Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0008539

Physical Location & Seq

Genomic Coordinates Reverse (-)

5619655 .. 5622539

Gene Structure 2885 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1080200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGGCAAACCGTGTAATCCCAGCAGCATCAAAACTCCTGAAAACTATCAGGCCGCTTAACTCCGCCTCCTCCACCACCATCTCTGCCATCTCCCAGCCAATTGGCCACGCCGAAAAAGCACCACACCCCACTACCACCACCACCACCAACGCCGACAGCGTGACCCTCAGCCTTTCCAGCTTTGATGACGCGGACAAGCTCTTTGCGTCGGTCTCCACGTCGCGGCTGTTGAGGGCGGCGCTGAACCTCCACATGGTGGCGGTGGAGCCGATGGTGGATGTTGGGATGTGGGTCATGCGTTCTAGGCTCATGCAGACTCCGTTGATCAAAGACGTGATCTTGGGGTTGATACGGTCAACGATTTATGACCACTTTTGCGCCGGCGAGGACGCTGTCGCCGCCGGAAAGTCGGTGATGGAGCTGAACGAGGCGGGGCTGAGAGGGATGCTGGTTTACGCTTTGGAGTACGCCGGCGACAACGAGGCTTGTGACAGGAACTTGCAAGGGTTCTTGGACACCGCTGAATCCACCAAATCCCTGCCACCTTCTTCGGTGAGCTGTATCATTGTGAAAATCACTGCAATTTGCCCTACGAACCTGCTTAAGCGAGTGAGTGACTTGATGAGATGGCAACATCAAGATCCTTCTTTCCATCTTCCATGGAAGCGCGATACGTTTCCCATTTTCTCCGAATCGAGCCCTCTCTACCATACTCTCGAAAAGCCGGAGCCTTTGACTCCGGAAGAAGAGCGCGATCTCGAGTTAGTCCACCAGAGACTACTAAAACTGTCCCAGAAGTGCGCAGAAGCCAATGTGCCTCTATCCGTCGATGCGGAATACACTTCAATTCAACCGGCCATCGATTACTTGACCTACTCCTCTGCAATCATCTACAACAAAGATGATCACCCGATTGTTTATGGGACGCTTCAAGCTTACTTGAAAGATGCAAAGGAAAGATTGTTGCTGGCAACAAAGGCTGCAGATAAGATGGGTGTTCCAATGGGGTTCAAAGTGGTGAGGGGTGCTTATATGTCAAGTGAAGGAAAATTAGCTTCTTCCTTGGGCTGTAAGTCTCCTATCCACGATTGCATTGAGGATACGCACTCGTGTTACAATGATTGTGCTTCGTTCATGCTCGAAAGGATTGCCAATGGCTCTGACGCAGTGGTTCTTGCAACCCATAATATGGAATCAGGGAGACTGGCAATGGCAAAAGCACATGAAATAGGGGTCGGGAAGGTGCACCAGAAGCTCGAATTTGCACAGCTGTACGGAATGGCAGAATCGCTTTCCTTCGGCCTGAAAAATTCAGGGTTTCAAGTGAGCAAGTACATGCCATTCGGACCGATACAGTTGGTGCTGCCTTACCTGTTAAGGAGGGCTGAAGAGAACAGGGGACTCTTATCTGCTTCATCTCATGACAGAAAACTCACAAGGAAGGAGCTGATGAGGAGACTTAAAGCAGCAATCATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0003674 GO:0003824 GO:0004657 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006536 GO:0006560 GO:0006562 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009063 GO:0009064 GO:0009065 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009987 GO:0010035 GO:0010133 GO:0016054 GO:0016491 GO:0016645 GO:0019752 GO:0036094 GO:0042221 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0046483 GO:0046700 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0071704 GO:0071949 GO:0097159 GO:0098542 GO:1901265 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 ko01110 ko01130 map00330 map01100 map01110 map01130

Pfam Domains

Protein Families

Pro_dh

Protein Analysis

493

Amino Acids

54.2

Weight (kDa)

