MD15G1078600.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0017515
Physical Location & Seq
Reverse (-)
5363117 .. 5365588
2472 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1078600.v1.1.491

Sequence Viewer

Length: 1422 bp
ATGTTCGGTTGGAAGCATGCCGCGGCGGTTGCAGTCTGCGTAGGGGTTGCTGCGGTCGTTGTTGTGATGGTTTTATGGCGATGGAATTGTTACAAGAAGCGTAAACAAAATGCTGGCAGCGGTGGCACGATGACAACGGCGGCAGCGACGACGGTTGTTAGGACAGAGAGTTTGCAAGATGGGATTCCAAAGCTTCATCGCCACCAACAACCAAGCAAAAGCATGTCGACCGGAAACAACTATTACGGCCGTGGGGTTTCCGGGAAGCCGCTGTTCAGCTGGGGCAATAATCCGACGTTCGTCACCGACGCCGTCGAGAATGGGTGGTCACGATTCGGCTTCACAAATTATCAGTCTTCTGGTTCGACAAGGTCGAGACTTTTGGGGATGTGCGCGGCCGGCGATCAGAGAGTTAGGGATGCACAGCCGGAGATAAGCTGGGAAGTATGTCAGGGATCAGCAGATTTCATGCAGAAAGTTCGACTCAATCCGGGGTCGAAAAAAGTGTCAAATTCATTAGGCACTGCTGCTTCTGCTGCCTCTGTGATAAAAACTGCGCTGCCTCTGCCAGGCCCTGCTCTCGGAAACAATTCCTTCCCGCAAGAAGCTTATTTCGAGATCACGATTTTGAGTCCGCGCGGCGGTGATGAAATGAGTCAGTCGATTGTCAAGGAAGGAGAGAAGATTAAATTGATTCAGAAGAGCTACGAAGAGAATCCGAGTTCAGATTCTTTGGTTCATGTAAGTAGTAGTAGTCAGAGTATTAGAAGAATTGAGGAGTTGAAGCTCAGTGTTAAGGATGATATTCATCATGGTAAAAATGAAGCTGTGTTGCTATCTGTTGGACTCTCCGTCGGCGGCGCTCTTCCGCTCAAACTTCCCGGGAGTTATCCGGGAAGCATCGGATTCGGCTCCAATGGCTCTGTCCATCTCGATGGGATGAAACTTGTGTTTGAATCTGAAAAAGCAACATGGGGAAAAAGAGACAGAGTGATTGGATGTGGTTTTGATCCCAAACAAAAGAAGGTATACTTCACTGTGGAATCAGAGCTGGTGCACGTGATCCACTGCCAATCAGAGGAATTCAGCACTCCTCTGTATCCAACCCTAGCAGCAAACACTGACATTACAGTCCTGGTCAACCTTGGTCAAAGTGCCTTCAAGTATGCCCCCGCCAATGCTCAGAGGACAGCTAACCCTTGCTTTGGGGGCCCTCTTGTGAGATCCTCCGCTGCTGCATTCTATGAAGATAGCATGGAGCTCTTCTCCATGGATAGAATTGACTCCCAGTGGCTCAACAGGTGCACAACCAAGGGCAACCAAAACCCTAACCATGAACTGGAGTTTGATGAGGAATCTGAAGCTGATTTGTTTGAGATTGTCTTGGAGAGTTGTGGAAGATCCCCGCACACAGTATCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SPRY

Protein Analysis

474

Amino Acids

51.34

Weight (kDa)

7.59

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017515)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G06536
fragaria_vesca FvH4_2g33990
malus_domestica MD08G1095800.v1.1 MD15G1078600.v1.1
prunus_persica Prupe.1G431800_v2.0.a1
pyrus_communis pycom08g07780 pycom08g07790 pycom15g07320
rosa_chinensis RchiOBHm_Chr6g0308391
rosa_multiflora Rmu_co8453189.1_g000001 Rmu_sc0005523.1_g000018
