Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0013375

Physical Location & Seq

Genomic Coordinates Forward (+)

19484565 .. 19488192

Gene Structure 3628 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1165500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1257 bp

ATGGCGATTCAAAAACCCTTTTGCAAAACCCAATTCTCCGTTTTTCTGCTAGTCCTAGCCAATGTGGCTGTTTTTGTCACCTCCAAGTCGACAATCGAGCCCTGCTCGAACGCCGACTCGTGCAATGCCTTGCTCGGCTACACCGTCTACACCGAGCTCAAGGTCTCAGAGGTCGCCTCCCTCTTCCAGGTTGACCCAATTGCTCTCCTCACCGCCAATGCCATCGACATTTCGTACCCCGACGTCGAAAACCACATCCTCCCCTCCCAGCTCTTCCTCAAAGTCCCAATCATCTGCTCCTGCGTCGACGGGATTCGAAAGTCAGTGTCTACCCACTACAAGACCCGGTCTTCCGACACGCTGGCCTCCATTGCTGATTCGGTGTACTCTGGCTTGGTATCGGATGACCAGATTCGGGAGGCCAATTCGATTTCGGACCCTTCTGTGCTCGACGTGGGGCAAACCCTTGTGGTGCCTCTGCCCTGCACTTGTTTCAATGGGACTGATAATTCGCTGCCGGCTATCTACTTGTCTTATGTGGTGAACCCGGAGGACACACTGGCGGGGATTGCCGCCCGGTACTCGACTACCCTCACCGATTTGATGAATGTGAATGCCATGGGGAACACAGCTATTAAGGCTGCTGATATACTTGCAGTGCCATTGCCAGCTTGTGCATCAAACTTTCCTAAATCTGCTCAAGACTATGGCTTGATCGTGCCCAATGGTAGCTATGCCATTACAGCAAGCCACTGTTTGCAATGCAGTTGTGGGCCTGGGAGTCTCAATTTGTACTGCCAGCCTGCTTCATTAGCAGTTTCATGTTCGAGCATGCAATGTAGAAACAGTAACCTCATGGTCGGGAACGTTACAGTTCAGCAGAGTGGTGGTGGTTGCAATGTCACTTCTTGTAACTATGGTGGTTTTGTGAATGGAAGCATCGTCTCAACGTTGTCTACATCTCTTCAGCCCCGTTGCCCAGGTCCACAGAAATTTCCACCACTTATAGCCCCACCTACCTCAGTAATCCGTGACACAATGTTTGCACCCGCACCTGCTCCCGAGTCAGATGGTTCTATTGGTGGGATACCCAAGTCACCTTCAGTGTTACCCGGGGTGCTTCCAGCAGGATTGCCCCCTATAGGTGGCCCTGCTGGGATTGCTTCTGATGCCTGCTCACTGATCAATCCATTGGGCAATTTCCCAACCGCGGTTCTGCTACTTTTGTATGTCAAGTTCATGATTGCCATCTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005488 GO:0005539 GO:0005575 GO:0005623 GO:0005886 GO:0006955 GO:0008150 GO:0016020 GO:0031224 GO:0031225 GO:0031226 GO:0042834 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0050896 GO:0071944 GO:0097367

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM

Protein Analysis

419

Amino Acids

43.48

Weight (kDa)

4.9

Isoelectric Point (pI)

