MD08G1134000.v1.1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
12764928 .. 12766536
1609 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1134000.v1.1.491

Sequence Viewer

Length: 1416 bp
ATGGCTGACGGTGACCAACACCATCAAAACCAATCCCAAGTGGTAGTTGTCATGGTGCCCTTGCCAGCCCAAGGCCACCTCAACCAACTCCTCCACCTCTCTCGCCTCATCTCCGCCTACAATATCCCCGTCCACTACGTTGGTGCCGCCACTCACAACTGCCAAGCCAAGCTCCGAGCCCACGATTGGGATCAAACCTCAGTCTACAAGATACAATTCCATGACTTCCCAACGCCTCCTTTCCTCTCCCCTCCTCCTAACCCCAATGCCACAAACAAGTTTCCCTCTCATCTCCAACCCTCCTTCGAAGCCACCGCCCACCTCCGCCAGCCCCTGGCGAAGCTCTTACGCGAGTTGTCACTCAAAGGAAGAAGGGTCATCGTCATCCACGACTCCATGATGGCTTCAATCATTCAAGATGTTGCTTCTATACCAAACGGAGAGTCCTACACTTTCCACTCCGTCTCTGCCTTTACGATTTTTTTGTACTTGTGGGAAGTAATCGGAAAACCGAAAAAGCTCGAGGAGCTCGATGTCAAGCTCCCAGACGGCATCCCATCTCTCGAAGGTTGTTTCACTGTTGAGTTCAGGAATTTCATTGATGAACAACATAAATACCAAAAGTTGAACAACGCAGGGAACCTTCACAACACCAGTAGAACCATTGAAGGACCGTACATGGATTTACTCAACAGGATTGGTGATCAGAAGAAGCATTGGGCCATAGGGCCATTCAACCCTACAACGGTTGCGTACCCTAATAACAATTCAAATAGTAGTAGACACATGTGTTTGGAATGGTTGGACAAACAAGAACAAAGTTCAGTGATGTATGTGTCTTTTGGGACCACCACAGCCATGAAAGATGAGCAGATTCAAGAGCTGGCAATTGGGTTGGAGGAAAGCAAGCAAAGGTTCATTTGGGTTTTGAGGGATGCTGATAAAGGCGACCTTTCGAATGGTGCGGAGGTTAGAAGGGCTAAGCTGCCAGAAGGAATTGAAGAGAGATTCAAAGGTAGGGGATTGGTGGTTAGAGATTGGGCCCCACAGTTGGAAATCCTGTCCCACAAATCAACAGGAGGGTTTCTGAGTCACTGTGGGTGGAACTCATGCATGGAGAGCATCACCATGGGGGTCCCTATAGCAGCTTGGCCAATGCACTCTGACCAACCAAGGAACACTGTTTTGATCACAAAGTTGCTTGGAGTTGGGTTTGTGATGAGGGATTGGGATAAGAGGGATGAGCTTGTCACGTCACAGAACGTTAAAAATGGTGTGCAGAAATTTATGGGGTCTAAAGAAGGGGAGGAGATAAGGAAGAGGGCAGCGGAGTTGGGGGCTGCCGTCCGCCAGTCGAGGGTTGAAGGCCCTTGGACTCAGACTCGTAGATTTCCATCCTGTCATAGCTCGAGATAA

Protein Analysis

472

Amino Acids

53.26

Weight (kDa)

8.41

Isoelectric Point (pI)

48.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 247 2.9e-85 Glycosyltransferase, N-terminal domain
UDPGT PF00201 273 - 400 1.1e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 55, 143
AccB7I CCANNNNNTGG 1 cut(s) 334
AccI GTMKAC 2 cut(s) 204, 781
AccII CGCG 1 cut(s) 351
AciI CCGC 7 cut(s) 114, 147, 315, 325, 965, 1328, 1348
AclI AACGTT 1 cut(s) 1263
AclWI GGATC 1 cut(s) 198
