MD08G1093600.v1.1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0012273
Physical Location & Seq
Forward (+)
7777025 .. 7778771
1747 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1093600.v1.1.491

Sequence Viewer

Length: 1596 bp
ATGGGCCAGTCAGCTTCGGCGGCCGCCAATTCAAGCCGCCGTGAGAGCAACAACCGCATCCATCGATCCAAGTCCAAAGCAACGGCCGCGATCTCCCCGATGCTGCAGGCCGACGAGGAAGGCTTTGAGATCGTCGACTGTGCCACCGATTTCATCTCCGATCTTCCCGACGAGTGCTTGGCCTGCATATTCTACTCCCTCGGCTCCGGCGACCGGAAACGATGCTCTCTGGTCTGCCGACGGTGGTTGAGGATCGAGGGACAGAGCCGGCACCGTCTCTCCCTCCACGCACAATCGGATCTCCTCCCTATCATCCCTTCCCTCTTCTCCCGCTTCGACGCCGTCACCAAACTCGCCCTCAAATGCGACCGTAGATGCGTGAGCGTCGGCGACGAGGCGCTTGTCCTCATTTCTCTGCGATGCCGCAACCTCACGCGCCTAAAGCTCCGCGCGTGCCGCGAGTTGACAGACGCCGGGATGATGTCGTTCGCCAAAAACTGCAAAGGGTTGAAGAAGCTGTCGTGCGGGTCGTGCACGTTCGGAGCCAAAGGAATGAACGCCGTACTCGACAATTGCTCGGCTCTGGAAGAGTTATCGGTGAAGCGGCTTCGCGGCATCACCGATGGATCCGCGGCGGAGCCGATCGGGCCCGGTGTGGCTGCCGCGTCGCTCAAAACGATTTGCCTCAAAGAGCTCTACAATGGACAGTGCTTTGGTCCTCTGATAATCGGCGCGAAGAAACTGAGGACTCTGAAGCTCTTCAGGTGCTCCGGCGATTGGGACAAGCTCCTCCAAGTGATATCTGAGCGAGTGACCTCCATGGTTGAGATCCATCTCGAAAAGCTTCAGGTTAGCGACGTTGGCCTCACCGCCATCTCCAATTGCTTGGATCTGGAGATTCTGCACCTGGTCAAGACCCCTGAGTGCACCAATGTAGGATTGGTTTCCGTCGCCGAACGCTGCAAGCTGCTAAGGAAGCTTCACATTGACGGATGGAAGGCTAATCGAGTAGGCGACGAGGGTTTGGTCTCGGTAGCAAAGAATTGTGCTAACCTTCAGGAATTGGTGCTCATTGGTGTTAATCCAACAAAAGTGAGCTTGGAGGCATTAGCTTCGAATTGCCCCAATCTCGAAAGATTGGCATTGTGCGGAAGCGATACCGTGGGCGATGTCGAGATTTCGTGCATTGCTGTGAAATGCGTGGCGTTGAAGAAGCTCTGCATTAAGGGCTGTCCCGTCTCGGACATCGGCCTCGAAGCATTGGCCAGTGGTTGCCCTAACATGGTGAAAGTGAAACTCAAGAAATGCAGAGGAGTAACAGCAGAGGGAGCTGATTGGTTGAGGGCGAGCAGGCCTTTATTGGCCGTGAATTTGGATACAGGTGAAACGATCCAAGAGGCCGCCATTGATACCTCCGTTGCGGCCCACGATAATTCCGTCGAGTTCCCGCCGTTGGCCATCCAACCGGCGTTTCCGGACATTGCCTCAAGCAGTGCTGGGCGGCCGACCTTTAAGTCAAGGTTAGGGCTTTTGACGGGGAGGGGTTTTGTGGCTTGCACTCTGAGAAGGTGGGCGTCGAATCGGAATAATAGTTAA

Protein Analysis

532

Amino Acids

57.21

Weight (kDa)

8.88

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 52 - 85 6.9e-07 F-box domain
F-box-like PF12937 52 - 85 8.9e-07 F-box-like
DUF7885 PF25372 283 - 446 1.1e-11 Leucine Rich Repeat Domain of unknown function (DUF7885)
