MD08G1248100.v1.1

Mitotic checkpoint family protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
31212218 .. 31222006
9789 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1248100.v1.1.491

Sequence Viewer

Length: 2175 bp
ATGATAGTAAGAACTCCCCCGACGAAGAAGCAACGGGCGGCGGCGCCGGAGGCGGAGACCCCACCGCCTGCCCCAGGCCCTGGCCCTCTCGTCATCTTCGAGGACGACCCTCCTCCTCCTTCTTCTTCCCTTCCACCTCCCGATTCCTCCTCCCACCACTTGCTCTGCACCTATCAATGCCGCCAAATGGTTAAATCAGACTTTATAGACGCCTTGAGCAACACGGAGAAGCAAGCTTCTGATTATCAATCTAAATTGGCAGCTTTAAATGAGAAATTTTGCAAAGTTGAATCTGAGAGGAAGAAATATCTGGATCAATTTTTGTATGTGGAACAAGAACTTGCTGCTGCAAAGGGACGTGAACAGGCTCTGCAGGAGCAGCTTTTGAAGGAGTTACACGATTCTCATGAAAGATTGACTAAACAATTACAATCAAACAGCGAACTTGAGGTGAAGCTTCAAAATGAAATGAACCTTCGCATGAAAGCTGAGTCTTCAGCAGCTTTGGCTGAGGAGAAAGCAAGTGATGTAGAGGGGAAACTGAGACATCTTTCTGAAAACATAGAGAGGGAAAAAAAGCGTCTCAATAACGATTTTTCCCAGCTGAAAGGAGAATCCAAGCTTTCTGTTTCTAGAATAACAGCAGATCTTGAACGAATGGAATGCAGATCTCATAATGCTGAGAAAGAATCAGAGCTATTGAAAAAGCAGCTGGATGATATTAAGAAACAACTTAGCGAGTGCGTGCAACAAAAAAGCGAAGTGGAGAAGAAACTGTCAAGTTTTACATTTCAAGAAGTTGAATCCACGGAGAATAATATTCTTGTTAAACATCTGCAAGAAGAGCTTAGAAACTTTGATGCTGAAGTGAGGGAAGCAAGAAAGCTGAAGTTGGCTCATGAAAATGTTGAGTTATTGAAGGAAAAATTGTTGGAAGAAAAGGGCCGCAGAGAGAGGGCAGAGGCAGAGTTATCCAAACTACAAGAATTACAACTTAGTATGAAGAAGTTGGAGAATGAATTGACAACTTGGAAGTTGATGAGTAAAGACATTCCAGGCGTGTCATGTTCTGAGGATATACCTGTTAAATTTGCAGCTTTACAAAAAGAGGTAATTGATAGCATGATGAAAGTGGGTGAGGCTAATGCTGCCTTGAAACAACTGGAGGTAGCTCTAGATGCTGCAAAAATTGATAAACAAAATGCTGAAATAGAGGCTAACCTGGCGAAAGAGAAGGTGGATGTATCAAAATCAGAGGTTAAGCGGATTGAATTAATGCTCTCTATGGTTACTGAGGAAAGGGATAAGTTGAGAAATGTCCTTAATGGACTGAAGTTGGTAAAGAATGATGAAGCTGGAGATGAAGCAGCCAGTCAAACTTTTCTTCAGGAGGTTGAATCATCACTTGCAAAGAAAGAGGCCTATATTAAAGAATTGGAATGTGGTCTGTGTGAACAAAAAGAAGTTAATAGTCGTCAACGTGAAGAAATAAAGTTGCTTAATGAGAGGTTGAACAATGAAGCTAGAAGAATGAAGTCATTGGAGAGGGAGAGCGATCGACTTCGTTCAGAGATCGCTCTGCTGGAGTCCAAGATTGGTCATGGCGATTTCTCTGCTGCAAATACTAAAGTTTTAAGAATGGTGAATACTCTTGCGGCTGATAATGAAGCAAAACAAACTATTGAGGCATTACAAACTGAGTTACAGAAGACAAAGGAGAAGTTACAGGCTGTGGAAGAATTGAAAAGTCAATCAGGTGATGCTGGAACATCGGTGGATTCCTACATATCTGGGAAGATAGTGCAGTTGAAAGAACAAATTGCAACTCTGGAAAAACGTGAAGAAAGGTACAAGACTGTTTTTGCCGACCGAATTTCAGTGTTCAGGAGGGCATGTTGTGAGCTCTTTGGTTACAAGATTGTGATGGATGAACACCAGCGTCCCAATGGAATCCCCATTACACGTTTTACCCTCCAATCTATATATGCGCAAAGTGATGATGAGAAGCTTGAATTTGAATATGAATCAGGGAGCACAAACATTTTGGCAAATGATTACACCTCGCAGTCTGAGATATCTCAACAGGTTGAGATATTTATTCGGAAGTTGAATTCAATCCCAGCTTTCACTGCCAACTTAACAGTGGAGTCTTTCAACCGGCGAACCCTGACTTAA