AcoI YGGCCR 1 cut(s) 1151
AcsI RAATTY 2 cut(s) 592, 1283
AfaI GTAC 3 cut(s) 488, 677, 755
AfiI CCNNNNNNNGG 7 cut(s) 71, 186, 187, 334, 745, 1051, 1357
AflIII ACRYGT 1 cut(s) 786
AjiI CACGTC 1 cut(s) 1254
AjnI CCWGG 1 cut(s) 333
Alw21I GWGCWC 1 cut(s) 531
Alw26I GTCTC 1 cut(s) 469
AlwI GGATC 1 cut(s) 198
AlwNI CAGNNNCTG 1 cut(s) 334
Ama87I CYCGRG 2 cut(s) 521, 1408
AoxI GGCC 6 cut(s) 73, 720, 728, 1041, 1151, 1366
ApaI GGGCCC 1 cut(s) 1045
ApeKI GCWGC 4 cut(s) 985, 1145, 1325, 1340
ApoI RAATTY 2 cut(s) 592, 1283
ArsI GACNNNNNNTTYG 2 cut(s) 428, 460
AspS9I GGNCC 8 cut(s) 671, 720, 728, 846, 1041, 1042, 1135, 1367
AsuHPI GGTGA 3 cut(s) 23, 713, 1117
AsuII TTCGAA 2 cut(s) 306, 956
AvaI CYCGRG 2 cut(s) 521, 1408
AvaII GGWCC 3 cut(s) 671, 846, 1135
BaeGI GKGCMC 2 cut(s) 60, 1045
BalI TGGCCA 1 cut(s) 1153
BanI GGYRCC 2 cut(s) 55, 143
BanII GRGCYC 3 cut(s) 181, 531, 1045
Bbv12I GWGCWC 1 cut(s) 531
BbvI GCAGC 4 cut(s) 972, 1157, 1327, 1337
BccI CCATC 4 cut(s) 30, 394, 565, 1402
BceAI ACGGC 2 cut(s) 565, 1328
BciT130I CCWGG 1 cut(s) 335
BclI TGATCA 2 cut(s) 703, 1188
BcoDI GTCTC 1 cut(s) 469
BfmI CTRYAG 1 cut(s) 1140
BisI GCNGC 5 cut(s) 147, 986, 1146, 1326, 1341
BlpI GCTNAGC 1 cut(s) 981
BlsI GCNGC 5 cut(s) 148, 987, 1147, 1327, 1342
Bme1390I CCNGG 1 cut(s) 335
Bme18I GGWCC 3 cut(s) 671, 846, 1135
BmeT110I CYCGRG 2 cut(s) 521, 1408
BmgBI CACGTC 1 cut(s) 1254
BmgT120I GGNCC 8 cut(s) 671, 720, 728, 846, 1041, 1042, 1135, 1367
BmiI GGNNCC 8 cut(s) 57, 145, 641, 847, 1043, 1044, 1136, 1137
BmrFI CCNGG 1 cut(s) 335
BmsI GCATC 3 cut(s) 561, 925, 1131
Bpu1102I GCTNAGC 1 cut(s) 981
Bpu14I TTCGAA 2 cut(s) 306, 956
BsaBI GATNNNNATC 2 cut(s) 189, 1393
BsaJI CCNNGG 5 cut(s) 70, 333, 1128, 1172, 1370
Bsc4I CCNNNNNNNGG 7 cut(s) 71, 186, 187, 334, 745, 1051, 1357
Bse1I ACTGG 2 cut(s) 654, 1351
Bse8I GATNNNNATC 2 cut(s) 189, 1393
BseBI CCWGG 1 cut(s) 335
BseDI CCNNGG 5 cut(s) 70, 333, 1128, 1172, 1370
BseGI GGATG 5 cut(s) 384, 552, 940, 1246, 1394
BseJI GATNNNNATC 2 cut(s) 189, 1393
BseLI CCNNNNNNNGG 7 cut(s) 71, 186, 187, 334, 745, 1051, 1357
BseMII CTCAG 3 cut(s) 213, 1079, 1391
BseNI ACTGG 2 cut(s) 654, 1351
