Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0013375

Physical Location & Seq

Genomic Coordinates Reverse (-)

56668287 .. 56671303

Gene Structure 3017 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG380400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGCAGCACCCAAAACCCTCTTACAAAACCCAGTCCTTCATTTTTTTCCTCTGGGTTTTAAGCAATGTACTTGTTCTCGCGACCTCAAAGTCCACAATCGAGCCCTGCTCGAACTCCGACTCCTGCAACGCTATGCTCGGCTACAAGGTCTACACCGAGCTCAAGGTCTCCGAAGTAGCTTCCCTCTTCCAGGTCGACCCCATCTCTATCCTCACCGCCAATGCCATCGACATTTCGTACCCCGACGTCGAAAACCACATTCTGCCCTCCGACCTCTTCCTCAAAATCCCAATCAACTGTTCCTGCGTCGACGGAATCCGAAAATCGGTGTCGACCCACTACAAGACCCGGCCCTCCGACACCTTGGCCTCCATTGCCGACTCGGTCTACTCCGGTTTGGTGTCGGCGGACCAGATTCGGGAGGCTAATTCGATTTCGGACCCATCGGTGCTGGATGTGGGACAGACGCTTGTGGTGCCTCTGCCGTGTACTTGCTTCAATGGGACGGATAATTCGTTGCCGGCGATTTACTTGTCGTATGTGGTGACCCCGGAGGACTCGCTGGCGGGGATTGCGGCCAGGTATTCGACTACGCTGACGGATTTGATGAATGTTAATGCCATGGGGAGCTCGGCTGTTAGGGCTTCTGATATTATTTCAATTCCATTGCCTGCCTGTGCATCAAACTTTCCTAGCTATGCCGCAGATCACGGCTTGATTGTGCCCAACGGGAGCTATGCCATTACAGCAAGTCACTGCCTTCAATGCAGTTGTGGTCCTGGGAGTCTAAATTTGTACTGTGAGCCTGCTTCATTAGCAGTTTCGTGTTCAAGCATGCAATGTAAAAACAGTAACCTCATGGTGGGCAACATCACAGCGCAGCAAACTAGTGCTGGTTGCAATGTTAGTTCTTGCAACTATGGTGGTTTCGTGAATGGCTCCATAATCACGACGTTGTCCACATCTCTTCGGCCTCGCTGCCCAGGACCACAACAATTTCCACCGCTCAAAGCCCCACCCACTTCAGTAATCCGGGATGCAACATTTGCACCAGCACCCGCACCCCAGTCTGATGGCTCAATAGCAGGAGCACCCCAGTCTACGGTGCCTTCAACGACATCCAGTTCACTTCCAGGATTAGCGCCCATAGGTGGTCCTTCCGGGAGTTCTTCTGCTGCTTGCTCCTTGGTTACGCCATTGACCAATTTGCCAAGTGTAGTTTTGTTACTCTTGTGTGTCAAGTTCATGATGGCCATCTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005488 GO:0005539 GO:0005575 GO:0005623 GO:0005886 GO:0006955 GO:0008150 GO:0016020 GO:0031224 GO:0031225 GO:0031226 GO:0042834 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0050896 GO:0071944 GO:0097367

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM

Protein Analysis

420

Amino Acids

43.76

Weight (kDa)

5.29

Isoelectric Point (pI)

