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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD08G1122100.v1.1 |
| rosa_laevigata | RLG00000020540 |
| rosa_multiflora | Rmu_sc0001102.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00096540 Rroxscaffold_2G00096580 |
| rosa_samantha | Rh2BG498000 Rh2BG498400 Rh2DG508900 Rh2DG509200 |
| rosa_wichuraiana | Rw2G039820 Rw2G040250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 183 |
| AciI | CCGC | 5 cut(s) | 87, 183, 189, 243, 267 |
| AcoI | YGGCCR | 1 cut(s) | 240 |
| AgsI | TTSAA | 2 cut(s) | 34, 101 |
| Alw26I | GTCTC | 1 cut(s) | 107 |
| AoxI | GGCC | 1 cut(s) | 240 |
| BanII | GRGCYC | 1 cut(s) | 134 |
| BccI | CCATC | 3 cut(s) | 7, 166, 248 |
| BcoDI | GTCTC | 1 cut(s) | 107 |
| BfaI | CTAG | 2 cut(s) | 150, 177 |
| BisI | GCNGC | 3 cut(s) | 88, 190, 243 |
| BlsI | GCNGC | 3 cut(s) | 89, 191, 244 |
| BmsI | GCATC | 1 cut(s) | 46 |
| BsaJI | CCNNGG | 1 cut(s) | 55 |
| Bse1I | ACTGG | 1 cut(s) | 268 |
| BseDI | CCNNGG | 1 cut(s) | 55 |
| BseGI | GGATG | 2 cut(s) | 37, 177 |
| BseNI | ACTGG | 1 cut(s) | 268 |
| BseRI | GAGGAG | 1 cut(s) | 20 |
| Bsh1236I | CGCG | 1 cut(s) | 183 |
| BshFI | GGCC | 1 cut(s) | 242 |
| BsmAI | GTCTC | 1 cut(s) | 107 |
| BsnI | GGCC | 1 cut(s) | 242 |
| Bsp1286I | GDGCHC | 1 cut(s) | 134 |
| Bsp143I | GATC | 1 cut(s) | 108 |
| BspACI | CCGC | 5 cut(s) | 87, 183, 189, 243, 267 |
| BspANI | GGCC | 1 cut(s) | 242 |
| BspFNI | CGCG | 1 cut(s) | 183 |
| BsrI | ACTGG | 1 cut(s) | 268 |
| BssECI | CCNNGG | 1 cut(s) | 55 |
| BssMI | GATC | 1 cut(s) | 108 |
| BssT1I | CCWWGG | 1 cut(s) | 55 |
| BstF5I | GGATG | 2 cut(s) | 37, 177 |
| BstFNI | CGCG | 1 cut(s) | 183 |
| BstKTI | GATC | 1 cut(s) | 111 |
| BstMAI | GTCTC | 1 cut(s) | 107 |
| BstMBI | GATC | 1 cut(s) | 108 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 155, 189 |
| BstUI | CGCG | 1 cut(s) | 183 |
| BsuRI | GGCC | 1 cut(s) | 242 |
| BtsCI | GGATG | 2 cut(s) | 37, 177 |
| BtsIMutI | CAGTG | 1 cut(s) | 261 |
| CseI | GACGC | 1 cut(s) | 189 |
| CviJI | RGCY | 4 cut(s) | 60, 132, 176, 242 |
| CviKI_1 | RGCY | 4 cut(s) | 60, 132, 176, 242 |
| DpnI | GATC | 1 cut(s) | 110 |
| DpnII | GATC | 1 cut(s) | 108 |
| EaeI | YGGCCR | 1 cut(s) | 240 |
| EciI | GGCGGA | 1 cut(s) | 282 |
| Eco130I | CCWWGG | 1 cut(s) | 55 |
| Eco24I | GRGCYC | 1 cut(s) | 134 |
| EcoT14I | CCWWGG | 1 cut(s) | 55 |
| EcoT38I | GRGCYC | 1 cut(s) | 134 |
| ErhI | CCWWGG | 1 cut(s) | 55 |
| FaiI | YATR | 7 cut(s) | 44, 49, 69, 128, 160, 162, 200 |
| FauNDI | CATATG | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 3 cut(s) | 88, 190, 243 |
| FokI | GGATG | 2 cut(s) | 24, 184 |
| FriOI | GRGCYC | 1 cut(s) | 134 |
| Fsp4HI | GCNGC | 3 cut(s) | 88, 190, 243 |
| FspBI | CTAG | 2 cut(s) | 150, 177 |
| GluI | GCNGC | 3 cut(s) | 88, 190, 243 |
| HaeIII | GGCC | 1 cut(s) | 242 |
| HgaI | GACGC | 1 cut(s) | 189 |
| Hpy188III | TCNNGA | 2 cut(s) | 81, 112 |
| Hpy99I | CGWCG | 1 cut(s) | 209 |
| HpyAV | CCTTC | 1 cut(s) | 161 |
| HpyCH4IV | ACGT | 1 cut(s) | 207 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 155, 189 |
| HpySE526I | ACGT | 1 cut(s) | 207 |
| Kzo9I | GATC | 1 cut(s) | 108 |
| LpnPI | CCDG | 2 cut(s) | 120, 249 |
| LweI | GCATC | 1 cut(s) | 46 |
| MaeI | CTAG | 2 cut(s) | 150, 177 |
| MaeII | ACGT | 1 cut(s) | 207 |
| MaeIII | GTNAC | 1 cut(s) | 257 |
| MalI | GATC | 1 cut(s) | 110 |
| MboI | GATC | 1 cut(s) | 108 |
| MboII | GAAGA | 3 cut(s) | 22, 176, 263 |
| MhlI | GDGCHC | 1 cut(s) | 134 |
| MluCI | AATT | 2 cut(s) | 18, 272 |
| MnlI | CCTC | 2 cut(s) | 86, 208 |
| MseI | TTAA | 1 cut(s) | 236 |
| MvnI | CGCG | 1 cut(s) | 183 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 155, 189 |
| NdeI | CATATG | 1 cut(s) | 160 |
| NdeII | GATC | 1 cut(s) | 108 |
| PkrI | GCNGC | 3 cut(s) | 89, 191, 244 |
| SaqAI | TTAA | 1 cut(s) | 236 |
| SatI | GCNGC | 3 cut(s) | 88, 190, 243 |
| Sau3AI | GATC | 1 cut(s) | 108 |
| SduI | GDGCHC | 1 cut(s) | 134 |
| SetI | ASST | 1 cut(s) | 210 |
| SfaNI | GCATC | 1 cut(s) | 46 |
| Sse9I | AATT | 2 cut(s) | 18, 272 |
| SsiI | CCGC | 5 cut(s) | 87, 183, 189, 243, 267 |
| SspMI | CTAG | 2 cut(s) | 150, 177 |
| StyI | CCWWGG | 1 cut(s) | 55 |
| TaiI | ACGT | 1 cut(s) | 210 |
| TaqI | TCGA | 2 cut(s) | 80, 111 |
| TasI | AATT | 2 cut(s) | 18, 272 |
| TauI | GCSGC | 3 cut(s) | 90, 192, 245 |
| Tru1I | TTAA | 1 cut(s) | 236 |
| Tru9I | TTAA | 1 cut(s) | 236 |
| TscAI | CASTG | 1 cut(s) | 268 |
| TspDTI | ATGAA | 1 cut(s) | 177 |
| TspRI | CASTG | 1 cut(s) | 268 |
| XspI | CTAG | 2 cut(s) | 150, 177 |