RchiOBHm_Chr6g0308811

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0012273
Physical Location & Seq
Forward (+)
66859903 .. 66862600
2698 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27769

Sequence Viewer

Length: 1590 bp
ATGGGCCAGTCAGCTTCGGCGGCAGCAATTCCAAGCCGCCGTGAAAACAATCACAGACATCGATCTAAGTCCAAAGCAACTGCCCTGATCTCCCCGATGCTAGCCGCGGATGAGTCCGATGAGGTCGTTGAGTCAGTAACCGATTACATCTCCGATCTGCCGGATGAGTGCTTGGCTTGCATTTTCCAGTCACTCGGCTCCGGCGACCGGAAAAGATGCTCTCTGGTCTGCCGGCGGTGGCTGACGGTCGAGGGACAGAGCCGTCACCGCCTCTCCCTCAACGCGCACGCGGATCTACAGCCCGCCATCCTTTCCCTCTTCTCACGGTTCGACGCCGTCACCAAACTCGCTCTGAAATGCGACCGCAGAGCCATCAGCATCGGCGACGAGGCGCTCGATCTCATCTCGCTGCGGTGCCAGAACCTCACGCGCCTGAAGCTGCGCGCGTGCCGCGAGTTGACCGACGCAGGCATGCTGGCGTTTGCGAAAAACTGCAAGGCTTTGAAGAAGCTCTCCTGTGGGTCGTGCACCTTCGGAGCCAAGGGAATGAACGCCGTGCTGGAAAATTGCTCGGCGCTGGAAGAGTTATCGGTGAAGCGGCTCCGTGGTATTGGGCCGGAGGGTTCTGCGGTGGAGCCCATTGGGCCGGGCGTCGCTGCCTCGTCGCTCAAGACGATTTGCCTGAAAGAGCTTTACAATGGACAGTGTTTCGGGCCGCTTATAATCGGCGCAAAGAATCTGAGGACTCTGAAGCTTTTCAGGTGCGGTGGGGATTGGGATAAGCTTCTTCAAGTGATAGCGGAGCGAGTCACGTCCATGGTTGAAATCCATCTGGAAAAGCTTCAGGTTAGTGACGTTGCGCTGGCCGCAATCTCCAATTGCTTGGATCTGGAAATTTTACACCTGGTCAAAACGCCGGACTGCACAAATGTAGGTCTGATTTCGGTCTCGGAACGCTGCAAGCTCTTGAGGAAGCTTCACATTGACGGCTGGAAGTCAAACCGTGTGGGAGATGAAGGCTTGATTTCGGTGGCCAAGAGTTGCCCCAACCTTCAGGAATTGGTTCTTATCGGCGTCAATCCAACCAAAGCGAGCTTGGAAACGTTGGCGGCGAATTGCCCCAATCTGGAGAGGTTGGCATTGTGCGGGAGTGATACAGTAGGCGATCCGGAGCTTTTGTGCATTGCTGCCAAATGTGGAGCATTGAAGAAGCTTTGCATTAAGAGCTGCCCTGTGTCTGATGTTGGCCTCGAAGGACTGGCCAGTGGGTGCCCTAATATGGTGAAAGTGAAGGTTAAGAAGTGTAGGCTAGTAACACCCGAGGGTGCTGATTCTTTGAGGGCAAAGAGGCCTACATTGGCTGTGAATTTGGACACTGGTGAGCCTCCACAAGACGCCAGTGCCAGTGACGGAGGGGCACAAGATAACCCTGCTGTTGAATTCCTTCCGCTGGCCACACAACCAGCGTTTCCTGACATTGCTTCAAGCAGTACAGGGAGGTCTGCGTCCTTTAAGTCAAGGTTAAGCCTTTTATCTGGAAGGACCCTTGTGGCTTGCACTCTGAGAAGGTGGGTAAGTCGGAATAGTTAG

Protein Analysis

529

Amino Acids

56.66

Weight (kDa)

8.77

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 50 - 81 7.5e-08 F-box domain
F-box-like PF12937 50 - 81 2.2e-07 F-box-like
LRR_At5g56370 PF24758 319 - 385 1.8e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47056 AT4G07400
fragaria_vesca FvH4_2g33740
