Rh2BG498400

OST-HTH/LOTUS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0018108
Physical Location & Seq
Forward (+)
70395373 .. 70399531
4159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG498400.1

Sequence Viewer

Length: 1659 bp
ATGGAGCTCTCCGAGTCACATTCTTCCATTAATTTAAAAGTGGCCAATGACCTCCGAAACTCTGACATTTCAGAGAGAATCGAGTCGGCCGGAGCGAGCAGAGACAGCAGTGAACAGCTCTTGCCTCAGCTGAAACTCCGGTCATCTTCGCCGGAATCCTTGGGCGGAGCTGCGGCGGAGTGCGCCACGGCACTGCTACCCACTGACCGCGCAAGGTTGGGTGTAAAGTTGAATCCAGATGTTGACTCCGTTGAAGACTCGGTCATCCTCATGGAAGAAAAGGACTTGACCTTCGGAGCAAACAGTGAAATCATCAATCTACGAAGAGAAAGAGCTATAGACCTGGGATCATGTGAAGATATGCGTTACATATTGCCTAACCATACCAGTCTCACTAACCAAGTTTACCTCAATCCACAAAAATGTTCTGCTTTAGGGTTGACAAATGAAGGCACCACTACTGAAAGGAATGCTAGTATTTCAAGCCCCACGGAAGAGGGCTCTCATCGAGGATGTTTAAGAGGAGCCAAGTGCTTCTATGCACATTGTGAAGAGGAGTCTTGGAAAGTGAAGCACAGAAAACATTGGAGTAATTTTTCTGCTGCTAAACAACTCAAAAGCAAAATCTCTGTAGGAGGACTTCCTCCTTCAGTGGACTCCGATATTTTGGACAAAACCAAAGGTACTACCAATGTTGTAGCGAGTTTAGAGAATGAAAAGAAAATCATCCTTGGAAGTGACTCCAGATTGACCTACGAAGGAACTATAAGAACAGATGTGCAAAAAAAATTTGAACAGATAACTTCAAATGGCTATATCATAGCCACAATGGTTGGAAGTGCCGGCGGATGCGAAAAGATTTGGAAACGCATGCAAGAATACTGTAGTTCCCAAGGAGCTGAGCCAAAGACGATTTCTTCCATATCCAAATATGGATGCGAGATACCTAGGAAAGTTGATGATTTTCTATCGTCTGAATGTTTTGTCATCGGGGTTGAAAATGAAAAACCAACCGTATATCATCTTATAGACTTGTATGATGAAAAATTTAAAAAGCGTGTAAAGGATTCAAAGAAAGTTTTTGATACTTTTGCTGCACTAGGATCTGGGAGTAACATTGCTCTCCGTGTATGCAATGAAGTATTGAAGGGACGTAGCCCTCACGTAGAGGAACTATTTGAAACAGTCACATTCGGACTACTTAACGCAGCATTGTACAATCCCGATACTGGCGGAATATTACGAGTGATACAGTTATGCTCAACTGGAATTGAGATAGAGTCAAACAAAACTGTTGTTGAACTTTATCTACAATTCTATGATCGCTTTCAGGAGTTGGAGAATAGATCATTTTTTCTATTTTACATTCCGAATATTAAGAAAAATGATCTACGCCAATGGCTTCGGCAATCAGGAACCATAGAGGATTTTGGTCATCCATTGACACAAGTTTGCGGGAGTTATTATGTGCACCGCGTTTTATTCAAGGACCATGTGGCTTCCACACATCTAGGAGCAAAACCTATTCCTAAGTCGAAGTGGCCTGAGTTTACTGATTCACCAAGTGCGTTAAGGTTCATTATTATTGCAAGCAAGAAAGTGTTTGTTGCAAGACAATCAGCAAAACTTTTGAGCTCACTGAAACTTGTAGATCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

552

Amino Acids

61.48

Weight (kDa)

7.16

Isoelectric Point (pI)

47.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018108)