rosa_samantha Rh6AG475900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1130
AccB7I CCANNNNNTGG 1 cut(s) 1339
AccBSI CCGCTC 1 cut(s) 871
AccI GTMKAC 2 cut(s) 227, 1029
AccII CGCG 4 cut(s) 23, 395, 637, 639
AclWI GGATC 5 cut(s) 463, 1004, 1057, 1218, 1395
AcoI YGGCCR 2 cut(s) 247, 396
AcsI RAATTY 2 cut(s) 511, 1082
AcuI CTGAAG 1 cut(s) 1380
AcvI CACGTG 1 cut(s) 1060
AcyI GRCGYC 1 cut(s) 309
AfiI CCNNNNNNNGG 6 cut(s) 569, 581, 641, 1078, 1205, 1339
AgsI TTSAA 3 cut(s) 784, 956, 1162
AhdI GACNNNNNGTC 1 cut(s) 851
AjnI CCWGG 2 cut(s) 568, 1134
Alw21I GWGCWC 3 cut(s) 1059, 1263, 1307
Alw26I GTCTC 2 cut(s) 370, 978
Alw44I GTGCAC 2 cut(s) 1055, 1303
AlwI GGATC 5 cut(s) 463, 1004, 1057, 1218, 1395
AlwNI CAGNNNCTG 1 cut(s) 575
Ama87I CYCGRG 1 cut(s) 881
AoxI GGCC 4 cut(s) 247, 396, 571, 1210
ApaI GGGCCC 1 cut(s) 1214
ApaLI GTGCAC 2 cut(s) 1055, 1303
ApeKI GCWGC 9 cut(s) 50, 117, 143, 527, 536, 559, 1112, 1232, 1235
ApoI RAATTY 2 cut(s) 511, 1082
ArsI GACNNNNNNTTYG 6 cut(s) 154, 186, 338, 370, 491, 523
Asp700I GAANNNNTTC 1 cut(s) 589
AspLEI GCGC 4 cut(s) 395, 559, 639, 863
AspS9I GGNCC 3 cut(s) 572, 1210, 1211
AsuC2I CCSGG 5 cut(s) 262, 492, 882, 883, 894
AsuHPI GGTGA 2 cut(s) 295, 656
AvaI CYCGRG 1 cut(s) 881
BaeGI GKGCMC 3 cut(s) 1059, 1214, 1307
BanII GRGCYC 2 cut(s) 1214, 1263
BbrPI CACGTG 1 cut(s) 1060
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 3 cut(s) 1059, 1263, 1307
BbvI GCAGC 9 cut(s) 37, 129, 155, 514, 523, 546, 1124, 1219, 1222
BccI CCATC 5 cut(s) 61, 75, 173, 929, 936
BceAI ACGGC 4 cut(s) 153, 234, 262, 296
BcgI CGANNNNNNTGC 4 cut(s) 461, 495, 889, 923
BciT130I CCWGG 2 cut(s) 570, 1136
BciVI GTATCC 1 cut(s) 1110
BcnI CCSGG 5 cut(s) 262, 492, 882, 883, 894
BcoDI GTCTC 2 cut(s) 370, 978
BfaI CTAG 1 cut(s) 1109
BfoI RGCGCY 1 cut(s) 864
BfuI GTATCC 1 cut(s) 1110
Bme1390I CCNGG 7 cut(s) 262, 492, 570, 882, 883, 894, 1136
BmeRI GACNNNNNGTC 1 cut(s) 851
BmeT110I CYCGRG 1 cut(s) 881
BmgT120I GGNCC 3 cut(s) 572, 1210, 1211
BmiI GGNNCC 3 cut(s) 913, 1211, 1212
BmrFI CCNGG 7 cut(s) 262, 492, 570, 882, 883, 894, 1136
BmrI ACTGGG 1 cut(s) 1282
BmsI GCATC 2 cut(s) 409, 909
BmuI ACTGGG 1 cut(s) 1282
BoxI GACNNNNGTC 1 cut(s) 299
BpiI GAAGAC 1 cut(s) 348