malus_domestica MD08G1093600.v1.1 MD15G1077300.v1.1
prunus_persica Prupe.1G430700_v2.0.a1
pyrus_communis pycom08g07610 pycom12g16540 pycom15g07200
rosa_chinensis RchiOBHm_Chr6g0308811
rosa_laevigata RLG00000010616
rosa_multiflora Rmu_sc0004046.1_g000006
rosa_roxburghii Rroxscaffold_7G00159900
rosa_rugosa Rorug06G0368300
rosa_samantha Rh6AG479700 Rh6BG489300 Rh6CG494800 Rh6DG480000
rosa_wichuraiana Rw6G041820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 722
AasI GACNNNNNNGTC 1 cut(s) 261
AccB1I GGYRCC 2 cut(s) 414, 1269
AccII CGCG 7 cut(s) 107, 284, 290, 430, 444, 446, 453
AccIII TCCGGA 1 cut(s) 1168
AclI AACGTT 1 cut(s) 1103
AclWI GGATC 3 cut(s) 300, 894, 1160
AcoI YGGCCR 4 cut(s) 864, 1032, 1260, 1452
AcsI RAATTY 3 cut(s) 894, 1366, 1439
AcuI CTGAAG 4 cut(s) 455, 770, 827, 1037
AcyI GRCGYC 4 cut(s) 333, 651, 1074, 1395
AfaI GTAC 1 cut(s) 1492
AfiI CCNNNNNNNGG 4 cut(s) 207, 1126, 1279, 1450
AgsI TTSAA 6 cut(s) 505, 791, 824, 1207, 1439, 1485
AjiI CACGTC 1 cut(s) 813
AjnI CCWGG 1 cut(s) 903
Alw21I GWGCWC 1 cut(s) 530
Alw26I GTCTC 1 cut(s) 952
Alw44I GTGCAC 1 cut(s) 526
AlwI GGATC 3 cut(s) 300, 894, 1160
Ama87I CYCGRG 1 cut(s) 1319
Aor13HI TCCGGA 1 cut(s) 1168
ApaLI GTGCAC 1 cut(s) 526
ApeKI GCWGC 7 cut(s) 23, 409, 439, 656, 957, 1187, 1227
ApoI RAATTY 3 cut(s) 894, 1366, 1439
Asp700I GAANNNNTTC 4 cut(s) 755, 840, 1062, 1443
AspLEI GCGC 8 cut(s) 286, 394, 432, 444, 446, 577, 731, 862
AspS9I GGNCC 5 cut(s) 4, 614, 644, 713, 1542
AsuC2I CCSGG 1 cut(s) 648
AsuHPI GGTGA 5 cut(s) 257, 331, 604, 1294, 1391
AsuNHI GCTAGC 1 cut(s) 100
AvaI CYCGRG 1 cut(s) 1319
AvaII GGWCC 1 cut(s) 1542
BaeGI GKGCMC 3 cut(s) 530, 1274, 1420
BalI TGGCCA 3 cut(s) 1034, 1262, 1454
BanI GGYRCC 2 cut(s) 414, 1269
BanII GRGCYC 1 cut(s) 639
Bbv12I GWGCWC 1 cut(s) 530
BbvI GCAGC 7 cut(s) 35, 396, 426, 643, 944, 1174, 1214
BccI CCATC 3 cut(s) 314, 380, 837
BceAI ACGGC 5 cut(s) 24, 246, 320, 539, 1003
BciT130I CCWGG 1 cut(s) 905
BcnI CCSGG 1 cut(s) 648
BcoDI GTCTC 1 cut(s) 952
BfaI CTAG 2 cut(s) 101, 1310
BfmI CTRYAG 1 cut(s) 296
BfoI RGCGCY 2 cut(s) 395, 578
BglI GCCNNNNNGGC 1 cut(s) 643
Bme1390I CCNGG 2 cut(s) 648, 905
Bme18I GGWCC 1 cut(s) 1542
BmeT110I CYCGRG 1 cut(s) 1319