44.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM2_CERK1_LYK3_4_5	PF23472	112 - 161	5.6e-08	LYK3/4/5 LysM2 domain
LysM	PF01476	114 - 160	2.1e-09	LysM domain
LysM	PF01476	180 - 222	3e-07	LysM domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21880 AT1G21880
fragaria_vesca	FvH4_2g26750
malus_domestica	MD08G1165500.v1.1 MD15G1351200.v1.1
prunus_persica	Prupe.1G500000_v2.0.a1
pyrus_communis	pycom12654g00100
rosa_chinensis	RchiOBHm_Chr6g0295631
rosa_laevigata	RLG00000011781
rosa_multiflora	Rmu_sc0005000.1_g000002 Rmu_sc0006802.1_g000011
rosa_roxburghii	Rroxscaffold_7G00172300
rosa_rugosa	Rorug06G0253000
rosa_samantha	Rh6AG366000 Rh6BG374100 Rh6CG380400 Rh6DG367200
rosa_wichuraiana	Rw6G031940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	88
AatII	GACGTC	1 cut(s)	249
AccB1I	GGYRCC	2 cut(s)	475, 1105
AccBSI	CCGCTC	1 cut(s)	1006
AccI	GTMKAC	6 cut(s)	150, 195, 309, 332, 387, 1100
AccII	CGCG	1 cut(s)	80
AciI	CCGC	7 cut(s)	216, 407, 566, 575, 702, 1004, 1059
AcoI	YGGCCR	2 cut(s)	576, 1251
AcsI	RAATTY	1 cut(s)	790
AcuI	CTGAAG	1 cut(s)	1008
AcyI	GRCGYC	1 cut(s)	246
AfaI	GTAC	4 cut(s)	69, 239, 490, 797
AfiI	CCNNNNNNNGG	6 cut(s)	190, 325, 418, 862, 1102, 1151
AgsI	TTSAA	5 cut(s)	499, 660, 764, 831, 1113
AhlI	ACTAGT	1 cut(s)	887
AjnI	CCWGG	5 cut(s)	189, 578, 778, 982, 1132
AjuI	GAANNNNNNNTTGG	2 cut(s)	283, 315
AloI	GAACNNNNNNTCC	2 cut(s)	104, 136
AluBI	AGCT	5 cut(s)	160, 179, 630, 696, 735
AluI	AGCT	5 cut(s)	160, 179, 630, 696, 735
Alw21I	GWGCWC	3 cut(s)	162, 632, 1093
Alw26I	GTCTC	1 cut(s)	172
AoxI	GGCC	5 cut(s)	350, 366, 576, 971, 1251
ApeKI	GCWGC	4 cut(s)	4, 880, 978, 1175
ApoI	RAATTY	1 cut(s)	790
ArsI	GACNNNNNNTTYG	2 cut(s)	496, 528
AspLEI	GCGC	2 cut(s)	880, 1144
AspS9I	GGNCC	6 cut(s)	351, 409, 439, 776, 986, 1154
AsuC2I	CCSGG	4 cut(s)	349, 551, 1034, 1162
AsuHPI	GGTGA	2 cut(s)	205, 556
AvaII	GGWCC	5 cut(s)	409, 439, 776, 986, 1154
BaeGI	GKGCMC	1 cut(s)	726
BalI	TGGCCA	1 cut(s)	1253
BanI	GGYRCC	2 cut(s)	475, 1105
BanII	GRGCYC	3 cut(s)	105, 162, 632
Bbv12I	GWGCWC	3 cut(s)	162, 632, 1093
BbvI	GCAGC	4 cut(s)	16, 892, 965, 1162