BplI GAGNNNNNCTC 2 cut(s) 1250, 1282
BpmI CTGGAG 1 cut(s) 1361
BpuMI CCSGG 5 cut(s) 262, 492, 882, 883, 894
BsaAI YACGTR 1 cut(s) 1060
BsaBI GATNNNNATC 1 cut(s) 807
BsaHI GRCGYC 1 cut(s) 309
BsaJI CCNNGG 7 cut(s) 21, 250, 491, 881, 1144, 1269, 1311
BsaWI WCCGGW 1 cut(s) 230
Bsc4I CCNNNNNNNGG 6 cut(s) 569, 581, 641, 1078, 1205, 1339
Bse118I RCCGGY 1 cut(s) 398
Bse1I ACTGG 2 cut(s) 1288, 1344
Bse8I GATNNNNATC 1 cut(s) 807
BseBI CCWGG 2 cut(s) 570, 1136
BseDI CCNNGG 7 cut(s) 21, 250, 491, 881, 1144, 1269, 1311
BseGI GGATG 5 cut(s) 393, 424, 805, 945, 1004
BseJI GATNNNNATC 1 cut(s) 807
BseLI CCNNNNNNNGG 6 cut(s) 569, 581, 641, 1078, 1205, 1339
BseMII CTCAG 2 cut(s) 802, 1196
BseNI ACTGG 2 cut(s) 1288, 1344
BseRI GAGGAG 2 cut(s) 791, 1083
BseSI GKGCMC 3 cut(s) 1059, 1214, 1307
BseX3I CGGCCG 2 cut(s) 247, 396
BseXI GCAGC 9 cut(s) 37, 129, 155, 514, 523, 546, 1124, 1219, 1222
BseYI CCCAGC 2 cut(s) 279, 438
Bsh1236I CGCG 4 cut(s) 23, 395, 637, 639
Bsh1285I CGRYCG 4 cut(s) 57, 231, 250, 399
BshFI GGCC 4 cut(s) 249, 398, 573, 1212
BsiEI CGRYCG 4 cut(s) 57, 231, 250, 399
BsiHKAI GWGCWC 3 cut(s) 1059, 1263, 1307
BsiHKCI CYCGRG 1 cut(s) 881
BsiSI CCGG 7 cut(s) 231, 261, 399, 428, 491, 882, 893
BslI CCNNNNNNNGG 6 cut(s) 569, 581, 641, 1078, 1205, 1339
BsmAI GTCTC 2 cut(s) 370, 978
BsmI GAATGC 1 cut(s) 1238
BsnI GGCC 4 cut(s) 249, 398, 573, 1212
BsoBI CYCGRG 1 cut(s) 881
Bsp120I GGGCCC 1 cut(s) 1210
Bsp1286I GDGCHC 4 cut(s) 1059, 1214, 1263, 1307
Bsp143I GATC 7 cut(s) 403, 455, 618, 1009, 1062, 1223, 1400
Bsp19I CCATGG 1 cut(s) 1269
BspANI GGCC 4 cut(s) 249, 398, 573, 1212
BspCNI CTCAG 2 cut(s) 801, 1195
BspFNI CGCG 4 cut(s) 23, 395, 637, 639
BspLI GGNNCC 3 cut(s) 913, 1211, 1212
BspPI GGATC 5 cut(s) 463, 1004, 1057, 1218, 1395
BspQI GCTCTTC 3 cut(s) 695, 870, 1268
BsrBI CCGCTC 1 cut(s) 871
BsrFI RCCGGY 1 cut(s) 398
BsrI ACTGG 2 cut(s) 1288, 1344
BssAI RCCGGY 1 cut(s) 398
BssECI CCNNGG 7 cut(s) 21, 250, 491, 881, 1144, 1269, 1311
BssMI GATC 7 cut(s) 403, 455, 618, 1009, 1062, 1223, 1400
BssNAI GTATAC 1 cut(s) 1030
BssNI GRCGYC 1 cut(s) 309
BssT1I CCWWGG 3 cut(s) 1144, 1269, 1311
Bst1107I GTATAC 1 cut(s) 1030
Bst2UI CCWGG 2 cut(s) 570, 1136