BmgBI CACGTC 1 cut(s) 813
BmgT120I GGNCC 5 cut(s) 4, 614, 644, 713, 1542
BmiI GGNNCC 7 cut(s) 199, 416, 538, 602, 636, 1271, 1544
BmrFI CCNGG 2 cut(s) 648, 905
BmsI GCATC 3 cut(s) 87, 206, 387
BmtI GCTAGC 1 cut(s) 104
BpmI CTGGAG 1 cut(s) 1148
BpuEI CTTGAG 2 cut(s) 653, 988
BpuMI CCSGG 1 cut(s) 648
Bsa29I ATCGAT 1 cut(s) 61
BsaHI GRCGYC 4 cut(s) 333, 651, 1074, 1395
BsaI GGTCTC 1 cut(s) 952
BsaJI CCNNGG 5 cut(s) 105, 540, 604, 816, 1320
BsaWI WCCGGW 2 cut(s) 207, 1168
BsaXI ACNNNNNCTCC 4 cut(s) 257, 287, 1163, 1193
Bsc4I CCNNNNNNNGG 4 cut(s) 207, 1126, 1279, 1450
Bse118I RCCGGY 1 cut(s) 231
Bse1I ACTGG 7 cut(s) 7, 187, 1263, 1263, 1381, 1398, 1404
Bse3DI GCAATG 2 cut(s) 1182, 1476
BseAI TCCGGA 1 cut(s) 1168
BseBI CCWGG 1 cut(s) 905
BseCI ATCGAT 1 cut(s) 61
BseDI CCNNGG 5 cut(s) 105, 540, 604, 816, 1320
BseGI GGATG 3 cut(s) 115, 169, 306
BseLI CCNNNNNNNGG 4 cut(s) 207, 1126, 1279, 1450
BseMI GCAATG 2 cut(s) 1182, 1476
BseMII CTCAG 2 cut(s) 731, 1553
BseNI ACTGG 7 cut(s) 7, 187, 1263, 1263, 1381, 1398, 1404
BsePI GCGCGC 1 cut(s) 442
BseSI GKGCMC 3 cut(s) 530, 1274, 1420
BseXI GCAGC 7 cut(s) 35, 396, 426, 643, 944, 1174, 1214
BsgI GTGCAG 1 cut(s) 907
Bsh1236I CGCG 7 cut(s) 107, 284, 290, 430, 444, 446, 453
Bsh1285I CGRYCG 3 cut(s) 208, 249, 364
BshNI GGYRCC 2 cut(s) 414, 1269
BshVI ATCGAT 1 cut(s) 61
BsiEI CGRYCG 3 cut(s) 208, 249, 364
BsiHKAI GWGCWC 1 cut(s) 530
BsiHKCI CYCGRG 1 cut(s) 1319
BsiSI CCGG 8 cut(s) 161, 201, 208, 232, 617, 647, 917, 1169
BslFI GGGAC 1 cut(s) 267
BslI CCNNNNNNNGG 4 cut(s) 207, 1126, 1279, 1450
BsmAI GTCTC 1 cut(s) 952
BsmFI GGGAC 1 cut(s) 267
Bso31I GGTCTC 1 cut(s) 952
BsoBI CYCGRG 1 cut(s) 1319
Bsp1286I GDGCHC 4 cut(s) 530, 639, 1274, 1420
Bsp13I TCCGGA 1 cut(s) 1168
Bsp143I GATC 7 cut(s) 62, 87, 154, 292, 397, 886, 1165
Bsp19I CCATGG 1 cut(s) 816
BspCNI CTCAG 2 cut(s) 732, 1554
BspDI ATCGAT 1 cut(s) 61
BspEI TCCGGA 1 cut(s) 1168
BspFNI CGCG 7 cut(s) 107, 284, 290, 430, 444, 446, 453
BspLI GGNNCC 7 cut(s) 199, 416, 538, 602, 636, 1271, 1544
BspOI GCTAGC 1 cut(s) 104
BspPI GGATC 3 cut(s) 300, 894, 1160
BspT107I GGYRCC 2 cut(s) 414, 1269
BspTNI GGTCTC 1 cut(s) 952
BsrDI GCAATG 2 cut(s) 1182, 1476
BsrFI RCCGGY 1 cut(s) 231