7.23

Isoelectric Point (pI)

40.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pro_dh	PF01619	141 - 471	4.2e-62	Proline dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008539)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G30775 AT3G30775 AT5G38710 AT5G38710
fragaria_vesca	FvH4_6g45730 FvH4_6g45730
malus_domestica	MD09G1080200.v1.1 MD17G1070700.v1.1 MD17G1206300.v1.1
prunus_persica	Prupe.3G243500_v2.0.a1
pyrus_communis	pycom09g00690 pycom17g07060 pycom17g20950
rosa_chinensis	RchiOBHm_Chr2g0163921
rosa_laevigata	RLG00000021425
rosa_multiflora	Rmu_co8033526.1_g000001
rosa_roxburghii	Rroxscaffold_2G00086930
rosa_rugosa	Rorug02G0505100
rosa_samantha	Rh2AG573400 Rh2BG584100 Rh2CG555000 Rh2DG593600
rosa_wichuraiana	Rw2G047420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	802
Acc36I	ACCTGC	1 cut(s)	606
AccB7I	CCANNNNNTGG	2 cut(s)	256, 1189
AccII	CGCG	4 cut(s)	191, 223, 669, 753
AccIII	TCCGGA	1 cut(s)	739
AclWI	GGATC	1 cut(s)	635
AcoI	YGGCCR	2 cut(s)	103, 855
AcsI	RAATTY	2 cut(s)	1259, 1309
AcuI	CTGAAG	1 cut(s)	1407
AdeI	CACNNNGTG	1 cut(s)	256
AfaI	GTAC	3 cut(s)	467, 1274, 1334
AfiI	CCNNNNNNNGG	4 cut(s)	222, 253, 256, 1189
AflII	CTTAAG	1 cut(s)	602
AgsI	TTSAA	6 cut(s)	846, 851, 932, 943, 1012, 1322
AjiI	CACGTC	2 cut(s)	219, 334
AluBI	AGCT	9 cut(s)	180, 199, 421, 558, 935, 1055, 1255, 1270, 1447
AluI	AGCT	9 cut(s)	180, 199, 421, 558, 935, 1055, 1255, 1270, 1447
Alw21I	GWGCWC	1 cut(s)	1248
Alw26I	GTCTC	5 cut(s)	217, 769, 1080, 1195, 1450
Alw44I	GTGCAC	1 cut(s)	1244
AlwI	GGATC	1 cut(s)	635
Ama87I	CYCGRG	1 cut(s)	758
Aor13HI	TCCGGA	1 cut(s)	739
AoxI	GGCC	4 cut(s)	50, 103, 855, 1300
ApaLI	GTGCAC	1 cut(s)	1244
ApeKI	GCWGC	4 cut(s)	23, 980, 1363, 1466
ApoI	RAATTY	2 cut(s)	1259, 1309
ArsI	GACNNNNNNTTYG	2 cut(s)	185, 217
AspLEI	GCGC	5 cut(s)	241, 380, 669, 753, 803
AspS9I	GGNCC	1 cut(s)	1346
AsuHPI	GGTGA	4 cut(s)	424, 565, 899, 1030
AvaI	CYCGRG	1 cut(s)	758
AvaII	GGWCC	1 cut(s)	1346
BaeGI	GKGCMC	1 cut(s)	1248
BalI	TGGCCA	1 cut(s)	105
BanII	GRGCYC	1 cut(s)	701
BauI	CACGAG	1 cut(s)	1108
Bbv12I	GWGCWC	1 cut(s)	1248
