Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0008539

Physical Location & Seq

Genomic Coordinates Reverse (-)

9051028 .. 9054185

Gene Structure 3158 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00086930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGCCAACCGTGTAATCCCAGCAGCACAGAGACTCCTGAAGACGCTCCGCCCTCTCAACTCGGCTTCCTCCGCCACCATCTCCGGCGTTTCGCCGATCACCTTCCCTGAAAAGGCCCAACCCGAAGCGGAGGAGGAGCTGCTGCTGCCGCCCCTGGACGGCCACCACCCCAAAGCAGCGGAGGCCTTGTTCAACCTCGACGACGAGAACAACAGGCTGTTTGCGTCGGTTCCTACGTTGAAGCTGCTCCGCGCGGCGGCGAATCTCCACATGGTGGCGATGGAGCCGATGGTGGACGTGGGAATGTGGATGATGAGGTCGAGGCTGATGACGACGCCCGGGGTCAAAGACGTCATTTTGGGGTTCATAAGGTCCACGTTTTACGAGCACTTTTGCGCCGGTGAGGACACCGTGGCGACCGGTGAGTCGGTTCGCGCGCTCAACGAGGCGGGGCTAAGGGGCATGCTGGTCTACGCCTTAGAGTACGCCAGCGACAACGAGTCATGTGATCGGAACTTGCAGGGCTTCATGGACACCGTTGAATCCACAAAGTCCCTTCCTCGTTCTTCTGTGAGCTTTATTATACTCAAGATTACTGCAATATGCCCCATGAAGCTTCTCCAGCGGGTTAGTGACTTGCTGAGATGGCAACAGAAAGACCCCTCTTTCAATCTTCCATGGAAGCATGAGACTCTACCCATTTTCTCGGAATCCAGCCCTCTCTATCATACAATGGAAAAACCCGAACCTTTAACTCCGGAAGAAGAGCGTGATCTCGAGTTAGTCCATCAGAGACTACAAAGACTATCCGAAAAGTGCGTAGAAGCTAATGTCCCTCTATCGGTGGATGCAGAGTACACATCGATTCAGCCTTCCATTGATTACTTGACATACGCTTCTGCAATCAAGCACAATAAAGGTGACAACCCAATTGTTTACGGTACAATCCAAGCTTATTTGAAAGATGCAAAGGAAAGATTGTTGCTAGCATCAAAGGCTGCAGACAAGATGGGCATTCCGATGGGTTTCAAAGTGGTGAGGGGTGCTTATATGTCAAGTGAAAGTAAAGTAGCTTCTGCCTTGGGCTATGACTCTCCCATTCACAACAGCATTGAGGAGACACACGCGTGCTACAACGAGTGTGCTTCGTACATGCTTGAGAGAATTGGAAATGGCTCCGGCGCTGTTGTTCTCGCAACCCATAATGTAGAATCTGGGAAACTGGCTGTGAAAAAAGCACATGAAATTGGGATCAGCAAGGTGCACCAGAAGCTCGAATTTGCTCAGCTGTATGGAATGGCAGAAGCACTTTCCTTTGGTCTGAAAGACGCAGGGTTTCAAGTCAGCAAGTATATGCCATTTGGACCTATAGAATTAGTGATGCCTTACCTTTTACGGAGGGCTGAAGAAAACCGAGGGCTTTTATCTGCTTCAACTCTAGACAGAAACCTTACCAGGGAGGAGTTGAAAAGGAGACTCAAAGCAGCAATTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0003674 GO:0003824 GO:0004657 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006536 GO:0006560 GO:0006562 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009063 GO:0009064 GO:0009065 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009987 GO:0010035 GO:0010133 GO:0016054 GO:0016491 GO:0016645 GO:0019752 GO:0036094 GO:0042221 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0046483 GO:0046700 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0071704 GO:0071949 GO:0097159 GO:0098542 GO:1901265 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 ko01110 ko01130 map00330 map01100 map01110 map01130

Pfam Domains

Protein Families

Pro_dh

Protein Analysis

498

Amino Acids

55.36

Weight (kDa)

6.27

Isoelectric Point (pI)