LRR_At5g56370 PF24758 298 - 405 9.6e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47056 AT4G07400
fragaria_vesca FvH4_2g33740
malus_domestica MD08G1093600.v1.1 MD15G1077300.v1.1
prunus_persica Prupe.1G430700_v2.0.a1
pyrus_communis pycom08g07610 pycom12g16540 pycom15g07200
rosa_chinensis RchiOBHm_Chr6g0308811
rosa_laevigata RLG00000010616
rosa_multiflora Rmu_sc0004046.1_g000006
rosa_roxburghii Rroxscaffold_7G00159900
rosa_rugosa Rorug06G0368300
rosa_samantha Rh6AG479700 Rh6BG489300 Rh6CG494800 Rh6DG480000
rosa_wichuraiana Rw6G041820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1513
AccB1I GGYRCC 1 cut(s) 270
AccI GTMKAC 1 cut(s) 135
AccII CGCG 9 cut(s) 89, 436, 450, 452, 459, 612, 632, 665, 734
AccIII TCCGGA 1 cut(s) 1474
AclWI GGATC 8 cut(s) 60, 260, 306, 621, 634, 823, 897, 1384
AcoI YGGCCR 6 cut(s) 21, 84, 1263, 1362, 1455, 1502
AcsI RAATTY 1 cut(s) 1369
AcuI CTGAAG 4 cut(s) 745, 773, 830, 1040
AcyI GRCGYC 3 cut(s) 339, 471, 1574
AfaI GTAC 1 cut(s) 564
AfiI CCNNNNNNNGG 4 cut(s) 213, 777, 1282, 1453
AgsI TTSAA 3 cut(s) 33, 511, 1210
AjnI CCWGG 1 cut(s) 906
AjuI GAANNNNNNNTTGG 2 cut(s) 1455, 1487
Alw21I GWGCWC 5 cut(s) 536, 696, 770, 929, 1071
Alw26I GTCTC 3 cut(s) 281, 1033, 1243
Alw44I GTGCAC 2 cut(s) 532, 925
AlwI GGATC 8 cut(s) 60, 260, 306, 621, 634, 823, 897, 1384
Aor13HI TCCGGA 1 cut(s) 1474
ApaI GGGCCC 1 cut(s) 651
ApaLI GTGCAC 2 cut(s) 532, 925
ApeKI GCWGC 4 cut(s) 103, 659, 960, 967
ApoI RAATTY 1 cut(s) 1369
Asp700I GAANNNNTTC 2 cut(s) 758, 843
AspLEI GCGC 4 cut(s) 400, 438, 452, 734
AspS9I GGNCC 5 cut(s) 4, 647, 648, 716, 1423
AsuC2I CCSGG 2 cut(s) 475, 651
AsuHPI GGTGA 6 cut(s) 337, 610, 610, 859, 1297, 1394
AsuII TTCGAA 1 cut(s) 1115
AvaII GGWCC 1 cut(s) 716
BaeGI GKGCMC 3 cut(s) 536, 651, 929
BaeI ACNNNNGTAYC 2 cut(s) 1401, 1434
BalI TGGCCA 2 cut(s) 1265, 1457
BamHI GGATCC 1 cut(s) 626
BanI GGYRCC 1 cut(s) 270
BanII GRGCYC 2 cut(s) 651, 696
Bbv12I GWGCWC 5 cut(s) 536, 696, 770, 929, 1071
BbvI GCAGC 4 cut(s) 90, 646, 947, 954
BccI CCATC 6 cut(s) 69, 617, 840, 881, 987, 1466
BceAI ACGGC 6 cut(s) 24, 99, 326, 545, 1349, 1435
