Prupe.1G430700_v2.0.a1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012273
Physical Location & Seq
Forward (+)
36915334 .. 36917455
2122 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G430700.1

Sequence Viewer

Length: 1602 bp
ATGGGCCAGTCAGCTTCGGCGGCCGCAATCCCAAGTCGCCGTGAAAGCAACCGCGACAGCAATCGCTCCAAGCCCAAATCAACGGCTGCGATCTGCCCCATGGAGGCCGAGGACGAATCTTCTGAGATCGTCAACGCGGCCTATGACTTCATCTCCGATCTTCCGGACGAGTGCTTGGCTTGTATATTTCAGTCCCTCGGCTCCCGCGATCGGAAACAATGCTCTCTGGTCTGCCTTCGGTGGTTGAGGATCGAGGGACAGAGCCGTCACCGTCTCTCCCTCGACGCCAAATCAGATCTCCTCCCTTTTATCCCTTCCCTATTCTCTCGCTTCGACGCCGTCACCAAACTCGCTCTCAAATGTGACCGCAAAGTTGTTAGCATCGGCGACGAAGCGCTCGCCCTCATATCTCTGCGCTGCCGTAACCTCACGCGCCTAAAGCTCCGCGCGTGCCGCGAGTTGACCGATGCCGGCATGTCGTCGTTCGCCAAAAATTGCAAGGCCTTGAAGAAGCTGTCGTGCGGGTCGTGCACGTTCGGAGCTAAAGGAATGAACGCAGTGCTTGACAATTGCTCGGCTCTGGAAGAGTTATCGGTGAAGCGGCTTCGCGGCATCACGGACGGAGCCGCAGCCGAGCCGATCGGGCCCGGCGTAGCTGCCTCGTCGCTCAAAACGATTTGCCTCAAAGAGCTCTACAATGGACAGTGCTTCGGTCCTCTCATAATGGGCGCGAAGAATCTGAGGACTCTGAAGCTTTTCAGGTGCTCTGGCGATTGGGACAAGCTTCTCCAGGTGATAGCAGAGCGAGTCACCTCCATGGTTGAGATCCATCTAGAAAAGCTTCAGGTCAGTGACGTAGGCCTCGCTGCCATCTCCAATTGTTTGGATCTGGAGATTCTACACCTGGTCAAGACCCCTGAGTGCACAAATGTAGGTTTGGTCTCGGTCGCCCAACGCTGTAAGCTTCTACGGAAGCTTCACATTGATGGCTGGAAGGCCAACCGAGTCGGAGACGAAGGTTTGGTCGCGGTGGCCATGAGCTGCCCTAACCTTCAGGAATTGGTGCTCATCGGTGTCAATCCAACGAGAGTGAGCTTGGAGACTCTAGCTTCGAATTGCCCAAACCTAGAGAGACTGGCATTGTGCGGAAGCGACACCGTCGGCGATGTCGAGATTTCGTGCATTGCGGCGAAATGCGTAGCTTTGAAGAAACTTTGCATCAAGAGCTGCCCGGTTTCGGACATCGGCCTCAAAGCGTTGGCCAGTGGGTGCCCTAATATGGTGAAAGTGAAGCTCAAGAAATGCAGAGGAGTGACAGCGGAGGGTGCCGATTGGTTGAGGGCAAGCAGGCCTGCGTTGGCTGTGAATTTAGATACAGGGGAAACAATCCAAGACAACAGTGCCAGTGACGGTGGGGCCAACGATAATAACGCCGTCGAATTGCCGGCGGCGTTGGCCATCCAACCGGTGTTTCTGGGTATTGCGTCATCGAGCAGTACGGGGCGGTCGACGACCTCGTTTAAGTCGAGATTGGGACTATTGACTGGGAGGAATTTTGTGGTTTGCGCCCTGAGAAGGTGGTCAAGTCGGAATAATAGTTAG

Protein Analysis

534

Amino Acids

57.16

Weight (kDa)

8.9

Isoelectric Point (pI)

46.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47056 AT4G07400
fragaria_vesca FvH4_2g33740
malus_domestica MD08G1093600.v1.1 MD15G1077300.v1.1
prunus_persica Prupe.1G430700_v2.0.a1
pyrus_communis pycom08g07610 pycom12g16540 pycom15g07200
rosa_chinensis RchiOBHm_Chr6g0308811