49.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pro_dh	PF01619	179 - 474	1.4e-65	Proline dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008539)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G30775 AT3G30775 AT5G38710 AT5G38710
fragaria_vesca	FvH4_6g45730 FvH4_6g45730
malus_domestica	MD09G1080200.v1.1 MD17G1070700.v1.1 MD17G1206300.v1.1
prunus_persica	Prupe.3G243500_v2.0.a1
pyrus_communis	pycom09g00690 pycom17g07060 pycom17g20950
rosa_chinensis	RchiOBHm_Chr2g0163921
rosa_laevigata	RLG00000021425
rosa_multiflora	Rmu_co8033526.1_g000001
rosa_roxburghii	Rroxscaffold_2G00086930
rosa_rugosa	Rorug02G0505100
rosa_samantha	Rh2AG573400 Rh2BG584100 Rh2CG555000 Rh2DG593600
rosa_wichuraiana	Rw2G047420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	424
AatII	GACGTC	1 cut(s)	354
AccB7I	CCANNNNNTGG	1 cut(s)	274
AccI	GTMKAC	1 cut(s)	471
AccII	CGCG	5 cut(s)	252, 254, 435, 437, 1127
AccIII	TCCGGA	1 cut(s)	757
AclWI	GGATC	1 cut(s)	1259
AcoI	YGGCCR	2 cut(s)	3, 160
AcsI	RAATTY	1 cut(s)	1277
AcuI	CTGAAG	2 cut(s)	59, 1425
AcyI	GRCGYC	2 cut(s)	335, 351
AdeI	CACNNNGTG	1 cut(s)	274
AfaI	GTAC	4 cut(s)	485, 857, 943, 1151
AfiI	CCNNNNNNNGG	6 cut(s)	112, 158, 256, 274, 841, 1456
AflIII	ACRYGT	1 cut(s)	1125
AgeI	ACCGGT	1 cut(s)	419
AgsI	TTSAA	9 cut(s)	193, 241, 542, 670, 961, 1030, 1340, 1434, 1468
AhdI	GACNNNNNGTC	1 cut(s)	499
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	2 cut(s)	153, 1454
AleI	CACNNNNGTG	1 cut(s)	1126
AloI	GAACNNNNNNTCC	2 cut(s)	173, 205
AluBI	AGCT	9 cut(s)	139, 244, 576, 616, 827, 953, 1073, 1273, 1288
AluI	AGCT	9 cut(s)	139, 244, 576, 616, 827, 953, 1073, 1273, 1288
Alw21I	GWGCWC	2 cut(s)	390, 1266
Alw26I	GTCTC	5 cut(s)	25, 683, 787, 1112, 1468
Alw44I	GTGCAC	1 cut(s)	1262
AlwI	GGATC	1 cut(s)	1259
Ama87I	CYCGRG	2 cut(s)	338, 776
Aor13HI	TCCGGA	1 cut(s)	757
AoxI	GGCC	4 cut(s)	3, 114, 160, 183
ApaLI	GTGCAC	1 cut(s)	1262
ApeKI	GCWGC	8 cut(s)	23, 139, 142, 145, 176, 244, 998, 1484
ApoI	RAATTY	1 cut(s)	1277
AsiGI	ACCGGT	1 cut(s)	419
AspLEI	GCGC	5 cut(s)	254, 398, 437, 439, 1184
AspS9I	GGNCC	3 cut(s)	115, 372, 1364
AsuC2I	CCSGG	2 cut(s)	339, 340
AsuHPI	GGTGA	5 cut(s)	91, 413, 434, 932, 1048
AsuNHI	GCTAGC	1 cut(s)	985
AvaI	CYCGRG	2 cut(s)	338, 776
AvaII	GGWCC	2 cut(s)	372, 1364
BaeGI	GKGCMC	1 cut(s)	1266
BalI	TGGCCA	1 cut(s)	5
BarI	GAAGNNNNNNTAC	2 cut(s)	1057, 1089
BbsI	GAAGAC	1 cut(s)	47
Bbv12I	GWGCWC	2 cut(s)	390, 1266
BbvI	GCAGC	7 cut(s)	35, 126, 129, 132, 188, 231, 985
