Rmu_sc0001102.1_g000001

OST-HTH/LOTUS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001102.1
OG0018108
Physical Location & Seq
Forward (+)
662 .. 4545
3884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001102.1_g000001.1.cds

Sequence Viewer

Length: 1755 bp
atggagctctctgagtcacattcttccattaatttaaaagtggccaatgacctccgaaactctcacatttcagagagaatcgagtcggccggagcgagcagagacagcagtgaacagctcttgcctcagctcaaactccggtcatcttcgccggaatccttgggcggagctgaggcggagtgcgccacggcactgctacccactgaccgcgcaaggttgggtgtaaagttgaatccagatgttgactccgttgaagactcggtcatcctcatggaagaaaaggttaaagtttccttctttacagaagttttatctttgctgctgataccccaaaacggtgtgtcgtttactaaaaggtttgatgttcattgtatacaggacttgaccttcggagcaaacagtgaaatcatcaatctacgaagagaaagagctatagacctgggatcatgtgaagatatgcgttacatattgcctaaccataccagtctcactaaccaagtttacctcaatccacaaaaatgttctgctttagggttgacaaatgaaggcaccactactgaaaggaatgctagtatttcaagccccacggaagagggctctcatcaaggatgtttaagaggagccaagtgcttctatgcacattgtgaagaggagtcttggaaagtgaagcacagaaaacattggagtaatttttctgctgctaaacaactcaaaagcaaaatctctgtaggaggacttcctccttcagtggactccgatattttggacaaaaccaaaggtactaccaatgttgtagcgagtttagagaatgaaaagaaaatcatccttggaagtgactccagattgacctacgaaggaactataagaacagatgtgcaaaaaaaatttgaacagataacttcaaatggctatatcatagccacaatggttggaagtgccggcggatgcgaaaagatttggaaacgcatgcaagaatactgtagttcccaaggagctgagccaaagacgatttcttccatatccaaatatggatgcgagatacctaggaaagttgatgattttctatcgtctgaatgttttgtcatcggggttgaaaatgaaaaaccaaccgtatatcatcttatagacttgtatgatgaaaaatttaaaaagcgtgtaaaggattcaaagaaagtttttgatacttttgctgcactaggatctgggagtaacattgctctccgtgtatgcaatgaagtattgaagggacgtagccctcacgtagaggaactatttgaaacagtcacattcggactacttaacgcagcattgtacaatcccgatactggcggaatattacgagtgatacagttatgctcaactggaattgagatagagtcaaacaaaactgttgttgaactttatctacaattctatgatcgctttcaggagttggagaatagatcattttttctattttacattccgaatattaagaaaaatgatctacgccaatggcttcggcaatcaggaaccatagaggattttggtcatccattgacacaagtttgcggtcgttattatgtgcaccgcgttttattcaaggaccatgtggcttccacacatctaggagcaaaacctattcctaagtcgaagtggcctgagtttactgattcaccaagtgcgttaaggttcattattattgcaagcaagaaagtgtttgttgcaagacaatcagcaaaacttttgagctcactgaaacttgtagatctatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

584

Amino Acids

65.24

Weight (kDa)

7.53

Isoelectric Point (pI)

47.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018108)