rosa_laevigata RLG00000010616
rosa_multiflora Rmu_sc0004046.1_g000006
rosa_roxburghii Rroxscaffold_7G00159900
rosa_rugosa Rorug06G0368300
rosa_samantha Rh6AG479700 Rh6BG489300 Rh6CG494800 Rh6DG480000
rosa_wichuraiana Rw6G041820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 264
AccB1I GGYRCC 2 cut(s) 1269, 1325
AccI GTMKAC 1 cut(s) 1508
AccIII TCCGGA 1 cut(s) 163
AclWI GGATC 3 cut(s) 257, 820, 894
AcoI YGGCCR 4 cut(s) 21, 1032, 1260, 1455
AcsI RAATTY 2 cut(s) 1366, 1552
AcuI CTGAAG 3 cut(s) 770, 827, 1037
AcyI GRCGYC 2 cut(s) 285, 336
AfaI GTAC 1 cut(s) 1498
AfeI AGCGCT 1 cut(s) 396
AfiI CCNNNNNNNGG 5 cut(s) 103, 210, 1237, 1279, 1575
AgeI ACCGGT 1 cut(s) 1465
AgsI TTSAA 2 cut(s) 508, 1207
AjnI CCWGG 2 cut(s) 789, 903
AjuI GAANNNNNNNTTGG 2 cut(s) 1455, 1487
Alw21I GWGCWC 5 cut(s) 533, 693, 767, 926, 1068
Alw26I GTCTC 5 cut(s) 278, 946, 1005, 1094, 1126
Alw44I GTGCAC 2 cut(s) 529, 922
AlwI GGATC 3 cut(s) 257, 820, 894
Aor13HI TCCGGA 1 cut(s) 163
Aor51HI AGCGCT 1 cut(s) 396
ApaI GGGCCC 1 cut(s) 648
ApaLI GTGCAC 2 cut(s) 529, 922
ApeKI GCWGC 7 cut(s) 86, 417, 629, 656, 866, 1041, 1227
ApoI RAATTY 2 cut(s) 1366, 1552
ArsI GACNNNNNNTTYG 4 cut(s) 1008, 1040, 1093, 1125
AsiGI ACCGGT 1 cut(s) 1465
Asp700I GAANNNNTTC 2 cut(s) 755, 840
AspLEI GCGC 6 cut(s) 397, 417, 435, 449, 731, 1568
AspS9I GGNCC 5 cut(s) 4, 644, 645, 713, 1416
AsuC2I CCSGG 2 cut(s) 648, 1232
AsuHPI GGTGA 6 cut(s) 260, 334, 607, 802, 805, 1294
AsuII TTCGAA 1 cut(s) 1112
AvaII GGWCC 1 cut(s) 713
BaeGI GKGCMC 4 cut(s) 533, 648, 926, 1274
BalI TGGCCA 3 cut(s) 1034, 1262, 1457
BanI GGYRCC 2 cut(s) 1269, 1325
BanII GRGCYC 2 cut(s) 648, 693
Bbv12I GWGCWC 5 cut(s) 533, 693, 767, 926, 1068
BbvI GCAGC 7 cut(s) 73, 404, 641, 643, 853, 1028, 1214
BccI CCATC 4 cut(s) 837, 878, 980, 1466
BceAI ACGGC 6 cut(s) 24, 99, 249, 323, 405, 1418
BciT130I CCWGG 2 cut(s) 791, 905
BcnI CCSGG 2 cut(s) 648, 1232
BcoDI GTCTC 5 cut(s) 278, 946, 1005, 1094, 1126
BfaI CTAG 3 cut(s) 833, 1106, 1127
BfoI RGCGCY 1 cut(s) 398
BglI GCCNNNNNGGC 1 cut(s) 643
BglII AGATCT 1 cut(s) 295
Bme1390I CCNGG 4 cut(s) 648, 791, 905, 1232
Bme18I GGWCC 1 cut(s) 713
BmgT120I GGNCC 5 cut(s) 4, 644, 645, 713, 1416
BmiI GGNNCC 6 cut(s) 202, 625, 646, 1271, 1327, 1417