Bst4CI ACNGT 4 cut(s) 154, 1039, 1132, 1414
Bst6I CTCTTC 4 cut(s) 695, 705, 870, 1268
BstACI GRCGYC 1 cut(s) 309
BstBAI YACGTR 1 cut(s) 1060
BstC8I GCNNGC 3 cut(s) 18, 115, 400
BstDEI CTNAG 2 cut(s) 788, 1182
BstDSI CCRYGG 3 cut(s) 21, 250, 1269
BstENI CCTNNNNNAGG 1 cut(s) 567
BstF5I GGATG 5 cut(s) 393, 424, 805, 945, 1004
BstFNI CGCG 4 cut(s) 23, 395, 637, 639
BstH2I RGCGCY 1 cut(s) 864
BstHHI GCGC 4 cut(s) 395, 559, 639, 863
BstKTI GATC 7 cut(s) 406, 458, 621, 1012, 1065, 1226, 1403
BstMAI GTCTC 2 cut(s) 370, 978
BstMBI GATC 7 cut(s) 403, 455, 618, 1009, 1062, 1223, 1400
BstMCI CGRYCG 4 cut(s) 57, 231, 250, 399
BstMWI GCNNNNNNNGC 8 cut(s) 29, 123, 399, 533, 536, 565, 918, 1209
BstNI CCWGG 2 cut(s) 570, 1136
BstNSI RCATGY 2 cut(s) 20, 226
BstPAI GACNNNNGTC 1 cut(s) 299
BstSCI CCNGG 7 cut(s) 260, 490, 568, 880, 881, 892, 1134
BstSLI GKGCMC 3 cut(s) 1059, 1214, 1307
BstUI CGCG 4 cut(s) 23, 395, 637, 639
BstV1I GCAGC 9 cut(s) 37, 129, 155, 514, 523, 546, 1124, 1219, 1222
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 2 cut(s) 1223, 1400
BstXI CCANNNNNNTGG 1 cut(s) 935
BstYI RGATCY 2 cut(s) 1223, 1400
BstZ17I GTATAC 1 cut(s) 1030
BstZI CGGCCG 2 cut(s) 247, 396
BsuI GTATCC 1 cut(s) 1110
BsuRI GGCC 4 cut(s) 249, 398, 573, 1212
BtgI CCRYGG 3 cut(s) 21, 250, 1269
BtgZI GCGATG 2 cut(s) 94, 182
BtsCI GGATG 5 cut(s) 393, 424, 805, 945, 1004
BtsI GCAGTG 2 cut(s) 522, 1066
BtsIMutI CAGTG 6 cut(s) 522, 796, 1035, 1066, 1119, 1295
Cac8I GCNNGC 3 cut(s) 18, 115, 400
CaiI CAGNNNCTG 1 cut(s) 575
CfoI GCGC 4 cut(s) 395, 559, 639, 863
Cfr10I RCCGGY 1 cut(s) 398
Cfr13I GGNCC 3 cut(s) 572, 1210, 1211
Cfr42I CCGCGG 1 cut(s) 24
Cfr9I CCCGGG 1 cut(s) 881
CseI GACGC 1 cut(s) 317
CviAII CATG 9 cut(s) 17, 223, 469, 740, 812, 972, 1255, 1270, 1334
DdeI CTNAG 2 cut(s) 788, 1182
DpnI GATC 7 cut(s) 405, 457, 620, 1011, 1064, 1225, 1402
DpnII GATC 7 cut(s) 403, 455, 618, 1009, 1062, 1223, 1400
DrdI GACNNNNNNGTC 1 cut(s) 1130
DriI GACNNNNNGTC 1 cut(s) 851
DseDI GACNNNNNNGTC 1 cut(s) 1130
EaeI YGGCCR 2 cut(s) 247, 396
EagI CGGCCG 2 cut(s) 247, 396
Eam1104I CTCTTC 4 cut(s) 695, 705, 870, 1268
Eam1105I GACNNNNNGTC 1 cut(s) 851
EarI CTCTTC 4 cut(s) 695, 705, 870, 1268
