No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G06536 |
| fragaria_vesca | FvH4_2g33990 |
| malus_domestica | MD08G1095800.v1.1 MD15G1078600.v1.1 |
| prunus_persica | Prupe.1G431800_v2.0.a1 |
| pyrus_communis | pycom08g07780 pycom08g07790 pycom15g07320 |
| rosa_chinensis | RchiOBHm_Chr6g0308391 |
| rosa_multiflora | Rmu_co8453189.1_g000001 Rmu_sc0005523.1_g000018 |
| rosa_samantha | Rh6AG475900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1130 |
| AatII | GACGTC | 1 cut(s) | 296 |
| AccB1I | GGYRCC | 1 cut(s) | 911 |
| AccI | GTMKAC | 2 cut(s) | 224, 1029 |
| AccII | CGCG | 2 cut(s) | 23, 328 |
| AclWI | GGATC | 4 cut(s) | 460, 1004, 1218, 1398 |
| AcoI | YGGCCR | 1 cut(s) | 1173 |
| AcsI | RAATTY | 3 cut(s) | 474, 715, 1082 |
| AcyI | GRCGYC | 2 cut(s) | 293, 912 |
| AfeI | AGCGCT | 1 cut(s) | 517 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 250, 572, 584 |
| AgsI | TTSAA | 5 cut(s) | 13, 496, 784, 956, 1162 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 851 |
| AjnI | CCWGG | 2 cut(s) | 487, 1134 |
| AluBI | AGCT | 7 cut(s) | 276, 435, 611, 827, 1051, 1193, 1261 |
| AluI | AGCT | 7 cut(s) | 276, 435, 611, 827, 1051, 1193, 1261 |
| Alw21I | GWGCWC | 2 cut(s) | 507, 1310 |
| Alw26I | GTCTC | 2 cut(s) | 367, 978 |
| Alw44I | GTGCAC | 1 cut(s) | 1306 |
| AlwI | GGATC | 4 cut(s) | 460, 1004, 1218, 1398 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 172 |
| Aor51HI | AGCGCT | 1 cut(s) | 517 |
| AoxI | GGCC | 3 cut(s) | 574, 1173, 1210 |
| ApaI | GGGCCC | 2 cut(s) | 578, 1214 |
| ApaLI | GTGCAC | 1 cut(s) | 1306 |
| ApoI | RAATTY | 3 cut(s) | 474, 715, 1082 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1318, 1350 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 592 |
| AspLEI | GCGC | 4 cut(s) | 41, 518, 863, 914 |
| AspS9I | GGNCC | 4 cut(s) | 574, 575, 1210, 1211 |
| AsuC2I | CCSGG | 6 cut(s) | 229, 248, 573, 882, 894, 1172 |
| AsuHPI | GGTGA | 1 cut(s) | 191 |
| BaeGI | GKGCMC | 3 cut(s) | 578, 1214, 1310 |
| BanI | GGYRCC | 1 cut(s) | 911 |
| BanII | GRGCYC | 2 cut(s) | 578, 1214 |
| Bbv12I | GWGCWC | 2 cut(s) | 507, 1310 |
| BccI | CCATC | 4 cut(s) | 75, 173, 929, 936 |
| BceAI | ACGGC | 2 cut(s) | 150, 661 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 458, 492, 889, 923 |
| BciT130I | CCWGG | 2 cut(s) | 489, 1136 |
| BclI | TGATCA | 1 cut(s) | 549 |
| BcnI | CCSGG | 6 cut(s) | 229, 248, 573, 882, 894, 1172 |
| BcoDI | GTCTC | 2 cut(s) | 367, 978 |
| BfaI | CTAG | 3 cut(s) | 522, 1109, 1332 |
| BfmI | CTRYAG | 2 cut(s) | 141, 173 |
