s) 93, 379, 625, 1036, 1378
RseI CAYNNNNRTG 1 cut(s) 723
SaqAI TTAA 5 cut(s) 333, 557, 597, 1218, 1250
SatI GCNGC 6 cut(s) 171, 402, 690, 864, 885, 990
Sau3AI GATC 8 cut(s) 217, 304, 637, 701, 748, 1020, 1087, 1224
Sau96I GGNCC 1 cut(s) 208
ScaI AGTACT 1 cut(s) 94
SchI GAGTC 4 cut(s) 58, 152, 272, 596
ScrFI CCNGG 4 cut(s) 543, 574, 830, 1322
SduI GDGCHC 2 cut(s) 730, 939
SfaNI GCATC 6 cut(s) 3, 850, 875, 976, 986, 1351
SfcI CTRYAG 1 cut(s) 420
SmiMI CAYNNNNRTG 1 cut(s) 723
SmlI CTYRAG 1 cut(s) 1217
SmoI CTYRAG 1 cut(s) 1217
Sse9I AATT 6 cut(s) 188, 222, 774, 951, 1010, 1065
SspMI CTAG 6 cut(s) 252, 470, 606, 840, 896, 1062
StyD4I CCNGG 4 cut(s) 541, 572, 828, 1320
StyI CCWWGG 5 cut(s) 69, 277, 481, 614, 931
TaaI ACNGT 6 cut(s) 125, 478, 649, 765, 923, 1058
TaiI ACGT 2 cut(s) 321, 892
TaqI TCGA 5 cut(s) 192, 295, 528, 663, 1027
TaqII GACCGA 1 cut(s) 1280
TasI AATT 6 cut(s) 188, 222, 774, 951, 1010, 1065
TatI WGTACW 2 cut(s) 92, 1035
TfiI GAWTC 2 cut(s) 346, 1373
Tru1I TTAA 5 cut(s) 333, 557, 597, 1218, 1250
Tru9I TTAA 5 cut(s) 333, 557, 597, 1218, 1250
TscAI CASTG 1 cut(s) 770
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 6 cut(s) 170, 401, 689, 863, 884, 989
Tsp45I GTSAC 1 cut(s) 415
TspDTI ATGAA 2 cut(s) 707, 1227
TspGWI ACGGA 2 cut(s) 19, 314
TspRI CASTG 1 cut(s) 770
Tth111I GACNNNGTC 1 cut(s) 142
Vha464I CTTAAG 1 cut(s) 1217
XapI RAATTY 1 cut(s) 188
XbaI TCTAGA 2 cut(s) 605, 895
XceI RCATGY 2 cut(s) 1234, 1292
XmiI GTMKAC 1 cut(s) 1293
XmnI GAANNNNTTC 2 cut(s) 306, 499
XspI CTAG 6 cut(s) 252, 470, 606, 840, 896, 1062
ZrmI AGTACT 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.