BmrFI CCNGG 4 cut(s) 648, 791, 905, 1232
BmrI ACTGGG 1 cut(s) 1554
BmsI GCATC 4 cut(s) 390, 457, 621, 1227
BmuI ACTGGG 1 cut(s) 1554
BpmI CTGGAG 2 cut(s) 773, 911
Bpu14I TTCGAA 1 cut(s) 1112
BpuEI CTTGAG 1 cut(s) 1280
BpuMI CCSGG 2 cut(s) 648, 1232
BsaHI GRCGYC 2 cut(s) 285, 336
BsaI GGTCTC 1 cut(s) 946
BsaJI CCNNGG 4 cut(s) 99, 108, 196, 816
BsaWI WCCGGW 2 cut(s) 163, 1465
BsaXI ACNNNNNCTCC 4 cut(s) 137, 167, 260, 290
Bsc4I CCNNNNNNNGG 5 cut(s) 103, 210, 1237, 1279, 1575
Bse118I RCCGGY 3 cut(s) 470, 1444, 1465
Bse1I ACTGG 5 cut(s) 7, 1140, 1263, 1404, 1549
Bse3DI GCAATG 1 cut(s) 1182
BseAI TCCGGA 1 cut(s) 163
BseBI CCWGG 2 cut(s) 791, 905
BseDI CCNNGG 4 cut(s) 99, 108, 196, 816
BseGI GGATG 1 cut(s) 1458
BseLI CCNNNNNNNGG 5 cut(s) 103, 210, 1237, 1279, 1575
BseMI GCAATG 1 cut(s) 1182
BseMII CTCAG 4 cut(s) 114, 731, 909, 1562
BseNI ACTGG 5 cut(s) 7, 1140, 1263, 1404, 1549
BseRI GAGGAG 2 cut(s) 290, 1323
BseSI GKGCMC 4 cut(s) 533, 648, 926, 1274
BseX3I CGGCCG 1 cut(s) 21
BseXI GCAGC 7 cut(s) 73, 404, 641, 643, 853, 1028, 1214
Bsh1285I CGRYCG 5 cut(s) 24, 211, 642, 948, 1508
BshNI GGYRCC 2 cut(s) 1269, 1325
BshTI ACCGGT 1 cut(s) 1465
BsiEI CGRYCG 5 cut(s) 24, 211, 642, 948, 1508
BsiHKAI GWGCWC 5 cut(s) 533, 693, 767, 926, 1068
BsiSI CCGG 6 cut(s) 164, 471, 648, 1232, 1445, 1466
BslFI GGGAC 4 cut(s) 178, 270, 791, 1548
BslI CCNNNNNNNGG 5 cut(s) 103, 210, 1237, 1279, 1575
BsmAI GTCTC 5 cut(s) 278, 946, 1005, 1094, 1126
BsmBI CGTCTC 2 cut(s) 278, 1005
BsmFI GGGAC 4 cut(s) 178, 270, 791, 1548
Bso31I GGTCTC 1 cut(s) 946
Bsp119I TTCGAA 1 cut(s) 1112
Bsp120I GGGCCC 1 cut(s) 644
Bsp1286I GDGCHC 7 cut(s) 533, 648, 693, 767, 926, 1068, 1274
Bsp13I TCCGGA 1 cut(s) 163
Bsp143I GATC 9 cut(s) 90, 126, 157, 208, 249, 295, 639, 825, 886
Bsp19I CCATGG 2 cut(s) 99, 816
BspCNI CTCAG 4 cut(s) 115, 732, 910, 1563
BspEI TCCGGA 1 cut(s) 163
BspLI GGNNCC 6 cut(s) 202, 625, 646, 1271, 1327, 1417
BspPI GGATC 3 cut(s) 257, 820, 894
BspT104I TTCGAA 1 cut(s) 1112
BspT107I GGYRCC 2 cut(s) 1269, 1325
BspTNI GGTCTC 1 cut(s) 946
BsrDI GCAATG 1 cut(s) 1182
BsrFI RCCGGY 3 cut(s) 470, 1444, 1465
BsrI ACTGG 5 cut(s) 7, 1140, 1263, 1404, 1549
BssAI RCCGGY 3 cut(s) 470, 1444, 1465