BsrI ACTGG 7 cut(s) 7, 187, 1263, 1263, 1381, 1398, 1404
BssAI RCCGGY 1 cut(s) 231
BssECI CCNNGG 5 cut(s) 105, 540, 604, 816, 1320
BssHII GCGCGC 1 cut(s) 442
BssMI GATC 7 cut(s) 62, 87, 154, 292, 397, 886, 1165
BssNI GRCGYC 4 cut(s) 333, 651, 1074, 1395
BssT1I CCWWGG 2 cut(s) 540, 816
Bst2UI CCWGG 1 cut(s) 905
Bst4CI ACNGT 5 cut(s) 247, 327, 705, 1004, 1159
Bst6I CTCTTC 2 cut(s) 323, 576
BstACI GRCGYC 4 cut(s) 333, 651, 1074, 1395
BstDEI CTNAG 3 cut(s) 66, 740, 1562
BstDSI CCRYGG 3 cut(s) 105, 604, 816
BstF5I GGATG 3 cut(s) 115, 169, 306
BstFNI CGCG 7 cut(s) 107, 284, 290, 430, 444, 446, 453
BstH2I RGCGCY 2 cut(s) 395, 578
BstHHI GCGC 8 cut(s) 286, 394, 432, 444, 446, 577, 731, 862
BstKTI GATC 7 cut(s) 65, 90, 157, 295, 400, 889, 1168
BstMAI GTCTC 1 cut(s) 952
BstMBI GATC 7 cut(s) 62, 87, 154, 292, 397, 886, 1165
BstMCI CGRYCG 3 cut(s) 208, 249, 364
BstMWI GCNNNNNNNGC 8 cut(s) 20, 177, 267, 436, 450, 643, 866, 1224
BstNI CCWGG 1 cut(s) 905
BstNSI RCATGY 1 cut(s) 475
BstSCI CCNGG 2 cut(s) 646, 903
BstSFI CTRYAG 1 cut(s) 296
BstSLI GKGCMC 3 cut(s) 530, 1274, 1420
BstUI CGCG 7 cut(s) 107, 284, 290, 430, 444, 446, 453
BstV1I GCAGC 7 cut(s) 35, 396, 426, 643, 944, 1174, 1214
BstX2I RGATCY 2 cut(s) 292, 886
BstXI CCANNNNNNTGG 1 cut(s) 883
BstYI RGATCY 2 cut(s) 292, 886
Bsu15I ATCGAT 1 cut(s) 61
BsuTUI ATCGAT 1 cut(s) 61
BtgI CCRYGG 3 cut(s) 105, 604, 816
BtrI CACGTC 1 cut(s) 813
BtsCI GGATG 3 cut(s) 115, 169, 306
BtsIMutI CAGTG 5 cut(s) 710, 1270, 1374, 1405, 1411
CfoI GCGC 8 cut(s) 286, 394, 432, 444, 446, 577, 731, 862
Cfr10I RCCGGY 1 cut(s) 231
Cfr13I GGNCC 5 cut(s) 4, 614, 644, 713, 1542
Cfr42I CCGCGG 1 cut(s) 108
ClaI ATCGAT 1 cut(s) 61
CseI GACGC 6 cut(s) 341, 473, 640, 1063, 1403, 1494
CsiI ACCWGGT 1 cut(s) 903
Csp6I GTAC 1 cut(s) 1491
CspCI CAANNNNNGTGG 2 cut(s) 987, 1022
CviAII CATG 2 cut(s) 472, 817
CviQI GTAC 1 cut(s) 1491
DdeI CTNAG 3 cut(s) 66, 740, 1562
DpnI GATC 7 cut(s) 64, 89, 156, 294, 399, 888, 1167
DpnII GATC 7 cut(s) 62, 87, 154, 292, 397, 886, 1165
DrdI GACNNNNNNGTC 1 cut(s) 261
DseDI GACNNNNNNGTC 1 cut(s) 261
EaeI YGGCCR 4 cut(s) 864, 1032, 1260, 1452
Eam1104I CTCTTC 2 cut(s) 323, 576
EarI CTCTTC 2 cut(s) 323, 576
