Rmu_co8444503.1_g000001

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8444503.1
Physical Location & Seq
Forward (+)
122 .. 1552
1431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8444503.1_g000001.1.cds

Sequence Viewer

Length: 1431 bp
atggcttccaactaccaaaacaatgcccctaatgaagtggtggttgtcatggttcctttaccggcacaaggccacctcaaccagctcctccacctctcccgcctcatctccgcctacaacatccccgtccactttgtcggaacccccaatcataaccgtcaagccaaggtccgagtccacggctgggatcaaacctcagacgtcaaaaacacgatccacttccatgacttcatcatccctcctgtcttttgccctcctcccaaccccaatgcaccaaacaagttcccttctcatctcctacccacgtttgaagccaccacccatctccgcagccctgtcgccgcacttctacgaaatctagcctcccaaacaaggcgagtggtggtcatccacgactccatcatggcttccgtcatccaagacattggttctatcgtcaacggcgagtcttacaccttccacactgtctccgccttcgccgtcttcttgttcttgtgggaaggaattggatgtccacctgaactcgaaggggtacaagtcaagagtaaaatccccgataccaccccgggtctggaggattgcttcccagacgagttcttgaattttattgttacacagtatgaatacacagtgtacaactccgggaacatctacaacgccagcagaaccatagaaggtgattacattgatttactgaacaaacttggtgataacaagaagcattgggctgttgggccgttcaacccagttttagtaccggagaaaaaagaaggctcaaatgatggtaaaaggcacgcttgcttggaatggcttgataaacaagaaccaaactcggtgatctacgtgtcgtttgggacaacaacatgcatgacagacgagcagatcaaggagctggctattgggttggaacaaagcaacaagaagttcatttgggtgttgagggatgctgataaaggtgaccttttcattgacggagaccaagttagaaaggctgagcttccagaagggtacgaagagaaagtgaaagataggggagcagtggtcagagattgggccccccaattggagattttgtcccacaaatcaactgcttggtttctgagtcactgtggatggaactcgtgcatggagagcctcactttgggagtgcccatagcatgttggccgatgcactcagaccaaccgaggaacacgactttggtgacgagggtgctcaaagttggtctcgttataagggattgggagagaaggaacgagcttcttacgtcgtcaatggtgaaagatggtgtggagaaactgatgggatctggagaagtggatgagataaggaagaaggcaagagagttgggtgctgccgtaagaggatctatggtggaaggtggagattctcgcgtggagttgtcttcttttattgctcacatcaccagataa

Protein Analysis

476

Amino Acids

53.31

Weight (kDa)