BssECI CCNNGG 4 cut(s) 99, 108, 196, 816
BssMI GATC 9 cut(s) 90, 126, 157, 208, 249, 295, 639, 825, 886
BssNI GRCGYC 2 cut(s) 285, 336
BssT1I CCWWGG 2 cut(s) 99, 816
Bst2UI CCWGG 2 cut(s) 791, 905
Bst4CI ACNGT 5 cut(s) 272, 705, 1159, 1400, 1412
Bst6I CTCTTC 1 cut(s) 579
BstACI GRCGYC 2 cut(s) 285, 336
BstBI TTCGAA 1 cut(s) 1112
BstC8I GCNNGC 7 cut(s) 399, 451, 472, 1345, 1349, 1353, 1446
BstDEI CTNAG 4 cut(s) 123, 740, 918, 1571
BstDSI CCRYGG 2 cut(s) 99, 816
BstF5I GGATG 1 cut(s) 1458
BstH2I RGCGCY 1 cut(s) 398
BstHHI GCGC 6 cut(s) 397, 417, 435, 449, 731, 1568
BstKTI GATC 9 cut(s) 93, 129, 160, 211, 252, 298, 642, 828, 889
BstMAI GTCTC 5 cut(s) 278, 946, 1005, 1094, 1126
BstMBI GATC 9 cut(s) 90, 126, 157, 208, 249, 295, 639, 825, 886
BstMCI CGRYCG 5 cut(s) 24, 211, 642, 948, 1508
BstMWI GCNNNNNNNGC 9 cut(s) 20, 45, 439, 453, 528, 643, 1224, 1325, 1454
BstNI CCWGG 2 cut(s) 791, 905
BstNSI RCATGY 1 cut(s) 478
BstSCI CCNGG 4 cut(s) 646, 789, 903, 1230
BstSLI GKGCMC 4 cut(s) 533, 648, 926, 1274
BstV1I GCAGC 7 cut(s) 73, 404, 641, 643, 853, 1028, 1214
BstX2I RGATCY 3 cut(s) 295, 825, 886
BstXI CCANNNNNNTGG 1 cut(s) 883
BstYI RGATCY 3 cut(s) 295, 825, 886
BstZI CGGCCG 1 cut(s) 21
BtgI CCRYGG 2 cut(s) 99, 816
BtgZI GCGATG 1 cut(s) 1179
BtsCI GGATG 1 cut(s) 1458
BtsI GCAGTG 1 cut(s) 564
BtsIMutI CAGTG 6 cut(s) 564, 710, 856, 1270, 1405, 1411
Cac8I GCNNGC 7 cut(s) 399, 451, 472, 1345, 1349, 1353, 1446
CciNI GCGGCCGC 1 cut(s) 21
CfoI GCGC 6 cut(s) 397, 417, 435, 449, 731, 1568
Cfr10I RCCGGY 3 cut(s) 470, 1444, 1465
Cfr13I GGNCC 5 cut(s) 4, 644, 645, 713, 1416
CseI GACGC 3 cut(s) 293, 344, 1473
CsiI ACCWGGT 1 cut(s) 903
Csp6I GTAC 1 cut(s) 1497
CspAI ACCGGT 1 cut(s) 1465
CviAII CATG 4 cut(s) 100, 475, 817, 1036
CviQI GTAC 1 cut(s) 1497
DdeI CTNAG 4 cut(s) 123, 740, 918, 1571
DpnI GATC 9 cut(s) 92, 128, 159, 210, 251, 297, 641, 827, 888
DpnII GATC 9 cut(s) 90, 126, 157, 208, 249, 295, 639, 825, 886
DrdI GACNNNNNNGTC 1 cut(s) 264
DseDI GACNNNNNNGTC 1 cut(s) 264
EaeI YGGCCR 4 cut(s) 21, 1032, 1260, 1455
EagI CGGCCG 1 cut(s) 21
Eam1104I CTCTTC 1 cut(s) 579
EarI CTCTTC 1 cut(s) 579
Ecl136II GAGCTC 1 cut(s) 691
EclXI CGGCCG 1 cut(s) 21
Eco130I CCWWGG 2 cut(s) 99, 816
Eco147I AGGCCT 3 cut(s) 503, 861, 1351