Species Orthologous Gene IDs
malus_domestica MD08G1122100.v1.1
rosa_laevigata RLG00000020540
rosa_multiflora Rmu_sc0001102.1_g000001
rosa_roxburghii Rroxscaffold_2G00096540 Rroxscaffold_2G00096580
rosa_samantha Rh2BG498000 Rh2BG498400 Rh2DG508900 Rh2DG509200
rosa_wichuraiana Rw2G039820 Rw2G040250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 548
AccI GTMKAC 1 cut(s) 373
AccII CGCG 2 cut(s) 210, 1572
AciI CCGC 7 cut(s) 165, 176, 208, 942, 1329, 1551, 1570
AclWI GGATC 2 cut(s) 451, 1207
AcoI YGGCCR 2 cut(s) 42, 87
AcsI RAATTY 2 cut(s) 884, 1142
AcuI CTGAAG 1 cut(s) 729
AdeI CACNNNGTG 2 cut(s) 644, 1661
AfaI GTAC 2 cut(s) 781, 1313
AfiI CCNNNNNNNGG 2 cut(s) 335, 1325
AjnI CCWGG 1 cut(s) 438
AjuI GAANNNNNNNTTGG 2 cut(s) 994, 1026
AluBI AGCT 7 cut(s) 7, 118, 130, 170, 431, 995, 1731
AluI AGCT 7 cut(s) 7, 118, 130, 170, 431, 995, 1731
Alw21I GWGCWC 3 cut(s) 9, 1569, 1733
Alw26I GTCTC 2 cut(s) 96, 491
Alw44I GTGCAC 1 cut(s) 1565
AlwI GGATC 2 cut(s) 451, 1207
AoxI GGCC 3 cut(s) 42, 87, 1637
ApaLI GTGCAC 1 cut(s) 1565
ApeKI GCWGC 4 cut(s) 319, 698, 1190, 1304
ApoI RAATTY 2 cut(s) 884, 1142
ArsI GACNNNNNNTTYG 2 cut(s) 371, 403
AseI ATTAAT 1 cut(s) 30
AspA2I CCTAGG 1 cut(s) 1043
AspLEI GCGC 2 cut(s) 185, 212
AspS9I GGNCC 1 cut(s) 1585
AsuHPI GGTGA 1 cut(s) 1647
AvaII GGWCC 1 cut(s) 1585
AvrII CCTAGG 1 cut(s) 1043
BaeGI GKGCMC 1 cut(s) 1569
BalI TGGCCA 1 cut(s) 44
BanI GGYRCC 1 cut(s) 548
BanII GRGCYC 3 cut(s) 9, 599, 1733
BarI GAAGNNNNNNTAC 2 cut(s) 720, 752
BbsI GAAGAC 1 cut(s) 261
Bbv12I GWGCWC 3 cut(s) 9, 1569, 1733
BbvCI CCTCAGC 2 cut(s) 126, 171
BbvI GCAGC 4 cut(s) 306, 685, 1177, 1316
BceAI ACGGC 1 cut(s) 204
BciT130I CCWGG 1 cut(s) 440
BcoDI GTCTC 2 cut(s) 96, 491
BfaI CTAG 4 cut(s) 570, 1044, 1196, 1607
BfmI CTRYAG 4 cut(s) 432, 726, 979, 1751
BglII AGATCT 1 cut(s) 1747
BisI GCNGC 4 cut(s) 320, 699, 1191, 1305
BlnI CCTAGG 1 cut(s) 1043
BlpI GCTNAGC 1 cut(s) 996
BlsI GCNGC 4 cut(s) 321, 700, 1192, 1306
Bme1390I CCNGG 1 cut(s) 440
Bme18I GGWCC 1 cut(s) 1585
BmgT120I GGNCC 1 cut(s) 1585
BmiI GGNNCC 3 cut(s) 550, 622, 1513
BmrFI CCNGG 1 cut(s) 440
BmsI GCATC 2 cut(s) 935, 1022
BpiI GAAGAC 1 cut(s) 261
BpmI CTGGAG 1 cut(s) 823
Bpu10I CCTNAGC 2 cut(s) 126, 171
Bpu1102I GCTNAGC 1 cut(s) 996
BsaAI YACGTR 1 cut(s) 1261
BsaJI CCNNGG 7 cut(s) 159, 186, 439, 585, 826, 988, 1043
BsaWI WCCGGW 1 cut(s) 138