39.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM2_CERK1_LYK3_4_5	PF23472	111 - 160	1.1e-07	LYK3/4/5 LysM2 domain
LysM	PF01476	113 - 159	9e-08	LysM domain
LysM	PF01476	179 - 221	7.9e-08	LysM domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21880 AT1G21880
fragaria_vesca	FvH4_2g26750
malus_domestica	MD08G1165500.v1.1 MD15G1351200.v1.1
prunus_persica	Prupe.1G500000_v2.0.a1
pyrus_communis	pycom12654g00100
rosa_chinensis	RchiOBHm_Chr6g0295631
rosa_laevigata	RLG00000011781
rosa_multiflora	Rmu_sc0005000.1_g000002 Rmu_sc0006802.1_g000011
rosa_roxburghii	Rroxscaffold_7G00172300
rosa_rugosa	Rorug06G0253000
rosa_samantha	Rh6AG366000 Rh6BG374100 Rh6CG380400 Rh6DG367200
rosa_wichuraiana	Rw6G031940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1063
AatII	GACGTC	1 cut(s)	246
Acc36I	ACCTGC	1 cut(s)	1063
AccB1I	GGYRCC	1 cut(s)	472
AccI	GTMKAC	5 cut(s)	89, 147, 306, 329, 956
AccII	CGCG	1 cut(s)	1211
AciI	CCGC	6 cut(s)	213, 563, 573, 1050, 1209, 1211
AclI	AACGTT	2 cut(s)	867, 950
AcsI	RAATTY	1 cut(s)	992
AcuI	CTGAAG	2 cut(s)	950, 1086
AcyI	GRCGYC	1 cut(s)	243
AfaI	GTAC	4 cut(s)	236, 386, 581, 794
AfiI	CCNNNNNNNGG	5 cut(s)	187, 415, 1142, 1145, 1210
AgsI	TTSAA	2 cut(s)	11, 496
AjiI	CACGTC	1 cut(s)	454
AjnI	CCWGG	3 cut(s)	186, 775, 979
AluBI	AGCT	5 cut(s)	157, 271, 632, 671, 732
AluI	AGCT	5 cut(s)	157, 271, 632, 671, 732
Alw21I	GWGCWC	2 cut(s)	159, 450
Alw26I	GTCTC	3 cut(s)	169, 788, 949
Ama87I	CYCGRG	2 cut(s)	1061, 1112
AoxI	GGCC	4 cut(s)	363, 420, 773, 1147
ApeKI	GCWGC	2 cut(s)	514, 641
ApoI	RAATTY	1 cut(s)	992
ArsI	GACNNNNNNTTYG	4 cut(s)	493, 525, 1025, 1057
AspS9I	GGNCC	4 cut(s)	436, 773, 983, 1148
AsuC2I	CCSGG	5 cut(s)	346, 548, 577, 1113, 1114
AsuHPI	GGTGA	5 cut(s)	70, 202, 553, 586, 1089
AsuII	TTCGAA	1 cut(s)	316
AvaI	CYCGRG	2 cut(s)	1061, 1112
AvaII	GGWCC	2 cut(s)	436, 983
BaeGI	GKGCMC	1 cut(s)	723
BaeI	ACNNNNGTAYC	2 cut(s)	1079, 1112
BanI	GGYRCC	1 cut(s)	472
BanII	GRGCYC	2 cut(s)	102, 159
BauI	CACGAG	1 cut(s)	118
BbsI	GAAGAC	1 cut(s)	342
Bbv12I	GWGCWC	2 cut(s)	159, 450
BbvI	GCAGC	2 cut(s)	501, 628
BccI	CCATC	3 cut(s)	230, 1064, 1256