Protein Analysis

725

Amino Acids

82.39

Weight (kDa)

5.48

Isoelectric Point (pI)

53.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAD PF05557 110 - 722 1.2e-27 Mitotic checkpoint protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1989
AccB1I GGYRCC 1 cut(s) 43
AccB7I CCANNNNNTGG 1 cut(s) 80
AciI CCGC 8 cut(s) 38, 41, 53, 65, 181, 946, 1264, 1655
AclWI GGATC 1 cut(s) 321
AcsI RAATTY 5 cut(s) 275, 1088, 1872, 2012, 2110
AcuI CTGAAG 5 cut(s) 480, 885, 908, 1352, 1370
AcyI GRCGYC 2 cut(s) 44, 210
AfaI GTAC 1 cut(s) 1850
AfiI CCNNNNNNNGG 3 cut(s) 74, 80, 187
AflIII ACRYGT 1 cut(s) 1961
AjiI CACGTC 1 cut(s) 359
AjnI CCWGG 4 cut(s) 73, 79, 1054, 1221
Alw21I GWGCWC 2 cut(s) 1905, 2036
Alw26I GTCTC 3 cut(s) 50, 538, 587
AlwI GGATC 1 cut(s) 321
AlwNI CAGNNNCTG 2 cut(s) 80, 370
AoxI GGCC 4 cut(s) 76, 82, 943, 1419
ApoI RAATTY 5 cut(s) 275, 1088, 1872, 2012, 2110
AseI ATTAAT 1 cut(s) 1274
AspLEI GCGC 2 cut(s) 46, 1990
AspS9I GGNCC 3 cut(s) 77, 83, 943
AsuHPI GGTGA 4 cut(s) 463, 1148, 1654, 1769
BanI GGYRCC 1 cut(s) 43
BanII GRGCYC 1 cut(s) 1905
BbsI GAAGAC 2 cut(s) 486, 1715
Bbv12I GWGCWC 2 cut(s) 1905, 2036
BbvCI CCTCAGC 1 cut(s) 510
BccI CCATC 1 cut(s) 1918
BcgI CGANNNNNNTGC 4 cut(s) 645, 679, 1595, 1629
BciT130I CCWGG 4 cut(s) 75, 81, 1056, 1223
BcoDI GTCTC 3 cut(s) 50, 538, 587
BfaI CTAG 3 cut(s) 633, 1175, 1524
BfmI CTRYAG 1 cut(s) 371
BfoI RGCGCY 1 cut(s) 47
BglII AGATCT 2 cut(s) 646, 668
Bme1390I CCNGG 4 cut(s) 75, 81, 1056, 1223
BmgBI CACGTC 1 cut(s) 359
BmgT120I GGNCC 3 cut(s) 77, 83, 943
BmiI GGNNCC 1 cut(s) 45
BmrFI CCNGG 4 cut(s) 75, 81, 1056, 1223
BmsI GCATC 3 cut(s) 850, 1168, 1750
BpiI GAAGAC 2 cut(s) 486, 1715
BpmI CTGGAG 3 cut(s) 1184, 1377, 1604
Bpu10I CCTNAGC 1 cut(s) 510
BpuEI CTTGAG 2 cut(s) 235, 467
BsaHI GRCGYC 2 cut(s) 44, 210
BsaI GGTCTC 1 cut(s) 50
BsaJI CCNNGG 3 cut(s) 73, 79, 807
BsaXI ACNNNNNCTCC 2 cut(s) 1879, 1909
Bsc4I CCNNNNNNNGG 3 cut(s) 74, 80, 187
Bse118I RCCGGY 1 cut(s) 2157
Bse1I ACTGG 2 cut(s) 1167, 1371