BcgI CGANNNNNNTGC 2 cut(s) 1095, 1129
BciT130I CCWGG 1 cut(s) 908
BciVI GTATCC 1 cut(s) 1369
BcnI CCSGG 2 cut(s) 475, 651
BcoDI GTCTC 3 cut(s) 281, 1033, 1243
BfmI CTRYAG 1 cut(s) 104
BfoI RGCGCY 1 cut(s) 401
BfuI GTATCC 1 cut(s) 1369
BglI GCCNNNNNGGC 1 cut(s) 646
Bme1390I CCNGG 3 cut(s) 475, 651, 908
Bme18I GGWCC 1 cut(s) 716
BmgT120I GGNCC 5 cut(s) 4, 647, 648, 716, 1423
BmiI GGNNCC 6 cut(s) 205, 272, 544, 628, 639, 649
BmrFI CCNGG 3 cut(s) 475, 651, 908
BmsI GCATC 6 cut(s) 66, 90, 212, 365, 410, 624
BpmI CTGGAG 1 cut(s) 914
Bpu10I CCTNAGC 1 cut(s) 971
Bpu14I TTCGAA 1 cut(s) 1115
BpuEI CTTGAG 2 cut(s) 1283, 1471
BpuMI CCSGG 2 cut(s) 475, 651
Bsa29I ATCGAT 1 cut(s) 64
BsaHI GRCGYC 3 cut(s) 339, 471, 1574
BsaI GGTCTC 1 cut(s) 1033
BsaJI CCNNGG 4 cut(s) 199, 630, 819, 1161
BsaWI WCCGGW 2 cut(s) 213, 1474
BsaXI ACNNNNNCTCC 2 cut(s) 263, 293
Bsc4I CCNNNNNNNGG 4 cut(s) 213, 777, 1282, 1453
Bse118I RCCGGY 2 cut(s) 267, 1465
Bse1I ACTGG 2 cut(s) 7, 1266
Bse3DI GCAATG 2 cut(s) 1185, 1479
BseAI TCCGGA 1 cut(s) 1474
BseBI CCWGG 1 cut(s) 908
BseCI ATCGAT 1 cut(s) 64
BseDI CCNNGG 4 cut(s) 199, 630, 819, 1161
BseGI GGATG 5 cut(s) 57, 312, 483, 998, 1458
BseLI CCNNNNNNNGG 4 cut(s) 213, 777, 1282, 1453
BseMI GCAATG 2 cut(s) 1185, 1479
BseMII CTCAG 4 cut(s) 734, 795, 912, 1553
BseNI ACTGG 2 cut(s) 7, 1266
BseRI GAGGAG 3 cut(s) 293, 779, 1326
BseSI GKGCMC 3 cut(s) 536, 651, 929
BseX3I CGGCCG 3 cut(s) 21, 84, 1502
BseXI GCAGC 4 cut(s) 90, 646, 947, 954
BseYI CCCAGC 1 cut(s) 1496
BsgI GTGCAG 1 cut(s) 887
Bsh1236I CGCG 9 cut(s) 89, 436, 450, 452, 459, 612, 632, 665, 734
Bsh1285I CGRYCG 6 cut(s) 24, 87, 214, 370, 645, 1505
BshNI GGYRCC 1 cut(s) 270
BshVI ATCGAT 1 cut(s) 64
BsiEI CGRYCG 6 cut(s) 24, 87, 214, 370, 645, 1505
BsiHKAI GWGCWC 5 cut(s) 536, 696, 770, 929, 1071
BsiSI CCGG 8 cut(s) 207, 214, 268, 474, 651, 771, 1466, 1475
BslFI GGGAC 3 cut(s) 273, 794, 1218
BslI CCNNNNNNNGG 4 cut(s) 213, 777, 1282, 1453
BsmAI GTCTC 3 cut(s) 281, 1033, 1243
BsmBI CGTCTC 2 cut(s) 281, 1243
BsmFI GGGAC 3 cut(s) 273, 794, 1218
Bso31I GGTCTC 1 cut(s) 1033
Bsp119I TTCGAA 1 cut(s) 1115
Bsp120I GGGCCC 1 cut(s) 647