BciT130I	CCWGG	3 cut(s)	188, 777, 981
BciVI	GTATCC	1 cut(s)	1080
BclI	TGATCA	1 cut(s)	1182
BcnI	CCSGG	5 cut(s)	346, 548, 577, 1113, 1114
BcoDI	GTCTC	3 cut(s)	169, 788, 949
BfaI	CTAG	2 cut(s)	50, 56
BfmI	CTRYAG	1 cut(s)	1140
BfuAI	ACCTGC	1 cut(s)	1063
BfuI	GTATCC	1 cut(s)	1080
BglI	GCCNNNNNGGC	1 cut(s)	65
BisI	GCNGC	3 cut(s)	515, 573, 642
BlsI	GCNGC	3 cut(s)	516, 574, 643
Bme1390I	CCNGG	8 cut(s)	188, 346, 548, 577, 777, 981, 1113, 1114
Bme18I	GGWCC	2 cut(s)	436, 983
BmeT110I	CYCGRG	2 cut(s)	1061, 1112
BmgBI	CACGTC	1 cut(s)	454
BmgT120I	GGNCC	4 cut(s)	436, 773, 983, 1148
BmiI	GGNNCC	2 cut(s)	438, 474
BmrFI	CCNGG	8 cut(s)	188, 346, 548, 577, 777, 981, 1113, 1114
BmsI	GCATC	3 cut(s)	686, 948, 1159
BpiI	GAAGAC	1 cut(s)	342
BplI	GAGNNNNNCTC	4 cut(s)	89, 121, 161, 193
Bpu14I	TTCGAA	1 cut(s)	316
BpuEI	CTTGAG	2 cut(s)	143, 684
BpuMI	CCSGG	5 cut(s)	346, 548, 577, 1113, 1114
BsaBI	GATNNNNATC	1 cut(s)	1247
BsaHI	GRCGYC	1 cut(s)	243
BsaI	GGTCTC	1 cut(s)	169
BsaJI	CCNNGG	6 cut(s)	618, 776, 979, 1112, 1113, 1209
Bsc4I	CCNNNNNNNGG	5 cut(s)	187, 415, 1142, 1145, 1210
Bse118I	RCCGGY	1 cut(s)	517
Bse1I	ACTGG	1 cut(s)	564
Bse3DI	GCAATG	6 cut(s)	130, 369, 662, 767, 842, 904
Bse8I	GATNNNNATC	1 cut(s)	1247
BseBI	CCWGG	3 cut(s)	188, 777, 981
BseDI	CCNNGG	6 cut(s)	618, 776, 979, 1112, 1113, 1209
BseGI	GGATG	2 cut(s)	255, 409
BseJI	GATNNNNATC	1 cut(s)	1247
BseLI	CCNNNNNNNGG	5 cut(s)	187, 415, 1142, 1145, 1210
BseMI	GCAATG	6 cut(s)	130, 369, 662, 767, 842, 904
BseMII	CTCAG	2 cut(s)	180, 1035
BseNI	ACTGG	1 cut(s)	564
BseRI	GAGGAG	1 cut(s)	197
BseSI	GKGCMC	1 cut(s)	723
BseXI	GCAGC	2 cut(s)	501, 628
BseYI	CCCAGC	2 cut(s)	267, 1154
BsgI	GTGCAG	1 cut(s)	469
Bsh1236I	CGCG	1 cut(s)	1211
BshFI	GGCC	4 cut(s)	365, 422, 775, 1149
BshNI	GGYRCC	1 cut(s)	472
BsiHKAI	GWGCWC	2 cut(s)	159, 450
BsiHKCI	CYCGRG	2 cut(s)	1061, 1112
BsiSI	CCGG	5 cut(s)	346, 518, 548, 577, 1113
BslFI	GGGAC	2 cut(s)	269, 514
BslI	CCNNNNNNNGG	5 cut(s)	187, 415, 1142, 1145, 1210
BsmAI	GTCTC	3 cut(s)	169, 788, 949
BsmBI	CGTCTC	1 cut(s)	949
BsmFI	GGGAC	2 cut(s)	269, 514
BsmI	GAATGC	1 cut(s)	619
BsnI	GGCC	4 cut(s)	365, 422, 775, 1149
