Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0013375

Physical Location & Seq

Genomic Coordinates Forward (+)

12563391 .. 12566348

Gene Structure 2958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00172300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGCAGTCTTACAAAACCCAGTCCTTCATTTTCCTCTGGGTTTTAAGCAATGTACTTCTTCTCGCGACCTCAAAGTCCACAATCGAGCCCTGCTCGAACTCCGACTCCTGCAACGCTATGCTCGGCTACAAGGTCTACACCGAGCTCAAGGTCTCCGAAGTAGCTTCCCTCTTCCAGGTCGACCCCATCTCTATCCTCACCGCCAATGCCATCGACATTTCGTACCCCGACGTCGAAAACCACATTCTGCCCTCCGACCTCTTCCTCAAAATCCCAATCAACTGTTCCTGCGTCGACGGAATCCGAAAATCCGTTTCGACCCACTACAAGACTCGACCCTCCGACACTCTAGCCTCCATTGCCGACTCGGTCTACTCGGGTTTGGTGTCGGCGGACCAGATTCGGGAGGCTAATTCAATTTCGGACCCGTCGGTGCTGGATGTGGGACAGACGCTTGTGGTGCCTCTGCCGTGTACTTGCTTCAATGGGACGGATAATTCGTTGCCGGCGATTTACTTGTCGTATGTGGTGACCCCGGAGGACTCGCTGGCGGGGATTGCGGCGAGGTATTCGACTACGCTGACGGATTTGATGAATGTTAATGCCATGGGGAGCTCGGCTGTTAAGGCTTCTGATATTATTTCAATTCCATTGCCTGCGTGTGCATCAAACTTTCCTAGCTATGCTGCAGATCACGGCTTGATTGTGCCCAACGGGAGCTATGCCATTACAGCAAGTCACTGCCTTCAATGCAGTTGTGGTCCTGGGAGTCTAAATTTGTACTGTGAGCCTGCTTCATTAGCAGTTTCGTGTTCAAGCATGCAATGTAAAAACAGTAACCTCATGGTGGGCAACATTACAGCGCAGCAAACTAGTGCTGGTTGCAATGTTAGTTCTTGCAACTATGGTGGTTTCGTGAATGGCTCCATAATCACGACGTTGTCCACATCTCTTCGGCCTCGCTGCCCAGGACCGCAACAATTTCCACCACTCAAAGCCCCACCCACTTCAGTAATCCGGGATGCAACATTTGCACCAGCACCTGCACCCCAGTCTGATGGCTCAATAACAGGAGCACCCCAGTCTGCGGTGCCTTCAACGACATCCAGTTTACTTCCAGGATTAGCCCCCATAGGTGGTCCTTCCGGGAGTTCTTCTGCTGCTTGCTCCTTGGTTACGCCATTGACCAATTTGCCAAGTGCAGTTTTGTTACTCTTGTGTGTCAAGTTCATGATGACCATCTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005488 GO:0005539 GO:0005575 GO:0005623 GO:0005886 GO:0006955 GO:0008150 GO:0016020 GO:0031224 GO:0031225 GO:0031226 GO:0042834 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0050896 GO:0071944 GO:0097367

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM

Protein Analysis

415

Amino Acids

43.16

Weight (kDa)

5.0

Isoelectric Point (pI)