| BfoI | RGCGCY | 3 cut(s) | 519, 864, 915 |
| Bme1390I | CCNGG | 8 cut(s) | 229, 248, 489, 573, 882, 894, 1136, 1172 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 851 |
| BmgT120I | GGNCC | 4 cut(s) | 574, 575, 1210, 1211 |
| BmiI | GGNNCC | 3 cut(s) | 576, 913, 1212 |
| BmrFI | CCNGG | 8 cut(s) | 229, 248, 489, 573, 882, 894, 1136, 1172 |
| BmrI | ACTGGG | 1 cut(s) | 1285 |
| BmsI | GCATC | 3 cut(s) | 909, 989, 1354 |
| BmuI | ACTGGG | 1 cut(s) | 1285 |
| BoxI | GACNNNNGTC | 1 cut(s) | 296 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1250, 1282 |
| BpmI | CTGGAG | 1 cut(s) | 1364 |
| BpuMI | CCSGG | 6 cut(s) | 229, 248, 573, 882, 894, 1172 |
| BsaBI | GATNNNNATC | 1 cut(s) | 807 |
| BsaHI | GRCGYC | 2 cut(s) | 293, 912 |
| BsaJI | CCNNGG | 7 cut(s) | 21, 247, 488, 1144, 1170, 1269, 1314 |
| BsaWI | WCCGGW | 1 cut(s) | 356 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 739, 769 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 250, 572, 584 |
| Bse1I | ACTGG | 2 cut(s) | 1291, 1347 |
| Bse8I | GATNNNNATC | 1 cut(s) | 807 |
| BseBI | CCWGG | 2 cut(s) | 489, 1136 |
| BseDI | CCNNGG | 7 cut(s) | 21, 247, 488, 1144, 1170, 1269, 1314 |
| BseGI | GGATG | 5 cut(s) | 184, 286, 390, 805, 1004 |
| BseJI | GATNNNNATC | 1 cut(s) | 807 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 250, 572, 584 |
| BseMII | CTCAG | 1 cut(s) | 1029 |
| BseNI | ACTGG | 2 cut(s) | 1291, 1347 |
| BseRI | GAGGAG | 4 cut(s) | 570, 760, 791, 1083 |
| BseSI | GKGCMC | 3 cut(s) | 578, 1214, 1310 |
| BseYI | CCCAGC | 2 cut(s) | 276, 435 |
| Bsh1236I | CGCG | 2 cut(s) | 23, 328 |
| Bsh1285I | CGRYCG | 1 cut(s) | 228 |
| BshFI | GGCC | 3 cut(s) | 576, 1175, 1212 |
| BshNI | GGYRCC | 1 cut(s) | 911 |
| BsiEI | CGRYCG | 1 cut(s) | 228 |
| BsiHKAI | GWGCWC | 2 cut(s) | 507, 1310 |
| BsiSI | CCGG | 8 cut(s) | 228, 247, 357, 425, 572, 881, 893, 1172 |
| BslFI | GGGAC | 1 cut(s) | 990 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 250, 572, 584 |
| BsmAI | GTCTC | 2 cut(s) | 367, 978 |
| BsmFI | GGGAC | 1 cut(s) | 990 |
| BsmI | GAATGC | 1 cut(s) | 1238 |
| BsnI | GGCC | 3 cut(s) | 576, 1175, 1212 |
| Bsp120I | GGGCCC | 2 cut(s) | 574, 1210 |
| Bsp1286I | GDGCHC | 4 cut(s) | 507, 578, 1214, 1310 |
| Bsp143I | GATC | 9 cut(s) | 66, 400, 452, 549, 621, 1009, 1223, 1277, 1403 |
| Bsp19I | CCATGG | 1 cut(s) | 1269 |
| Bsp68I | TCGCGA | 1 cut(s) | 328 |
| BspANI | GGCC | 3 cut(s) | 576, 1175, 1212 |
| BspCNI | CTCAG | 1 cut(s) | 1030 |
| BspFNI | CGCG | 2 cut(s) | 23, 328 |
| BspLI | GGNNCC | 3 cut(s) | 576, 913, 1212 |