Ecl136II GAGCTC 1 cut(s) 1261
EclXI CGGCCG 2 cut(s) 247, 396
Eco130I CCWWGG 3 cut(s) 1144, 1269, 1311
Eco24I GRGCYC 2 cut(s) 1214, 1263
Eco52I CGGCCG 2 cut(s) 247, 396
Eco53kI GAGCTC 1 cut(s) 1261
Eco57I CTGAAG 1 cut(s) 1380
Eco72I CACGTG 1 cut(s) 1060
Eco88I CYCGRG 1 cut(s) 881
EcoICRI GAGCTC 1 cut(s) 1261
EcoNI CCTNNNNNAGG 1 cut(s) 567
EcoO109I RGGNCCY 3 cut(s) 572, 1210, 1211
EcoRI GAATTC 1 cut(s) 1082
EcoRII CCWGG 2 cut(s) 568, 1134
EcoT14I CCWWGG 3 cut(s) 1144, 1269, 1311
EcoT38I GRGCYC 2 cut(s) 1214, 1263
ErhI CCWWGG 3 cut(s) 1144, 1269, 1311
FaeI CATG 9 cut(s) 20, 226, 472, 743, 815, 975, 1258, 1273, 1337
FalI AAGNNNNNCTT 2 cut(s) 1016, 1048
FatI CATG 9 cut(s) 16, 222, 468, 739, 811, 971, 1254, 1269, 1333
FauI CCCGC 3 cut(s) 606, 1180, 1413
FblI GTMKAC 2 cut(s) 227, 1029
FokI GGATG 5 cut(s) 400, 431, 812, 952, 1011
FriOI GRGCYC 2 cut(s) 1214, 1263
FspBI CTAG 1 cut(s) 1109
GlaI GCGC 4 cut(s) 394, 558, 638, 862
GsaI CCCAGC 2 cut(s) 283, 442
GsuI CTGGAG 1 cut(s) 1361
HaeII RGCGCY 1 cut(s) 864
HaeIII GGCC 4 cut(s) 249, 398, 573, 1212
HapII CCGG 7 cut(s) 231, 261, 399, 428, 491, 882, 893
HgaI GACGC 1 cut(s) 317
HhaI GCGC 4 cut(s) 395, 559, 639, 863
Hin1I GRCGYC 1 cut(s) 309
Hin1II CATG 9 cut(s) 20, 226, 472, 743, 815, 975, 1258, 1273, 1337
Hin6I GCGC 4 cut(s) 393, 557, 637, 861
HinP1I GCGC 4 cut(s) 393, 557, 637, 861
HincII GTYRAC 2 cut(s) 228, 1141
HindII GTYRAC 2 cut(s) 228, 1141
HindIII AAGCTT 2 cut(s) 191, 606
HpaII CCGG 7 cut(s) 231, 261, 399, 428, 491, 882, 893
HphI GGTGA 2 cut(s) 295, 656
Hpy166II GTNNAC 6 cut(s) 104, 228, 1030, 1057, 1141, 1305
Hpy188III TCNNGA 6 cut(s) 316, 330, 375, 616, 622, 932
Hpy8I GTNNAC 6 cut(s) 104, 228, 1030, 1057, 1141, 1305
Hpy99I CGWCG 6 cut(s) 151, 154, 298, 311, 317, 857
HpyAV CCTTC 4 cut(s) 604, 668, 1018, 1168
HpyCH4III ACNGT 4 cut(s) 154, 1039, 1132, 1414
HpyCH4IV ACGT 2 cut(s) 296, 1059
HpyCH4V TGCA 7 cut(s) 32, 175, 422, 472, 1057, 1238, 1305
HpyF10VI GCNNNNNNNGC 8 cut(s) 29, 123, 399, 533, 536, 565, 918, 1209
HpyF3I CTNAG 2 cut(s) 788, 1182
HpySE526I ACGT 2 cut(s) 296, 1059
Hsp92I GRCGYC 1 cut(s) 309
Hsp92II CATG 9 cut(s) 20, 226, 472, 743, 815, 975, 1258, 1273, 1337
HspAI GCGC 4 cut(s) 393, 557, 637, 861