44.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM2_CERK1_LYK3_4_5	PF23472	107 - 156	5.5e-08	LYK3/4/5 LysM2 domain
LysM	PF01476	109 - 155	2.1e-09	LysM domain
LysM	PF01476	175 - 217	2.1e-07	LysM domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21880 AT1G21880
fragaria_vesca	FvH4_2g26750
malus_domestica	MD08G1165500.v1.1 MD15G1351200.v1.1
prunus_persica	Prupe.1G500000_v2.0.a1
pyrus_communis	pycom12654g00100
rosa_chinensis	RchiOBHm_Chr6g0295631
rosa_laevigata	RLG00000011781
rosa_multiflora	Rmu_sc0005000.1_g000002 Rmu_sc0006802.1_g000011
rosa_roxburghii	Rroxscaffold_7G00172300
rosa_rugosa	Rorug06G0253000
rosa_samantha	Rh6AG366000 Rh6BG374100 Rh6CG380400 Rh6DG367200
rosa_wichuraiana	Rw6G031940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1051
AasI	GACNNNNNNGTC	1 cut(s)	73
AatII	GACGTC	1 cut(s)	234
Acc36I	ACCTGC	1 cut(s)	1051
AccB1I	GGYRCC	2 cut(s)	460, 1090
AccI	GTMKAC	4 cut(s)	135, 180, 294, 372
AccII	CGCG	1 cut(s)	65
AciI	CCGC	6 cut(s)	201, 392, 551, 560, 974, 1088
AcsI	RAATTY	1 cut(s)	775
AcuI	CTGAAG	1 cut(s)	993
AcyI	GRCGYC	1 cut(s)	231
AfaI	GTAC	4 cut(s)	54, 224, 475, 782
AfiI	CCNNNNNNNGG	5 cut(s)	175, 403, 847, 1087, 1136
AgsI	TTSAA	6 cut(s)	417, 484, 645, 749, 816, 1098
AhlI	ACTAGT	1 cut(s)	872
AjnI	CCWGG	4 cut(s)	174, 763, 967, 1117
AjuI	GAANNNNNNNTTGG	2 cut(s)	268, 300
AloI	GAACNNNNNNTCC	2 cut(s)	89, 121
AluBI	AGCT	5 cut(s)	145, 164, 615, 681, 720
AluI	AGCT	5 cut(s)	145, 164, 615, 681, 720
Alw21I	GWGCWC	3 cut(s)	147, 617, 1078
Alw26I	GTCTC	1 cut(s)	157
AlwNI	CAGNNNCTG	1 cut(s)	1043
Ama87I	CYCGRG	1 cut(s)	376
AoxI	GGCC	1 cut(s)	956
ApeKI	GCWGC	4 cut(s)	686, 865, 963, 1160
ApoI	RAATTY	1 cut(s)	775
ArsI	GACNNNNNNTTYG	2 cut(s)	481, 513
AspLEI	GCGC	1 cut(s)	865
AspS9I	GGNCC	5 cut(s)	394, 424, 761, 971, 1139
AsuC2I	CCSGG	3 cut(s)	536, 1019, 1147
AsuHPI	GGTGA	2 cut(s)	190, 541
AvaI	CYCGRG	1 cut(s)	376
AvaII	GGWCC	5 cut(s)	394, 424, 761, 971, 1139
BaeGI	GKGCMC	1 cut(s)	711
BanI	GGYRCC	2 cut(s)	460, 1090
BanII	GRGCYC	3 cut(s)	90, 147, 617
Bbv12I	GWGCWC	3 cut(s)	147, 617, 1078
BbvI	GCAGC	4 cut(s)	673, 877, 950, 1147
BccI	CCATC	4 cut(s)	194, 218, 1052, 1247
BceAI	ACGGC	2 cut(s)	454, 712
BciT130I	CCWGG	4 cut(s)	176, 765, 969, 1119
BcnI	CCSGG	3 cut(s)	536, 1019, 1147
BcoDI	GTCTC	1 cut(s)	157
BcuI	ACTAGT	1 cut(s)	872
BfaI	CTAG	3 cut(s)	350, 678, 873
BfmI	CTRYAG	1 cut(s)	687
BfuAI	ACCTGC	1 cut(s)	1051
BisI	GCNGC	5 cut(s)	561, 687, 866, 964, 1161
BlsI	GCNGC	5 cut(s)	562, 688, 867, 965, 1162