BbvCI	CCTCAGC	1 cut(s)	167
BbvI	GCAGC	3 cut(s)	35, 967, 1350
BccI	CCATC	8 cut(s)	86, 95, 265, 409, 621, 660, 866, 985
BcgI	CGANNNNNNTGC	2 cut(s)	1130, 1164
BciVI	GTATCC	1 cut(s)	1093
BclI	TGATCA	2 cut(s)	324, 904
BcoDI	GTCTC	5 cut(s)	217, 769, 1080, 1195, 1450
BfaI	CTAG	1 cut(s)	303
BfmI	CTRYAG	1 cut(s)	981
BfoI	RGCGCY	1 cut(s)	242
BfrI	CTTAAG	1 cut(s)	602
BfuAI	ACCTGC	1 cut(s)	606
BfuI	GTATCC	1 cut(s)	1093
BisI	GCNGC	8 cut(s)	24, 53, 224, 237, 399, 981, 1364, 1467
BlsI	GCNGC	8 cut(s)	25, 54, 225, 238, 400, 982, 1365, 1468
Bme18I	GGWCC	1 cut(s)	1346
BmeT110I	CYCGRG	1 cut(s)	758
BmgBI	CACGTC	2 cut(s)	219, 334
BmgT120I	GGNCC	1 cut(s)	1346
BmiI	GGNNCC	2 cut(s)	267, 729
BmsI	GCATC	4 cut(s)	35, 435, 820, 937
Bpu10I	CCTNAGC	1 cut(s)	167
Bsa29I	ATCGAT	1 cut(s)	861
BsaI	GGTCTC	1 cut(s)	217
BsaJI	CCNNGG	2 cut(s)	659, 1062
BsaWI	WCCGGW	1 cut(s)	739
BsaXI	ACNNNNNCTCC	2 cut(s)	50, 80
Bsc4I	CCNNNNNNNGG	4 cut(s)	222, 253, 256, 1189
Bse118I	RCCGGY	3 cut(s)	380, 470, 853
Bse1I	ACTGG	1 cut(s)	1209
Bse3DI	GCAATG	1 cut(s)	1215
BseAI	TCCGGA	1 cut(s)	739
BseCI	ATCGAT	1 cut(s)	861
BseDI	CCNNGG	2 cut(s)	659, 1062
BseGI	GGATG	3 cut(s)	283, 291, 450
BseLI	CCNNNNNNNGG	4 cut(s)	222, 253, 256, 1189
BseMI	GCAATG	1 cut(s)	1215
BseMII	CTCAG	2 cut(s)	181, 428
BseNI	ACTGG	1 cut(s)	1209
BseRI	GAGGAG	3 cut(s)	58, 868, 1468
BseSI	GKGCMC	1 cut(s)	1248
BseXI	GCAGC	3 cut(s)	35, 967, 1350
BseYI	CCCAGC	2 cut(s)	19, 93
Bsh1236I	CGCG	4 cut(s)	191, 223, 669, 753
BshFI	GGCC	4 cut(s)	52, 105, 857, 1302
BshVI	ATCGAT	1 cut(s)	861
BsiHKAI	GWGCWC	1 cut(s)	1248
BsiHKCI	CYCGRG	1 cut(s)	758
BsiSI	CCGG	6 cut(s)	381, 402, 471, 725, 740, 854
BslFI	GGGAC	3 cut(s)	775, 937, 1413
BslI	CCNNNNNNNGG	4 cut(s)	222, 253, 256, 1189
BsmAI	GTCTC	5 cut(s)	217, 769, 1080, 1195, 1450
BsmFI	GGGAC	3 cut(s)	775, 937, 1413
BsnI	GGCC	4 cut(s)	52, 105, 857, 1302
Bso31I	GGTCTC	1 cut(s)	217
BsoBI	CYCGRG	1 cut(s)	758
Bsp1286I	GDGCHC	2 cut(s)	701, 1248
Bsp13I	TCCGGA	1 cut(s)	739
Bsp143I	GATC	5 cut(s)	324, 336, 640, 754, 904
Bsp19I	CCATGG	1 cut(s)	659
BspANI	GGCC	4 cut(s)	52, 105, 857, 1302