BccI	CCATC	6 cut(s)	209, 233, 451, 1067, 1243, 1262
BceAI	ACGGC	2 cut(s)	469, 727
BciT130I	CCWGG	5 cut(s)	191, 580, 780, 984, 1134
BcnI	CCSGG	4 cut(s)	349, 551, 1034, 1162
BcoDI	GTCTC	1 cut(s)	172
BcuI	ACTAGT	1 cut(s)	887
BfaI	CTAG	2 cut(s)	693, 888
BfoI	RGCGCY	1 cut(s)	1145
BisI	GCNGC	6 cut(s)	5, 576, 702, 881, 979, 1176
BlsI	GCNGC	6 cut(s)	6, 577, 703, 882, 980, 1177
Bme1390I	CCNGG	9 cut(s)	191, 349, 551, 580, 780, 984, 1034, 1134, 1162
Bme18I	GGWCC	5 cut(s)	409, 439, 776, 986, 1154
BmgT120I	GGNCC	6 cut(s)	351, 409, 439, 776, 986, 1154
BmiI	GGNNCC	4 cut(s)	441, 477, 940, 1107
BmrFI	CCNGG	9 cut(s)	191, 349, 551, 580, 780, 984, 1034, 1134, 1162
BmrI	ACTGGG	3 cut(s)	25, 1060, 1090
BmsI	GCATC	2 cut(s)	689, 1027
BmuI	ACTGGG	3 cut(s)	25, 1060, 1090
BplI	GAGNNNNNCTC	2 cut(s)	92, 124
BpuEI	CTTGAG	1 cut(s)	146
BpuMI	CCSGG	4 cut(s)	349, 551, 1034, 1162
BsaBI	GATNNNNATC	1 cut(s)	1253
BsaHI	GRCGYC	1 cut(s)	246
BsaI	GGTCTC	1 cut(s)	172
BsaJI	CCNNGG	6 cut(s)	363, 549, 621, 779, 982, 1185
BsaWI	WCCGGW	1 cut(s)	392
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	6 cut(s)	190, 325, 418, 862, 1102, 1151
Bse118I	RCCGGY	1 cut(s)	520
Bse1I	ACTGG	4 cut(s)	31, 1066, 1096, 1122
Bse3DI	GCAATG	5 cut(s)	70, 372, 665, 845, 907
Bse8I	GATNNNNATC	1 cut(s)	1253
BseBI	CCWGG	5 cut(s)	191, 580, 780, 984, 1134
BseDI	CCNNGG	6 cut(s)	363, 549, 621, 779, 982, 1185
BseGI	GGATG	3 cut(s)	460, 1042, 1118
BseJI	GATNNNNATC	1 cut(s)	1253
BseLI	CCNNNNNNNGG	6 cut(s)	190, 325, 418, 862, 1102, 1151
BseMI	GCAATG	5 cut(s)	70, 372, 665, 845, 907
BseNI	ACTGG	4 cut(s)	31, 1066, 1096, 1122
BseSI	GKGCMC	1 cut(s)	726
BseXI	GCAGC	4 cut(s)	16, 892, 965, 1162
Bsh1236I	CGCG	1 cut(s)	80
BshFI	GGCC	5 cut(s)	352, 368, 578, 973, 1253
BshNI	GGYRCC	2 cut(s)	475, 1105
BsiHKAI	GWGCWC	3 cut(s)	162, 632, 1093
BsiSI	CCGG	6 cut(s)	349, 393, 521, 551, 1033, 1161
BslFI	GGGAC	2 cut(s)	474, 517
BslI	CCNNNNNNNGG	6 cut(s)	190, 325, 418, 862, 1102, 1151
BsmAI	GTCTC	1 cut(s)	172
BsmFI	GGGAC	2 cut(s)	474, 517
BsnI	GGCC	5 cut(s)	352, 368, 578, 973, 1253
Bso31I	GGTCTC	1 cut(s)	172