Bso31I	GGTCTC	1 cut(s)	169
BsoBI	CYCGRG	2 cut(s)	1061, 1112
Bsp119I	TTCGAA	1 cut(s)	316
Bsp1286I	GDGCHC	4 cut(s)	102, 159, 450, 723
Bsp143I	GATC	2 cut(s)	714, 1182
Bsp19I	CCATGG	1 cut(s)	618
BspACI	CCGC	6 cut(s)	213, 563, 573, 1050, 1209, 1211
BspANI	GGCC	4 cut(s)	365, 422, 775, 1149
BspCNI	CTCAG	2 cut(s)	179, 1034
BspFNI	CGCG	1 cut(s)	1211
BspHI	TCATGA	1 cut(s)	1239
BspLI	GGNNCC	2 cut(s)	438, 474
BspMI	ACCTGC	1 cut(s)	1063
BspQI	GCTCTTC	1 cut(s)	278
BspT104I	TTCGAA	1 cut(s)	316
BspT107I	GGYRCC	1 cut(s)	472
BspTNI	GGTCTC	1 cut(s)	169
BsrDI	GCAATG	6 cut(s)	130, 369, 662, 767, 842, 904
BsrFI	RCCGGY	1 cut(s)	517
BsrI	ACTGG	1 cut(s)	564
BssAI	RCCGGY	1 cut(s)	517
BssECI	CCNNGG	6 cut(s)	618, 776, 979, 1112, 1113, 1209
BssMI	GATC	2 cut(s)	714, 1182
BssNI	GRCGYC	1 cut(s)	243
BssSI	CACGAG	1 cut(s)	118
BssT1I	CCWWGG	1 cut(s)	618
Bst2BI	CACGAG	1 cut(s)	118
Bst2UI	CCWGG	3 cut(s)	188, 777, 981
Bst4CI	ACNGT	4 cut(s)	145, 755, 848, 874
Bst6I	CTCTTC	3 cut(s)	188, 278, 969
BstACI	GRCGYC	1 cut(s)	243
BstBI	TTCGAA	1 cut(s)	316
BstC8I	GCNNGC	8 cut(s)	363, 519, 669, 748, 800, 804, 833, 1174
BstDEI	CTNAG	2 cut(s)	166, 1021
BstDSI	CCRYGG	2 cut(s)	618, 1209
BstENI	CCTNNNNNAGG	1 cut(s)	185
BstF5I	GGATG	2 cut(s)	255, 409
BstFNI	CGCG	1 cut(s)	1211
BstKTI	GATC	2 cut(s)	717, 1185
BstMAI	GTCTC	3 cut(s)	169, 788, 949
BstMBI	GATC	2 cut(s)	714, 1182
BstMWI	GCNNNNNNNGC	8 cut(s)	65, 371, 569, 638, 743, 812, 1160, 1169
BstNI	CCWGG	3 cut(s)	188, 777, 981
BstNSI	RCATGY	1 cut(s)	835
BstSCI	CCNGG	8 cut(s)	186, 344, 546, 575, 775, 979, 1111, 1112
BstSFI	CTRYAG	1 cut(s)	1140
BstSLI	GKGCMC	1 cut(s)	723
BstUI	CGCG	1 cut(s)	1211
BstV1I	GCAGC	2 cut(s)	501, 628
BstV2I	GAAGAC	1 cut(s)	342
BsuI	GTATCC	1 cut(s)	1080
BsuRI	GGCC	4 cut(s)	365, 422, 775, 1149
BtgI	CCRYGG	2 cut(s)	618, 1209
BtrI	CACGTC	1 cut(s)	454
BtsCI	GGATG	2 cut(s)	255, 409
BtsI	GCAGTG	1 cut(s)	663
BtsIMutI	CAGTG	6 cut(s)	330, 557, 663, 751, 1110, 1178
BveI	ACCTGC	1 cut(s)	1063
Cac8I	GCNNGC	8 cut(s)	363, 519, 669, 748, 800, 804, 833, 1174
CciI	TCATGA	1 cut(s)	1239
Cfr10I	RCCGGY	1 cut(s)	517
Cfr13I	GGNCC	4 cut(s)	436, 773, 983, 1148