Bme1390I	CCNGG	7 cut(s)	176, 536, 765, 969, 1019, 1119, 1147
Bme18I	GGWCC	5 cut(s)	394, 424, 761, 971, 1139
BmeT110I	CYCGRG	1 cut(s)	376
BmgT120I	GGNCC	5 cut(s)	394, 424, 761, 971, 1139
BmiI	GGNNCC	4 cut(s)	426, 462, 925, 1092
BmrFI	CCNGG	7 cut(s)	176, 536, 765, 969, 1019, 1119, 1147
BmrI	ACTGGG	3 cut(s)	13, 1045, 1075
BmsI	GCATC	2 cut(s)	674, 1012
BmuI	ACTGGG	3 cut(s)	13, 1045, 1075
BplI	GAGNNNNNCTC	2 cut(s)	77, 109
BpuEI	CTTGAG	1 cut(s)	131
BpuMI	CCSGG	3 cut(s)	536, 1019, 1147
BsaBI	GATNNNNATC	1 cut(s)	1238
BsaHI	GRCGYC	1 cut(s)	231
BsaI	GGTCTC	1 cut(s)	157
BsaJI	CCNNGG	5 cut(s)	534, 606, 764, 967, 1170
BsaXI	ACNNNNNCTCC	2 cut(s)	89, 119
Bsc4I	CCNNNNNNNGG	5 cut(s)	175, 403, 847, 1087, 1136
Bse118I	RCCGGY	1 cut(s)	505
Bse1I	ACTGG	4 cut(s)	19, 1051, 1081, 1107
Bse3DI	GCAATG	5 cut(s)	55, 357, 650, 830, 892
Bse8I	GATNNNNATC	1 cut(s)	1238
BseBI	CCWGG	4 cut(s)	176, 765, 969, 1119
BseDI	CCNNGG	5 cut(s)	534, 606, 764, 967, 1170
BseGI	GGATG	3 cut(s)	445, 1027, 1103
BseJI	GATNNNNATC	1 cut(s)	1238
BseLI	CCNNNNNNNGG	5 cut(s)	175, 403, 847, 1087, 1136
BseMI	GCAATG	5 cut(s)	55, 357, 650, 830, 892
BseNI	ACTGG	4 cut(s)	19, 1051, 1081, 1107
BseSI	GKGCMC	1 cut(s)	711
BseXI	GCAGC	4 cut(s)	673, 877, 950, 1147
BsgI	GTGCAG	2 cut(s)	1029, 1221
Bsh1236I	CGCG	1 cut(s)	65
BshFI	GGCC	1 cut(s)	958
BshNI	GGYRCC	2 cut(s)	460, 1090
BsiHKAI	GWGCWC	3 cut(s)	147, 617, 1078
BsiHKCI	CYCGRG	1 cut(s)	376
BsiSI	CCGG	4 cut(s)	506, 536, 1018, 1146
BslFI	GGGAC	2 cut(s)	459, 502
BslI	CCNNNNNNNGG	5 cut(s)	175, 403, 847, 1087, 1136
BsmAI	GTCTC	1 cut(s)	157
BsmFI	GGGAC	2 cut(s)	459, 502
BsnI	GGCC	1 cut(s)	958
Bso31I	GGTCTC	1 cut(s)	157
BsoBI	CYCGRG	1 cut(s)	376
Bsp1286I	GDGCHC	5 cut(s)	90, 147, 617, 711, 1078
Bsp143I	GATC	1 cut(s)	691
Bsp19I	CCATGG	1 cut(s)	606
Bsp68I	TCGCGA	1 cut(s)	65
BspACI	CCGC	6 cut(s)	201, 392, 551, 560, 974, 1088
BspANI	GGCC	1 cut(s)	958
BspFNI	CGCG	1 cut(s)	65
BspHI	TCATGA	1 cut(s)	1230
BspLI	GGNNCC	4 cut(s)	426, 462, 925, 1092
BspMAI	CTGCAG	1 cut(s)	691
BspMI	ACCTGC	1 cut(s)	1051
BspT107I	GGYRCC	2 cut(s)	460, 1090
BspTNI	GGTCTC	1 cut(s)	157
BsrDI	GCAATG	5 cut(s)	55, 357, 650, 830, 892
BsrFI	RCCGGY	1 cut(s)	505
BsrI	ACTGG	4 cut(s)	19, 1051, 1081, 1107
BssAI	RCCGGY	1 cut(s)	505
BssECI	CCNNGG	5 cut(s)	534, 606, 764, 967, 1170
BssMI	GATC	1 cut(s)	691
BssNI	GRCGYC	1 cut(s)	231
BssT1I	CCWWGG	2 cut(s)	606, 1170
Bst2UI	CCWGG	4 cut(s)	176, 765, 969, 1119
Bst4CI	ACNGT	3 cut(s)	284, 785, 836