Bsp1286I	GDGCHC	5 cut(s)	105, 162, 632, 726, 1093
Bsp143I	GATC	1 cut(s)	706
Bsp19I	CCATGG	1 cut(s)	621
Bsp68I	TCGCGA	1 cut(s)	80
BspACI	CCGC	7 cut(s)	216, 407, 566, 575, 702, 1004, 1059
BspANI	GGCC	5 cut(s)	352, 368, 578, 973, 1253
BspFNI	CGCG	1 cut(s)	80
BspHI	TCATGA	1 cut(s)	1245
BspLI	GGNNCC	4 cut(s)	441, 477, 940, 1107
BspT107I	GGYRCC	2 cut(s)	475, 1105
BspTNI	GGTCTC	1 cut(s)	172
BsrBI	CCGCTC	1 cut(s)	1006
BsrDI	GCAATG	5 cut(s)	70, 372, 665, 845, 907
BsrFI	RCCGGY	1 cut(s)	520
BsrI	ACTGG	4 cut(s)	31, 1066, 1096, 1122
BssAI	RCCGGY	1 cut(s)	520
BssECI	CCNNGG	6 cut(s)	363, 549, 621, 779, 982, 1185
BssMI	GATC	1 cut(s)	706
BssNI	GRCGYC	1 cut(s)	246
BssT1I	CCWWGG	3 cut(s)	363, 621, 1185
Bst2UI	CCWGG	5 cut(s)	191, 580, 780, 984, 1134
Bst4CI	ACNGT	4 cut(s)	299, 800, 851, 1105
Bst6I	CTCTTC	3 cut(s)	191, 281, 972
BstACI	GRCGYC	1 cut(s)	246
BstAPI	GCANNNNNTGC	1 cut(s)	1046
BstC8I	GCNNGC	6 cut(s)	522, 564, 672, 807, 836, 1180
BstDSI	CCRYGG	1 cut(s)	621
BstEII	GGTNACC	1 cut(s)	544
BstENI	CCTNNNNNAGG	1 cut(s)	188
BstF5I	GGATG	3 cut(s)	460, 1042, 1118
BstFNI	CGCG	1 cut(s)	80
BstH2I	RGCGCY	1 cut(s)	1145
BstHHI	GCGC	2 cut(s)	880, 1144
BstKTI	GATC	1 cut(s)	709
BstMAI	GTCTC	1 cut(s)	172
BstMBI	GATC	1 cut(s)	706
BstMWI	GCNNNNNNNGC	8 cut(s)	374, 475, 572, 641, 746, 765, 815, 1046
BstNI	CCWGG	5 cut(s)	191, 580, 780, 984, 1134
BstNSI	RCATGY	1 cut(s)	838
BstPI	GGTNACC	1 cut(s)	544
BstSCI	CCNGG	9 cut(s)	189, 347, 549, 578, 778, 982, 1032, 1132, 1160
BstSLI	GKGCMC	1 cut(s)	726
BstUI	CGCG	1 cut(s)	80
BstV1I	GCAGC	4 cut(s)	16, 892, 965, 1162
BstXI	CCANNNNNNTGG	1 cut(s)	1073
BsuRI	GGCC	5 cut(s)	352, 368, 578, 973, 1253
BtgI	CCRYGG	1 cut(s)	621
BtsCI	GGATG	3 cut(s)	460, 1042, 1118
BtsI	GCAGTG	1 cut(s)	754
BtsIMutI	CAGTG	1 cut(s)	754
BtuMI	TCGCGA	1 cut(s)	80
Cac8I	GCNNGC	6 cut(s)	522, 564, 672, 807, 836, 1180
CciI	TCATGA	1 cut(s)	1245
CfoI	GCGC	2 cut(s)	880, 1144
Cfr10I	RCCGGY	1 cut(s)	520
Cfr13I	GGNCC	6 cut(s)	351, 409, 439, 776, 986, 1154
CseI	GACGC	2 cut(s)	295, 475
Csp6I	GTAC	4 cut(s)	68, 238, 489, 796
CspCI	CAANNNNNGTGG	2 cut(s)	904, 939