Bsc4I CCNNNNNNNGG 2 cut(s) 335, 1325
Bse118I RCCGGY 1 cut(s) 938
Bse1I ACTGG 3 cut(s) 483, 1330, 1366
Bse3DI GCAATG 2 cut(s) 1212, 1237
BseBI CCWGG 1 cut(s) 440
BseDI CCNNGG 7 cut(s) 159, 186, 439, 585, 826, 988, 1043
BseGI GGATG 6 cut(s) 264, 614, 822, 950, 1037, 1531
BseLI CCNNNNNNNGG 2 cut(s) 335, 1325
BseMI GCAATG 2 cut(s) 1212, 1237
BseMII CTCAG 4 cut(s) 140, 162, 987, 1632
BseNI ACTGG 3 cut(s) 483, 1330, 1366
BseRI GAGGAG 2 cut(s) 633, 665
BseSI GKGCMC 1 cut(s) 1569
BseX3I CGGCCG 1 cut(s) 87
BseXI GCAGC 4 cut(s) 306, 685, 1177, 1316
BsgI GTGCAG 1 cut(s) 1176
Bsh1236I CGCG 2 cut(s) 210, 1572
Bsh1285I CGRYCG 2 cut(s) 90, 1555
BshFI GGCC 3 cut(s) 44, 89, 1639
BshNI GGYRCC 1 cut(s) 548
BsiEI CGRYCG 2 cut(s) 90, 1555
BsiHKAI GWGCWC 3 cut(s) 9, 1569, 1733
BsiSI CCGG 4 cut(s) 90, 139, 152, 939
BslFI GGGAC 1 cut(s) 1260
BslI CCNNNNNNNGG 2 cut(s) 335, 1325
BsmAI GTCTC 2 cut(s) 96, 491
BsmFI GGGAC 1 cut(s) 1260
BsmI GAATGC 1 cut(s) 571
BsnI GGCC 3 cut(s) 44, 89, 1639
Bsp1286I GDGCHC 4 cut(s) 9, 599, 1569, 1733
Bsp1407I TGTACA 1 cut(s) 1311
Bsp143I GATC 6 cut(s) 443, 1199, 1417, 1442, 1483, 1747
Bsp1720I GCTNAGC 1 cut(s) 996
BspACI CCGC 7 cut(s) 165, 176, 208, 942, 1329, 1551, 1570
BspANI GGCC 3 cut(s) 44, 89, 1639
BspCNI CTCAG 5 cut(s) 4, 139, 163, 988, 1633
BspFNI CGCG 2 cut(s) 210, 1572
BspLI GGNNCC 3 cut(s) 550, 622, 1513
BspPI GGATC 2 cut(s) 451, 1207
BspT107I GGYRCC 1 cut(s) 548
BsrDI GCAATG 2 cut(s) 1212, 1237
BsrFI RCCGGY 1 cut(s) 938
BsrGI TGTACA 1 cut(s) 1311
BsrI ACTGG 3 cut(s) 483, 1330, 1366
BssAI RCCGGY 1 cut(s) 938
BssECI CCNNGG 7 cut(s) 159, 186, 439, 585, 826, 988, 1043
BssMI GATC 6 cut(s) 443, 1199, 1417, 1442, 1483, 1747
BssNAI GTATAC 1 cut(s) 374
BssT1I CCWWGG 4 cut(s) 159, 826, 988, 1043
Bst1107I GTATAC 1 cut(s) 374
Bst2UI CCWGG 1 cut(s) 440
Bst4CI ACNGT 7 cut(s) 338, 401, 980, 1111, 1282, 1350, 1390
Bst6I CTCTTC 3 cut(s) 415, 585, 642
BstAUI TGTACA 1 cut(s) 1311
BstBAI YACGTR 1 cut(s) 1261
BstC8I GCNNGC 4 cut(s) 97, 940, 968, 1687
BstDEI CTNAG 6 cut(s) 12, 126, 171, 996, 1626, 1641
BstDSI CCRYGG 2 cut(s) 186, 585
BstF5I GGATG 6 cut(s) 264, 614, 822, 950, 1037, 1531
BstFNI CGCG 2 cut(s) 210, 1572
BstHHI GCGC 2 cut(s) 185, 212
BstKTI GATC 6 cut(s) 446, 1202, 1420, 1445, 1486, 1750
BstMAI GTCTC 2 cut(s) 96, 491
BstMBI GATC 6 cut(s) 443, 1199, 1417, 1442, 1483, 1747
BstMCI CGRYCG 2 cut(s) 90, 1555