BseRI GAGGAG 4 cut(s) 80, 243, 539, 1322
BseSI GKGCMC 2 cut(s) 60, 1045
BseXI GCAGC 4 cut(s) 972, 1157, 1327, 1337
BsgI GTGCAG 1 cut(s) 1298
Bsh1236I CGCG 1 cut(s) 351
BshFI GGCC 6 cut(s) 75, 722, 730, 1043, 1153, 1368
BshNI GGYRCC 2 cut(s) 55, 143
BsiHKAI GWGCWC 1 cut(s) 531
BsiHKCI CYCGRG 2 cut(s) 521, 1408
BslFI GGGAC 3 cut(s) 859, 1048, 1121
BslI CCNNNNNNNGG 7 cut(s) 71, 186, 187, 334, 745, 1051, 1357
BsmAI GTCTC 1 cut(s) 469
BsmBI CGTCTC 1 cut(s) 469
BsmFI GGGAC 3 cut(s) 859, 1048, 1121
BsnI GGCC 6 cut(s) 75, 722, 730, 1043, 1153, 1368
BsoBI CYCGRG 2 cut(s) 521, 1408
Bsp119I TTCGAA 2 cut(s) 306, 956
Bsp120I GGGCCC 1 cut(s) 1041
Bsp1286I GDGCHC 4 cut(s) 60, 181, 531, 1045
Bsp143I GATC 3 cut(s) 190, 703, 1188
Bsp1720I GCTNAGC 1 cut(s) 981
Bsp19I CCATGG 1 cut(s) 1128
BspACI CCGC 7 cut(s) 114, 147, 315, 325, 965, 1328, 1348
BspANI GGCC 6 cut(s) 75, 722, 730, 1043, 1153, 1368
BspCNI CTCAG 3 cut(s) 212, 1080, 1390
BspFNI CGCG 1 cut(s) 351
BspLI GGNNCC 8 cut(s) 57, 145, 641, 847, 1043, 1044, 1136, 1137
BspPI GGATC 1 cut(s) 198
BspT104I TTCGAA 2 cut(s) 306, 956
BspT107I GGYRCC 2 cut(s) 55, 143
BsrI ACTGG 2 cut(s) 654, 1351
BssECI CCNNGG 5 cut(s) 70, 333, 1128, 1172, 1370
BssMI GATC 3 cut(s) 190, 703, 1188
BssT1I CCWWGG 4 cut(s) 70, 1128, 1172, 1370
Bst2UI CCWGG 1 cut(s) 335
Bst4CI ACNGT 7 cut(s) 11, 580, 675, 748, 1050, 1097, 1183
Bst6I CTCTTC 2 cut(s) 996, 1313
BstBI TTCGAA 2 cut(s) 306, 956
BstC8I GCNNGC 4 cut(s) 66, 329, 885, 908
BstDEI CTNAG 4 cut(s) 199, 981, 1088, 1377
BstDSI CCRYGG 1 cut(s) 1128
BstEII GGTNACC 1 cut(s) 11
BstF5I GGATG 5 cut(s) 384, 552, 940, 1246, 1394
BstFNI CGCG 1 cut(s) 351
BstKTI GATC 3 cut(s) 193, 706, 1191
BstMAI GTCTC 1 cut(s) 469
BstMBI GATC 3 cut(s) 190, 703, 1188
BstMWI GCNNNNNNNGC 2 cut(s) 526, 1119
BstNI CCWGG 1 cut(s) 335
BstNSI RCATGY 1 cut(s) 790
BstPI GGTNACC 1 cut(s) 11
BstSCI CCNGG 1 cut(s) 333
BstSFI CTRYAG 1 cut(s) 1140
BstSLI GKGCMC 2 cut(s) 60, 1045
BstUI CGCG 1 cut(s) 351
BstV1I GCAGC 4 cut(s) 972, 1157, 1327, 1337
BstXI CCANNNNNNTGG 1 cut(s) 140
BsuRI GGCC 6 cut(s) 75, 722, 730, 1043, 1153, 1368
BtgI CCRYGG 1 cut(s) 1128