Bsp1286I GDGCHC 6 cut(s) 536, 651, 696, 770, 929, 1071
Bsp13I TCCGGA 1 cut(s) 1474
Bsp19I CCATGG 1 cut(s) 819
BspCNI CTCAG 4 cut(s) 735, 796, 913, 1554
BspDI ATCGAT 1 cut(s) 64
BspEI TCCGGA 1 cut(s) 1474
BspFNI CGCG 9 cut(s) 89, 436, 450, 452, 459, 612, 632, 665, 734
BspLI GGNNCC 6 cut(s) 205, 272, 544, 628, 639, 649
BspMAI CTGCAG 1 cut(s) 108
BspPI GGATC 8 cut(s) 60, 260, 306, 621, 634, 823, 897, 1384
BspQI GCTCTTC 1 cut(s) 764
BspT104I TTCGAA 1 cut(s) 1115
BspT107I GGYRCC 1 cut(s) 270
BspTNI GGTCTC 1 cut(s) 1033
BsrDI GCAATG 2 cut(s) 1185, 1479
BsrFI RCCGGY 2 cut(s) 267, 1465
BsrI ACTGG 2 cut(s) 7, 1266
BssAI RCCGGY 2 cut(s) 267, 1465
BssECI CCNNGG 4 cut(s) 199, 630, 819, 1161
BssNI GRCGYC 3 cut(s) 339, 471, 1574
BssT1I CCWWGG 1 cut(s) 819
Bst2UI CCWGG 1 cut(s) 908
Bst4CI ACNGT 6 cut(s) 140, 243, 275, 371, 708, 1162
Bst6I CTCTTC 3 cut(s) 329, 582, 764
BstACI GRCGYC 3 cut(s) 339, 471, 1574
BstBI TTCGAA 1 cut(s) 1115
BstC8I GCNNGC 8 cut(s) 108, 184, 269, 454, 965, 1348, 1352, 1555
BstDEI CTNAG 5 cut(s) 743, 804, 921, 971, 1562
BstDSI CCRYGG 3 cut(s) 630, 819, 1161
BstF5I GGATG 5 cut(s) 57, 312, 483, 998, 1458
BstFNI CGCG 9 cut(s) 89, 436, 450, 452, 459, 612, 632, 665, 734
BstH2I RGCGCY 1 cut(s) 401
BstHHI GCGC 4 cut(s) 400, 438, 452, 734
BstMAI GTCTC 3 cut(s) 281, 1033, 1243
BstMCI CGRYCG 6 cut(s) 24, 87, 214, 370, 645, 1505
BstNI CCWGG 1 cut(s) 908
BstSCI CCNGG 3 cut(s) 473, 649, 906
BstSFI CTRYAG 1 cut(s) 104
BstSLI GKGCMC 3 cut(s) 536, 651, 929
BstUI CGCG 9 cut(s) 89, 436, 450, 452, 459, 612, 632, 665, 734
BstV1I GCAGC 4 cut(s) 90, 646, 947, 954
BstX2I RGATCY 4 cut(s) 298, 626, 828, 889
BstXI CCANNNNNNTGG 1 cut(s) 886
BstYI RGATCY 4 cut(s) 298, 626, 828, 889
BstZI CGGCCG 3 cut(s) 21, 84, 1502
Bsu15I ATCGAT 1 cut(s) 64
BsuI GTATCC 1 cut(s) 1369
BsuTUI ATCGAT 1 cut(s) 64
BtgI CCRYGG 3 cut(s) 630, 819, 1161
BtgZI GCGATG 2 cut(s) 433, 1182
BtsCI GGATG 5 cut(s) 57, 312, 483, 998, 1458
BtsI GCAGTG 1 cut(s) 1498
BtsIMutI CAGTG 3 cut(s) 713, 1273, 1498
Cac8I GCNNGC 8 cut(s) 108, 184, 269, 454, 965, 1348, 1352, 1555
CciNI GCGGCCGC 1 cut(s) 21
CfoI GCGC 4 cut(s) 400, 438, 452, 734