BspCNI	CTCAG	2 cut(s)	180, 429
BspDI	ATCGAT	1 cut(s)	861
BspEI	TCCGGA	1 cut(s)	739
BspFNI	CGCG	4 cut(s)	191, 223, 669, 753
BspHI	TCATGA	1 cut(s)	1420
BspLI	GGNNCC	2 cut(s)	267, 729
BspMAI	CTGCAG	1 cut(s)	985
BspMI	ACCTGC	1 cut(s)	606
BspPI	GGATC	1 cut(s)	635
BspQI	GCTCTTC	1 cut(s)	741
BspTI	CTTAAG	1 cut(s)	602
BspTNI	GGTCTC	1 cut(s)	217
BsrDI	GCAATG	1 cut(s)	1215
BsrFI	RCCGGY	3 cut(s)	380, 470, 853
BsrI	ACTGG	1 cut(s)	1209
BssAI	RCCGGY	3 cut(s)	380, 470, 853
BssECI	CCNNGG	2 cut(s)	659, 1062
BssMI	GATC	5 cut(s)	324, 336, 640, 754, 904
BssSI	CACGAG	1 cut(s)	1108
BssT1I	CCWWGG	2 cut(s)	659, 1062
Bst2BI	CACGAG	1 cut(s)	1108
Bst4CI	ACNGT	4 cut(s)	11, 354, 789, 1356
Bst6I	CTCTTC	2 cut(s)	741, 1383
BstAFI	CTTAAG	1 cut(s)	602
BstC8I	GCNNGC	3 cut(s)	382, 472, 969
BstDEI	CTNAG	2 cut(s)	167, 437
BstDSI	CCRYGG	1 cut(s)	659
BstF5I	GGATG	3 cut(s)	283, 291, 450
BstFNI	CGCG	4 cut(s)	191, 223, 669, 753
BstH2I	RGCGCY	1 cut(s)	242
BstHHI	GCGC	5 cut(s)	241, 380, 669, 753, 803
BstKTI	GATC	5 cut(s)	327, 339, 643, 757, 907
BstMAI	GTCTC	5 cut(s)	217, 769, 1080, 1195, 1450
BstMBI	GATC	5 cut(s)	324, 336, 640, 754, 904
BstMWI	GCNNNNNNNGC	6 cut(s)	116, 177, 304, 398, 977, 1252
BstNSI	RCATGY	1 cut(s)	1339
BstSFI	CTRYAG	1 cut(s)	981
BstSLI	GKGCMC	1 cut(s)	1248
BstUI	CGCG	4 cut(s)	191, 223, 669, 753
BstV1I	GCAGC	3 cut(s)	35, 967, 1350
BstX2I	RGATCY	1 cut(s)	640
BstXI	CCANNNNNNTGG	1 cut(s)	101
BstYI	RGATCY	1 cut(s)	640
Bsu15I	ATCGAT	1 cut(s)	861
BsuI	GTATCC	1 cut(s)	1093
BsuRI	GGCC	4 cut(s)	52, 105, 857, 1302
BsuTUI	ATCGAT	1 cut(s)	861
BtgI	CCRYGG	1 cut(s)	659
BtrI	CACGTC	2 cut(s)	219, 334
BtsCI	GGATG	3 cut(s)	283, 291, 450
BtsI	GCAGTG	2 cut(s)	576, 1173
BtsIMutI	CAGTG	2 cut(s)	576, 1173
BveI	ACCTGC	1 cut(s)	606
Cac8I	GCNNGC	3 cut(s)	382, 472, 969
CciI	TCATGA	1 cut(s)	1420
CfoI	GCGC	5 cut(s)	241, 380, 669, 753, 803
Cfr10I	RCCGGY	3 cut(s)	380, 470, 853
Cfr13I	GGNCC	1 cut(s)	1346
ClaI	ATCGAT	1 cut(s)	861
CpoI	CGGWCCG	1 cut(s)	1346
CseI	GACGC	5 cut(s)	195, 197, 398, 934, 1172
Csp6I	GTAC	3 cut(s)	466, 1273, 1333
CspI	CGGWCCG	1 cut(s)	1346