Cfr42I	CCGCGG	1 cut(s)	1212
Cfr9I	CCCGGG	1 cut(s)	1112
CseI	GACGC	1 cut(s)	292
Csp6I	GTAC	4 cut(s)	235, 385, 580, 793
CviAII	CATG	5 cut(s)	619, 822, 832, 856, 1240
CviQI	GTAC	4 cut(s)	235, 385, 580, 793
DdeI	CTNAG	2 cut(s)	166, 1021
DpnI	GATC	2 cut(s)	716, 1184
DpnII	GATC	2 cut(s)	714, 1182
Eam1104I	CTCTTC	3 cut(s)	188, 278, 969
EarI	CTCTTC	3 cut(s)	188, 278, 969
Ecl136II	GAGCTC	1 cut(s)	157
Eco130I	CCWWGG	1 cut(s)	618
Eco24I	GRGCYC	2 cut(s)	102, 159
Eco31I	GGTCTC	1 cut(s)	169
Eco47I	GGWCC	2 cut(s)	436, 983
Eco53kI	GAGCTC	1 cut(s)	157
Eco57I	CTGAAG	2 cut(s)	950, 1086
Eco88I	CYCGRG	2 cut(s)	1061, 1112
EcoICRI	GAGCTC	1 cut(s)	157
EcoNI	CCTNNNNNAGG	1 cut(s)	185
EcoRII	CCWGG	3 cut(s)	186, 775, 979
EcoT14I	CCWWGG	1 cut(s)	618
EcoT38I	GRGCYC	2 cut(s)	102, 159
ErhI	CCWWGG	1 cut(s)	618
Esp3I	CGTCTC	1 cut(s)	949
FaeI	CATG	5 cut(s)	622, 825, 835, 859, 1243
FaqI	GGGAC	2 cut(s)	269, 514
FatI	CATG	5 cut(s)	618, 821, 831, 855, 1239
FauI	CCCGC	2 cut(s)	556, 1057
FbaI	TGATCA	1 cut(s)	1182
FblI	GTMKAC	5 cut(s)	89, 147, 306, 329, 956
Fnu4HI	GCNGC	3 cut(s)	515, 573, 642
FokI	GGATG	2 cut(s)	242, 416
FriOI	GRGCYC	2 cut(s)	102, 159
Fsp4HI	GCNGC	3 cut(s)	515, 573, 642
FspBI	CTAG	2 cut(s)	50, 56
GluI	GCNGC	3 cut(s)	515, 573, 642
GsaI	CCCAGC	2 cut(s)	271, 1158
HaeIII	GGCC	4 cut(s)	365, 422, 775, 1149
HapII	CCGG	5 cut(s)	346, 518, 548, 577, 1113
HgaI	GACGC	1 cut(s)	292
Hin1I	GRCGYC	1 cut(s)	243
Hin1II	CATG	5 cut(s)	622, 825, 835, 859, 1243
HincII	GTYRAC	3 cut(s)	90, 193, 307
HindII	GTYRAC	3 cut(s)	90, 193, 307
HinfI	GANTC	7 cut(s)	7, 116, 313, 377, 412, 781, 1064
HpaII	CCGG	5 cut(s)	346, 518, 548, 577, 1113
HphI	GGTGA	5 cut(s)	70, 202, 553, 586, 1089
Hpy166II	GTNNAC	9 cut(s)	90, 148, 193, 307, 330, 385, 544, 957, 986
Hpy188I	TCNGA	6 cut(s)	169, 355, 403, 436, 1069, 1168
Hpy188III	TCNNGA	5 cut(s)	416, 701, 862, 1061, 1240
Hpy8I	GTNNAC	9 cut(s)	90, 148, 193, 307, 330, 385, 544, 957, 986
Hpy99I	CGWCG	5 cut(s)	245, 248, 308, 311, 455
HpyAV	CCTTC	2 cut(s)	450, 1110
HpyCH4III	ACNGT	4 cut(s)	145, 755, 848, 874
HpyCH4IV	ACGT	4 cut(s)	243, 453, 867, 950