Cfr10I RCCGGY 2 cut(s) 267, 1465
Cfr13I GGNCC 5 cut(s) 4, 647, 648, 716, 1423
Cfr42I CCGCGG 1 cut(s) 633
ClaI ATCGAT 1 cut(s) 64
CseI GACGC 5 cut(s) 347, 373, 479, 654, 1563
CsiI ACCWGGT 1 cut(s) 906
Csp6I GTAC 1 cut(s) 563
CviAII CATG 2 cut(s) 820, 1282
CviQI GTAC 1 cut(s) 563
DdeI CTNAG 5 cut(s) 743, 804, 921, 971, 1562
DrdI GACNNNNNNGTC 1 cut(s) 1513
DseDI GACNNNNNNGTC 1 cut(s) 1513
EaeI YGGCCR 6 cut(s) 21, 84, 1263, 1362, 1455, 1502
EagI CGGCCG 3 cut(s) 21, 84, 1502
Eam1104I CTCTTC 3 cut(s) 329, 582, 764
EarI CTCTTC 3 cut(s) 329, 582, 764
EciI GGCGGA 1 cut(s) 650
Ecl136II GAGCTC 1 cut(s) 694
EclXI CGGCCG 3 cut(s) 21, 84, 1502
Eco130I CCWWGG 1 cut(s) 819
Eco147I AGGCCT 1 cut(s) 1354
Eco24I GRGCYC 2 cut(s) 651, 696
Eco31I GGTCTC 1 cut(s) 1033
Eco32I GATATC 1 cut(s) 801
Eco47I GGWCC 1 cut(s) 716
Eco52I CGGCCG 3 cut(s) 21, 84, 1502
Eco53kI GAGCTC 1 cut(s) 694
Eco57I CTGAAG 4 cut(s) 745, 773, 830, 1040
EcoICRI GAGCTC 1 cut(s) 694
EcoRII CCWGG 1 cut(s) 906
EcoRV GATATC 1 cut(s) 801
EcoT14I CCWWGG 1 cut(s) 819
EcoT38I GRGCYC 2 cut(s) 651, 696
ErhI CCWWGG 1 cut(s) 819
Esp3I CGTCTC 2 cut(s) 281, 1243
FaeI CATG 2 cut(s) 823, 1285
FaiI YATR 3 cut(s) 188, 821, 1283
FaqI GGGAC 3 cut(s) 273, 794, 1218
FatI CATG 2 cut(s) 819, 1281
FauI CCCGC 3 cut(s) 338, 518, 1455
FblI GTMKAC 1 cut(s) 135
FokI GGATG 5 cut(s) 44, 299, 490, 1005, 1445
FriOI GRGCYC 2 cut(s) 651, 696
GlaI GCGC 4 cut(s) 399, 437, 451, 733
GsaI CCCAGC 1 cut(s) 1500
GsuI CTGGAG 1 cut(s) 914
HaeII RGCGCY 1 cut(s) 401
HapII CCGG 8 cut(s) 207, 214, 268, 474, 651, 771, 1466, 1475
HgaI GACGC 5 cut(s) 347, 373, 479, 654, 1563
HhaI GCGC 4 cut(s) 400, 438, 452, 734
Hin1I GRCGYC 3 cut(s) 339, 471, 1574
Hin1II CATG 2 cut(s) 823, 1285
Hin6I GCGC 4 cut(s) 398, 436, 450, 732
HinP1I GCGC 4 cut(s) 398, 436, 450, 732
HincII GTYRAC 2 cut(s) 136, 465
HindII GTYRAC 2 cut(s) 136, 465
HindIII AAGCTT 2 cut(s) 842, 977
HinfI GANTC 3 cut(s) 748, 898, 1579
HpaII CCGG 8 cut(s) 207, 214, 268, 474, 651, 771, 1466, 1475
HphI GGTGA 6 cut(s) 337, 610, 610, 859, 1297, 1394
Hpy166II GTNNAC 4 cut(s) 136, 465, 534, 927