Bst6I	CTCTTC	3 cut(s)	176, 266, 957
BstACI	GRCGYC	1 cut(s)	231
BstAPI	GCANNNNNTGC	1 cut(s)	1031
BstC8I	GCNNGC	6 cut(s)	507, 549, 657, 792, 821, 1165
BstDSI	CCRYGG	1 cut(s)	606
BstEII	GGTNACC	1 cut(s)	529
BstENI	CCTNNNNNAGG	1 cut(s)	173
BstF5I	GGATG	3 cut(s)	445, 1027, 1103
BstFNI	CGCG	1 cut(s)	65
BstHHI	GCGC	1 cut(s)	865
BstKTI	GATC	1 cut(s)	694
BstMAI	GTCTC	1 cut(s)	157
BstMBI	GATC	1 cut(s)	691
BstMWI	GCNNNNNNNGC	8 cut(s)	359, 460, 557, 626, 731, 750, 800, 1031
BstNI	CCWGG	4 cut(s)	176, 765, 969, 1119
BstNSI	RCATGY	1 cut(s)	823
BstPI	GGTNACC	1 cut(s)	529
BstSCI	CCNGG	7 cut(s)	174, 534, 763, 967, 1017, 1117, 1145
BstSFI	CTRYAG	1 cut(s)	687
BstSLI	GKGCMC	1 cut(s)	711
BstUI	CGCG	1 cut(s)	65
BstV1I	GCAGC	4 cut(s)	673, 877, 950, 1147
BstXI	CCANNNNNNTGG	1 cut(s)	1058
BsuRI	GGCC	1 cut(s)	958
BtgI	CCRYGG	1 cut(s)	606
BtsCI	GGATG	3 cut(s)	445, 1027, 1103
BtsI	GCAGTG	1 cut(s)	739
BtsIMutI	CAGTG	1 cut(s)	739
BtuMI	TCGCGA	1 cut(s)	65
BveI	ACCTGC	1 cut(s)	1051
Cac8I	GCNNGC	6 cut(s)	507, 549, 657, 792, 821, 1165
CaiI	CAGNNNCTG	1 cut(s)	1043
CciI	TCATGA	1 cut(s)	1230
CfoI	GCGC	1 cut(s)	865
Cfr10I	RCCGGY	1 cut(s)	505
Cfr13I	GGNCC	5 cut(s)	394, 424, 761, 971, 1139
CseI	GACGC	2 cut(s)	280, 460
Csp6I	GTAC	4 cut(s)	53, 223, 474, 781
CspCI	CAANNNNNGTGG	2 cut(s)	889, 924
CviAII	CATG	4 cut(s)	607, 820, 844, 1231
CviQI	GTAC	4 cut(s)	53, 223, 474, 781
DpnI	GATC	1 cut(s)	693
DpnII	GATC	1 cut(s)	691
DrdI	GACNNNNNNGTC	1 cut(s)	73
DseDI	GACNNNNNNGTC	1 cut(s)	73
Eam1104I	CTCTTC	3 cut(s)	176, 266, 957
EarI	CTCTTC	3 cut(s)	176, 266, 957
EciI	GGCGGA	1 cut(s)	407
Ecl136II	GAGCTC	2 cut(s)	145, 615
Eco130I	CCWWGG	2 cut(s)	606, 1170
Eco24I	GRGCYC	3 cut(s)	90, 147, 617
Eco31I	GGTCTC	1 cut(s)	157
Eco47I	GGWCC	5 cut(s)	394, 424, 761, 971, 1139
Eco53kI	GAGCTC	2 cut(s)	145, 615
Eco57I	CTGAAG	1 cut(s)	993
Eco88I	CYCGRG	1 cut(s)	376
Eco91I	GGTNACC	1 cut(s)	529
EcoICRI	GAGCTC	2 cut(s)	145, 615
EcoNI	CCTNNNNNAGG	1 cut(s)	173
EcoO65I	GGTNACC	1 cut(s)	529
EcoRII	CCWGG	4 cut(s)	174, 763, 967, 1117
EcoT14I	CCWWGG	2 cut(s)	606, 1170
EcoT38I	GRGCYC	3 cut(s)	90, 147, 617
ErhI	CCWWGG	2 cut(s)	606, 1170
FaeI	CATG	4 cut(s)	610, 823, 847, 1234
FaqI	GGGAC	2 cut(s)	459, 502
FatI	CATG	4 cut(s)	606, 819, 843, 1230
FauI	CCCGC	1 cut(s)	544
FblI	GTMKAC	4 cut(s)	135, 180, 294, 372
Fnu4HI	GCNGC	5 cut(s)	561, 687, 866, 964, 1161
FokI	GGATG	3 cut(s)	452, 1034, 1090
FriOI	GRGCYC	3 cut(s)	90, 147, 617
Fsp4HI	GCNGC	5 cut(s)	561, 687, 866, 964, 1161