Species Orthologous Gene IDs
malus_domestica MD08G1122100.v1.1
rosa_laevigata RLG00000020540
rosa_multiflora Rmu_sc0001102.1_g000001
rosa_roxburghii Rroxscaffold_2G00096540 Rroxscaffold_2G00096580
rosa_samantha Rh2BG498000 Rh2BG498400 Rh2DG508900 Rh2DG509200
rosa_wichuraiana Rw2G039820 Rw2G040250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 452
AccII CGCG 2 cut(s) 210, 1476
AciI CCGC 8 cut(s) 165, 173, 176, 208, 846, 1233, 1455, 1474
AclWI GGATC 2 cut(s) 355, 1111
AcoI YGGCCR 2 cut(s) 42, 87
AcsI RAATTY 2 cut(s) 788, 1046
AcuI CTGAAG 1 cut(s) 633
AdeI CACNNNGTG 2 cut(s) 548, 1565
AfaI GTAC 2 cut(s) 685, 1217
AfiI CCNNNNNNNGG 1 cut(s) 1229
AjnI CCWGG 1 cut(s) 342
AjuI GAANNNNNNNTTGG 2 cut(s) 898, 930
AluBI AGCT 7 cut(s) 7, 118, 130, 170, 335, 899, 1635
AluI AGCT 7 cut(s) 7, 118, 130, 170, 335, 899, 1635
Alw21I GWGCWC 3 cut(s) 9, 1473, 1637
Alw26I GTCTC 2 cut(s) 96, 395
Alw44I GTGCAC 1 cut(s) 1469
AlwI GGATC 2 cut(s) 355, 1111
AoxI GGCC 3 cut(s) 42, 87, 1541
ApaLI GTGCAC 1 cut(s) 1469
ApeKI GCWGC 4 cut(s) 170, 602, 1094, 1208
ApoI RAATTY 2 cut(s) 788, 1046
ArsI GACNNNNNNTTYG 2 cut(s) 275, 307
AseI ATTAAT 1 cut(s) 30
AspA2I CCTAGG 1 cut(s) 947
AspLEI GCGC 2 cut(s) 185, 212
AspS9I GGNCC 1 cut(s) 1489
AsuHPI GGTGA 1 cut(s) 1551
AvaII GGWCC 1 cut(s) 1489
AvrII CCTAGG 1 cut(s) 947
BaeGI GKGCMC 1 cut(s) 1473
BalI TGGCCA 1 cut(s) 44
BanI GGYRCC 1 cut(s) 452
BanII GRGCYC 3 cut(s) 9, 503, 1637
BarI GAAGNNNNNNTAC 2 cut(s) 624, 656
BbsI GAAGAC 1 cut(s) 261
Bbv12I GWGCWC 3 cut(s) 9, 1473, 1637
BbvCI CCTCAGC 1 cut(s) 126
BbvI GCAGC 4 cut(s) 157, 589, 1081, 1220
BceAI ACGGC 1 cut(s) 204
BciT130I CCWGG 1 cut(s) 344
BcoDI GTCTC 2 cut(s) 96, 395
BfaI CTAG 4 cut(s) 474, 948, 1100, 1511
BfmI CTRYAG 4 cut(s) 336, 630, 883, 1655
BglII AGATCT 1 cut(s) 1651
BisI GCNGC 5 cut(s) 171, 174, 603, 1095, 1209
BlnI CCTAGG 1 cut(s) 947
BlpI GCTNAGC 1 cut(s) 900
BlsI GCNGC 5 cut(s) 172, 175, 604, 1096, 1210
Bme1390I CCNGG 1 cut(s) 344
Bme18I GGWCC 1 cut(s) 1489
BmgT120I GGNCC 1 cut(s) 1489
BmiI GGNNCC 3 cut(s) 454, 526, 1417
BmrFI CCNGG 1 cut(s) 344
BmsI GCATC 2 cut(s) 839, 926
BpiI GAAGAC 1 cut(s) 261
BpmI CTGGAG 1 cut(s) 727
Bpu10I CCTNAGC 1 cut(s) 126
Bpu1102I GCTNAGC 1 cut(s) 900
BsaAI YACGTR 1 cut(s) 1165
BsaJI CCNNGG 7 cut(s) 159, 186, 343, 489, 730, 892, 947
BsaWI WCCGGW 1 cut(s) 138