CviAII	CATG	4 cut(s)	622, 835, 859, 1246
CviQI	GTAC	4 cut(s)	68, 238, 489, 796
DpnI	GATC	1 cut(s)	708
DpnII	GATC	1 cut(s)	706
DrdI	GACNNNNNNGTC	1 cut(s)	88
DseDI	GACNNNNNNGTC	1 cut(s)	88
EaeI	YGGCCR	2 cut(s)	576, 1251
Eam1104I	CTCTTC	3 cut(s)	191, 281, 972
EarI	CTCTTC	3 cut(s)	191, 281, 972
EciI	GGCGGA	1 cut(s)	422
Ecl136II	GAGCTC	2 cut(s)	160, 630
Eco130I	CCWWGG	3 cut(s)	363, 621, 1185
Eco24I	GRGCYC	3 cut(s)	105, 162, 632
Eco31I	GGTCTC	1 cut(s)	172
Eco47I	GGWCC	5 cut(s)	409, 439, 776, 986, 1154
Eco53kI	GAGCTC	2 cut(s)	160, 630
Eco57I	CTGAAG	1 cut(s)	1008
Eco91I	GGTNACC	1 cut(s)	544
EcoICRI	GAGCTC	2 cut(s)	160, 630
EcoNI	CCTNNNNNAGG	1 cut(s)	188
EcoO65I	GGTNACC	1 cut(s)	544
EcoRII	CCWGG	5 cut(s)	189, 578, 778, 982, 1132
EcoT14I	CCWWGG	3 cut(s)	363, 621, 1185
EcoT38I	GRGCYC	3 cut(s)	105, 162, 632
ErhI	CCWWGG	3 cut(s)	363, 621, 1185
FaeI	CATG	4 cut(s)	625, 838, 862, 1249
FaqI	GGGAC	2 cut(s)	474, 517
FatI	CATG	4 cut(s)	621, 834, 858, 1245
FauI	CCCGC	2 cut(s)	559, 1066
FblI	GTMKAC	6 cut(s)	150, 195, 309, 332, 387, 1100
Fnu4HI	GCNGC	6 cut(s)	5, 576, 702, 881, 979, 1176
FokI	GGATG	3 cut(s)	467, 1049, 1105
FriOI	GRGCYC	3 cut(s)	105, 162, 632
Fsp4HI	GCNGC	6 cut(s)	5, 576, 702, 881, 979, 1176
FspBI	CTAG	2 cut(s)	693, 888
GlaI	GCGC	2 cut(s)	879, 1143
GluI	GCNGC	6 cut(s)	5, 576, 702, 881, 979, 1176
HaeII	RGCGCY	1 cut(s)	1145
HaeIII	GGCC	5 cut(s)	352, 368, 578, 973, 1253
HapII	CCGG	6 cut(s)	349, 393, 521, 551, 1033, 1161
HgaI	GACGC	2 cut(s)	295, 475
HhaI	GCGC	2 cut(s)	880, 1144
Hin1I	GRCGYC	1 cut(s)	246
Hin1II	CATG	4 cut(s)	625, 838, 862, 1249
Hin6I	GCGC	2 cut(s)	878, 1142
HinP1I	GCGC	2 cut(s)	878, 1142
HincII	GTYRAC	3 cut(s)	196, 310, 333
HindII	GTYRAC	3 cut(s)	196, 310, 333
HinfI	GANTC	6 cut(s)	119, 315, 380, 415, 557, 784
HpaII	CCGG	6 cut(s)	349, 393, 521, 551, 1033, 1161
HphI	GGTGA	2 cut(s)	205, 556
Hpy188I	TCNGA	8 cut(s)	118, 172, 271, 320, 358, 439, 649, 1072
Hpy188III	TCNNGA	5 cut(s)	79, 419, 931, 949, 1246
Hpy99I	CGWCG	5 cut(s)	248, 251, 311, 314, 955
HpyAV	CCTTC	4 cut(s)	46, 770, 1119, 1167
HpyCH4III	ACNGT	4 cut(s)	299, 800, 851, 1105