Eco130I CCWWGG 2 cut(s) 540, 816
Eco147I AGGCCT 1 cut(s) 1351
Eco24I GRGCYC 1 cut(s) 639
Eco31I GGTCTC 1 cut(s) 952
Eco47I GGWCC 1 cut(s) 1542
Eco57I CTGAAG 4 cut(s) 455, 770, 827, 1037
Eco88I CYCGRG 1 cut(s) 1319
EcoO109I RGGNCCY 1 cut(s) 1542
EcoRI GAATTC 1 cut(s) 1439
EcoRII CCWGG 1 cut(s) 903
EcoT14I CCWWGG 2 cut(s) 540, 816
EcoT38I GRGCYC 1 cut(s) 639
ErhI CCWWGG 2 cut(s) 540, 816
FaeI CATG 2 cut(s) 475, 820
FaiI YATR 4 cut(s) 473, 722, 818, 1280
FaqI GGGAC 1 cut(s) 267
FatI CATG 2 cut(s) 471, 816
FauI CCCGC 2 cut(s) 310, 1139
FokI GGATG 3 cut(s) 122, 176, 293
FriOI GRGCYC 1 cut(s) 639
FspBI CTAG 2 cut(s) 101, 1310
GlaI GCGC 8 cut(s) 285, 393, 431, 443, 445, 576, 730, 861
GsuI CTGGAG 1 cut(s) 1148
HaeII RGCGCY 2 cut(s) 395, 578
HapII CCGG 8 cut(s) 161, 201, 208, 232, 617, 647, 917, 1169
HgaI GACGC 6 cut(s) 341, 473, 640, 1063, 1403, 1494
HhaI GCGC 8 cut(s) 286, 394, 432, 444, 446, 577, 731, 862
Hin1I GRCGYC 4 cut(s) 333, 651, 1074, 1395
Hin1II CATG 2 cut(s) 475, 820
Hin6I GCGC 8 cut(s) 284, 392, 430, 442, 444, 575, 729, 860
HinP1I GCGC 8 cut(s) 284, 392, 430, 442, 444, 575, 729, 860
HincII GTYRAC 1 cut(s) 459
HindII GTYRAC 1 cut(s) 459
HindIII AAGCTT 5 cut(s) 752, 782, 839, 974, 1211
HinfI GANTC 6 cut(s) 113, 131, 736, 745, 807, 1331
HpaII CCGG 8 cut(s) 161, 201, 208, 232, 617, 647, 917, 1169
HphI GGTGA 5 cut(s) 257, 331, 604, 1294, 1391
Hpy166II GTNNAC 2 cut(s) 459, 528
Hpy188III TCNNGA 9 cut(s) 670, 833, 890, 967, 1055, 1127, 1169, 1472, 1536
Hpy8I GTNNAC 2 cut(s) 459, 528
Hpy99I CGWCG 5 cut(s) 335, 389, 467, 656, 667
HpyAV CCTTC 8 cut(s) 541, 1010, 1061, 1247, 1285, 1454, 1533, 1560
HpyCH4III ACNGT 5 cut(s) 247, 327, 705, 1004, 1159
HpyCH4IV ACGT 3 cut(s) 812, 855, 1103
HpyCH4V TGCA 8 cut(s) 180, 495, 528, 924, 960, 1182, 1218, 1557
HpyF10VI GCNNNNNNNGC 8 cut(s) 20, 177, 267, 436, 450, 643, 866, 1224
HpyF3I CTNAG 3 cut(s) 66, 740, 1562
HpySE526I ACGT 3 cut(s) 812, 855, 1103
Hsp92I GRCGYC 4 cut(s) 333, 651, 1074, 1395
Hsp92II CATG 2 cut(s) 475, 820
HspAI GCGC 8 cut(s) 284, 392, 430, 442, 444, 575, 729, 860
Kpn2I TCCGGA 1 cut(s) 1168
KroI GCCGGC 1 cut(s) 231
KroNI GCCGGC 1 cut(s) 233
KspI CCGCGG 1 cut(s) 108