Bsc4I CCNNNNNNNGG 1 cut(s) 1229
Bse118I RCCGGY 1 cut(s) 842
Bse1I ACTGG 3 cut(s) 387, 1234, 1270
Bse3DI GCAATG 2 cut(s) 1116, 1141
BseBI CCWGG 1 cut(s) 344
BseDI CCNNGG 7 cut(s) 159, 186, 343, 489, 730, 892, 947
BseGI GGATG 6 cut(s) 264, 518, 726, 854, 941, 1435
BseLI CCNNNNNNNGG 1 cut(s) 1229
BseMI GCAATG 2 cut(s) 1116, 1141
BseMII CTCAG 3 cut(s) 140, 891, 1536
BseNI ACTGG 3 cut(s) 387, 1234, 1270
BseRI GAGGAG 2 cut(s) 537, 569
BseSI GKGCMC 1 cut(s) 1473
BseX3I CGGCCG 1 cut(s) 87
BseXI GCAGC 4 cut(s) 157, 589, 1081, 1220
BsgI GTGCAG 1 cut(s) 1080
Bsh1236I CGCG 2 cut(s) 210, 1476
Bsh1285I CGRYCG 1 cut(s) 90
BshFI GGCC 3 cut(s) 44, 89, 1543
BshNI GGYRCC 1 cut(s) 452
BsiEI CGRYCG 1 cut(s) 90
BsiHKAI GWGCWC 3 cut(s) 9, 1473, 1637
BsiSI CCGG 4 cut(s) 90, 139, 152, 843
BslFI GGGAC 1 cut(s) 1164
BslI CCNNNNNNNGG 1 cut(s) 1229
BsmAI GTCTC 2 cut(s) 96, 395
BsmFI GGGAC 1 cut(s) 1164
BsmI GAATGC 1 cut(s) 475
BsnI GGCC 3 cut(s) 44, 89, 1543
Bsp1286I GDGCHC 4 cut(s) 9, 503, 1473, 1637
Bsp1407I TGTACA 1 cut(s) 1215
Bsp143I GATC 6 cut(s) 347, 1103, 1321, 1346, 1387, 1651
Bsp1720I GCTNAGC 1 cut(s) 900
BspACI CCGC 8 cut(s) 165, 173, 176, 208, 846, 1233, 1455, 1474
BspANI GGCC 3 cut(s) 44, 89, 1543
BspCNI CTCAG 3 cut(s) 139, 892, 1537
BspFNI CGCG 2 cut(s) 210, 1476
BspLI GGNNCC 3 cut(s) 454, 526, 1417
BspPI GGATC 2 cut(s) 355, 1111
BspT107I GGYRCC 1 cut(s) 452
BsrDI GCAATG 2 cut(s) 1116, 1141
BsrFI RCCGGY 1 cut(s) 842
BsrGI TGTACA 1 cut(s) 1215
BsrI ACTGG 3 cut(s) 387, 1234, 1270
BssAI RCCGGY 1 cut(s) 842
BssECI CCNNGG 7 cut(s) 159, 186, 343, 489, 730, 892, 947
BssMI GATC 6 cut(s) 347, 1103, 1321, 1346, 1387, 1651
BssT1I CCWWGG 4 cut(s) 159, 730, 892, 947
Bst2UI CCWGG 1 cut(s) 344
Bst4CI ACNGT 6 cut(s) 305, 884, 1015, 1186, 1254, 1294
Bst6I CTCTTC 3 cut(s) 319, 489, 546
BstAUI TGTACA 1 cut(s) 1215
BstBAI YACGTR 1 cut(s) 1165
BstC8I GCNNGC 4 cut(s) 97, 844, 872, 1591
BstDEI CTNAG 4 cut(s) 126, 900, 1530, 1545
BstDSI CCRYGG 2 cut(s) 186, 489
BstF5I GGATG 6 cut(s) 264, 518, 726, 854, 941, 1435
BstFNI CGCG 2 cut(s) 210, 1476
BstHHI GCGC 2 cut(s) 185, 212
BstKTI GATC 6 cut(s) 350, 1106, 1324, 1349, 1390, 1654
BstMAI GTCTC 2 cut(s) 96, 395
BstMBI GATC 6 cut(s) 347, 1103, 1321, 1346, 1387, 1651
BstMCI CGRYCG 1 cut(s) 90
BstMWI GCNNNNNNNGC 2 cut(s) 105, 182
BstNI CCWGG 1 cut(s) 344
BstNSI RCATGY 1 cut(s) 874