Eco24I GRGCYC 2 cut(s) 648, 693
Eco31I GGTCTC 1 cut(s) 946
Eco47I GGWCC 1 cut(s) 713
Eco47III AGCGCT 1 cut(s) 396
Eco52I CGGCCG 1 cut(s) 21
Eco53kI GAGCTC 1 cut(s) 691
Eco57I CTGAAG 3 cut(s) 770, 827, 1037
EcoICRI GAGCTC 1 cut(s) 691
EcoRII CCWGG 2 cut(s) 789, 903
EcoT14I CCWWGG 2 cut(s) 99, 816
EcoT38I GRGCYC 2 cut(s) 648, 693
ErhI CCWWGG 2 cut(s) 99, 816
Esp3I CGTCTC 2 cut(s) 278, 1005
FaeI CATG 4 cut(s) 103, 478, 820, 1039
FaiI YATR 9 cut(s) 101, 144, 185, 407, 476, 722, 818, 1037, 1280
FaqI GGGAC 4 cut(s) 178, 270, 791, 1548
FatI CATG 4 cut(s) 99, 474, 816, 1035
FauI CCCGC 2 cut(s) 212, 515
FblI GTMKAC 1 cut(s) 1508
FokI GGATG 1 cut(s) 1445
FriOI GRGCYC 2 cut(s) 648, 693
FspBI CTAG 3 cut(s) 833, 1106, 1127
GlaI GCGC 6 cut(s) 396, 416, 434, 448, 730, 1567
GsuI CTGGAG 2 cut(s) 773, 911
HaeII RGCGCY 1 cut(s) 398
HapII CCGG 6 cut(s) 164, 471, 648, 1232, 1445, 1466
HgaI GACGC 3 cut(s) 293, 344, 1473
HhaI GCGC 6 cut(s) 397, 417, 435, 449, 731, 1568
Hin1I GRCGYC 2 cut(s) 285, 336
Hin1II CATG 4 cut(s) 103, 478, 820, 1039
Hin6I GCGC 6 cut(s) 395, 415, 433, 447, 729, 1566
HinP1I GCGC 6 cut(s) 395, 415, 433, 447, 729, 1566
HincII GTYRAC 3 cut(s) 133, 462, 1509
HindII GTYRAC 3 cut(s) 133, 462, 1509
HindIII AAGCTT 5 cut(s) 752, 782, 839, 962, 974
HinfI GANTC 7 cut(s) 116, 736, 745, 807, 895, 1005, 1102
HpaII CCGG 6 cut(s) 164, 471, 648, 1232, 1445, 1466
HphI GGTGA 6 cut(s) 260, 334, 607, 802, 805, 1294
Hpy166II GTNNAC 5 cut(s) 133, 462, 531, 924, 1509
Hpy8I GTNNAC 5 cut(s) 133, 462, 531, 924, 1509
Hpy99I CGWCG 8 cut(s) 287, 338, 392, 484, 667, 1163, 1439, 1513
HpyAV CCTTC 6 cut(s) 245, 324, 988, 1010, 1061, 1569
HpyCH4III ACNGT 5 cut(s) 272, 705, 1159, 1400, 1412
HpyCH4IV ACGT 2 cut(s) 533, 855
HpyCH4V TGCA 6 cut(s) 498, 531, 924, 1182, 1218, 1305
HpyF10VI GCNNNNNNNGC 9 cut(s) 20, 45, 439, 453, 528, 643, 1224, 1325, 1454
HpyF3I CTNAG 4 cut(s) 123, 740, 918, 1571
HpySE526I ACGT 2 cut(s) 533, 855
Hsp92I GRCGYC 2 cut(s) 285, 336
Hsp92II CATG 4 cut(s) 103, 478, 820, 1039
HspAI GCGC 6 cut(s) 395, 415, 433, 447, 729, 1566
Kpn2I TCCGGA 1 cut(s) 163
KroI GCCGGC 2 cut(s) 470, 1444
KroNI GCCGGC 2 cut(s) 472, 1446
Kzo9I GATC 9 cut(s) 90, 126, 157, 208, 249, 295, 639, 825, 886