| BspMAI | CTGCAG | 2 cut(s) | 145, 177 |
| BspPI | GGATC | 4 cut(s) | 460, 1004, 1218, 1398 |
| BspT107I | GGYRCC | 1 cut(s) | 911 |
| BsrI | ACTGG | 2 cut(s) | 1291, 1347 |
| BssECI | CCNNGG | 7 cut(s) | 21, 247, 488, 1144, 1170, 1269, 1314 |
| BssMI | GATC | 9 cut(s) | 66, 400, 452, 549, 621, 1009, 1223, 1277, 1403 |
| BssNAI | GTATAC | 1 cut(s) | 1030 |
| BssNI | GRCGYC | 2 cut(s) | 293, 912 |
| BssT1I | CCWWGG | 3 cut(s) | 1144, 1269, 1314 |
| Bst1107I | GTATAC | 1 cut(s) | 1030 |
| Bst2UI | CCWGG | 2 cut(s) | 489, 1136 |
| Bst4CI | ACNGT | 2 cut(s) | 154, 1132 |
| BstACI | GRCGYC | 2 cut(s) | 293, 912 |
| BstC8I | GCNNGC | 4 cut(s) | 18, 115, 173, 397 |
| BstDEI | CTNAG | 1 cut(s) | 1038 |
| BstDSI | CCRYGG | 2 cut(s) | 21, 1269 |
| BstF5I | GGATG | 5 cut(s) | 184, 286, 390, 805, 1004 |
| BstFNI | CGCG | 2 cut(s) | 23, 328 |
| BstH2I | RGCGCY | 3 cut(s) | 519, 864, 915 |
| BstHHI | GCGC | 4 cut(s) | 41, 518, 863, 914 |
| BstKTI | GATC | 9 cut(s) | 69, 403, 455, 552, 624, 1012, 1226, 1280, 1406 |
| BstMAI | GTCTC | 2 cut(s) | 367, 978 |
| BstMBI | GATC | 9 cut(s) | 66, 400, 452, 549, 621, 1009, 1223, 1277, 1403 |
| BstMCI | CGRYCG | 1 cut(s) | 228 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 29, 38, 123, 143, 396, 536, 918, 1209 |
| BstNI | CCWGG | 2 cut(s) | 489, 1136 |
| BstNSI | RCATGY | 3 cut(s) | 20, 223, 1061 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 296 |
| BstSCI | CCNGG | 8 cut(s) | 227, 246, 487, 571, 880, 892, 1134, 1170 |
| BstSFI | CTRYAG | 2 cut(s) | 141, 173 |
| BstSLI | GKGCMC | 3 cut(s) | 578, 1214, 1310 |
| BstUI | CGCG | 2 cut(s) | 23, 328 |
| BstX2I | RGATCY | 2 cut(s) | 1223, 1403 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 935 |
| BstYI | RGATCY | 2 cut(s) | 1223, 1403 |
| BstZ17I | GTATAC | 1 cut(s) | 1030 |
| BsuRI | GGCC | 3 cut(s) | 576, 1175, 1212 |
| BtgI | CCRYGG | 2 cut(s) | 21, 1269 |
| BtgZI | GCGATG | 1 cut(s) | 94 |
| BtsCI | GGATG | 5 cut(s) | 184, 286, 390, 805, 1004 |
| BtsI | GCAGTG | 1 cut(s) | 1066 |
| BtsIMutI | CAGTG | 4 cut(s) | 1035, 1066, 1119, 1298 |
| BtuMI | TCGCGA | 1 cut(s) | 328 |
| Cac8I | GCNNGC | 4 cut(s) | 18, 115, 173, 397 |
| CaiI | CAGNNNCTG | 1 cut(s) | 172 |
| CfoI | GCGC | 4 cut(s) | 41, 518, 863, 914 |
| Cfr13I | GGNCC | 4 cut(s) | 574, 575, 1210, 1211 |
| Cfr42I | CCGCGG | 1 cut(s) | 24 |
| CseI | GACGC | 1 cut(s) | 314 |
| DdeI | CTNAG | 1 cut(s) | 1038 |
| DinI | GGCGCC | 1 cut(s) | 913 |
| DpnI | GATC | 9 cut(s) | 68, 402, 454, 551, 623, 1011, 1225, 1279, 1405 |