BstSCI CCNGG 1 cut(s) 342
BstSFI CTRYAG 4 cut(s) 336, 630, 883, 1655
BstSLI GKGCMC 1 cut(s) 1473
BstUI CGCG 2 cut(s) 210, 1476
BstV1I GCAGC 4 cut(s) 157, 589, 1081, 1220
BstV2I GAAGAC 1 cut(s) 261
BstX2I RGATCY 2 cut(s) 1103, 1651
BstYI RGATCY 2 cut(s) 1103, 1651
BstZI CGGCCG 1 cut(s) 87
BsuRI GGCC 3 cut(s) 44, 89, 1543
BtgI CCRYGG 2 cut(s) 186, 489
BtsCI GGATG 6 cut(s) 264, 518, 726, 854, 941, 1435
BtsI GCAGTG 2 cut(s) 115, 191
BtsIMutI CAGTG 6 cut(s) 115, 191, 201, 310, 657, 1637
Cac8I GCNNGC 4 cut(s) 97, 844, 872, 1591
CfoI GCGC 2 cut(s) 185, 212
Cfr10I RCCGGY 1 cut(s) 842
Cfr13I GGNCC 1 cut(s) 1489
Csp6I GTAC 2 cut(s) 684, 1216
CspCI CAANNNNNGTGG 2 cut(s) 814, 849
CviAII CATG 4 cut(s) 271, 351, 871, 1493
CviQI GTAC 2 cut(s) 684, 1216
DdeI CTNAG 4 cut(s) 126, 900, 1530, 1545
DpnI GATC 6 cut(s) 349, 1105, 1323, 1348, 1389, 1653
DpnII GATC 6 cut(s) 347, 1103, 1321, 1346, 1387, 1651
DraI TTTAAA 2 cut(s) 36, 1051
DraIII CACNNNGTG 2 cut(s) 548, 1565
EaeI YGGCCR 2 cut(s) 42, 87
EagI CGGCCG 1 cut(s) 87
Eam1104I CTCTTC 3 cut(s) 319, 489, 546
EarI CTCTTC 3 cut(s) 319, 489, 546
EciI GGCGGA 4 cut(s) 180, 191, 861, 1248
Ecl136II GAGCTC 2 cut(s) 7, 1635
EclXI CGGCCG 1 cut(s) 87
Eco130I CCWWGG 4 cut(s) 159, 730, 892, 947
Eco24I GRGCYC 3 cut(s) 9, 503, 1637
Eco47I GGWCC 1 cut(s) 1489
Eco52I CGGCCG 1 cut(s) 87
Eco53kI GAGCTC 2 cut(s) 7, 1635
Eco57I CTGAAG 1 cut(s) 633
EcoICRI GAGCTC 2 cut(s) 7, 1635
EcoRII CCWGG 1 cut(s) 342
EcoT14I CCWWGG 4 cut(s) 159, 730, 892, 947
EcoT38I GRGCYC 3 cut(s) 9, 503, 1637
ErhI CCWWGG 4 cut(s) 159, 730, 892, 947
FaeI CATG 4 cut(s) 274, 354, 874, 1496
FaqI GGGAC 1 cut(s) 1164
FatI CATG 4 cut(s) 270, 350, 870, 1492
FauI CCCGC 1 cut(s) 1448
Fnu4HI GCNGC 5 cut(s) 171, 174, 603, 1095, 1209
FokI GGATG 6 cut(s) 251, 525, 713, 861, 948, 1422
FriOI GRGCYC 3 cut(s) 9, 503, 1637
Fsp4HI GCNGC 5 cut(s) 171, 174, 603, 1095, 1209
FspBI CTAG 4 cut(s) 474, 948, 1100, 1511
GlaI GCGC 2 cut(s) 184, 211
GluI GCNGC 5 cut(s) 171, 174, 603, 1095, 1209
GsuI CTGGAG 1 cut(s) 727
HaeIII GGCC 3 cut(s) 44, 89, 1543
HapII CCGG 4 cut(s) 90, 139, 152, 843
HhaI GCGC 2 cut(s) 185, 212
Hin1II CATG 4 cut(s) 274, 354, 874, 1496
Hin6I GCGC 2 cut(s) 183, 210
HinP1I GCGC 2 cut(s) 183, 210
HincII GTYRAC 2 cut(s) 244, 441
HindII GTYRAC 2 cut(s) 244, 441
HpaII CCGG 4 cut(s) 90, 139, 152, 843