HpyCH4IV	ACGT	2 cut(s)	246, 953
HpyCH4V	TGCA	9 cut(s)	4, 126, 680, 768, 838, 900, 915, 1040, 1049
HpyF10VI	GCNNNNNNNGC	8 cut(s)	374, 475, 572, 641, 746, 765, 815, 1046
HpySE526I	ACGT	2 cut(s)	246, 953
Hsp92I	GRCGYC	1 cut(s)	246
Hsp92II	CATG	4 cut(s)	625, 838, 862, 1249
HspAI	GCGC	2 cut(s)	878, 1142
KroI	GCCGGC	1 cut(s)	520
KroNI	GCCGGC	1 cut(s)	522
Kzo9I	GATC	1 cut(s)	706
LmnI	GCTCC	5 cut(s)	627, 732, 944, 1088, 1187
Lsp1109I	GCAGC	4 cut(s)	16, 892, 965, 1162
LweI	GCATC	2 cut(s)	689, 1027
MaeI	CTAG	2 cut(s)	693, 888
MaeII	ACGT	2 cut(s)	246, 953
MaeIII	GTNAC	5 cut(s)	544, 752, 851, 1189, 1224
MalI	GATC	1 cut(s)	708
MbiI	CCGCTC	1 cut(s)	1006
MboI	GATC	1 cut(s)	706
MboII	GAAGA	4 cut(s)	178, 268, 959, 1161
MhlI	GDGCHC	5 cut(s)	105, 162, 632, 726, 1093
MlsI	TGGCCA	1 cut(s)	1253
MluCI	AATT	6 cut(s)	427, 511, 660, 790, 995, 1204
MluNI	TGGCCA	1 cut(s)	1253
MlyI	GAGTC	4 cut(s)	113, 374, 551, 793
MmeI	TCCRAC	3 cut(s)	141, 294, 381
Mox20I	TGGCCA	1 cut(s)	1253
MroNI	GCCGGC	1 cut(s)	520
MscI	TGGCCA	1 cut(s)	1253
MseI	TTAA	2 cut(s)	59, 615
Msp20I	TGGCCA	1 cut(s)	1253
MspI	CCGG	6 cut(s)	349, 393, 521, 551, 1033, 1161
MspR9I	CCNGG	9 cut(s)	191, 349, 551, 580, 780, 984, 1034, 1134, 1162
MvaI	CCWGG	5 cut(s)	191, 580, 780, 984, 1134
MvnI	CGCG	1 cut(s)	80
MwoI	GCNNNNNNNGC	8 cut(s)	374, 475, 572, 641, 746, 765, 815, 1046
NaeI	GCCGGC	1 cut(s)	522
NciI	CCSGG	4 cut(s)	349, 551, 1034, 1162
NcoI	CCATGG	1 cut(s)	621
NdeII	GATC	1 cut(s)	706
NgoMIV	GCCGGC	1 cut(s)	520
NlaIII	CATG	4 cut(s)	625, 838, 862, 1249
NlaIV	GGNNCC	4 cut(s)	441, 477, 940, 1107
NmeAIII	GCCGAG	2 cut(s)	117, 611
NmuCI	GTSAC	2 cut(s)	544, 752
NruI	TCGCGA	1 cut(s)	80
NspI	RCATGY	1 cut(s)	838
PaeI	GCATGC	1 cut(s)	838
PagI	TCATGA	1 cut(s)	1245
PcsI	WCGNNNNNNNCGW	2 cut(s)	512, 521
PdiI	GCCGGC	1 cut(s)	522
PfeI	GAWTC	2 cut(s)	315, 415
PflFI	GACNNNGTC	2 cut(s)	383, 955
PfoI	TCCNGGA	3 cut(s)	1032, 1132, 1160
PkrI	GCNGC	6 cut(s)	6, 577, 703, 882, 980, 1177
PleI	GAGTC	4 cut(s)	113, 374, 551, 792
PpsI	GAGTC	4 cut(s)	113, 374, 551, 792
Psp124BI	GAGCTC	2 cut(s)	162, 632
Psp6I	CCWGG	5 cut(s)	189, 578, 778, 982, 1132