| DpnII | GATC | 9 cut(s) | 66, 400, 452, 549, 621, 1009, 1223, 1277, 1403 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1130 |
| DriI | GACNNNNNGTC | 1 cut(s) | 851 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1130 |
| EaeI | YGGCCR | 1 cut(s) | 1173 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 851 |
| Eco130I | CCWWGG | 3 cut(s) | 1144, 1269, 1314 |
| Eco24I | GRGCYC | 2 cut(s) | 578, 1214 |
| Eco32I | GATATC | 1 cut(s) | 1419 |
| Eco47III | AGCGCT | 1 cut(s) | 517 |
| EcoO109I | RGGNCCY | 2 cut(s) | 575, 1211 |
| EcoRI | GAATTC | 2 cut(s) | 715, 1082 |
| EcoRII | CCWGG | 2 cut(s) | 487, 1134 |
| EcoRV | GATATC | 1 cut(s) | 1419 |
| EcoT14I | CCWWGG | 3 cut(s) | 1144, 1269, 1314 |
| EcoT38I | GRGCYC | 2 cut(s) | 578, 1214 |
| EgeI | GGCGCC | 1 cut(s) | 913 |
| EheI | GGCGCC | 1 cut(s) | 913 |
| ErhI | CCWWGG | 3 cut(s) | 1144, 1269, 1314 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1016, 1048 |
| FaqI | GGGAC | 1 cut(s) | 990 |
| FauI | CCCGC | 2 cut(s) | 609, 995 |
| FbaI | TGATCA | 1 cut(s) | 549 |
| FblI | GTMKAC | 2 cut(s) | 224, 1029 |
| FokI | GGATG | 5 cut(s) | 191, 273, 397, 812, 1011 |
| FriOI | GRGCYC | 2 cut(s) | 578, 1214 |
| FspBI | CTAG | 3 cut(s) | 522, 1109, 1332 |
| GlaI | GCGC | 4 cut(s) | 40, 517, 862, 913 |
| GsaI | CCCAGC | 2 cut(s) | 280, 439 |
| GsuI | CTGGAG | 1 cut(s) | 1364 |
| HaeII | RGCGCY | 3 cut(s) | 519, 864, 915 |
| HaeIII | GGCC | 3 cut(s) | 576, 1175, 1212 |
| HapII | CCGG | 8 cut(s) | 228, 247, 357, 425, 572, 881, 893, 1172 |
| HgaI | GACGC | 1 cut(s) | 314 |
| HhaI | GCGC | 4 cut(s) | 41, 518, 863, 914 |
| Hin1I | GRCGYC | 2 cut(s) | 293, 912 |
| Hin6I | GCGC | 4 cut(s) | 39, 516, 861, 912 |
| HinP1I | GCGC | 4 cut(s) | 39, 516, 861, 912 |
| HincII | GTYRAC | 2 cut(s) | 225, 1141 |
| HindII | GTYRAC | 2 cut(s) | 225, 1141 |
| HindIII | AAGCTT | 1 cut(s) | 609 |
| HpaII | CCGG | 8 cut(s) | 228, 247, 357, 425, 572, 881, 893, 1172 |
| HphI | GGTGA | 1 cut(s) | 191 |
| Hpy166II | GTNNAC | 6 cut(s) | 104, 225, 1030, 1066, 1141, 1308 |
| Hpy188I | TCNGA | 8 cut(s) | 8, 291, 727, 905, 961, 1048, 1078, 1363 |
| Hpy188III | TCNNGA | 6 cut(s) | 258, 327, 372, 698, 932, 1337 |
| Hpy8I | GTNNAC | 6 cut(s) | 104, 225, 1030, 1066, 1141, 1308 |
| Hpy99I | CGWCG | 5 cut(s) | 151, 154, 295, 647, 857 |
| HpyAV | CCTTC | 4 cut(s) | 607, 668, 1018, 1168 |
| HpyCH4III | ACNGT | 2 cut(s) | 154, 1132 |
| HpyCH4IV | ACGT | 2 cut(s) | 100, 293 |
| HpyCH4V | TGCA | 9 cut(s) | 32, 143, 175, 188, 469, 1057, 1071, 1238, 1308 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 29, 38, 123, 143, 396, 536, 918, 1209 |