Kzo9I GATC 7 cut(s) 62, 87, 154, 292, 397, 886, 1165
LmnI GCTCC 7 cut(s) 203, 536, 606, 634, 802, 1171, 1199
Lsp1109I GCAGC 7 cut(s) 35, 396, 426, 643, 944, 1174, 1214
LweI GCATC 3 cut(s) 87, 206, 387
MabI ACCWGGT 1 cut(s) 903
MaeI CTAG 2 cut(s) 101, 1310
MaeII ACGT 3 cut(s) 812, 855, 1103
MaeIII GTNAC 8 cut(s) 136, 189, 263, 337, 808, 851, 1312, 1406
MalI GATC 7 cut(s) 64, 89, 156, 294, 399, 888, 1167
MboI GATC 7 cut(s) 62, 87, 154, 292, 397, 886, 1165
MboII GAAGA 5 cut(s) 310, 517, 593, 779, 1219
MfeI CAATTG 1 cut(s) 877
MflI RGATCY 2 cut(s) 292, 886
MhlI GDGCHC 4 cut(s) 530, 639, 1274, 1420
MlsI TGGCCA 3 cut(s) 1034, 1262, 1454
MluCI AATT 8 cut(s) 27, 565, 877, 894, 1058, 1114, 1366, 1439
MluNI TGGCCA 3 cut(s) 1034, 1262, 1454
MlyI GAGTC 4 cut(s) 122, 140, 739, 816
MmeI TCCRAC 2 cut(s) 1106, 1559
Mox20I TGGCCA 3 cut(s) 1034, 1262, 1454
MroI TCCGGA 1 cut(s) 1168
MroNI GCCGGC 1 cut(s) 231
MroXI GAANNNNTTC 4 cut(s) 755, 840, 1062, 1443
MscI TGGCCA 3 cut(s) 1034, 1262, 1454
MseI TTAA 4 cut(s) 1221, 1296, 1512, 1523
MslI CAYNNNNRTG 1 cut(s) 815
Msp20I TGGCCA 3 cut(s) 1034, 1262, 1454
MspA1I CMGCKG 2 cut(s) 107, 1450
MspI CCGG 8 cut(s) 161, 201, 208, 232, 617, 647, 917, 1169
MspR9I CCNGG 2 cut(s) 648, 905
MunI CAATTG 1 cut(s) 877
MvaI CCWGG 1 cut(s) 905
MvnI CGCG 7 cut(s) 107, 284, 290, 430, 444, 446, 453
MwoI GCNNNNNNNGC 8 cut(s) 20, 177, 267, 436, 450, 643, 866, 1224
NaeI GCCGGC 1 cut(s) 233
NciI CCSGG 1 cut(s) 648
NcoI CCATGG 1 cut(s) 816
NdeII GATC 7 cut(s) 62, 87, 154, 292, 397, 886, 1165
NgoMIV GCCGGC 1 cut(s) 231
NheI GCTAGC 1 cut(s) 100
NlaIII CATG 2 cut(s) 475, 820
NlaIV GGNNCC 7 cut(s) 199, 416, 538, 602, 636, 1271, 1544
NmeAIII GCCGAG 2 cut(s) 174, 551
NmuCI GTSAC 6 cut(s) 189, 263, 337, 808, 851, 1406
NspI RCATGY 1 cut(s) 475
PaeI GCATGC 1 cut(s) 475
PauI GCGCGC 1 cut(s) 442
PceI AGGCCT 1 cut(s) 1351
PcsI WCGNNNNNNNCGW 4 cut(s) 201, 393, 671, 1109
PdiI GCCGGC 1 cut(s) 233
PdmI GAANNNNTTC 4 cut(s) 755, 840, 1062, 1443
PfeI GAWTC 2 cut(s) 736, 1331
PflFI GACNNNGTC 1 cut(s) 335
PleI GAGTC 4 cut(s) 121, 139, 739, 815
PpsI GAGTC 4 cut(s) 121, 139, 739, 815
PpuMI RGGWCCY 1 cut(s) 1542
PsiI TTATAA 1 cut(s) 722
Psp1406I AACGTT 1 cut(s) 1103