6.03

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1232
AatII GACGTC 1 cut(s) 204
AccII CGCG 1 cut(s) 1392
AciI CCGC 5 cut(s) 100, 111, 328, 342, 471
AclWI GGATC 4 cut(s) 195, 208, 1312, 1372
AcoI YGGCCR 1 cut(s) 1163
AcsI RAATTY 1 cut(s) 601
AcyI GRCGYC 1 cut(s) 201
AfaI GTAC 4 cut(s) 534, 635, 756, 1010
AfiI CCNNNNNNNGG 6 cut(s) 68, 184, 372, 571, 1063, 1141
AflIII ACRYGT 1 cut(s) 843
AgsI TTSAA 3 cut(s) 311, 601, 742
AjuI GAANNNNNNNTTGG 2 cut(s) 1181, 1213
AluBI AGCT 4 cut(s) 85, 892, 997, 1258
AluI AGCT 4 cut(s) 85, 892, 997, 1258
Alw21I GWGCWC 1 cut(s) 1215
Alw26I GTCTC 3 cut(s) 472, 969, 1229
AlwI GGATC 4 cut(s) 195, 208, 1312, 1372
Ama87I CYCGRG 1 cut(s) 565
AoxI GGCC 4 cut(s) 70, 734, 1053, 1163
ApaI GGGCCC 1 cut(s) 1057
ApeKI GCWGC 2 cut(s) 330, 1352
ApoI RAATTY 1 cut(s) 601
AspS9I GGNCC 4 cut(s) 169, 734, 1053, 1054
AsuC2I CCSGG 3 cut(s) 566, 567, 643
AsuHPI GGTGA 7 cut(s) 689, 719, 847, 968, 1213, 1288, 1414
AvaI CYCGRG 1 cut(s) 565
AvaII GGWCC 1 cut(s) 169
BaeGI GKGCMC 2 cut(s) 1057, 1152
BanII GRGCYC 1 cut(s) 1057
BauI CACGAG 1 cut(s) 1120
BbsI GAAGAC 2 cut(s) 475, 1395
Bbv12I GWGCWC 1 cut(s) 1215
BbvI GCAGC 2 cut(s) 342, 1339
BccI CCATC 6 cut(s) 330, 407, 776, 1107, 1277, 1294
BceAI ACGGC 5 cut(s) 196, 457, 464, 721, 1340
BcgI CGANNNNNNTGC 2 cut(s) 319, 353
BcnI CCSGG 3 cut(s) 566, 567, 643
BcoDI GTCTC 3 cut(s) 472, 969, 1229
BfaI CTAG 1 cut(s) 359
BisI GCNGC 3 cut(s) 331, 342, 1353
BlpI GCTNAGC 1 cut(s) 993
BlsI GCNGC 3 cut(s) 332, 343, 1354
Bme1390I CCNGG 3 cut(s) 566, 567, 643
Bme18I GGWCC 1 cut(s) 169
BmeT110I CYCGRG 1 cut(s) 565
BmgT120I GGNCC 4 cut(s) 169, 734, 1053, 1054
BmiI GGNNCC 4 cut(s) 54, 142, 1055, 1056
BmrFI CCNGG 3 cut(s) 566, 567, 643
BmrI ACTGGG 1 cut(s) 740
BmsI GCATC 2 cut(s) 934, 1158
BmuI ACTGGG 1 cut(s) 740
BpiI GAAGAC 2 cut(s) 475, 1395
BpmI CTGGAG 2 cut(s) 593, 1329
Bpu1102I GCTNAGC 1 cut(s) 993
BpuMI CCSGG 3 cut(s) 566, 567, 643
BsaAI YACGTR 1 cut(s) 844
BsaHI GRCGYC 1 cut(s) 201
BsaI GGTCTC 2 cut(s) 969, 1229
BsaJI CCNNGG 5 cut(s) 165, 178, 564, 565, 1184
BsaWI WCCGGW 1 cut(s) 757
BsaXI ACNNNNNCTCC 8 cut(s) 452, 482, 966, 996, 1026, 1056, 1058, 1088
Bsc4I CCNNNNNNNGG 6 cut(s) 68, 184, 372, 571, 1063, 1141
Bse118I RCCGGY 1 cut(s) 61
Bse1I ACTGG 1 cut(s) 746
BseDI CCNNGG 5 cut(s) 165, 178, 564, 565, 1184
BseGI GGATG 8 cut(s) 120, 234, 387, 414, 515, 949, 1118, 1324
BseLI CCNNNNNNNGG 6 cut(s) 68, 184, 372, 571, 1063, 1141
BseMII CTCAG 4 cut(s) 210, 984, 1091, 1188
BseNI ACTGG 1 cut(s) 746
BseRI GAGGAG 2 cut(s) 77, 246
BseSI GKGCMC 2 cut(s) 1057, 1152