HpyF10VI	GCNNNNNNNGC	8 cut(s)	65, 371, 569, 638, 743, 812, 1160, 1169
HpyF3I	CTNAG	2 cut(s)	166, 1021
HpySE526I	ACGT	4 cut(s)	243, 453, 867, 950
Hsp92I	GRCGYC	1 cut(s)	243
Hsp92II	CATG	5 cut(s)	622, 825, 835, 859, 1243
KroI	GCCGGC	1 cut(s)	517
KroNI	GCCGGC	1 cut(s)	519
Ksp22I	TGATCA	1 cut(s)	1182
KspI	CCGCGG	1 cut(s)	1212
Kzo9I	GATC	2 cut(s)	714, 1182
LguI	GCTCTTC	1 cut(s)	278
LmnI	GCTCC	2 cut(s)	302, 1063
Lsp1109I	GCAGC	2 cut(s)	501, 628
LweI	GCATC	3 cut(s)	686, 948, 1159
MaeI	CTAG	2 cut(s)	50, 56
MaeII	ACGT	4 cut(s)	243, 453, 867, 950
MaeIII	GTNAC	8 cut(s)	76, 848, 868, 901, 911, 1031, 1095, 1107
MalI	GATC	2 cut(s)	716, 1184
MboI	GATC	2 cut(s)	714, 1182
MboII	GAAGA	4 cut(s)	175, 265, 342, 956
MfeI	CAATTG	1 cut(s)	198
MhlI	GDGCHC	4 cut(s)	102, 159, 450, 723
MluCI	AATT	7 cut(s)	32, 198, 424, 508, 787, 992, 1198
MlyI	GAGTC	3 cut(s)	110, 790, 1073
MmeI	TCCRAC	1 cut(s)	378
MroNI	GCCGGC	1 cut(s)	517
MseI	TTAA	1 cut(s)	636
MspA1I	CMGCKG	1 cut(s)	1211
MspI	CCGG	5 cut(s)	346, 518, 548, 577, 1113
MspR9I	CCNGG	8 cut(s)	188, 346, 548, 577, 777, 981, 1113, 1114
MunI	CAATTG	1 cut(s)	198
Mva1269I	GAATGC	1 cut(s)	619
MvaI	CCWGG	3 cut(s)	188, 777, 981
MvnI	CGCG	1 cut(s)	1211
MwoI	GCNNNNNNNGC	8 cut(s)	65, 371, 569, 638, 743, 812, 1160, 1169
NaeI	GCCGGC	1 cut(s)	519
NciI	CCSGG	5 cut(s)	346, 548, 577, 1113, 1114
NcoI	CCATGG	1 cut(s)	618
NdeII	GATC	2 cut(s)	714, 1182
NgoMIV	GCCGGC	1 cut(s)	517
NlaIII	CATG	5 cut(s)	622, 825, 835, 859, 1243
NlaIV	GGNNCC	2 cut(s)	438, 474
NmeAIII	GCCGAG	1 cut(s)	114
NmuCI	GTSAC	4 cut(s)	76, 901, 1031, 1095
NspI	RCATGY	1 cut(s)	835
NspV	TTCGAA	1 cut(s)	316
PaeI	GCATGC	1 cut(s)	835
PagI	TCATGA	1 cut(s)	1239
PaqCI	CACCTGC	1 cut(s)	1063
PciSI	GCTCTTC	1 cut(s)	278
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	1 cut(s)	619
PdiI	GCCGGC	1 cut(s)	519
PfeI	GAWTC	4 cut(s)	7, 313, 377, 412
PflFI	GACNNNGTC	1 cut(s)	346
PkrI	GCNGC	3 cut(s)	516, 574, 643
PleI	GAGTC	3 cut(s)	110, 789, 1072
PpsI	GAGTC	3 cut(s)	110, 789, 1072
Psp124BI	GAGCTC	1 cut(s)	159
Psp1406I	AACGTT	2 cut(s)	867, 950
Psp6I	CCWGG	3 cut(s)	186, 775, 979
PspFI	CCCAGC	2 cut(s)	267, 1154