FspBI	CTAG	3 cut(s)	350, 678, 873
GlaI	GCGC	1 cut(s)	864
GluI	GCNGC	5 cut(s)	561, 687, 866, 964, 1161
HaeIII	GGCC	1 cut(s)	958
HapII	CCGG	4 cut(s)	506, 536, 1018, 1146
HgaI	GACGC	2 cut(s)	280, 460
HhaI	GCGC	1 cut(s)	865
Hin1I	GRCGYC	1 cut(s)	231
Hin1II	CATG	4 cut(s)	610, 823, 847, 1234
Hin6I	GCGC	1 cut(s)	863
HinP1I	GCGC	1 cut(s)	863
HincII	GTYRAC	2 cut(s)	181, 295
HindII	GTYRAC	2 cut(s)	181, 295
HinfI	GANTC	7 cut(s)	104, 300, 331, 365, 400, 542, 769
HpaII	CCGG	4 cut(s)	506, 536, 1018, 1146
HphI	GGTGA	2 cut(s)	190, 541
Hpy166II	GTNNAC	8 cut(s)	78, 136, 181, 295, 373, 474, 945, 1112
Hpy188I	TCNGA	8 cut(s)	103, 157, 256, 305, 343, 424, 634, 1057
Hpy188III	TCNNGA	5 cut(s)	64, 404, 916, 934, 1231
Hpy8I	GTNNAC	8 cut(s)	78, 136, 181, 295, 373, 474, 945, 1112
Hpy99I	CGWCG	6 cut(s)	233, 236, 296, 299, 433, 940
HpyAV	CCTTC	4 cut(s)	34, 755, 1104, 1152
HpyCH4III	ACNGT	3 cut(s)	284, 785, 836
HpyCH4IV	ACGT	2 cut(s)	231, 938
HpyF10VI	GCNNNNNNNGC	8 cut(s)	359, 460, 557, 626, 731, 750, 800, 1031
HpySE526I	ACGT	2 cut(s)	231, 938
Hsp92I	GRCGYC	1 cut(s)	231
Hsp92II	CATG	4 cut(s)	610, 823, 847, 1234
HspAI	GCGC	1 cut(s)	863
KroI	GCCGGC	1 cut(s)	505
KroNI	GCCGGC	1 cut(s)	507
Kzo9I	GATC	1 cut(s)	691
LmnI	GCTCC	5 cut(s)	612, 717, 929, 1073, 1172
Lsp1109I	GCAGC	4 cut(s)	673, 877, 950, 1147
LweI	GCATC	2 cut(s)	674, 1012
MaeI	CTAG	3 cut(s)	350, 678, 873
MaeII	ACGT	2 cut(s)	231, 938
MaeIII	GTNAC	5 cut(s)	529, 737, 836, 1174, 1209
MalI	GATC	1 cut(s)	693
MboI	GATC	1 cut(s)	691
MboII	GAAGA	5 cut(s)	50, 163, 253, 944, 1146
MhlI	GDGCHC	5 cut(s)	90, 147, 617, 711, 1078
MluCI	AATT	7 cut(s)	412, 417, 496, 645, 775, 980, 1189
MlyI	GAGTC	5 cut(s)	98, 325, 359, 536, 778
MmeI	TCCRAC	3 cut(s)	126, 279, 366
MroNI	GCCGGC	1 cut(s)	505
MseI	TTAA	3 cut(s)	44, 600, 624
MspI	CCGG	4 cut(s)	506, 536, 1018, 1146
MspR9I	CCNGG	7 cut(s)	176, 536, 765, 969, 1019, 1119, 1147
MvaI	CCWGG	4 cut(s)	176, 765, 969, 1119
MvnI	CGCG	1 cut(s)	65
MwoI	GCNNNNNNNGC	8 cut(s)	359, 460, 557, 626, 731, 750, 800, 1031
NaeI	GCCGGC	1 cut(s)	507
NciI	CCSGG	3 cut(s)	536, 1019, 1147
NcoI	CCATGG	1 cut(s)	606
NdeII	GATC	1 cut(s)	691
NgoMIV	GCCGGC	1 cut(s)	505
NlaIII	CATG	4 cut(s)	610, 823, 847, 1234
NlaIV	GGNNCC	4 cut(s)	426, 462, 925, 1092
NmeAIII	GCCGAG	2 cut(s)	102, 596
NmuCI	GTSAC	2 cut(s)	529, 737
NruI	TCGCGA	1 cut(s)	65
NspI	RCATGY	1 cut(s)	823
PaeI	GCATGC	1 cut(s)	823
PagI	TCATGA	1 cut(s)	1230
PaqCI	CACCTGC	1 cut(s)	1051
PcsI	WCGNNNNNNNCGW	2 cut(s)	497, 506