BseXI GCAGC 2 cut(s) 342, 1339
BseYI CCCAGC 1 cut(s) 183
Bsh1236I CGCG 1 cut(s) 1392
BshFI GGCC 4 cut(s) 72, 736, 1055, 1165
BsiHKAI GWGCWC 1 cut(s) 1215
BsiHKCI CYCGRG 1 cut(s) 565
BsiSI CCGG 4 cut(s) 62, 566, 642, 758
BslFI GGGAC 2 cut(s) 868, 1060
BslI CCNNNNNNNGG 6 cut(s) 68, 184, 372, 571, 1063, 1141
BsmAI GTCTC 3 cut(s) 472, 969, 1229
BsmFI GGGAC 2 cut(s) 868, 1060
BsnI GGCC 4 cut(s) 72, 736, 1055, 1165
Bso31I GGTCTC 2 cut(s) 969, 1229
BsoBI CYCGRG 1 cut(s) 565
Bsp120I GGGCCC 1 cut(s) 1053
Bsp1286I GDGCHC 3 cut(s) 1057, 1152, 1215
Bsp1407I TGTACA 1 cut(s) 633
Bsp143I GATC 6 cut(s) 187, 213, 837, 882, 1304, 1364
Bsp1720I GCTNAGC 1 cut(s) 993
BspACI CCGC 5 cut(s) 100, 111, 328, 342, 471
BspANI GGCC 4 cut(s) 72, 736, 1055, 1165
BspCNI CTCAG 4 cut(s) 209, 985, 1092, 1187
BspFNI CGCG 1 cut(s) 1392
BspLI GGNNCC 4 cut(s) 54, 142, 1055, 1056
BspPI GGATC 4 cut(s) 195, 208, 1312, 1372
BspTNI GGTCTC 2 cut(s) 969, 1229
BsrFI RCCGGY 1 cut(s) 61
BsrGI TGTACA 1 cut(s) 633
BsrI ACTGG 1 cut(s) 746
BssAI RCCGGY 1 cut(s) 61
BssECI CCNNGG 5 cut(s) 165, 178, 564, 565, 1184
BssMI GATC 6 cut(s) 187, 213, 837, 882, 1304, 1364
BssNI GRCGYC 1 cut(s) 201
BssSI CACGAG 1 cut(s) 1120
BssT1I CCWWGG 1 cut(s) 165
Bst2BI CACGAG 1 cut(s) 1120
Bst4CI ACNGT 5 cut(s) 158, 466, 618, 631, 1109
Bst6I CTCTTC 1 cut(s) 1008
BstACI GRCGYC 1 cut(s) 201
BstAUI TGTACA 1 cut(s) 633
BstBAI YACGTR 1 cut(s) 844
BstC8I GCNNGC 4 cut(s) 661, 795, 799, 894
BstDEI CTNAG 4 cut(s) 196, 993, 1100, 1174
BstDSI CCRYGG 1 cut(s) 178
BstEII GGTNACC 1 cut(s) 956
BstF5I GGATG 8 cut(s) 120, 234, 387, 414, 515, 949, 1118, 1324
BstFNI CGCG 1 cut(s) 1392
BstKTI GATC 6 cut(s) 190, 216, 840, 885, 1307, 1367
BstMAI GTCTC 3 cut(s) 472, 969, 1229
BstMBI GATC 6 cut(s) 187, 213, 837, 882, 1304, 1364
BstMWI GCNNNNNNNGC 1 cut(s) 1131
BstNSI RCATGY 2 cut(s) 867, 1161
BstPI GGTNACC 1 cut(s) 956
BstSCI CCNGG 3 cut(s) 564, 565, 641
BstSLI GKGCMC 2 cut(s) 1057, 1152
BstUI CGCG 1 cut(s) 1392
BstV1I GCAGC 2 cut(s) 342, 1339
BstV2I GAAGAC 2 cut(s) 475, 1395
BstX2I RGATCY 2 cut(s) 1304, 1364
BstXI CCANNNNNNTGG 1 cut(s) 425
BstYI RGATCY 2 cut(s) 1304, 1364
BsuRI GGCC 4 cut(s) 72, 736, 1055, 1165
BtgI CCRYGG 1 cut(s) 178
BtsCI GGATG 8 cut(s) 120, 234, 387, 414, 515, 949, 1118, 1324
BtsI GCAGTG 1 cut(s) 1044
BtsIMutI CAGTG 4 cut(s) 462, 636, 1044, 1105
Cac8I GCNNGC 4 cut(s) 661, 795, 799, 894
Cfr10I RCCGGY 1 cut(s) 61
Cfr13I GGNCC 4 cut(s) 169, 734, 1053, 1054
Cfr9I CCCGGG 1 cut(s) 565
Csp6I GTAC 4 cut(s) 533, 634, 755, 1009
CspCI CAANNNNNGTGG 2 cut(s) 360, 395