BtrI CACGTC 1 cut(s) 1254
BtsCI GGATG 5 cut(s) 384, 552, 940, 1246, 1394
BtsIMutI CAGTG 4 cut(s) 576, 831, 1093, 1179
Cac8I GCNNGC 4 cut(s) 66, 329, 885, 908
CaiI CAGNNNCTG 1 cut(s) 334
Cfr13I GGNCC 8 cut(s) 671, 720, 728, 846, 1041, 1042, 1135, 1367
Csp6I GTAC 3 cut(s) 487, 676, 754
CviAII CATG 9 cut(s) 52, 221, 397, 679, 787, 859, 1110, 1114, 1129
CviQI GTAC 3 cut(s) 487, 676, 754
DdeI CTNAG 4 cut(s) 199, 981, 1088, 1377
DpnI GATC 3 cut(s) 192, 705, 1190
DpnII GATC 3 cut(s) 190, 703, 1188
EaeI YGGCCR 1 cut(s) 1151
Eam1104I CTCTTC 2 cut(s) 996, 1313
EarI CTCTTC 2 cut(s) 996, 1313
EciI GGCGGA 3 cut(s) 103, 314, 1337
Ecl136II GAGCTC 1 cut(s) 529
Eco130I CCWWGG 4 cut(s) 70, 1128, 1172, 1370
Eco24I GRGCYC 3 cut(s) 181, 531, 1045
Eco47I GGWCC 3 cut(s) 671, 846, 1135
Eco53kI GAGCTC 1 cut(s) 529
Eco88I CYCGRG 2 cut(s) 521, 1408
Eco91I GGTNACC 1 cut(s) 11
EcoICRI GAGCTC 1 cut(s) 529
EcoO109I RGGNCCY 3 cut(s) 1042, 1135, 1367
EcoO65I GGTNACC 1 cut(s) 11
EcoRII CCWGG 1 cut(s) 333
EcoT14I CCWWGG 4 cut(s) 70, 1128, 1172, 1370
EcoT22I ATGCAT 1 cut(s) 1115
EcoT38I GRGCYC 3 cut(s) 181, 531, 1045
ErhI CCWWGG 4 cut(s) 70, 1128, 1172, 1370
Esp3I CGTCTC 1 cut(s) 469
FaeI CATG 9 cut(s) 55, 224, 400, 682, 790, 862, 1113, 1117, 1132
FalI AAGNNNNNCTT 2 cut(s) 936, 968
FaqI GGGAC 3 cut(s) 859, 1048, 1121
FatI CATG 9 cut(s) 51, 220, 396, 678, 786, 858, 1109, 1113, 1128
FbaI TGATCA 2 cut(s) 703, 1188
FblI GTMKAC 2 cut(s) 204, 781
Fnu4HI GCNGC 5 cut(s) 147, 986, 1146, 1326, 1341
FokI GGATG 5 cut(s) 371, 539, 947, 1253, 1381
FriOI GRGCYC 3 cut(s) 181, 531, 1045
Fsp4HI GCNGC 5 cut(s) 147, 986, 1146, 1326, 1341
GluI GCNGC 5 cut(s) 147, 986, 1146, 1326, 1341
HaeIII GGCC 6 cut(s) 75, 722, 730, 1043, 1153, 1368
Hin1II CATG 9 cut(s) 55, 224, 400, 682, 790, 862, 1113, 1117, 1132
HinfI GANTC 7 cut(s) 392, 443, 874, 1008, 1090, 1375, 1381
HphI GGTGA 3 cut(s) 23, 713, 1117
Hpy166II GTNNAC 3 cut(s) 133, 205, 782
Hpy188I TCNGA 6 cut(s) 176, 506, 708, 1089, 1165, 1380
Hpy188III TCNNGA 5 cut(s) 416, 563, 589, 878, 1410
Hpy8I GTNNAC 3 cut(s) 133, 205, 782
HpyAV CCTTC 9 cut(s) 313, 366, 560, 653, 662, 969, 986, 1295, 1358