BseBI CCWGG 4 cut(s) 75, 81, 1056, 1223
BseDI CCNNGG 3 cut(s) 73, 79, 807
BseGI GGATG 3 cut(s) 721, 1246, 1933
BseLI CCNNNNNNNGG 3 cut(s) 74, 80, 187
BseMII CTCAG 9 cut(s) 285, 480, 501, 533, 672, 1062, 1284, 1689, 2061
BseNI ACTGG 2 cut(s) 1167, 1371
BseRI GAGGAG 4 cut(s) 102, 105, 139, 527
BseYI CCCAGC 2 cut(s) 600, 2119
BsgI GTGCAG 2 cut(s) 151, 1823
Bsh1285I CGRYCG 2 cut(s) 1558, 1870
BshFI GGCC 4 cut(s) 78, 84, 945, 1421
BshNI GGYRCC 1 cut(s) 43
BsiEI CGRYCG 2 cut(s) 1558, 1870
BsiHKAI GWGCWC 2 cut(s) 1905, 2036
BsiSI CCGG 2 cut(s) 47, 2158
BslFI GGGAC 2 cut(s) 369, 1926
BslI CCNNNNNNNGG 3 cut(s) 74, 80, 187
BsmAI GTCTC 3 cut(s) 50, 538, 587
BsmBI CGTCTC 1 cut(s) 587
BsmFI GGGAC 2 cut(s) 369, 1926
BsmI GAATGC 1 cut(s) 668
BsnI GGCC 4 cut(s) 78, 84, 945, 1421
Bso31I GGTCTC 1 cut(s) 50
Bsp1286I GDGCHC 2 cut(s) 1905, 2036
Bsp143I GATC 5 cut(s) 313, 646, 668, 1555, 1572
BspACI CCGC 8 cut(s) 38, 41, 53, 65, 181, 946, 1264, 1655
BspANI GGCC 4 cut(s) 78, 84, 945, 1421
BspCNI CTCAG 9 cut(s) 286, 481, 502, 534, 673, 1063, 1285, 1690, 2062
BspHI TCATGA 2 cut(s) 406, 898
BspLI GGNNCC 1 cut(s) 45
BspMAI CTGCAG 1 cut(s) 375
BspPI GGATC 1 cut(s) 321
BspQI GCTCTTC 1 cut(s) 837
BspT107I GGYRCC 1 cut(s) 43
BspTNI GGTCTC 1 cut(s) 50
BsrFI RCCGGY 1 cut(s) 2157
BsrI ACTGG 2 cut(s) 1167, 1371
BssAI RCCGGY 1 cut(s) 2157
BssECI CCNNGG 3 cut(s) 73, 79, 807
BssMI GATC 5 cut(s) 313, 646, 668, 1555, 1572
BssNI GRCGYC 2 cut(s) 44, 210
Bst2UI CCWGG 4 cut(s) 75, 81, 1056, 1223
Bst4CI ACNGT 3 cut(s) 777, 1858, 2143
Bst6I CTCTTC 1 cut(s) 837
BstACI GRCGYC 2 cut(s) 44, 210
BstC8I GCNNGC 3 cut(s) 69, 234, 746
BstDSI CCRYGG 1 cut(s) 807
BstENI CCTNNNNNAGG 1 cut(s) 72
BstF5I GGATG 3 cut(s) 721, 1246, 1933
BstH2I RGCGCY 1 cut(s) 47
BstHHI GCGC 2 cut(s) 46, 1990
BstKTI GATC 5 cut(s) 316, 649, 671, 1558, 1575
BstMAI GTCTC 3 cut(s) 50, 538, 587
BstMBI GATC 5 cut(s) 313, 646, 668, 1555, 1572
BstMCI CGRYCG 2 cut(s) 1558, 1870
BstMWI GCNNNNNNNGC 8 cut(s) 50, 379, 506, 844, 1148, 1178, 1223, 2129