CviAII CATG 7 cut(s) 49, 224, 403, 864, 868, 1126, 1158
CviQI GTAC 4 cut(s) 533, 634, 755, 1009
DdeI CTNAG 4 cut(s) 196, 993, 1100, 1174
DpnI GATC 6 cut(s) 189, 215, 839, 884, 1306, 1366
DpnII GATC 6 cut(s) 187, 213, 837, 882, 1304, 1364
EaeI YGGCCR 1 cut(s) 1163
Eam1104I CTCTTC 1 cut(s) 1008
EarI CTCTTC 1 cut(s) 1008
EciI GGCGGA 2 cut(s) 100, 460
Eco130I CCWWGG 1 cut(s) 165
Eco24I GRGCYC 1 cut(s) 1057
Eco31I GGTCTC 2 cut(s) 969, 1229
Eco47I GGWCC 1 cut(s) 169
Eco88I CYCGRG 1 cut(s) 565
Eco91I GGTNACC 1 cut(s) 956
EcoO109I RGGNCCY 1 cut(s) 1054
EcoO65I GGTNACC 1 cut(s) 956
EcoT14I CCWWGG 1 cut(s) 165
EcoT22I ATGCAT 1 cut(s) 869
EcoT38I GRGCYC 1 cut(s) 1057
ErhI CCWWGG 1 cut(s) 165
FaeI CATG 7 cut(s) 52, 227, 406, 867, 871, 1129, 1161
FalI AAGNNNNNCTT 4 cut(s) 781, 813, 945, 977
FaqI GGGAC 2 cut(s) 868, 1060
FatI CATG 7 cut(s) 48, 223, 402, 863, 867, 1125, 1157
FauI CCCGC 1 cut(s) 107
Fnu4HI GCNGC 3 cut(s) 331, 342, 1353
FokI GGATG 8 cut(s) 107, 221, 374, 401, 522, 956, 1125, 1331
FriOI GRGCYC 1 cut(s) 1057
Fsp4HI GCNGC 3 cut(s) 331, 342, 1353
FspBI CTAG 1 cut(s) 359
GluI GCNGC 3 cut(s) 331, 342, 1353
GsaI CCCAGC 1 cut(s) 187
GsuI CTGGAG 2 cut(s) 593, 1329
HaeIII GGCC 4 cut(s) 72, 736, 1055, 1165
HapII CCGG 4 cut(s) 62, 566, 642, 758
Hin1I GRCGYC 1 cut(s) 201
Hin1II CATG 7 cut(s) 52, 227, 406, 867, 871, 1129, 1161
HincII GTYRAC 1 cut(s) 439
HindII GTYRAC 1 cut(s) 439
HinfI GANTC 5 cut(s) 174, 395, 446, 1102, 1385
HpaII CCGG 4 cut(s) 62, 566, 642, 758
HphI GGTGA 7 cut(s) 689, 719, 847, 968, 1213, 1288, 1414
Hpy166II GTNNAC 5 cut(s) 130, 178, 439, 515, 634
Hpy188I TCNGA 6 cut(s) 140, 173, 199, 1046, 1101, 1177
Hpy188III TCNNGA 5 cut(s) 541, 572, 598, 1001, 1308
Hpy8I GTNNAC 5 cut(s) 130, 178, 439, 515, 634
Hpy99I CGWCG 1 cut(s) 1270
HpyCH4III ACNGT 5 cut(s) 158, 466, 618, 631, 1109
HpyCH4IV ACGT 4 cut(s) 201, 305, 843, 1265
HpyCH4V TGCA 4 cut(s) 272, 867, 1125, 1171
HpyF10VI GCNNNNNNNGC 1 cut(s) 1131
HpyF3I CTNAG 4 cut(s) 196, 993, 1100, 1174
HpySE526I ACGT 4 cut(s) 201, 305, 843, 1265
Hsp92I GRCGYC 1 cut(s) 201
Hsp92II CATG 7 cut(s) 52, 227, 406, 867, 871, 1129, 1161
Kzo9I GATC 6 cut(s) 187, 213, 837, 882, 1304, 1364
LmnI GCTCC 3 cut(s) 90, 889, 1034
Lsp1109I GCAGC 2 cut(s) 342, 1339
LweI GCATC 2 cut(s) 934, 1158
MaeI CTAG 1 cut(s) 359
MaeII ACGT 4 cut(s) 201, 305, 843, 1265
MaeIII GTNAC 4 cut(s) 610, 956, 1103, 1201
MalI GATC 6 cut(s) 189, 215, 839, 884, 1306, 1366
MboI GATC 6 cut(s) 187, 213, 837, 882, 1304, 1364
MboII GAAGA 4 cut(s) 475, 1025, 1342, 1395
MfeI CAATTG 1 cut(s) 1061