BstMWI GCNNNNNNNGC 2 cut(s) 105, 182
BstNI CCWGG 1 cut(s) 440
BstNSI RCATGY 1 cut(s) 970
BstSCI CCNGG 1 cut(s) 438
BstSFI CTRYAG 4 cut(s) 432, 726, 979, 1751
BstSLI GKGCMC 1 cut(s) 1569
BstUI CGCG 2 cut(s) 210, 1572
BstV1I GCAGC 4 cut(s) 306, 685, 1177, 1316
BstV2I GAAGAC 1 cut(s) 261
BstX2I RGATCY 2 cut(s) 1199, 1747
BstYI RGATCY 2 cut(s) 1199, 1747
BstZ17I GTATAC 1 cut(s) 374
BstZI CGGCCG 1 cut(s) 87
BsuRI GGCC 3 cut(s) 44, 89, 1639
BtgI CCRYGG 2 cut(s) 186, 585
BtsCI GGATG 6 cut(s) 264, 614, 822, 950, 1037, 1531
BtsI GCAGTG 2 cut(s) 115, 191
BtsIMutI CAGTG 6 cut(s) 115, 191, 201, 406, 753, 1733
Cac8I GCNNGC 4 cut(s) 97, 940, 968, 1687
CfoI GCGC 2 cut(s) 185, 212
Cfr10I RCCGGY 1 cut(s) 938
Cfr13I GGNCC 1 cut(s) 1585
Csp6I GTAC 2 cut(s) 780, 1312
CspCI CAANNNNNGTGG 2 cut(s) 910, 945
CviAII CATG 4 cut(s) 271, 447, 967, 1589
CviQI GTAC 2 cut(s) 780, 1312
DdeI CTNAG 6 cut(s) 12, 126, 171, 996, 1626, 1641
DpnI GATC 6 cut(s) 445, 1201, 1419, 1444, 1485, 1749
DpnII GATC 6 cut(s) 443, 1199, 1417, 1442, 1483, 1747
DraI TTTAAA 2 cut(s) 36, 1147
DraIII CACNNNGTG 2 cut(s) 644, 1661
EaeI YGGCCR 2 cut(s) 42, 87
EagI CGGCCG 1 cut(s) 87
Eam1104I CTCTTC 3 cut(s) 415, 585, 642
EarI CTCTTC 3 cut(s) 415, 585, 642
EciI GGCGGA 4 cut(s) 180, 191, 957, 1344
Ecl136II GAGCTC 2 cut(s) 7, 1731
EclXI CGGCCG 1 cut(s) 87
Eco130I CCWWGG 4 cut(s) 159, 826, 988, 1043
Eco24I GRGCYC 3 cut(s) 9, 599, 1733
Eco47I GGWCC 1 cut(s) 1585
Eco52I CGGCCG 1 cut(s) 87
Eco53kI GAGCTC 2 cut(s) 7, 1731
Eco57I CTGAAG 1 cut(s) 729
EcoICRI GAGCTC 2 cut(s) 7, 1731
EcoRII CCWGG 1 cut(s) 438
EcoT14I CCWWGG 4 cut(s) 159, 826, 988, 1043
EcoT38I GRGCYC 3 cut(s) 9, 599, 1733
ErhI CCWWGG 4 cut(s) 159, 826, 988, 1043
FaeI CATG 4 cut(s) 274, 450, 970, 1592
FaqI GGGAC 1 cut(s) 1260
FatI CATG 4 cut(s) 270, 446, 966, 1588
FblI GTMKAC 1 cut(s) 373
Fnu4HI GCNGC 4 cut(s) 320, 699, 1191, 1305
FokI GGATG 6 cut(s) 251, 621, 809, 957, 1044, 1518
FriOI GRGCYC 3 cut(s) 9, 599, 1733
Fsp4HI GCNGC 4 cut(s) 320, 699, 1191, 1305
FspBI CTAG 4 cut(s) 570, 1044, 1196, 1607
GlaI GCGC 2 cut(s) 184, 211
GluI GCNGC 4 cut(s) 320, 699, 1191, 1305
GsuI CTGGAG 1 cut(s) 823
HaeIII GGCC 3 cut(s) 44, 89, 1639
HapII CCGG 4 cut(s) 90, 139, 152, 939
HhaI GCGC 2 cut(s) 185, 212
Hin1II CATG 4 cut(s) 274, 450, 970, 1592
Hin6I GCGC 2 cut(s) 183, 210
HinP1I GCGC 2 cut(s) 183, 210
HincII GTYRAC 2 cut(s) 244, 537