| HpyF3I | CTNAG | 1 cut(s) | 1038 |
| HpySE526I | ACGT | 2 cut(s) | 100, 293 |
| Hsp92I | GRCGYC | 2 cut(s) | 293, 912 |
| HspAI | GCGC | 4 cut(s) | 39, 516, 861, 912 |
| KasI | GGCGCC | 1 cut(s) | 911 |
| Ksp22I | TGATCA | 1 cut(s) | 549 |
| KspI | CCGCGG | 1 cut(s) | 24 |
| Kzo9I | GATC | 9 cut(s) | 66, 400, 452, 549, 621, 1009, 1223, 1277, 1403 |
| LmnI | GCTCC | 1 cut(s) | 1258 |
| LweI | GCATC | 3 cut(s) | 909, 989, 1354 |
| MaeI | CTAG | 3 cut(s) | 522, 1109, 1332 |
| MaeII | ACGT | 2 cut(s) | 100, 293 |
| MaeIII | GTNAC | 3 cut(s) | 89, 298, 1334 |
| MalI | GATC | 9 cut(s) | 68, 402, 454, 551, 623, 1011, 1225, 1279, 1405 |
| MboI | GATC | 9 cut(s) | 66, 400, 452, 549, 621, 1009, 1223, 1277, 1403 |
| MboII | GAAGA | 5 cut(s) | 345, 694, 796, 1259, 1413 |
| MfeI | CAATTG | 1 cut(s) | 1281 |
| MflI | RGATCY | 2 cut(s) | 1223, 1403 |
| MhlI | GDGCHC | 4 cut(s) | 507, 578, 1214, 1310 |
| Mly113I | GGCGCC | 1 cut(s) | 912 |
| MlyI | GAGTC | 3 cut(s) | 474, 840, 1280 |
| MmeI | TCCRAC | 2 cut(s) | 314, 1127 |
| MroXI | GAANNNNTTC | 1 cut(s) | 592 |
| MseI | TTAA | 5 cut(s) | 512, 669, 687, 795, 942 |
| MslI | CAYNNNNRTG | 1 cut(s) | 933 |
| MspA1I | CMGCKG | 4 cut(s) | 23, 120, 268, 276 |
| MspI | CCGG | 8 cut(s) | 228, 247, 357, 425, 572, 881, 893, 1172 |
| MspR9I | CCNGG | 8 cut(s) | 229, 248, 489, 573, 882, 894, 1136, 1172 |
| MunI | CAATTG | 1 cut(s) | 1281 |
| Mva1269I | GAATGC | 1 cut(s) | 1238 |
| MvaI | CCWGG | 2 cut(s) | 489, 1136 |
| MvnI | CGCG | 2 cut(s) | 23, 328 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 29, 38, 123, 143, 396, 536, 918, 1209 |
| NarI | GGCGCC | 1 cut(s) | 912 |
| NciI | CCSGG | 6 cut(s) | 229, 248, 573, 882, 894, 1172 |
| NcoI | CCATGG | 1 cut(s) | 1269 |
| NdeII | GATC | 9 cut(s) | 66, 400, 452, 549, 621, 1009, 1223, 1277, 1403 |
| NlaIV | GGNNCC | 3 cut(s) | 576, 913, 1212 |
| NmuCI | GTSAC | 2 cut(s) | 298, 1334 |
| NruI | TCGCGA | 1 cut(s) | 328 |
| NspI | RCATGY | 3 cut(s) | 20, 223, 1061 |
| PaeI | GCATGC | 1 cut(s) | 20 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 368 |
| PctI | GAATGC | 1 cut(s) | 1238 |
| PdmI | GAANNNNTTC | 1 cut(s) | 592 |
| PfeI | GAWTC | 7 cut(s) | 330, 694, 728, 906, 956, 1043, 1358 |
| PflFI | GACNNNGTC | 1 cut(s) | 367 |
| PfoI | TCCNGGA | 1 cut(s) | 892 |
| PleI | GAGTC | 3 cut(s) | 474, 840, 1280 |
| PluTI | GGCGCC | 1 cut(s) | 915 |
| PpsI | GAGTC | 3 cut(s) | 474, 840, 1280 |
| PshAI | GACNNNNGTC | 1 cut(s) | 296 |
| Psp6I | CCWGG | 2 cut(s) | 487, 1134 |
| PspFI | CCCAGC | 2 cut(s) | 276, 435 |