CviAII	CATG	8 cut(s)	253, 295, 310, 660, 1135, 1223, 1336, 1421
CviQI	GTAC	3 cut(s)	466, 1273, 1333
DdeI	CTNAG	2 cut(s)	167, 437
DpnI	GATC	5 cut(s)	326, 338, 642, 756, 906
DpnII	GATC	5 cut(s)	324, 336, 640, 754, 904
DraIII	CACNNNGTG	1 cut(s)	256
EaeI	YGGCCR	2 cut(s)	103, 855
Eam1104I	CTCTTC	2 cut(s)	741, 1383
EarI	CTCTTC	2 cut(s)	741, 1383
EciI	GGCGGA	1 cut(s)	52
Eco130I	CCWWGG	2 cut(s)	659, 1062
Eco24I	GRGCYC	1 cut(s)	701
Eco31I	GGTCTC	1 cut(s)	217
Eco47I	GGWCC	1 cut(s)	1346
Eco57I	CTGAAG	1 cut(s)	1407
Eco88I	CYCGRG	1 cut(s)	758
EcoT14I	CCWWGG	2 cut(s)	659, 1062
EcoT38I	GRGCYC	1 cut(s)	701
ErhI	CCWWGG	2 cut(s)	659, 1062
FaeI	CATG	8 cut(s)	256, 298, 313, 663, 1138, 1226, 1339, 1424
FaqI	GGGAC	3 cut(s)	775, 937, 1413
FatI	CATG	8 cut(s)	252, 294, 309, 659, 1134, 1222, 1335, 1420
FauI	CCCGC	1 cut(s)	424
FbaI	TGATCA	2 cut(s)	324, 904
Fnu4HI	GCNGC	8 cut(s)	24, 53, 224, 237, 399, 981, 1364, 1467
FokI	GGATG	3 cut(s)	290, 298, 457
FriOI	GRGCYC	1 cut(s)	701
Fsp4HI	GCNGC	8 cut(s)	24, 53, 224, 237, 399, 981, 1364, 1467
FspBI	CTAG	1 cut(s)	303
FspI	TGCGCA	1 cut(s)	802
GlaI	GCGC	5 cut(s)	240, 379, 668, 752, 802
GluI	GCNGC	8 cut(s)	24, 53, 224, 237, 399, 981, 1364, 1467
GsaI	CCCAGC	2 cut(s)	23, 97
HaeII	RGCGCY	1 cut(s)	242
HaeIII	GGCC	4 cut(s)	52, 105, 857, 1302
HapII	CCGG	6 cut(s)	381, 402, 471, 725, 740, 854
HgaI	GACGC	5 cut(s)	195, 197, 398, 934, 1172
HhaI	GCGC	5 cut(s)	241, 380, 669, 753, 803
Hin1II	CATG	8 cut(s)	256, 298, 313, 663, 1138, 1226, 1339, 1424
Hin6I	GCGC	5 cut(s)	239, 378, 667, 751, 801
HinP1I	GCGC	5 cut(s)	239, 378, 667, 751, 801
HincII	GTYRAC	1 cut(s)	357
HindII	GTYRAC	1 cut(s)	357
HindIII	AAGCTT	1 cut(s)	933
HinfI	GANTC	7 cut(s)	316, 524, 692, 736, 1193, 1286, 1401
HpaII	CCGG	6 cut(s)	381, 402, 471, 725, 740, 854
HphI	GGTGA	4 cut(s)	424, 565, 899, 1030
Hpy166II	GTNNAC	4 cut(s)	357, 454, 769, 1246
Hpy188I	TCNGA	3 cut(s)	691, 1162, 1346
Hpy188III	TCNNGA	7 cut(s)	37, 638, 716, 740, 758, 1237, 1421
Hpy8I	GTNNAC	4 cut(s)	357, 454, 769, 1246
Hpy99I	CGWCG	3 cut(s)	211, 223, 830
HpyAV	CCTTC	6 cut(s)	555, 654, 1037, 1234, 1306, 1435