KroI GCCGGC 1 cut(s) 398
KroNI GCCGGC 1 cut(s) 400
KspI CCGCGG 1 cut(s) 24
Kzo9I GATC 7 cut(s) 403, 455, 618, 1009, 1062, 1223, 1400
LguI GCTCTTC 3 cut(s) 695, 870, 1268
LmnI GCTCC 2 cut(s) 917, 1258
Lsp1109I GCAGC 9 cut(s) 37, 129, 155, 514, 523, 546, 1124, 1219, 1222
LweI GCATC 2 cut(s) 409, 909
MaeI CTAG 1 cut(s) 1109
MaeII ACGT 2 cut(s) 296, 1059
MaeIII GTNAC 3 cut(s) 89, 301, 327
MalI GATC 7 cut(s) 405, 457, 620, 1011, 1064, 1225, 1402
MbiI CCGCTC 1 cut(s) 871
MboI GATC 7 cut(s) 403, 455, 618, 1009, 1062, 1223, 1400
MboII GAAGA 9 cut(s) 348, 694, 712, 722, 780, 857, 1255, 1259, 1410
MflI RGATCY 2 cut(s) 1223, 1400
MhlI GDGCHC 4 cut(s) 1059, 1214, 1263, 1307
MluCI AATT 8 cut(s) 85, 346, 511, 589, 689, 771, 1082, 1278
MlyI GAGTC 5 cut(s) 477, 640, 664, 840, 1277
MmeI TCCRAC 3 cut(s) 317, 823, 1127
MnlI CCTC 9 cut(s) 550, 573, 769, 1072, 1104, 1179, 1224, 1237, 1345
MroNI GCCGGC 1 cut(s) 398
MroXI GAANNNNTTC 1 cut(s) 589
MseI TTAA 2 cut(s) 687, 795
MslI CAYNNNNRTG 1 cut(s) 933
MspA1I CMGCKG 5 cut(s) 23, 120, 271, 279, 1232
MspI CCGG 7 cut(s) 231, 261, 399, 428, 491, 882, 893
MspR9I CCNGG 7 cut(s) 262, 492, 570, 882, 883, 894, 1136
Mva1269I GAATGC 1 cut(s) 1238
MvaI CCWGG 2 cut(s) 570, 1136
MvnI CGCG 4 cut(s) 23, 395, 637, 639
MwoI GCNNNNNNNGC 8 cut(s) 29, 123, 399, 533, 536, 565, 918, 1209
NaeI GCCGGC 1 cut(s) 400
NciI CCSGG 5 cut(s) 262, 492, 882, 883, 894
NcoI CCATGG 1 cut(s) 1269
NdeII GATC 7 cut(s) 403, 455, 618, 1009, 1062, 1223, 1400
NgoMIV GCCGGC 1 cut(s) 398
NlaIII CATG 9 cut(s) 20, 226, 472, 743, 815, 975, 1258, 1273, 1337
NlaIV GGNNCC 3 cut(s) 913, 1211, 1212
NmuCI GTSAC 2 cut(s) 301, 327
NspI RCATGY 2 cut(s) 20, 226
PaeI GCATGC 1 cut(s) 20
PciSI GCTCTTC 3 cut(s) 695, 870, 1268
PcsI WCGNNNNNNNCGW 2 cut(s) 143, 371
PctI GAATGC 1 cut(s) 1238
PdiI GCCGGC 1 cut(s) 400
PdmI GAANNNNTTC 1 cut(s) 589
PfeI GAWTC 9 cut(s) 184, 333, 694, 715, 728, 906, 956, 1043, 1355
PflFI GACNNNGTC 2 cut(s) 311, 370
PflMI CCANNNNNTGG 1 cut(s) 1339
PfoI TCCNGGA 2 cut(s) 260, 892
PleI GAGTC 5 cut(s) 477, 639, 663, 840, 1277
PmaCI CACGTG 1 cut(s) 1060
PmlI CACGTG 1 cut(s) 1060
PpsI GAGTC 5 cut(s) 477, 639, 663, 840, 1277
Ppu21I YACGTR 1 cut(s) 1060