Hpy188I TCNGA 9 cut(s) 160, 298, 542, 723, 753, 805, 1243, 1563, 1584
Hpy8I GTNNAC 4 cut(s) 136, 465, 534, 927
HpyAV CCTTC 5 cut(s) 113, 327, 991, 1064, 1560
HpyCH4III ACNGT 6 cut(s) 140, 243, 275, 371, 708, 1162
HpyCH4IV ACGT 2 cut(s) 536, 858
HpyF3I CTNAG 5 cut(s) 743, 804, 921, 971, 1562
HpySE526I ACGT 2 cut(s) 536, 858
Hsp92I GRCGYC 3 cut(s) 339, 471, 1574
Hsp92II CATG 2 cut(s) 823, 1285
HspAI GCGC 4 cut(s) 398, 436, 450, 732
Kpn2I TCCGGA 1 cut(s) 1474
KroI GCCGGC 1 cut(s) 267
KroNI GCCGGC 1 cut(s) 269
KspI CCGCGG 1 cut(s) 633
LguI GCTCTTC 1 cut(s) 764
LmnI GCTCC 7 cut(s) 209, 450, 542, 637, 773, 792, 1328
Lsp1109I GCAGC 4 cut(s) 90, 646, 947, 954
LweI GCATC 6 cut(s) 66, 90, 212, 365, 410, 624
MabI ACCWGGT 1 cut(s) 906
MaeII ACGT 2 cut(s) 536, 858
MaeIII GTNAC 3 cut(s) 343, 811, 1315
MboII GAAGA 7 cut(s) 155, 316, 523, 599, 748, 751, 1222
MfeI CAATTG 2 cut(s) 571, 880
MflI RGATCY 4 cut(s) 298, 626, 828, 889
MhlI GDGCHC 6 cut(s) 536, 651, 696, 770, 929, 1071
MlsI TGGCCA 2 cut(s) 1265, 1457
MluCI AATT 8 cut(s) 28, 571, 880, 1042, 1061, 1117, 1369, 1432
MluNI TGGCCA 2 cut(s) 1265, 1457
MlyI GAGTC 1 cut(s) 742
MmeI TCCRAC 2 cut(s) 1109, 1486
Mox20I TGGCCA 2 cut(s) 1265, 1457
MroI TCCGGA 1 cut(s) 1474
MroNI GCCGGC 1 cut(s) 267
MroXI GAANNNNTTC 2 cut(s) 758, 843
MscI TGGCCA 2 cut(s) 1265, 1457
MseI TTAA 4 cut(s) 1080, 1224, 1512, 1594
MslI CAYNNNNRTG 1 cut(s) 1190
Msp20I TGGCCA 2 cut(s) 1265, 1457
MspA1I CMGCKG 1 cut(s) 632
MspI CCGG 8 cut(s) 207, 214, 268, 474, 651, 771, 1466, 1475
MspR9I CCNGG 3 cut(s) 475, 651, 908
MunI CAATTG 2 cut(s) 571, 880
MvaI CCWGG 1 cut(s) 908
MvnI CGCG 9 cut(s) 89, 436, 450, 452, 459, 612, 632, 665, 734
NaeI GCCGGC 1 cut(s) 269
NciI CCSGG 2 cut(s) 475, 651
NcoI CCATGG 1 cut(s) 819
NgoMIV GCCGGC 1 cut(s) 267
NlaIII CATG 2 cut(s) 823, 1285
NlaIV GGNNCC 6 cut(s) 205, 272, 544, 628, 639, 649
NmeAIII GCCGAG 2 cut(s) 180, 557
NmuCI GTSAC 2 cut(s) 343, 811
NotI GCGGCCGC 1 cut(s) 21
NspV TTCGAA 1 cut(s) 1115
PceI AGGCCT 1 cut(s) 1354
PciSI GCTCTTC 1 cut(s) 764
PcsI WCGNNNNNNNCGW 5 cut(s) 207, 527, 564, 674, 1434
PdiI GCCGGC 1 cut(s) 269
PdmI GAANNNNTTC 2 cut(s) 758, 843