HindII GTYRAC 2 cut(s) 244, 537
HpaII CCGG 4 cut(s) 90, 139, 152, 939
HphI GGTGA 1 cut(s) 1647
Hpy166II GTNNAC 9 cut(s) 113, 244, 348, 374, 502, 537, 751, 1567, 1647
Hpy188I TCNGA 8 cut(s) 13, 56, 73, 392, 757, 1072, 1292, 1467
Hpy188III TCNNGA 5 cut(s) 236, 840, 1319, 1427, 1509
Hpy8I GTNNAC 9 cut(s) 113, 244, 348, 374, 502, 537, 751, 1567, 1647
HpyAV CCTTC 6 cut(s) 304, 397, 539, 753, 848, 1237
HpyCH4III ACNGT 7 cut(s) 338, 401, 980, 1111, 1282, 1350, 1390
HpyCH4IV ACGT 2 cut(s) 1249, 1260
HpyCH4V TGCA 8 cut(s) 638, 877, 970, 1193, 1230, 1567, 1685, 1706
HpyF10VI GCNNNNNNNGC 2 cut(s) 105, 182
HpyF3I CTNAG 6 cut(s) 12, 126, 171, 996, 1626, 1641
HpySE526I ACGT 2 cut(s) 1249, 1260
Hsp92II CATG 4 cut(s) 274, 450, 970, 1592
HspAI GCGC 2 cut(s) 183, 210
KroI GCCGGC 1 cut(s) 938
KroNI GCCGGC 1 cut(s) 940
Kzo9I GATC 6 cut(s) 443, 1199, 1417, 1442, 1483, 1747
LmnI GCTCC 7 cut(s) 4, 92, 167, 392, 620, 992, 1610
Lsp1109I GCAGC 4 cut(s) 306, 685, 1177, 1316
LweI GCATC 2 cut(s) 935, 1022
MaeI CTAG 4 cut(s) 570, 1044, 1196, 1607
MaeII ACGT 2 cut(s) 1249, 1260
MaeIII GTNAC 5 cut(s) 15, 461, 833, 1208, 1282
MalI GATC 6 cut(s) 445, 1201, 1419, 1444, 1485, 1749
MboI GATC 6 cut(s) 443, 1199, 1417, 1442, 1483, 1747
MboII GAAGA 9 cut(s) 15, 138, 266, 287, 432, 464, 602, 659, 1005
MflI RGATCY 2 cut(s) 1199, 1747
MhlI GDGCHC 4 cut(s) 9, 599, 1569, 1733
MlsI TGGCCA 1 cut(s) 44
MluCI AATT 6 cut(s) 31, 688, 884, 1142, 1365, 1409
MluNI TGGCCA 1 cut(s) 44
MlyI GAGTC 8 cut(s) 23, 92, 239, 251, 662, 746, 830, 1385
MmeI TCCRAC 2 cut(s) 910, 1413
Mox20I TGGCCA 1 cut(s) 44
MroNI GCCGGC 1 cut(s) 938
MscI TGGCCA 1 cut(s) 44
MseI TTAA 8 cut(s) 30, 35, 285, 614, 1146, 1299, 1473, 1667
MslI CAYNNNNRTG 2 cut(s) 269, 517
Msp20I TGGCCA 1 cut(s) 44
MspI CCGG 4 cut(s) 90, 139, 152, 939
MspR9I CCNGG 1 cut(s) 440
Mva1269I GAATGC 1 cut(s) 571
MvaI CCWGG 1 cut(s) 440
MvnI CGCG 2 cut(s) 210, 1572
MwoI GCNNNNNNNGC 2 cut(s) 105, 182
NaeI GCCGGC 1 cut(s) 940
NdeII GATC 6 cut(s) 443, 1199, 1417, 1442, 1483, 1747
NgoMIV GCCGGC 1 cut(s) 938
NlaIII CATG 4 cut(s) 274, 450, 970, 1592
NlaIV GGNNCC 3 cut(s) 550, 622, 1513
NmuCI GTSAC 3 cut(s) 15, 833, 1282
NspI RCATGY 1 cut(s) 970
PaeI GCATGC 1 cut(s) 970
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PctI GAATGC 1 cut(s) 571
PdiI GCCGGC 1 cut(s) 940
PfeI GAWTC 5 cut(s) 78, 155, 232, 1163, 1652