LmnI GCTCC 5 cut(s) 71, 206, 447, 539, 623
Lsp1109I GCAGC 7 cut(s) 73, 404, 641, 643, 853, 1028, 1214
LweI GCATC 4 cut(s) 390, 457, 621, 1227
MabI ACCWGGT 1 cut(s) 903
MaeI CTAG 3 cut(s) 833, 1106, 1127
MaeII ACGT 2 cut(s) 533, 855
MaeIII GTNAC 8 cut(s) 266, 340, 362, 422, 808, 851, 1312, 1406
MalI GATC 9 cut(s) 92, 128, 159, 210, 251, 297, 641, 827, 888
MboI GATC 9 cut(s) 90, 126, 157, 208, 249, 295, 639, 825, 886
MboII GAAGA 6 cut(s) 111, 152, 520, 596, 745, 1219
MfeI CAATTG 2 cut(s) 568, 877
MflI RGATCY 3 cut(s) 295, 825, 886
MhlI GDGCHC 7 cut(s) 533, 648, 693, 767, 926, 1068, 1274
MlsI TGGCCA 3 cut(s) 1034, 1262, 1457
MluCI AATT 8 cut(s) 493, 568, 877, 1058, 1114, 1366, 1439, 1552
MluNI TGGCCA 3 cut(s) 1034, 1262, 1457
MlyI GAGTC 4 cut(s) 739, 816, 1014, 1096
MmeI TCCRAC 4 cut(s) 988, 1106, 1486, 1568
Mox20I TGGCCA 3 cut(s) 1034, 1262, 1457
MroI TCCGGA 1 cut(s) 163
MroNI GCCGGC 2 cut(s) 470, 1444
MroXI GAANNNNTTC 2 cut(s) 755, 840
MscI TGGCCA 3 cut(s) 1034, 1262, 1457
MseI TTAA 1 cut(s) 1521
MslI CAYNNNNRTG 2 cut(s) 815, 984
Msp20I TGGCCA 3 cut(s) 1034, 1262, 1457
MspA1I CMGCKG 1 cut(s) 1319
MspI CCGG 6 cut(s) 164, 471, 648, 1232, 1445, 1466
MspR9I CCNGG 4 cut(s) 648, 791, 905, 1232
MunI CAATTG 2 cut(s) 568, 877
MvaI CCWGG 2 cut(s) 791, 905
MwoI GCNNNNNNNGC 9 cut(s) 20, 45, 439, 453, 528, 643, 1224, 1325, 1454
NaeI GCCGGC 2 cut(s) 472, 1446
NciI CCSGG 2 cut(s) 648, 1232
NcoI CCATGG 2 cut(s) 99, 816
NdeII GATC 9 cut(s) 90, 126, 157, 208, 249, 295, 639, 825, 886
NgoMIV GCCGGC 2 cut(s) 470, 1444
NlaIII CATG 4 cut(s) 103, 478, 820, 1039
NlaIV GGNNCC 6 cut(s) 202, 625, 646, 1271, 1327, 1417
NmeAIII GCCGAG 4 cut(s) 133, 177, 554, 658
NmuCI GTSAC 7 cut(s) 266, 340, 362, 808, 851, 1312, 1406
NotI GCGGCCGC 1 cut(s) 21
NspI RCATGY 1 cut(s) 478
NspV TTCGAA 1 cut(s) 1112
PceI AGGCCT 3 cut(s) 503, 861, 1351
PcsI WCGNNNNNNNCGW 8 cut(s) 204, 524, 648, 671, 1167, 1505, 1514, 1523
PdiI GCCGGC 2 cut(s) 472, 1446
PdmI GAANNNNTTC 2 cut(s) 755, 840
PfeI GAWTC 3 cut(s) 116, 736, 895
PflFI GACNNNGTC 2 cut(s) 338, 1157
PinAI ACCGGT 1 cut(s) 1465
Ple19I CGATCG 2 cut(s) 211, 642
PleI GAGTC 4 cut(s) 739, 815, 1013, 1096
PpsI GAGTC 4 cut(s) 739, 815, 1013, 1096
Psp124BI GAGCTC 1 cut(s) 693
Psp6I CCWGG 2 cut(s) 789, 903