BccI	CCATC	7 cut(s)	86, 274, 283, 639, 795, 1003, 1015
BceAI	ACGGC	1 cut(s)	175
BciT130I	CCWGG	2 cut(s)	155, 1456
BcnI	CCSGG	2 cut(s)	339, 340
BcoDI	GTCTC	5 cut(s)	25, 683, 787, 1112, 1468
BfaI	CTAG	2 cut(s)	986, 1439
BfmI	CTRYAG	2 cut(s)	999, 1368
BfoI	RGCGCY	1 cut(s)	1185
BlpI	GCTNAGC	1 cut(s)	1284
Bme1390I	CCNGG	4 cut(s)	155, 339, 340, 1456
Bme18I	GGWCC	2 cut(s)	372, 1364
BmeRI	GACNNNNNGTC	1 cut(s)	499
BmeT110I	CYCGRG	2 cut(s)	338, 776
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	3 cut(s)	115, 372, 1364
BmiI	GGNNCC	3 cut(s)	231, 285, 1177
BmrFI	CCNGG	4 cut(s)	155, 339, 340, 1456
BmsI	GCATC	4 cut(s)	838, 955, 998, 1371
BmtI	GCTAGC	1 cut(s)	989
BpiI	GAAGAC	1 cut(s)	47
BpmI	CTGGAG	1 cut(s)	605
Bpu10I	CCTNAGC	1 cut(s)	455
Bpu1102I	GCTNAGC	1 cut(s)	1284
BpuEI	CTTGAG	2 cut(s)	572, 1178
BpuMI	CCSGG	2 cut(s)	339, 340
Bsa29I	ATCGAT	1 cut(s)	863
BsaHI	GRCGYC	2 cut(s)	335, 351
BsaJI	CCNNGG	8 cut(s)	153, 338, 339, 411, 677, 1080, 1414, 1455
BsaWI	WCCGGW	2 cut(s)	419, 757
BsaXI	ACNNNNNCTCC	4 cut(s)	18, 48, 173, 203
Bsc4I	CCNNNNNNNGG	6 cut(s)	112, 158, 256, 274, 841, 1456
Bse118I	RCCGGY	2 cut(s)	398, 419
Bse1I	ACTGG	1 cut(s)	1227
BseAI	TCCGGA	1 cut(s)	757
BseBI	CCWGG	2 cut(s)	155, 1456
BseCI	ATCGAT	1 cut(s)	863
BseDI	CCNNGG	8 cut(s)	153, 338, 339, 411, 677, 1080, 1414, 1455
BseGI	GGATG	2 cut(s)	315, 853
BseLI	CCNNNNNNNGG	6 cut(s)	112, 158, 256, 274, 841, 1456
BseMII	CTCAG	2 cut(s)	632, 1298
BseNI	ACTGG	1 cut(s)	1227
BsePI	GCGCGC	1 cut(s)	435
BseRI	GAGGAG	4 cut(s)	146, 149, 1130, 1475
BseSI	GKGCMC	1 cut(s)	1266
BseXI	GCAGC	7 cut(s)	35, 126, 129, 132, 188, 231, 985
BseYI	CCCAGC	1 cut(s)	19
Bsh1236I	CGCG	5 cut(s)	252, 254, 435, 437, 1127
Bsh1285I	CGRYCG	1 cut(s)	420
BshFI	GGCC	4 cut(s)	5, 116, 162, 185
BshTI	ACCGGT	1 cut(s)	419
BshVI	ATCGAT	1 cut(s)	863
BsiEI	CGRYCG	1 cut(s)	420
BsiHKAI	GWGCWC	2 cut(s)	390, 1266
BsiHKCI	CYCGRG	2 cut(s)	338, 776
BsiSI	CCGG	6 cut(s)	84, 339, 399, 420, 758, 1179
BslFI	GGGAC	2 cut(s)	538, 818
BslI	CCNNNNNNNGG	6 cut(s)	112, 158, 256, 274, 841, 1456
BsmAI	GTCTC	5 cut(s)	25, 683, 787, 1112, 1468
BsmFI	GGGAC	2 cut(s)	538, 818
BsmI	GAATGC	1 cut(s)	1014
BsnI	GGCC	4 cut(s)	5, 116, 162, 185
BsoBI	CYCGRG	2 cut(s)	338, 776
Bsp1286I	GDGCHC	2 cut(s)	390, 1266
Bsp13I	TCCGGA	1 cut(s)	757
Bsp143I	GATC	4 cut(s)	96, 508, 772, 1251
Bsp1720I	GCTNAGC	1 cut(s)	1284
Bsp19I	CCATGG	1 cut(s)	677
BspANI	GGCC	4 cut(s)	5, 116, 162, 185
BspCNI	CTCAG	2 cut(s)	633, 1297