MflI RGATCY 2 cut(s) 1304, 1364
MhlI GDGCHC 3 cut(s) 1057, 1152, 1215
MluCI AATT 3 cut(s) 504, 601, 1061
MlyI GAGTC 4 cut(s) 183, 389, 455, 1111
MmeI TCCRAC 3 cut(s) 33, 118, 885
Mph1103I ATGCAT 1 cut(s) 869
MslI CAYNNNNRTG 2 cut(s) 222, 932
MspI CCGG 4 cut(s) 62, 566, 642, 758
MspR9I CCNGG 3 cut(s) 566, 567, 643
MunI CAATTG 1 cut(s) 1061
MvnI CGCG 1 cut(s) 1392
MwoI GCNNNNNNNGC 1 cut(s) 1131
NciI CCSGG 3 cut(s) 566, 567, 643
NdeII GATC 6 cut(s) 187, 213, 837, 882, 1304, 1364
NlaIII CATG 7 cut(s) 52, 227, 406, 867, 871, 1129, 1161
NlaIV GGNNCC 4 cut(s) 54, 142, 1055, 1056
NmuCI GTSAC 3 cut(s) 956, 1103, 1201
NsiI ATGCAT 1 cut(s) 869
NspI RCATGY 2 cut(s) 867, 1161
PcsI WCGNNNNNNNCGW 1 cut(s) 441
PfeI GAWTC 1 cut(s) 1385
PfoI TCCNGGA 1 cut(s) 641
PkrI GCNGC 3 cut(s) 332, 343, 1354
PleI GAGTC 4 cut(s) 182, 389, 454, 1110
PpsI GAGTC 4 cut(s) 182, 389, 454, 1110
Ppu21I YACGTR 1 cut(s) 844
PsiI TTATAA 1 cut(s) 1232
PspEI GGTNACC 1 cut(s) 956
PspFI CCCAGC 1 cut(s) 183
PspN4I GGNNCC 4 cut(s) 54, 142, 1055, 1056
PspOMI GGGCCC 1 cut(s) 1053
PspPI GGNCC 4 cut(s) 169, 734, 1053, 1054
PsuI RGATCY 2 cut(s) 1304, 1364
RsaI GTAC 4 cut(s) 534, 635, 756, 1010
RsaNI GTAC 4 cut(s) 533, 634, 755, 1009
RseI CAYNNNNRTG 2 cut(s) 222, 932
SatI GCNGC 3 cut(s) 331, 342, 1353
Sau3AI GATC 6 cut(s) 187, 213, 837, 882, 1304, 1364
Sau96I GGNCC 4 cut(s) 169, 734, 1053, 1054
SchI GAGTC 4 cut(s) 183, 389, 455, 1111
ScrFI CCNGG 3 cut(s) 566, 567, 643
SduI GDGCHC 3 cut(s) 1057, 1152, 1215
SfaNI GCATC 2 cut(s) 934, 1158
SinI GGWCC 1 cut(s) 169
SmaI CCCGGG 1 cut(s) 567
SmiMI CAYNNNNRTG 2 cut(s) 222, 932
Sse9I AATT 3 cut(s) 504, 601, 1061
SsiI CCGC 5 cut(s) 100, 111, 328, 342, 471
SspMI CTAG 1 cut(s) 359
StyD4I CCNGG 3 cut(s) 564, 565, 641
StyI CCWWGG 1 cut(s) 165
TaaI ACNGT 5 cut(s) 158, 466, 618, 631, 1109
TaiI ACGT 4 cut(s) 204, 308, 846, 1268
TaqI TCGA 1 cut(s) 525
TasI AATT 3 cut(s) 504, 601, 1061
TatI WGTACW 1 cut(s) 633
TauI GCSGC 1 cut(s) 344
TfiI GAWTC 1 cut(s) 1385
TscAI CASTG 4 cut(s) 469, 636, 1044, 1112
TseFI GTSAC 3 cut(s) 956, 1103, 1201
TseI GCWGC 2 cut(s) 330, 1352
Tsp45I GTSAC 3 cut(s) 956, 1103, 1201
TspDTI ATGAA 5 cut(s) 48, 220, 636, 916, 955
TspGWI ACGGA 2 cut(s) 400, 987
TspMI CCCGGG 1 cut(s) 565
TspRI CASTG 4 cut(s) 469, 636, 1044, 1112
VpaK11BI GGWCC 1 cut(s) 169
XapI RAATTY 1 cut(s) 601
XceI RCATGY 2 cut(s) 867, 1161
XcmI CCANNNNNNNNNTGG 1 cut(s) 568
XmaI CCCGGG 1 cut(s) 565
XspI CTAG 1 cut(s) 359
ZraI GACGTC 1 cut(s) 202
Zsp2I ATGCAT 1 cut(s) 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.