PdiI	GCCGGC	1 cut(s)	507
PfeI	GAWTC	2 cut(s)	300, 400
PflFI	GACNNNGTC	2 cut(s)	368, 940
PfoI	TCCNGGA	3 cut(s)	1017, 1117, 1145
PkrI	GCNGC	5 cut(s)	562, 688, 867, 965, 1162
PleI	GAGTC	5 cut(s)	98, 325, 359, 536, 777
PpsI	GAGTC	5 cut(s)	98, 325, 359, 536, 777
Psp124BI	GAGCTC	2 cut(s)	147, 617
Psp6I	CCWGG	4 cut(s)	174, 763, 967, 1117
PspEI	GGTNACC	1 cut(s)	529
PspGI	CCWGG	4 cut(s)	174, 763, 967, 1117
PspN4I	GGNNCC	4 cut(s)	426, 462, 925, 1092
PspPI	GGNCC	5 cut(s)	394, 424, 761, 971, 1139
PstI	CTGCAG	1 cut(s)	691
PstNI	CAGNNNCTG	1 cut(s)	1043
PsyI	GACNNNGTC	2 cut(s)	368, 940
RruI	TCGCGA	1 cut(s)	65
RsaI	GTAC	4 cut(s)	54, 224, 475, 782
RsaNI	GTAC	4 cut(s)	53, 223, 474, 781
SacI	GAGCTC	2 cut(s)	147, 617
SalI	GTCGAC	2 cut(s)	179, 293
SaqAI	TTAA	3 cut(s)	44, 600, 624
SatI	GCNGC	5 cut(s)	561, 687, 866, 964, 1161
Sau3AI	GATC	1 cut(s)	691
Sau96I	GGNCC	5 cut(s)	394, 424, 761, 971, 1139
SchI	GAGTC	5 cut(s)	98, 325, 359, 536, 778
ScrFI	CCNGG	7 cut(s)	176, 536, 765, 969, 1019, 1119, 1147
SduI	GDGCHC	5 cut(s)	90, 147, 617, 711, 1078
SfaNI	GCATC	2 cut(s)	674, 1012
SfcI	CTRYAG	1 cut(s)	687
SgrDI	CGTCGACG	1 cut(s)	293
SinI	GGWCC	5 cut(s)	394, 424, 761, 971, 1139
SmlI	CTYRAG	1 cut(s)	146
SmoI	CTYRAG	1 cut(s)	146
SpeI	ACTAGT	1 cut(s)	872
SphI	GCATGC	1 cut(s)	823
Sse9I	AATT	7 cut(s)	412, 417, 496, 645, 775, 980, 1189
SsiI	CCGC	6 cut(s)	201, 392, 551, 560, 974, 1088
SspMI	CTAG	3 cut(s)	350, 678, 873
SstI	GAGCTC	2 cut(s)	147, 617
StyD4I	CCNGG	7 cut(s)	174, 534, 763, 967, 1017, 1117, 1145
StyI	CCWWGG	2 cut(s)	606, 1170
TaaI	ACNGT	3 cut(s)	284, 785, 836
TaiI	ACGT	2 cut(s)	234, 941
TaqI	TCGA	9 cut(s)	84, 95, 180, 213, 234, 294, 317, 334, 572
TaqII	GACCGA	1 cut(s)	358
TasI	AATT	7 cut(s)	412, 417, 496, 645, 775, 980, 1189
TatI	WGTACW	3 cut(s)	52, 473, 780
TauI	GCSGC	1 cut(s)	563
TfiI	GAWTC	2 cut(s)	300, 400
Tru1I	TTAA	3 cut(s)	44, 600, 624
Tru9I	TTAA	3 cut(s)	44, 600, 624
TscAI	CASTG	1 cut(s)	746
TseFI	GTSAC	2 cut(s)	529, 737
TseI	GCWGC	4 cut(s)	686, 865, 963, 1160
Tsp45I	GTSAC	2 cut(s)	529, 737
TspDTI	ATGAA	4 cut(s)	16, 608, 786, 1219
TspGWI	ACGGA	4 cut(s)	301, 312, 506, 599
TspRI	CASTG	1 cut(s)	746
Tth111I	GACNNNGTC	2 cut(s)	368, 940
VpaK11BI	GGWCC	5 cut(s)	394, 424, 761, 971, 1139
XagI	CCTNNNNNAGG	1 cut(s)	173
XapI	RAATTY	1 cut(s)	775
XceI	RCATGY	1 cut(s)	823
XmiI	GTMKAC	4 cut(s)	135, 180, 294, 372
XspI	CTAG	3 cut(s)	350, 678, 873
ZraI	GACGTC	1 cut(s)	232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.