PshAI GACNNNNGTC 1 cut(s) 299
Psp124BI GAGCTC 1 cut(s) 1263
Psp6I CCWGG 2 cut(s) 568, 1134
PspCI CACGTG 1 cut(s) 1060
PspFI CCCAGC 2 cut(s) 279, 438
PspGI CCWGG 2 cut(s) 568, 1134
PspN4I GGNNCC 3 cut(s) 913, 1211, 1212
PspOMI GGGCCC 1 cut(s) 1210
PspPI GGNCC 3 cut(s) 572, 1210, 1211
PstNI CAGNNNCTG 1 cut(s) 575
PsuI RGATCY 2 cut(s) 1223, 1400
PsyI GACNNNGTC 2 cut(s) 311, 370
PvuII CAGCTG 1 cut(s) 279
RseI CAYNNNNRTG 1 cut(s) 933
SacI GAGCTC 1 cut(s) 1263
SacII CCGCGG 1 cut(s) 24
SalI GTCGAC 1 cut(s) 226
SapI GCTCTTC 3 cut(s) 695, 870, 1268
SaqAI TTAA 2 cut(s) 687, 795
Sau3AI GATC 7 cut(s) 403, 455, 618, 1009, 1062, 1223, 1400
Sau96I GGNCC 3 cut(s) 572, 1210, 1211
SchI GAGTC 5 cut(s) 477, 640, 664, 840, 1277
ScrFI CCNGG 7 cut(s) 262, 492, 570, 882, 883, 894, 1136
SduI GDGCHC 4 cut(s) 1059, 1214, 1263, 1307
SfaNI GCATC 2 cut(s) 409, 909
Sfr303I CCGCGG 1 cut(s) 24
SgrBI CCGCGG 1 cut(s) 24
SmaI CCCGGG 1 cut(s) 883
SmiMI CAYNNNNRTG 1 cut(s) 933
SphI GCATGC 1 cut(s) 20
Sse9I AATT 8 cut(s) 85, 346, 511, 589, 689, 771, 1082, 1278
SspMI CTAG 1 cut(s) 1109
SstI GAGCTC 1 cut(s) 1263
StyD4I CCNGG 7 cut(s) 260, 490, 568, 880, 881, 892, 1134
StyI CCWWGG 3 cut(s) 1144, 1269, 1311
TaaI ACNGT 4 cut(s) 154, 1039, 1132, 1414
TaiI ACGT 2 cut(s) 299, 1062
TaqI TCGA 9 cut(s) 227, 315, 365, 374, 481, 497, 615, 662, 933
TasI AATT 8 cut(s) 85, 346, 511, 589, 689, 771, 1082, 1278
TauI GCSGC 7 cut(s) 23, 26, 143, 271, 398, 642, 861
TfiI GAWTC 9 cut(s) 184, 333, 694, 715, 728, 906, 956, 1043, 1355
Tru1I TTAA 2 cut(s) 687, 795
Tru9I TTAA 2 cut(s) 687, 795
TscAI CASTG 6 cut(s) 529, 796, 1042, 1073, 1126, 1295
TseFI GTSAC 2 cut(s) 301, 327
TseI GCWGC 9 cut(s) 50, 117, 143, 527, 536, 559, 1112, 1232, 1235
Tsp45I GTSAC 2 cut(s) 301, 327
TspGWI ACGGA 1 cut(s) 841
TspMI CCCGGG 1 cut(s) 881
TspRI CASTG 6 cut(s) 529, 796, 1042, 1073, 1126, 1295
Tth111I GACNNNGTC 2 cut(s) 311, 370
Van91I CCANNNNNTGG 1 cut(s) 1339
VneI GTGCAC 2 cut(s) 1055, 1303
XagI CCTNNNNNAGG 1 cut(s) 567
XapI RAATTY 2 cut(s) 511, 1082
XceI RCATGY 2 cut(s) 20, 226
XmaI CCCGGG 1 cut(s) 881
XmiI GTMKAC 2 cut(s) 227, 1029
XmnI GAANNNNTTC 1 cut(s) 589
XspI CTAG 1 cut(s) 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.