Psp5II RGGWCCY 1 cut(s) 1542
Psp6I CCWGG 1 cut(s) 903
PspGI CCWGG 1 cut(s) 903
PspN4I GGNNCC 7 cut(s) 199, 416, 538, 602, 636, 1271, 1544
PspPI GGNCC 5 cut(s) 4, 614, 644, 713, 1542
PspPPI RGGWCCY 1 cut(s) 1542
PsuI RGATCY 2 cut(s) 292, 886
PsyI GACNNNGTC 1 cut(s) 335
PteI GCGCGC 1 cut(s) 442
RsaI GTAC 1 cut(s) 1492
RsaNI GTAC 1 cut(s) 1491
RseI CAYNNNNRTG 1 cut(s) 815
SacII CCGCGG 1 cut(s) 108
SaqAI TTAA 4 cut(s) 1221, 1296, 1512, 1523
Sau3AI GATC 7 cut(s) 62, 87, 154, 292, 397, 886, 1165
Sau96I GGNCC 5 cut(s) 4, 614, 644, 713, 1542
SchI GAGTC 4 cut(s) 122, 140, 739, 816
ScrFI CCNGG 2 cut(s) 648, 905
SduI GDGCHC 4 cut(s) 530, 639, 1274, 1420
SexAI ACCWGGT 1 cut(s) 903
SfaNI GCATC 3 cut(s) 87, 206, 387
SfcI CTRYAG 1 cut(s) 296
Sfr303I CCGCGG 1 cut(s) 108
SgrBI CCGCGG 1 cut(s) 108
SinI GGWCC 1 cut(s) 1542
SmiMI CAYNNNNRTG 1 cut(s) 815
SmlI CTYRAG 2 cut(s) 668, 967
SmoI CTYRAG 2 cut(s) 668, 967
SphI GCATGC 1 cut(s) 475
Sse9I AATT 8 cut(s) 27, 565, 877, 894, 1058, 1114, 1366, 1439
SseBI AGGCCT 1 cut(s) 1351
SspMI CTAG 2 cut(s) 101, 1310
StuI AGGCCT 1 cut(s) 1351
StyD4I CCNGG 2 cut(s) 646, 903
StyI CCWWGG 2 cut(s) 540, 816
TaaI ACNGT 5 cut(s) 247, 327, 705, 1004, 1159
TaiI ACGT 3 cut(s) 815, 858, 1106
TaqI TCGA 5 cut(s) 61, 249, 330, 396, 1251
TaqII GACCGA 2 cut(s) 476, 934
TasI AATT 8 cut(s) 27, 565, 877, 894, 1058, 1114, 1366, 1439
TatI WGTACW 1 cut(s) 1490
TauI GCSGC 8 cut(s) 23, 39, 107, 453, 601, 718, 869, 1112
TfiI GAWTC 2 cut(s) 736, 1331
Tru1I TTAA 4 cut(s) 1221, 1296, 1512, 1523
Tru9I TTAA 4 cut(s) 1221, 1296, 1512, 1523
TscAI CASTG 5 cut(s) 710, 1270, 1381, 1405, 1411
TseFI GTSAC 6 cut(s) 189, 263, 337, 808, 851, 1406
TseI GCWGC 7 cut(s) 23, 409, 439, 656, 957, 1187, 1227
Tsp45I GTSAC 6 cut(s) 189, 263, 337, 808, 851, 1406
TspDTI ATGAA 2 cut(s) 563, 1029
TspGWI ACGGA 2 cut(s) 593, 1425
TspRI CASTG 5 cut(s) 710, 1270, 1381, 1405, 1411
Tth111I GACNNNGTC 1 cut(s) 335
VneI GTGCAC 1 cut(s) 526
VpaK11BI GGWCC 1 cut(s) 1542
XapI RAATTY 3 cut(s) 894, 1366, 1439
XceI RCATGY 1 cut(s) 475
XcmI CCANNNNNNNNNTGG 1 cut(s) 1093
XmnI GAANNNNTTC 4 cut(s) 755, 840, 1062, 1443
XspI CTAG 2 cut(s) 101, 1310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.