BstNI CCWGG 4 cut(s) 75, 81, 1056, 1223
BstNSI RCATGY 1 cut(s) 1896
BstSCI CCNGG 4 cut(s) 73, 79, 1054, 1221
BstSFI CTRYAG 1 cut(s) 371
BstV2I GAAGAC 2 cut(s) 486, 1715
BstX2I RGATCY 2 cut(s) 646, 668
BstYI RGATCY 2 cut(s) 646, 668
BsuRI GGCC 4 cut(s) 78, 84, 945, 1421
BtgI CCRYGG 1 cut(s) 807
BtrI CACGTC 1 cut(s) 359
BtsCI GGATG 3 cut(s) 721, 1246, 1933
BtsI GCAGTG 1 cut(s) 2127
BtsIMutI CAGTG 3 cut(s) 1884, 2127, 2148
Cac8I GCNNGC 3 cut(s) 69, 234, 746
CaiI CAGNNNCTG 2 cut(s) 80, 370
CciI TCATGA 2 cut(s) 406, 898
CfoI GCGC 2 cut(s) 46, 1990
Cfr10I RCCGGY 1 cut(s) 2157
Cfr13I GGNCC 3 cut(s) 77, 83, 943
CseI GACGC 3 cut(s) 218, 569, 1928
Csp6I GTAC 1 cut(s) 1849
CviAII CATG 7 cut(s) 407, 481, 899, 1065, 1123, 1601, 1893
CviQI GTAC 1 cut(s) 1849
DinI GGCGCC 1 cut(s) 45
DpnI GATC 5 cut(s) 315, 648, 670, 1557, 1574
DpnII GATC 5 cut(s) 313, 646, 668, 1555, 1572
DraI TTTAAA 1 cut(s) 267
Eam1104I CTCTTC 1 cut(s) 837
EarI CTCTTC 1 cut(s) 837
EciI GGCGGA 1 cut(s) 68
Ecl136II GAGCTC 1 cut(s) 1903
Eco147I AGGCCT 1 cut(s) 1421
Eco24I GRGCYC 1 cut(s) 1905
Eco31I GGTCTC 1 cut(s) 50
Eco32I GATATC 1 cut(s) 2076
Eco53kI GAGCTC 1 cut(s) 1903
Eco57I CTGAAG 5 cut(s) 480, 885, 908, 1352, 1370
EcoICRI GAGCTC 1 cut(s) 1903
EcoNI CCTNNNNNAGG 1 cut(s) 72
EcoO109I RGGNCCY 1 cut(s) 77
EcoRI GAATTC 1 cut(s) 2110
EcoRII CCWGG 4 cut(s) 73, 79, 1054, 1221
EcoRV GATATC 1 cut(s) 2076
EcoT38I GRGCYC 1 cut(s) 1905
EgeI GGCGCC 1 cut(s) 45
EheI GGCGCC 1 cut(s) 45
Esp3I CGTCTC 1 cut(s) 587
FaeI CATG 7 cut(s) 410, 484, 902, 1068, 1126, 1604, 1896
FalI AAGNNNNNCTT 2 cut(s) 831, 863
FaqI GGGAC 2 cut(s) 369, 1926
FatI CATG 7 cut(s) 406, 480, 898, 1064, 1122, 1600, 1892
FokI GGATG 3 cut(s) 728, 1253, 1940
FriOI GRGCYC 1 cut(s) 1905
FspBI CTAG 3 cut(s) 633, 1175, 1524
FspI TGCGCA 1 cut(s) 1989
GlaI GCGC 2 cut(s) 45, 1989
GsaI CCCAGC 2 cut(s) 604, 2123
GsuI CTGGAG 3 cut(s) 1184, 1377, 1604
HaeII RGCGCY 1 cut(s) 47
HaeIII GGCC 4 cut(s) 78, 84, 945, 1421