HphI GGTGA 1 cut(s) 1551
Hpy166II GTNNAC 7 cut(s) 113, 244, 406, 441, 655, 1471, 1551
Hpy188I TCNGA 9 cut(s) 13, 56, 64, 73, 296, 661, 976, 1196, 1371
Hpy188III TCNNGA 5 cut(s) 236, 744, 1223, 1331, 1413
Hpy8I GTNNAC 7 cut(s) 113, 244, 406, 441, 655, 1471, 1551
HpyAV CCTTC 5 cut(s) 301, 443, 657, 752, 1141
HpyCH4III ACNGT 6 cut(s) 305, 884, 1015, 1186, 1254, 1294
HpyCH4IV ACGT 2 cut(s) 1153, 1164
HpyCH4V TGCA 8 cut(s) 542, 781, 874, 1097, 1134, 1471, 1589, 1610
HpyF10VI GCNNNNNNNGC 2 cut(s) 105, 182
HpyF3I CTNAG 4 cut(s) 126, 900, 1530, 1545
HpySE526I ACGT 2 cut(s) 1153, 1164
Hsp92II CATG 4 cut(s) 274, 354, 874, 1496
HspAI GCGC 2 cut(s) 183, 210
KroI GCCGGC 1 cut(s) 842
KroNI GCCGGC 1 cut(s) 844
Kzo9I GATC 6 cut(s) 347, 1103, 1321, 1346, 1387, 1651
LmnI GCTCC 7 cut(s) 4, 92, 167, 296, 524, 896, 1514
Lsp1109I GCAGC 4 cut(s) 157, 589, 1081, 1220
LweI GCATC 2 cut(s) 839, 926
MaeI CTAG 4 cut(s) 474, 948, 1100, 1511
MaeII ACGT 2 cut(s) 1153, 1164
MaeIII GTNAC 5 cut(s) 15, 365, 737, 1112, 1186
MalI GATC 6 cut(s) 349, 1105, 1323, 1348, 1389, 1653
MboI GATC 6 cut(s) 347, 1103, 1321, 1346, 1387, 1651
MboII GAAGA 9 cut(s) 15, 138, 266, 287, 336, 368, 506, 563, 909
MflI RGATCY 2 cut(s) 1103, 1651
MhlI GDGCHC 4 cut(s) 9, 503, 1473, 1637
MlsI TGGCCA 1 cut(s) 44
MluCI AATT 6 cut(s) 31, 592, 788, 1046, 1269, 1313
MluNI TGGCCA 1 cut(s) 44
MlyI GAGTC 8 cut(s) 23, 92, 239, 251, 566, 650, 734, 1289
MmeI TCCRAC 2 cut(s) 814, 1317
Mox20I TGGCCA 1 cut(s) 44
MroNI GCCGGC 1 cut(s) 842
MscI TGGCCA 1 cut(s) 44
MseI TTAA 7 cut(s) 30, 35, 518, 1050, 1203, 1377, 1571
MslI CAYNNNNRTG 2 cut(s) 269, 421
Msp20I TGGCCA 1 cut(s) 44
MspA1I CMGCKG 1 cut(s) 130
MspI CCGG 4 cut(s) 90, 139, 152, 843
MspR9I CCNGG 1 cut(s) 344
Mva1269I GAATGC 1 cut(s) 475
MvaI CCWGG 1 cut(s) 344
MvnI CGCG 2 cut(s) 210, 1476
MwoI GCNNNNNNNGC 2 cut(s) 105, 182
NaeI GCCGGC 1 cut(s) 844
NdeII GATC 6 cut(s) 347, 1103, 1321, 1346, 1387, 1651
NgoMIV GCCGGC 1 cut(s) 842
NlaIII CATG 4 cut(s) 274, 354, 874, 1496
NlaIV GGNNCC 3 cut(s) 454, 526, 1417
NmuCI GTSAC 3 cut(s) 15, 737, 1186
NspI RCATGY 1 cut(s) 874
PaeI GCATGC 1 cut(s) 874
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PctI GAATGC 1 cut(s) 475
PdiI GCCGGC 1 cut(s) 844
PfeI GAWTC 5 cut(s) 78, 155, 232, 1067, 1556
PflFI GACNNNGTC 1 cut(s) 260
PkrI GCNGC 5 cut(s) 172, 175, 604, 1096, 1210