HpyCH4III ACNGT 7 cut(s) 11, 580, 675, 748, 1050, 1097, 1183
HpyCH4IV ACGT 3 cut(s) 138, 1253, 1263
HpyCH4V TGCA 3 cut(s) 1113, 1159, 1279
HpyF10VI GCNNNNNNNGC 2 cut(s) 526, 1119
HpyF3I CTNAG 4 cut(s) 199, 981, 1088, 1377
HpySE526I ACGT 3 cut(s) 138, 1253, 1263
Hsp92II CATG 9 cut(s) 55, 224, 400, 682, 790, 862, 1113, 1117, 1132
KflI GGGWCCC 1 cut(s) 1135
Ksp22I TGATCA 2 cut(s) 703, 1188
Kzo9I GATC 3 cut(s) 190, 703, 1188
LmnI GCTCC 3 cut(s) 177, 526, 546
Lsp1109I GCAGC 4 cut(s) 972, 1157, 1327, 1337
LweI GCATC 3 cut(s) 561, 925, 1131
MaeII ACGT 3 cut(s) 138, 1253, 1263
MaeIII GTNAC 5 cut(s) 11, 357, 1091, 1249, 1254
MalI GATC 3 cut(s) 192, 705, 1190
MboI GATC 3 cut(s) 190, 703, 1188
MboII GAAGA 4 cut(s) 381, 721, 1013, 1330
MfeI CAATTG 1 cut(s) 888
MhlI GDGCHC 4 cut(s) 60, 181, 531, 1045
MlsI TGGCCA 1 cut(s) 1153
MluCI AATT 6 cut(s) 215, 592, 766, 888, 996, 1283
MluNI TGGCCA 1 cut(s) 1153
MlyI GAGTC 5 cut(s) 386, 452, 1099, 1369, 1375
MmeI TCCRAC 4 cut(s) 319, 783, 876, 1032
Mox20I TGGCCA 1 cut(s) 1153
Mph1103I ATGCAT 1 cut(s) 1115
MscI TGGCCA 1 cut(s) 1153
MseI TTAA 1 cut(s) 1266
MslI CAYNNNNRTG 2 cut(s) 857, 1127
Msp20I TGGCCA 1 cut(s) 1153
MspA1I CMGCKG 1 cut(s) 1328
MspR9I CCNGG 1 cut(s) 335
MunI CAATTG 1 cut(s) 888
MvaI CCWGG 1 cut(s) 335
MvnI CGCG 1 cut(s) 351
MwoI GCNNNNNNNGC 2 cut(s) 526, 1119
NcoI CCATGG 1 cut(s) 1128
NdeII GATC 3 cut(s) 190, 703, 1188
NlaIII CATG 9 cut(s) 55, 224, 400, 682, 790, 862, 1113, 1117, 1132
NlaIV GGNNCC 8 cut(s) 57, 145, 641, 847, 1043, 1044, 1136, 1137
NmuCI GTSAC 5 cut(s) 11, 357, 1091, 1249, 1254
NsiI ATGCAT 1 cut(s) 1115
NspI RCATGY 1 cut(s) 790
NspV TTCGAA 2 cut(s) 306, 956
PaeR7I CTCGAG 2 cut(s) 521, 1408
PciI ACATGT 1 cut(s) 786
PcsI WCGNNNNNNNCGW 2 cut(s) 387, 528
PfeI GAWTC 2 cut(s) 874, 1008
PflMI CCANNNNNTGG 1 cut(s) 334
PkrI GCNGC 5 cut(s) 148, 987, 1147, 1327, 1342
PleI GAGTC 5 cut(s) 386, 451, 1098, 1369, 1375
PpsI GAGTC 5 cut(s) 386, 451, 1098, 1369, 1375
PpuMI RGGWCCY 1 cut(s) 1135
PscI ACATGT 1 cut(s) 786
Psp124BI GAGCTC 1 cut(s) 531
Psp1406I AACGTT 1 cut(s) 1263
Psp5II RGGWCCY 1 cut(s) 1135