BspDI	ATCGAT	1 cut(s)	863
BspEI	TCCGGA	1 cut(s)	757
BspFNI	CGCG	5 cut(s)	252, 254, 435, 437, 1127
BspLI	GGNNCC	3 cut(s)	231, 285, 1177
BspMAI	CTGCAG	1 cut(s)	1003
BspOI	GCTAGC	1 cut(s)	989
BspPI	GGATC	1 cut(s)	1259
BspQI	GCTCTTC	1 cut(s)	759
BsrFI	RCCGGY	2 cut(s)	398, 419
BsrI	ACTGG	1 cut(s)	1227
BssAI	RCCGGY	2 cut(s)	398, 419
BssECI	CCNNGG	8 cut(s)	153, 338, 339, 411, 677, 1080, 1414, 1455
BssHII	GCGCGC	1 cut(s)	435
BssMI	GATC	4 cut(s)	96, 508, 772, 1251
BssNI	GRCGYC	2 cut(s)	335, 351
BssT1I	CCWWGG	2 cut(s)	677, 1080
Bst2UI	CCWGG	2 cut(s)	155, 1456
Bst4CI	ACNGT	4 cut(s)	11, 412, 538, 941
Bst6I	CTCTTC	1 cut(s)	759
BstACI	GRCGYC	2 cut(s)	335, 351
BstC8I	GCNNGC	5 cut(s)	437, 464, 490, 987, 1129
BstDEI	CTNAG	4 cut(s)	455, 478, 641, 1284
BstDSI	CCRYGG	2 cut(s)	411, 677
BstF5I	GGATG	2 cut(s)	315, 853
BstFNI	CGCG	5 cut(s)	252, 254, 435, 437, 1127
BstH2I	RGCGCY	1 cut(s)	1185
BstHHI	GCGC	5 cut(s)	254, 398, 437, 439, 1184
BstKTI	GATC	4 cut(s)	99, 511, 775, 1254
BstMAI	GTCTC	5 cut(s)	25, 683, 787, 1112, 1468
BstMBI	GATC	4 cut(s)	96, 508, 772, 1251
BstMCI	CGRYCG	1 cut(s)	420
BstMWI	GCNNNNNNNGC	8 cut(s)	71, 145, 148, 182, 622, 646, 995, 1270
BstNI	CCWGG	2 cut(s)	155, 1456
BstNSI	RCATGY	2 cut(s)	466, 1156
BstSCI	CCNGG	4 cut(s)	153, 337, 338, 1454
BstSFI	CTRYAG	2 cut(s)	999, 1368
BstSLI	GKGCMC	1 cut(s)	1266
BstUI	CGCG	5 cut(s)	252, 254, 435, 437, 1127
BstV1I	GCAGC	7 cut(s)	35, 126, 129, 132, 188, 231, 985
BstV2I	GAAGAC	1 cut(s)	47
Bsu15I	ATCGAT	1 cut(s)	863
BsuRI	GGCC	4 cut(s)	5, 116, 162, 185
BsuTUI	ATCGAT	1 cut(s)	863
BtgI	CCRYGG	2 cut(s)	411, 677
BtgZI	GCGATG	1 cut(s)	293
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	2 cut(s)	315, 853
Cac8I	GCNNGC	5 cut(s)	437, 464, 490, 987, 1129
CfoI	GCGC	5 cut(s)	254, 398, 437, 439, 1184
Cfr10I	RCCGGY	2 cut(s)	398, 419
Cfr13I	GGNCC	3 cut(s)	115, 372, 1364
Cfr9I	CCCGGG	1 cut(s)	338
ClaI	ATCGAT	1 cut(s)	863
CseI	GACGC	4 cut(s)	52, 213, 343, 1337
Csp6I	GTAC	4 cut(s)	484, 856, 942, 1150
CspAI	ACCGGT	1 cut(s)	419
CviAII	CATG	9 cut(s)	271, 463, 504, 529, 610, 678, 686, 1153, 1241
CviQI	GTAC	4 cut(s)	484, 856, 942, 1150
DdeI	CTNAG	4 cut(s)	455, 478, 641, 1284
DpnI	GATC	4 cut(s)	98, 510, 774, 1253
DpnII	GATC	4 cut(s)	96, 508, 772, 1251
DraIII	CACNNNGTG	1 cut(s)	274
DrdI	GACNNNNNNGTC	1 cut(s)	424
DriI	GACNNNNNGTC	1 cut(s)	499
DseDI	GACNNNNNNGTC	1 cut(s)	424
EaeI	YGGCCR	2 cut(s)	3, 160
Eam1104I	CTCTTC	1 cut(s)	759
Eam1105I	GACNNNNNGTC	1 cut(s)	499