HpyCH4III	ACNGT	4 cut(s)	11, 354, 789, 1356
HpyCH4IV	ACGT	3 cut(s)	218, 333, 674
HpyF10VI	GCNNNNNNNGC	6 cut(s)	116, 177, 304, 398, 977, 1252
HpyF3I	CTNAG	2 cut(s)	167, 437
HpySE526I	ACGT	3 cut(s)	218, 333, 674
Hsp92II	CATG	8 cut(s)	256, 298, 313, 663, 1138, 1226, 1339, 1424
HspAI	GCGC	5 cut(s)	239, 378, 667, 751, 801
Kpn2I	TCCGGA	1 cut(s)	739
KroI	GCCGGC	2 cut(s)	380, 470
KroNI	GCCGGC	2 cut(s)	382, 472
Ksp22I	TGATCA	2 cut(s)	324, 904
Kzo9I	GATC	5 cut(s)	324, 336, 640, 754, 904
LguI	GCTCTTC	1 cut(s)	741
LmnI	GCTCC	4 cut(s)	265, 418, 727, 1444
Lsp1109I	GCAGC	3 cut(s)	35, 967, 1350
LweI	GCATC	4 cut(s)	35, 435, 820, 937
MaeI	CTAG	1 cut(s)	303
MaeII	ACGT	3 cut(s)	218, 333, 674
MaeIII	GTNAC	4 cut(s)	160, 488, 614, 1112
MalI	GATC	5 cut(s)	326, 338, 642, 756, 906
MboI	GATC	5 cut(s)	324, 336, 640, 754, 904
MboII	GAAGA	6 cut(s)	540, 647, 755, 758, 1050, 1400
MfeI	CAATTG	1 cut(s)	99
MflI	RGATCY	1 cut(s)	640
MhlI	GDGCHC	2 cut(s)	701, 1248
MlsI	TGGCCA	1 cut(s)	105
MluCI	AATT	6 cut(s)	99, 582, 846, 1049, 1259, 1309
MluNI	TGGCCA	1 cut(s)	105
MlyI	GAGTC	3 cut(s)	310, 730, 1395
Mox20I	TGGCCA	1 cut(s)	105
MreI	CGCCGGCG	2 cut(s)	380, 470
MroI	TCCGGA	1 cut(s)	739
MroNI	GCCGGC	2 cut(s)	380, 470
MscI	TGGCCA	1 cut(s)	105
MseI	TTAA	4 cut(s)	57, 603, 1376, 1461
Msp20I	TGGCCA	1 cut(s)	105
MspA1I	CMGCKG	2 cut(s)	521, 1270
MspCI	CTTAAG	1 cut(s)	602
MspI	CCGG	6 cut(s)	381, 402, 471, 725, 740, 854
MunI	CAATTG	1 cut(s)	99
MvnI	CGCG	4 cut(s)	191, 223, 669, 753
MwoI	GCNNNNNNNGC	6 cut(s)	116, 177, 304, 398, 977, 1252
NaeI	GCCGGC	2 cut(s)	382, 472
NcoI	CCATGG	1 cut(s)	659
NdeII	GATC	5 cut(s)	324, 336, 640, 754, 904
NgoMIV	GCCGGC	2 cut(s)	380, 470
NlaIII	CATG	8 cut(s)	256, 298, 313, 663, 1138, 1226, 1339, 1424
NlaIV	GGNNCC	2 cut(s)	267, 729
NmuCI	GTSAC	3 cut(s)	160, 488, 614
NsbI	TGCGCA	1 cut(s)	802
NspI	RCATGY	1 cut(s)	1339
PaeR7I	CTCGAG	1 cut(s)	758
PagI	TCATGA	1 cut(s)	1420
PciSI	GCTCTTC	1 cut(s)	741
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 215
PdiI	GCCGGC	2 cut(s)	382, 472
PfeI	GAWTC	4 cut(s)	524, 692, 1193, 1286
PflFI	GACNNNGTC	1 cut(s)	392