HapII CCGG 2 cut(s) 47, 2158
HgaI GACGC 3 cut(s) 218, 569, 1928
HhaI GCGC 2 cut(s) 46, 1990
Hin1I GRCGYC 2 cut(s) 44, 210
Hin1II CATG 7 cut(s) 410, 484, 902, 1068, 1126, 1604, 1896
Hin6I GCGC 2 cut(s) 44, 1988
HinP1I GCGC 2 cut(s) 44, 1988
HincII GTYRAC 1 cut(s) 1478
HindII GTYRAC 1 cut(s) 1478
HindIII AAGCTT 4 cut(s) 234, 455, 620, 2006
HpaII CCGG 2 cut(s) 47, 2158
HphI GGTGA 4 cut(s) 463, 1148, 1654, 1769
Hpy166II GTNNAC 3 cut(s) 362, 1454, 1478
Hpy8I GTNNAC 3 cut(s) 362, 1454, 1478
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 6 cut(s) 129, 140, 382, 485, 913, 1228
HpyCH4III ACNGT 3 cut(s) 777, 1858, 2143
HpyCH4IV ACGT 4 cut(s) 358, 1480, 1837, 1963
HpyF10VI GCNNNNNNNGC 8 cut(s) 50, 379, 506, 844, 1148, 1178, 1223, 2129
HpySE526I ACGT 4 cut(s) 358, 1480, 1837, 1963
Hsp92I GRCGYC 2 cut(s) 44, 210
Hsp92II CATG 7 cut(s) 410, 484, 902, 1068, 1126, 1604, 1896
HspAI GCGC 2 cut(s) 44, 1988
KasI GGCGCC 1 cut(s) 43
Kzo9I GATC 5 cut(s) 313, 646, 668, 1555, 1572
LguI GCTCTTC 1 cut(s) 837
LmnI GCTCC 2 cut(s) 376, 2031
LweI GCATC 3 cut(s) 850, 1168, 1750
MaeI CTAG 3 cut(s) 633, 1175, 1524
MaeII ACGT 4 cut(s) 358, 1480, 1837, 1963
MaeIII GTNAC 5 cut(s) 393, 1288, 1701, 1722, 1910
MalI GATC 5 cut(s) 315, 648, 670, 1557, 1574
MboI GATC 5 cut(s) 313, 646, 668, 1555, 1572
MflI RGATCY 2 cut(s) 646, 668
MhlI GDGCHC 2 cut(s) 1905, 2036
Mly113I GGCGCC 1 cut(s) 44
MlyI GAGTC 3 cut(s) 500, 1595, 2156
MmeI TCCRAC 2 cut(s) 912, 990
MslI CAYNNNNRTG 1 cut(s) 903
MspA1I CMGCKG 2 cut(s) 604, 712
MspI CCGG 2 cut(s) 47, 2158
MspR9I CCNGG 4 cut(s) 75, 81, 1056, 1223
Mva1269I GAATGC 1 cut(s) 668
MvaI CCWGG 4 cut(s) 75, 81, 1056, 1223
MwoI GCNNNNNNNGC 8 cut(s) 50, 379, 506, 844, 1148, 1178, 1223, 2129
NarI GGCGCC 1 cut(s) 44
NdeII GATC 5 cut(s) 313, 646, 668, 1555, 1572
NlaIII CATG 7 cut(s) 410, 484, 902, 1068, 1126, 1604, 1896
NlaIV GGNNCC 1 cut(s) 45
NsbI TGCGCA 1 cut(s) 1989
NspI RCATGY 1 cut(s) 1896
PagI TCATGA 2 cut(s) 406, 898
PceI AGGCCT 1 cut(s) 1421