PfeI GAWTC 2 cut(s) 898, 1579
PflFI GACNNNGTC 1 cut(s) 341
Ple19I CGATCG 1 cut(s) 645
PleI GAGTC 1 cut(s) 742
PpsI GAGTC 1 cut(s) 742
Psp124BI GAGCTC 1 cut(s) 696
Psp6I CCWGG 1 cut(s) 906
PspFI CCCAGC 1 cut(s) 1496
PspGI CCWGG 1 cut(s) 906
PspN4I GGNNCC 6 cut(s) 205, 272, 544, 628, 639, 649
PspOMI GGGCCC 1 cut(s) 647
PspPI GGNCC 5 cut(s) 4, 647, 648, 716, 1423
PstI CTGCAG 1 cut(s) 108
PsuI RGATCY 4 cut(s) 298, 626, 828, 889
PsyI GACNNNGTC 1 cut(s) 341
PvuI CGATCG 1 cut(s) 645
RsaI GTAC 1 cut(s) 564
RsaNI GTAC 1 cut(s) 563
RseI CAYNNNNRTG 1 cut(s) 1190
SacI GAGCTC 1 cut(s) 696
SacII CCGCGG 1 cut(s) 633
SalI GTCGAC 1 cut(s) 134
SapI GCTCTTC 1 cut(s) 764
SaqAI TTAA 4 cut(s) 1080, 1224, 1512, 1594
Sau96I GGNCC 5 cut(s) 4, 647, 648, 716, 1423
SchI GAGTC 1 cut(s) 742
ScrFI CCNGG 3 cut(s) 475, 651, 908
SduI GDGCHC 6 cut(s) 536, 651, 696, 770, 929, 1071
SexAI ACCWGGT 1 cut(s) 906
SfaNI GCATC 6 cut(s) 66, 90, 212, 365, 410, 624
SfcI CTRYAG 1 cut(s) 104
Sfr303I CCGCGG 1 cut(s) 633
SfuI TTCGAA 1 cut(s) 1115
SgrBI CCGCGG 1 cut(s) 633
SinI GGWCC 1 cut(s) 716
SmiMI CAYNNNNRTG 1 cut(s) 1190
SmlI CTYRAG 2 cut(s) 1298, 1486
SmoI CTYRAG 2 cut(s) 1298, 1486
Sse9I AATT 8 cut(s) 28, 571, 880, 1042, 1061, 1117, 1369, 1432
SseBI AGGCCT 1 cut(s) 1354
SstI GAGCTC 1 cut(s) 696
StuI AGGCCT 1 cut(s) 1354
StyD4I CCNGG 3 cut(s) 473, 649, 906
StyI CCWWGG 1 cut(s) 819
TaaI ACNGT 6 cut(s) 140, 243, 275, 371, 708, 1162
TaiI ACGT 2 cut(s) 539, 861
TasI AATT 8 cut(s) 28, 571, 880, 1042, 1061, 1117, 1369, 1432
TfiI GAWTC 2 cut(s) 898, 1579
Tru1I TTAA 4 cut(s) 1080, 1224, 1512, 1594
Tru9I TTAA 4 cut(s) 1080, 1224, 1512, 1594
TscAI CASTG 3 cut(s) 713, 1273, 1498
TseFI GTSAC 2 cut(s) 343, 811
TseI GCWGC 4 cut(s) 103, 659, 960, 967
Tsp45I GTSAC 2 cut(s) 343, 811
TspDTI ATGAA 2 cut(s) 142, 569
TspGWI ACGGA 4 cut(s) 937, 1005, 1405, 1426
TspRI CASTG 3 cut(s) 713, 1273, 1498
Tth111I GACNNNGTC 1 cut(s) 341
VneI GTGCAC 2 cut(s) 532, 925
VpaK11BI GGWCC 1 cut(s) 716
XapI RAATTY 1 cut(s) 1369
XcmI CCANNNNNNNNNTGG 1 cut(s) 937
XmiI GTMKAC 1 cut(s) 135
XmnI GAANNNNTTC 2 cut(s) 758, 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.