Psp6I CCWGG 1 cut(s) 333
PspEI GGTNACC 1 cut(s) 11
PspGI CCWGG 1 cut(s) 333
PspN4I GGNNCC 8 cut(s) 57, 145, 641, 847, 1043, 1044, 1136, 1137
PspOMI GGGCCC 1 cut(s) 1041
PspPI GGNCC 8 cut(s) 671, 720, 728, 846, 1041, 1042, 1135, 1367
PspPPI RGGWCCY 1 cut(s) 1135
PspXI VCTCGAGB 1 cut(s) 521
PstNI CAGNNNCTG 1 cut(s) 334
RsaI GTAC 3 cut(s) 488, 677, 755
RsaNI GTAC 3 cut(s) 487, 676, 754
RseI CAYNNNNRTG 2 cut(s) 857, 1127
SacI GAGCTC 1 cut(s) 531
SaqAI TTAA 1 cut(s) 1266
SatI GCNGC 5 cut(s) 147, 986, 1146, 1326, 1341
Sau3AI GATC 3 cut(s) 190, 703, 1188
Sau96I GGNCC 8 cut(s) 671, 720, 728, 846, 1041, 1042, 1135, 1367
SchI GAGTC 5 cut(s) 386, 452, 1099, 1369, 1375
ScrFI CCNGG 1 cut(s) 335
SduI GDGCHC 4 cut(s) 60, 181, 531, 1045
SfaNI GCATC 3 cut(s) 561, 925, 1131
SfcI CTRYAG 1 cut(s) 1140
Sfr274I CTCGAG 2 cut(s) 521, 1408
SfuI TTCGAA 2 cut(s) 306, 956
SinI GGWCC 3 cut(s) 671, 846, 1135
SlaI CTCGAG 2 cut(s) 521, 1408
SmiMI CAYNNNNRTG 2 cut(s) 857, 1127
SmlI CTYRAG 2 cut(s) 521, 1408
SmoI CTYRAG 2 cut(s) 521, 1408
Sse9I AATT 6 cut(s) 215, 592, 766, 888, 996, 1283
SsiI CCGC 7 cut(s) 114, 147, 315, 325, 965, 1328, 1348
SstI GAGCTC 1 cut(s) 531
StyD4I CCNGG 1 cut(s) 333
StyI CCWWGG 4 cut(s) 70, 1128, 1172, 1370
TaaI ACNGT 7 cut(s) 11, 580, 675, 748, 1050, 1097, 1183
TaiI ACGT 3 cut(s) 141, 1256, 1266
TaqI TCGA 7 cut(s) 306, 522, 531, 564, 956, 1355, 1409
TasI AATT 6 cut(s) 215, 592, 766, 888, 996, 1283
TatI WGTACW 1 cut(s) 486
TauI GCSGC 1 cut(s) 149
TfiI GAWTC 2 cut(s) 874, 1008
Tru1I TTAA 1 cut(s) 1266
Tru9I TTAA 1 cut(s) 1266
TscAI CASTG 4 cut(s) 583, 831, 1100, 1186
TseFI GTSAC 5 cut(s) 11, 357, 1091, 1249, 1254
TseI GCWGC 4 cut(s) 985, 1145, 1325, 1340
Tsp45I GTSAC 5 cut(s) 11, 357, 1091, 1249, 1254
TspDTI ATGAA 4 cut(s) 586, 618, 875, 907
TspGWI ACGGA 2 cut(s) 451, 453
TspRI CASTG 4 cut(s) 583, 831, 1100, 1186
Van91I CCANNNNNTGG 1 cut(s) 334
VpaK11BI GGWCC 3 cut(s) 671, 846, 1135
XapI RAATTY 2 cut(s) 592, 1283
XceI RCATGY 1 cut(s) 790
XhoI CTCGAG 2 cut(s) 521, 1408
XmiI GTMKAC 2 cut(s) 204, 781
Zsp2I ATGCAT 1 cut(s) 1115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.