PciSI GCTCTTC 1 cut(s) 837
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 1 cut(s) 668
PflMI CCANNNNNTGG 1 cut(s) 80
Ple19I CGATCG 1 cut(s) 1558
PleI GAGTC 3 cut(s) 499, 1594, 2155
PluTI GGCGCC 1 cut(s) 47
PpsI GAGTC 3 cut(s) 499, 1594, 2155
PshBI ATTAAT 1 cut(s) 1274
Psp124BI GAGCTC 1 cut(s) 1905
Psp6I CCWGG 4 cut(s) 73, 79, 1054, 1221
PspFI CCCAGC 2 cut(s) 600, 2119
PspGI CCWGG 4 cut(s) 73, 79, 1054, 1221
PspN4I GGNNCC 1 cut(s) 45
PspPI GGNCC 3 cut(s) 77, 83, 943
PstI CTGCAG 1 cut(s) 375
PstNI CAGNNNCTG 2 cut(s) 80, 370
PsuI RGATCY 2 cut(s) 646, 668
PvuI CGATCG 1 cut(s) 1558
PvuII CAGCTG 2 cut(s) 604, 712
RsaI GTAC 1 cut(s) 1850
RsaNI GTAC 1 cut(s) 1849
RseI CAYNNNNRTG 1 cut(s) 903
SacI GAGCTC 1 cut(s) 1905
SapI GCTCTTC 1 cut(s) 837
Sau3AI GATC 5 cut(s) 313, 646, 668, 1555, 1572
Sau96I GGNCC 3 cut(s) 77, 83, 943
SchI GAGTC 3 cut(s) 500, 1595, 2156
ScrFI CCNGG 4 cut(s) 75, 81, 1056, 1223
SduI GDGCHC 2 cut(s) 1905, 2036
SfaNI GCATC 3 cut(s) 850, 1168, 1750
SfcI CTRYAG 1 cut(s) 371
SfoI GGCGCC 1 cut(s) 45
SmiMI CAYNNNNRTG 1 cut(s) 903
SmlI CTYRAG 2 cut(s) 214, 446
SmoI CTYRAG 2 cut(s) 214, 446
SseBI AGGCCT 1 cut(s) 1421
SsiI CCGC 8 cut(s) 38, 41, 53, 65, 181, 946, 1264, 1655
SspDI GGCGCC 1 cut(s) 43
SspI AATATT 1 cut(s) 820
SspMI CTAG 3 cut(s) 633, 1175, 1524
SstI GAGCTC 1 cut(s) 1905
StuI AGGCCT 1 cut(s) 1421
StyD4I CCNGG 4 cut(s) 73, 79, 1054, 1221
TaaI ACNGT 3 cut(s) 777, 1858, 2143
TaiI ACGT 4 cut(s) 361, 1483, 1840, 1966
TaqI TCGA 2 cut(s) 99, 1558
TaqII GACCGA 1 cut(s) 1884
TauI GCSGC 5 cut(s) 41, 44, 183, 948, 1658
TscAI CASTG 3 cut(s) 1884, 2134, 2148
TspGWI ACGGA 2 cut(s) 239, 824
TspRI CASTG 3 cut(s) 1884, 2134, 2148
Van91I CCANNNNNTGG 1 cut(s) 80
VspI ATTAAT 1 cut(s) 1274
XagI CCTNNNNNAGG 1 cut(s) 72
XapI RAATTY 5 cut(s) 275, 1088, 1872, 2012, 2110
XbaI TCTAGA 2 cut(s) 632, 1174
XceI RCATGY 1 cut(s) 1896
XcmI CCANNNNNNNNNTGG 2 cut(s) 1943, 2140
XspI CTAG 3 cut(s) 633, 1175, 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.