PflFI GACNNNGTC 1 cut(s) 260
PkrI GCNGC 4 cut(s) 321, 700, 1192, 1306
PleI GAGTC 8 cut(s) 22, 91, 239, 251, 661, 746, 830, 1384
PpsI GAGTC 8 cut(s) 22, 91, 239, 251, 661, 746, 830, 1384
Ppu21I YACGTR 1 cut(s) 1261
PshBI ATTAAT 1 cut(s) 30
Psp124BI GAGCTC 2 cut(s) 9, 1733
Psp6I CCWGG 1 cut(s) 438
PspGI CCWGG 1 cut(s) 438
PspN4I GGNNCC 3 cut(s) 550, 622, 1513
PspPI GGNCC 1 cut(s) 1585
PsrI GAACNNNNNNTAC 2 cut(s) 1389, 1421
PsuI RGATCY 2 cut(s) 1199, 1747
PsyI GACNNNGTC 1 cut(s) 260
RsaI GTAC 2 cut(s) 781, 1313
RsaNI GTAC 2 cut(s) 780, 1312
RseI CAYNNNNRTG 2 cut(s) 269, 517
SacI GAGCTC 2 cut(s) 9, 1733
SaqAI TTAA 8 cut(s) 30, 35, 285, 614, 1146, 1299, 1473, 1667
SatI GCNGC 4 cut(s) 320, 699, 1191, 1305
Sau3AI GATC 6 cut(s) 443, 1199, 1417, 1442, 1483, 1747
Sau96I GGNCC 1 cut(s) 1585
SchI GAGTC 8 cut(s) 23, 92, 239, 251, 662, 746, 830, 1385
ScrFI CCNGG 1 cut(s) 440
SduI GDGCHC 4 cut(s) 9, 599, 1569, 1733
SfaNI GCATC 2 cut(s) 935, 1022
SfcI CTRYAG 4 cut(s) 432, 726, 979, 1751
SinI GGWCC 1 cut(s) 1585
SmiMI CAYNNNNRTG 2 cut(s) 269, 517
SphI GCATGC 1 cut(s) 970
Sse9I AATT 6 cut(s) 31, 688, 884, 1142, 1365, 1409
SsiI CCGC 7 cut(s) 165, 176, 208, 942, 1329, 1551, 1570
SspI AATATT 2 cut(s) 1335, 1471
SspMI CTAG 4 cut(s) 570, 1044, 1196, 1607
SstI GAGCTC 2 cut(s) 9, 1733
StyD4I CCNGG 1 cut(s) 438
StyI CCWWGG 4 cut(s) 159, 826, 988, 1043
TaaI ACNGT 7 cut(s) 338, 401, 980, 1111, 1282, 1350, 1390
TaiI ACGT 2 cut(s) 1252, 1263
TaqI TCGA 2 cut(s) 81, 1631
TaqII GACCGA 1 cut(s) 250
TasI AATT 6 cut(s) 31, 688, 884, 1142, 1365, 1409
TatI WGTACW 1 cut(s) 1311
TfiI GAWTC 5 cut(s) 78, 155, 232, 1163, 1652
Tru1I TTAA 8 cut(s) 30, 35, 285, 614, 1146, 1299, 1473, 1667
Tru9I TTAA 8 cut(s) 30, 35, 285, 614, 1146, 1299, 1473, 1667
TscAI CASTG 6 cut(s) 115, 198, 208, 406, 753, 1740
TseFI GTSAC 3 cut(s) 15, 833, 1282
TseI GCWGC 4 cut(s) 319, 698, 1190, 1304
Tsp45I GTSAC 3 cut(s) 15, 833, 1282
TspDTI ATGAA 7 cut(s) 356, 558, 825, 1113, 1152, 1248, 1663
TspGWI ACGGA 3 cut(s) 238, 602, 1211
TspRI CASTG 6 cut(s) 115, 198, 208, 406, 753, 1740
Tth111I GACNNNGTC 1 cut(s) 260
VneI GTGCAC 1 cut(s) 1565
VpaK11BI GGWCC 1 cut(s) 1585
VspI ATTAAT 1 cut(s) 30
XapI RAATTY 2 cut(s) 884, 1142
XceI RCATGY 1 cut(s) 970
XmaJI CCTAGG 1 cut(s) 1043
XmiI GTMKAC 1 cut(s) 373
XspI CTAG 4 cut(s) 570, 1044, 1196, 1607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.