PspGI	CCWGG	3 cut(s)	186, 775, 979
PspN4I	GGNNCC	2 cut(s)	438, 474
PspPI	GGNCC	4 cut(s)	436, 773, 983, 1148
PsrI	GAACNNNNNNTAC	2 cut(s)	1220, 1252
PsyI	GACNNNGTC	1 cut(s)	346
RsaI	GTAC	4 cut(s)	236, 386, 581, 794
RsaNI	GTAC	4 cut(s)	235, 385, 580, 793
SacI	GAGCTC	1 cut(s)	159
SacII	CCGCGG	1 cut(s)	1212
SalI	GTCGAC	2 cut(s)	88, 305
SapI	GCTCTTC	1 cut(s)	278
SaqAI	TTAA	1 cut(s)	636
SatI	GCNGC	3 cut(s)	515, 573, 642
Sau3AI	GATC	2 cut(s)	714, 1182
Sau96I	GGNCC	4 cut(s)	436, 773, 983, 1148
SchI	GAGTC	3 cut(s)	110, 790, 1073
ScrFI	CCNGG	8 cut(s)	188, 346, 548, 577, 777, 981, 1113, 1114
SduI	GDGCHC	4 cut(s)	102, 159, 450, 723
SfaNI	GCATC	3 cut(s)	686, 948, 1159
SfcI	CTRYAG	1 cut(s)	1140
Sfr303I	CCGCGG	1 cut(s)	1212
SfuI	TTCGAA	1 cut(s)	316
SgrBI	CCGCGG	1 cut(s)	1212
SgrDI	CGTCGACG	1 cut(s)	305
SinI	GGWCC	2 cut(s)	436, 983
SmaI	CCCGGG	1 cut(s)	1114
SmlI	CTYRAG	2 cut(s)	158, 699
SmoI	CTYRAG	2 cut(s)	158, 699
SphI	GCATGC	1 cut(s)	835
Sse9I	AATT	7 cut(s)	32, 198, 424, 508, 787, 992, 1198
SsiI	CCGC	6 cut(s)	213, 563, 573, 1050, 1209, 1211
SspMI	CTAG	2 cut(s)	50, 56
SstI	GAGCTC	1 cut(s)	159
StyD4I	CCNGG	8 cut(s)	186, 344, 546, 575, 775, 979, 1111, 1112
StyI	CCWWGG	1 cut(s)	618
TaaI	ACNGT	4 cut(s)	145, 755, 848, 874
TaiI	ACGT	4 cut(s)	246, 456, 870, 953
TasI	AATT	7 cut(s)	32, 198, 424, 508, 787, 992, 1198
TatI	WGTACW	2 cut(s)	384, 792
TauI	GCSGC	1 cut(s)	575
TfiI	GAWTC	4 cut(s)	7, 313, 377, 412
Tru1I	TTAA	1 cut(s)	636
Tru9I	TTAA	1 cut(s)	636
TscAI	CASTG	6 cut(s)	330, 564, 663, 758, 1110, 1185
TseFI	GTSAC	4 cut(s)	76, 901, 1031, 1095
TseI	GCWGC	2 cut(s)	514, 641
Tsp45I	GTSAC	4 cut(s)	76, 901, 1031, 1095
TspDTI	ATGAA	4 cut(s)	620, 798, 810, 1228
TspGWI	ACGGA	2 cut(s)	28, 1019
TspMI	CCCGGG	1 cut(s)	1112
TspRI	CASTG	6 cut(s)	330, 564, 663, 758, 1110, 1185
Tth111I	GACNNNGTC	1 cut(s)	346
VpaK11BI	GGWCC	2 cut(s)	436, 983
XagI	CCTNNNNNAGG	1 cut(s)	185
XapI	RAATTY	1 cut(s)	992
XceI	RCATGY	1 cut(s)	835
XmaI	CCCGGG	1 cut(s)	1112
XmiI	GTMKAC	5 cut(s)	89, 147, 306, 329, 956
XspI	CTAG	2 cut(s)	50, 56
ZraI	GACGTC	1 cut(s)	244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.