PspGI CCWGG 2 cut(s) 789, 903
PspN4I GGNNCC 6 cut(s) 202, 625, 646, 1271, 1327, 1417
PspOMI GGGCCC 1 cut(s) 644
PspPI GGNCC 5 cut(s) 4, 644, 645, 713, 1416
PsuI RGATCY 3 cut(s) 295, 825, 886
PsyI GACNNNGTC 2 cut(s) 338, 1157
PvuI CGATCG 2 cut(s) 211, 642
RsaI GTAC 1 cut(s) 1498
RsaNI GTAC 1 cut(s) 1497
RseI CAYNNNNRTG 2 cut(s) 815, 984
SacI GAGCTC 1 cut(s) 693
SalI GTCGAC 1 cut(s) 1507
SaqAI TTAA 1 cut(s) 1521
Sau3AI GATC 9 cut(s) 90, 126, 157, 208, 249, 295, 639, 825, 886
Sau96I GGNCC 5 cut(s) 4, 644, 645, 713, 1416
SchI GAGTC 4 cut(s) 739, 816, 1014, 1096
ScrFI CCNGG 4 cut(s) 648, 791, 905, 1232
SduI GDGCHC 7 cut(s) 533, 648, 693, 767, 926, 1068, 1274
SexAI ACCWGGT 1 cut(s) 903
SfaNI GCATC 4 cut(s) 390, 457, 621, 1227
SfuI TTCGAA 1 cut(s) 1112
SinI GGWCC 1 cut(s) 713
SmiMI CAYNNNNRTG 2 cut(s) 815, 984
SmlI CTYRAG 1 cut(s) 1295
SmoI CTYRAG 1 cut(s) 1295
Sse9I AATT 8 cut(s) 493, 568, 877, 1058, 1114, 1366, 1439, 1552
SseBI AGGCCT 3 cut(s) 503, 861, 1351
SspMI CTAG 3 cut(s) 833, 1106, 1127
SstI GAGCTC 1 cut(s) 693
StuI AGGCCT 3 cut(s) 503, 861, 1351
StyD4I CCNGG 4 cut(s) 646, 789, 903, 1230
StyI CCWWGG 2 cut(s) 99, 816
TaaI ACNGT 5 cut(s) 272, 705, 1159, 1400, 1412
TaiI ACGT 2 cut(s) 536, 858
TaqI TCGA 9 cut(s) 252, 282, 333, 1112, 1170, 1437, 1490, 1508, 1526
TaqII GACCGA 3 cut(s) 479, 701, 934
TasI AATT 8 cut(s) 493, 568, 877, 1058, 1114, 1366, 1439, 1552
TauI GCSGC 9 cut(s) 23, 26, 140, 456, 604, 612, 629, 1190, 1451
TfiI GAWTC 3 cut(s) 116, 736, 895
Tru1I TTAA 1 cut(s) 1521
Tru9I TTAA 1 cut(s) 1521
TscAI CASTG 6 cut(s) 564, 710, 856, 1270, 1405, 1411
TseFI GTSAC 7 cut(s) 266, 340, 362, 808, 851, 1312, 1406
TseI GCWGC 7 cut(s) 86, 417, 629, 656, 866, 1041, 1227
Tsp45I GTSAC 7 cut(s) 266, 340, 362, 808, 851, 1312, 1406
TspDTI ATGAA 2 cut(s) 139, 566
TspGWI ACGGA 3 cut(s) 632, 636, 985
TspRI CASTG 6 cut(s) 564, 710, 856, 1270, 1405, 1411
Tth111I GACNNNGTC 2 cut(s) 338, 1157
VneI GTGCAC 2 cut(s) 529, 922
VpaK11BI GGWCC 1 cut(s) 713
XapI RAATTY 2 cut(s) 1366, 1552
XbaI TCTAGA 1 cut(s) 832
XceI RCATGY 1 cut(s) 478
XmiI GTMKAC 1 cut(s) 1508
XmnI GAANNNNTTC 2 cut(s) 755, 840
XspI CTAG 3 cut(s) 833, 1106, 1127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.