PleI GAGTC 8 cut(s) 22, 91, 239, 251, 565, 650, 734, 1288
PpsI GAGTC 8 cut(s) 22, 91, 239, 251, 565, 650, 734, 1288
Ppu21I YACGTR 1 cut(s) 1165
PshBI ATTAAT 1 cut(s) 30
Psp124BI GAGCTC 2 cut(s) 9, 1637
Psp6I CCWGG 1 cut(s) 342
PspGI CCWGG 1 cut(s) 342
PspN4I GGNNCC 3 cut(s) 454, 526, 1417
PspPI GGNCC 1 cut(s) 1489
PsrI GAACNNNNNNTAC 2 cut(s) 1293, 1325
PsuI RGATCY 2 cut(s) 1103, 1651
PsyI GACNNNGTC 1 cut(s) 260
PvuII CAGCTG 1 cut(s) 130
RsaI GTAC 2 cut(s) 685, 1217
RsaNI GTAC 2 cut(s) 684, 1216
RseI CAYNNNNRTG 2 cut(s) 269, 421
SacI GAGCTC 2 cut(s) 9, 1637
SaqAI TTAA 7 cut(s) 30, 35, 518, 1050, 1203, 1377, 1571
SatI GCNGC 5 cut(s) 171, 174, 603, 1095, 1209
Sau3AI GATC 6 cut(s) 347, 1103, 1321, 1346, 1387, 1651
Sau96I GGNCC 1 cut(s) 1489
SchI GAGTC 8 cut(s) 23, 92, 239, 251, 566, 650, 734, 1289
ScrFI CCNGG 1 cut(s) 344
SduI GDGCHC 4 cut(s) 9, 503, 1473, 1637
SfaNI GCATC 2 cut(s) 839, 926
SfcI CTRYAG 4 cut(s) 336, 630, 883, 1655
SinI GGWCC 1 cut(s) 1489
SmiMI CAYNNNNRTG 2 cut(s) 269, 421
SphI GCATGC 1 cut(s) 874
Sse9I AATT 6 cut(s) 31, 592, 788, 1046, 1269, 1313
SsiI CCGC 8 cut(s) 165, 173, 176, 208, 846, 1233, 1455, 1474
SspI AATATT 2 cut(s) 1239, 1375
SspMI CTAG 4 cut(s) 474, 948, 1100, 1511
SstI GAGCTC 2 cut(s) 9, 1637
StyD4I CCNGG 1 cut(s) 342
StyI CCWWGG 4 cut(s) 159, 730, 892, 947
TaaI ACNGT 6 cut(s) 305, 884, 1015, 1186, 1254, 1294
TaiI ACGT 2 cut(s) 1156, 1167
TaqI TCGA 3 cut(s) 81, 508, 1535
TaqII GACCGA 1 cut(s) 250
TasI AATT 6 cut(s) 31, 592, 788, 1046, 1269, 1313
TatI WGTACW 1 cut(s) 1215
TauI GCSGC 1 cut(s) 176
TfiI GAWTC 5 cut(s) 78, 155, 232, 1067, 1556
Tru1I TTAA 7 cut(s) 30, 35, 518, 1050, 1203, 1377, 1571
Tru9I TTAA 7 cut(s) 30, 35, 518, 1050, 1203, 1377, 1571
TscAI CASTG 6 cut(s) 115, 198, 208, 310, 657, 1644
TseFI GTSAC 3 cut(s) 15, 737, 1186
TseI GCWGC 4 cut(s) 170, 602, 1094, 1208
Tsp45I GTSAC 3 cut(s) 15, 737, 1186
TspDTI ATGAA 6 cut(s) 462, 729, 1017, 1056, 1152, 1567
TspGWI ACGGA 3 cut(s) 238, 506, 1115
TspRI CASTG 6 cut(s) 115, 198, 208, 310, 657, 1644
Tth111I GACNNNGTC 1 cut(s) 260
VneI GTGCAC 1 cut(s) 1469
VpaK11BI GGWCC 1 cut(s) 1489
VspI ATTAAT 1 cut(s) 30
XapI RAATTY 2 cut(s) 788, 1046
XceI RCATGY 1 cut(s) 874
XmaJI CCTAGG 1 cut(s) 947
XspI CTAG 4 cut(s) 474, 948, 1100, 1511
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.