| PspGI | CCWGG | 2 cut(s) | 487, 1134 |
| PspN4I | GGNNCC | 3 cut(s) | 576, 913, 1212 |
| PspOMI | GGGCCC | 2 cut(s) | 574, 1210 |
| PspPI | GGNCC | 4 cut(s) | 574, 575, 1210, 1211 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 224, 256 |
| PstI | CTGCAG | 2 cut(s) | 145, 177 |
| PstNI | CAGNNNCTG | 1 cut(s) | 172 |
| PsuI | RGATCY | 2 cut(s) | 1223, 1403 |
| PsyI | GACNNNGTC | 1 cut(s) | 367 |
| PvuII | CAGCTG | 1 cut(s) | 276 |
| RruI | TCGCGA | 1 cut(s) | 328 |
| RseI | CAYNNNNRTG | 1 cut(s) | 933 |
| SacII | CCGCGG | 1 cut(s) | 24 |
| SalI | GTCGAC | 1 cut(s) | 223 |
| SaqAI | TTAA | 5 cut(s) | 512, 669, 687, 795, 942 |
| Sau3AI | GATC | 9 cut(s) | 66, 400, 452, 549, 621, 1009, 1223, 1277, 1403 |
| Sau96I | GGNCC | 4 cut(s) | 574, 575, 1210, 1211 |
| SbfI | CCTGCAGG | 1 cut(s) | 177 |
| SchI | GAGTC | 3 cut(s) | 474, 840, 1280 |
| ScrFI | CCNGG | 8 cut(s) | 229, 248, 489, 573, 882, 894, 1136, 1172 |
| SdaI | CCTGCAGG | 1 cut(s) | 177 |
| SduI | GDGCHC | 4 cut(s) | 507, 578, 1214, 1310 |
| SfaNI | GCATC | 3 cut(s) | 909, 989, 1354 |
| SfcI | CTRYAG | 2 cut(s) | 141, 173 |
| SfoI | GGCGCC | 1 cut(s) | 913 |
| Sfr303I | CCGCGG | 1 cut(s) | 24 |
| SgrBI | CCGCGG | 1 cut(s) | 24 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 933 |
| SphI | GCATGC | 1 cut(s) | 20 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 177 |
| SspDI | GGCGCC | 1 cut(s) | 911 |
| SspMI | CTAG | 3 cut(s) | 522, 1109, 1332 |
| StyD4I | CCNGG | 8 cut(s) | 227, 246, 487, 571, 880, 892, 1134, 1170 |
| StyI | CCWWGG | 3 cut(s) | 1144, 1269, 1314 |
| TaaI | ACNGT | 2 cut(s) | 154, 1132 |
| TaiI | ACGT | 2 cut(s) | 103, 296 |
| TaqI | TCGA | 8 cut(s) | 224, 362, 371, 459, 478, 662, 719, 839 |
| TauI | GCSGC | 7 cut(s) | 23, 123, 126, 140, 268, 542, 861 |
| TfiI | GAWTC | 7 cut(s) | 330, 694, 728, 906, 956, 1043, 1358 |
| Tru1I | TTAA | 5 cut(s) | 512, 669, 687, 795, 942 |
| Tru9I | TTAA | 5 cut(s) | 512, 669, 687, 795, 942 |
| TscAI | CASTG | 4 cut(s) | 1042, 1073, 1126, 1298 |
| TseFI | GTSAC | 2 cut(s) | 298, 1334 |
| Tsp45I | GTSAC | 2 cut(s) | 298, 1334 |
| TspDTI | ATGAA | 6 cut(s) | 185, 454, 728, 797, 837, 1260 |
| TspGWI | ACGGA | 3 cut(s) | 286, 317, 841 |
| TspRI | CASTG | 4 cut(s) | 1042, 1073, 1126, 1298 |
| Tth111I | GACNNNGTC | 1 cut(s) | 367 |
| VneI | GTGCAC | 1 cut(s) | 1306 |
| XapI | RAATTY | 3 cut(s) | 474, 715, 1082 |
| XceI | RCATGY | 3 cut(s) | 20, 223, 1061 |
| XmiI | GTMKAC | 2 cut(s) | 224, 1029 |
| XmnI | GAANNNNTTC | 1 cut(s) | 592 |
| XspI | CTAG | 3 cut(s) | 522, 1109, 1332 |
| ZraI | GACGTC | 1 cut(s) | 294 |