PflMI	CCANNNNNTGG	2 cut(s)	256, 1189
PkrI	GCNGC	8 cut(s)	25, 54, 225, 238, 400, 982, 1365, 1468
PleI	GAGTC	3 cut(s)	310, 730, 1395
PpsI	GAGTC	3 cut(s)	310, 730, 1395
PspFI	CCCAGC	2 cut(s)	19, 93
PspN4I	GGNNCC	2 cut(s)	267, 729
PspPI	GGNCC	1 cut(s)	1346
PstI	CTGCAG	1 cut(s)	985
PsuI	RGATCY	1 cut(s)	640
PsyI	GACNNNGTC	1 cut(s)	392
PvuII	CAGCTG	1 cut(s)	1270
RsaI	GTAC	3 cut(s)	467, 1274, 1334
RsaNI	GTAC	3 cut(s)	466, 1273, 1333
Rsr2I	CGGWCCG	1 cut(s)	1346
RsrII	CGGWCCG	1 cut(s)	1346
SapI	GCTCTTC	1 cut(s)	741
SaqAI	TTAA	4 cut(s)	57, 603, 1376, 1461
SatI	GCNGC	8 cut(s)	24, 53, 224, 237, 399, 981, 1364, 1467
Sau3AI	GATC	5 cut(s)	324, 336, 640, 754, 904
Sau96I	GGNCC	1 cut(s)	1346
SchI	GAGTC	3 cut(s)	310, 730, 1395
SduI	GDGCHC	2 cut(s)	701, 1248
SfaNI	GCATC	4 cut(s)	35, 435, 820, 937
SfcI	CTRYAG	1 cut(s)	981
Sfr274I	CTCGAG	1 cut(s)	758
SgrAI	CRCCGGYG	2 cut(s)	380, 470
SinI	GGWCC	1 cut(s)	1346
SlaI	CTCGAG	1 cut(s)	758
SmlI	CTYRAG	2 cut(s)	602, 758
SmoI	CTYRAG	2 cut(s)	602, 758
Sse9I	AATT	6 cut(s)	99, 582, 846, 1049, 1259, 1309
SspMI	CTAG	1 cut(s)	303
StyI	CCWWGG	2 cut(s)	659, 1062
TaaI	ACNGT	4 cut(s)	11, 354, 789, 1356
TaiI	ACGT	3 cut(s)	221, 336, 677
TaqI	TCGA	7 cut(s)	695, 717, 759, 828, 861, 1140, 1257
TaqII	GACCGA	2 cut(s)	199, 1363
TasI	AATT	6 cut(s)	99, 582, 846, 1049, 1259, 1309
TatI	WGTACW	1 cut(s)	1332
TauI	GCSGC	4 cut(s)	55, 226, 239, 401
TfiI	GAWTC	4 cut(s)	524, 692, 1193, 1286
Tru1I	TTAA	4 cut(s)	57, 603, 1376, 1461
Tru9I	TTAA	4 cut(s)	57, 603, 1376, 1461
TscAI	CASTG	2 cut(s)	583, 1173
TseFI	GTSAC	3 cut(s)	160, 488, 614
TseI	GCWGC	4 cut(s)	23, 980, 1363, 1466
Tsp45I	GTSAC	3 cut(s)	160, 488, 614
TspDTI	ATGAA	3 cut(s)	1123, 1239, 1404
TspGWI	ACGGA	3 cut(s)	309, 814, 1290
TspRI	CASTG	2 cut(s)	583, 1173
Tth111I	GACNNNGTC	1 cut(s)	392
Van91I	CCANNNNNTGG	2 cut(s)	256, 1189
Vha464I	CTTAAG	1 cut(s)	602
VneI	GTGCAC	1 cut(s)	1244
VpaK11BI	GGWCC	1 cut(s)	1346
XapI	RAATTY	2 cut(s)	1259, 1309
XceI	RCATGY	1 cut(s)	1339
XhoI	CTCGAG	1 cut(s)	758
XspI	CTAG	1 cut(s)	303

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.