PspEI	GGTNACC	1 cut(s)	544
PspGI	CCWGG	5 cut(s)	189, 578, 778, 982, 1132
PspN4I	GGNNCC	4 cut(s)	441, 477, 940, 1107
PspPI	GGNCC	6 cut(s)	351, 409, 439, 776, 986, 1154
PsyI	GACNNNGTC	2 cut(s)	383, 955
RruI	TCGCGA	1 cut(s)	80
RsaI	GTAC	4 cut(s)	69, 239, 490, 797
RsaNI	GTAC	4 cut(s)	68, 238, 489, 796
SacI	GAGCTC	2 cut(s)	162, 632
SalI	GTCGAC	3 cut(s)	194, 308, 331
SaqAI	TTAA	2 cut(s)	59, 615
SatI	GCNGC	6 cut(s)	5, 576, 702, 881, 979, 1176
Sau3AI	GATC	1 cut(s)	706
Sau96I	GGNCC	6 cut(s)	351, 409, 439, 776, 986, 1154
SchI	GAGTC	4 cut(s)	113, 374, 551, 793
ScrFI	CCNGG	9 cut(s)	191, 349, 551, 580, 780, 984, 1034, 1134, 1162
SduI	GDGCHC	5 cut(s)	105, 162, 632, 726, 1093
SfaNI	GCATC	2 cut(s)	689, 1027
SgrDI	CGTCGACG	1 cut(s)	308
SinI	GGWCC	5 cut(s)	409, 439, 776, 986, 1154
SmlI	CTYRAG	1 cut(s)	161
SmoI	CTYRAG	1 cut(s)	161
SpeI	ACTAGT	1 cut(s)	887
SphI	GCATGC	1 cut(s)	838
Sse9I	AATT	6 cut(s)	427, 511, 660, 790, 995, 1204
SsiI	CCGC	7 cut(s)	216, 407, 566, 575, 702, 1004, 1059
SspMI	CTAG	2 cut(s)	693, 888
SstI	GAGCTC	2 cut(s)	162, 632
StyD4I	CCNGG	9 cut(s)	189, 347, 549, 578, 778, 982, 1032, 1132, 1160
StyI	CCWWGG	3 cut(s)	363, 621, 1185
TaaI	ACNGT	4 cut(s)	299, 800, 851, 1105
TaiI	ACGT	2 cut(s)	249, 956
TaqI	TCGA	9 cut(s)	99, 110, 195, 228, 249, 309, 332, 431, 587
TaqII	GACCGA	1 cut(s)	373
TasI	AATT	6 cut(s)	427, 511, 660, 790, 995, 1204
TatI	WGTACW	3 cut(s)	67, 488, 795
TauI	GCSGC	2 cut(s)	578, 704
TfiI	GAWTC	2 cut(s)	315, 415
Tru1I	TTAA	2 cut(s)	59, 615
Tru9I	TTAA	2 cut(s)	59, 615
TscAI	CASTG	1 cut(s)	761
TseFI	GTSAC	2 cut(s)	544, 752
TseI	GCWGC	4 cut(s)	4, 880, 978, 1175
Tsp45I	GTSAC	2 cut(s)	544, 752
TspDTI	ATGAA	4 cut(s)	28, 623, 801, 1234
TspGWI	ACGGA	3 cut(s)	327, 521, 614
TspRI	CASTG	1 cut(s)	761
Tth111I	GACNNNGTC	2 cut(s)	383, 955
VpaK11BI	GGWCC	5 cut(s)	409, 439, 776, 986, 1154
XagI	CCTNNNNNAGG	1 cut(s)	188
XapI	RAATTY	1 cut(s)	790
XceI	RCATGY	1 cut(s)	838
XmiI	GTMKAC	6 cut(s)	150, 195, 309, 332, 387, 1100
XspI	CTAG	2 cut(s)	693, 888
ZraI	GACGTC	1 cut(s)	247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.