EarI	CTCTTC	1 cut(s)	759
EciI	GGCGGA	2 cut(s)	38, 61
Eco130I	CCWWGG	2 cut(s)	677, 1080
Eco147I	AGGCCT	1 cut(s)	185
Eco47I	GGWCC	2 cut(s)	372, 1364
Eco57I	CTGAAG	2 cut(s)	59, 1425
Eco88I	CYCGRG	2 cut(s)	338, 776
EcoRII	CCWGG	2 cut(s)	153, 1454
EcoT14I	CCWWGG	2 cut(s)	677, 1080
ErhI	CCWWGG	2 cut(s)	677, 1080
FaeI	CATG	9 cut(s)	274, 466, 507, 532, 613, 681, 689, 1156, 1244
FaqI	GGGAC	2 cut(s)	538, 818
FatI	CATG	9 cut(s)	270, 462, 503, 528, 609, 677, 685, 1152, 1240
FauI	CCCGC	2 cut(s)	442, 618
FblI	GTMKAC	1 cut(s)	471
FokI	GGATG	2 cut(s)	322, 860
FspBI	CTAG	2 cut(s)	986, 1439
GlaI	GCGC	5 cut(s)	253, 397, 436, 438, 1183
GsaI	CCCAGC	1 cut(s)	23
GsuI	CTGGAG	1 cut(s)	605
HaeII	RGCGCY	1 cut(s)	1185
HaeIII	GGCC	4 cut(s)	5, 116, 162, 185
HapII	CCGG	6 cut(s)	84, 339, 399, 420, 758, 1179
HgaI	GACGC	4 cut(s)	52, 213, 343, 1337
HhaI	GCGC	5 cut(s)	254, 398, 437, 439, 1184
Hin1I	GRCGYC	2 cut(s)	335, 351
Hin1II	CATG	9 cut(s)	274, 466, 507, 532, 613, 681, 689, 1156, 1244
Hin6I	GCGC	5 cut(s)	252, 396, 435, 437, 1182
HinP1I	GCGC	5 cut(s)	252, 396, 435, 437, 1182
HindIII	AAGCTT	2 cut(s)	614, 951
HpaII	CCGG	6 cut(s)	84, 339, 399, 420, 758, 1179
HphI	GGTGA	5 cut(s)	91, 413, 434, 932, 1048
Hpy166II	GTNNAC	6 cut(s)	295, 375, 472, 858, 937, 1264
Hpy188I	TCNGA	6 cut(s)	513, 709, 792, 811, 1020, 1323
Hpy188III	TCNNGA	5 cut(s)	37, 589, 758, 776, 1439
Hpy8I	GTNNAC	6 cut(s)	295, 375, 472, 858, 937, 1264
Hpy99I	CGWCG	4 cut(s)	203, 206, 229, 337
HpyAV	CCTTC	3 cut(s)	112, 566, 882
HpyCH4III	ACNGT	4 cut(s)	11, 412, 538, 941
HpyCH4IV	ACGT	4 cut(s)	236, 297, 351, 377
HpyCH4V	TGCA	7 cut(s)	520, 599, 851, 902, 968, 1001, 1264
HpyF10VI	GCNNNNNNNGC	8 cut(s)	71, 145, 148, 182, 622, 646, 995, 1270
HpyF3I	CTNAG	4 cut(s)	455, 478, 641, 1284
HpySE526I	ACGT	4 cut(s)	236, 297, 351, 377
Hsp92I	GRCGYC	2 cut(s)	335, 351
Hsp92II	CATG	9 cut(s)	274, 466, 507, 532, 613, 681, 689, 1156, 1244
HspAI	GCGC	5 cut(s)	252, 396, 435, 437, 1182
Kpn2I	TCCGGA	1 cut(s)	757
Kzo9I	GATC	4 cut(s)	96, 508, 772, 1251
LguI	GCTCTTC	1 cut(s)	759
LmnI	GCTCC	5 cut(s)	51, 136, 252, 283, 1181
Lsp1109I	GCAGC	7 cut(s)	35, 126, 129, 132, 188, 231, 985
LweI	GCATC	4 cut(s)	838, 955, 998, 1371
MaeI	CTAG	2 cut(s)	986, 1439
MaeII	ACGT	4 cut(s)	236, 297, 351, 377
MaeIII	GTNAC	2 cut(s)	632, 920
MalI	GATC	4 cut(s)	98, 510, 774, 1253
MboI	GATC	4 cut(s)	96, 508, 772, 1251
MboII	GAAGA	6 cut(s)	52, 558, 665, 773, 776, 1418
MfeI	CAATTG	1 cut(s)	930
MhlI	GDGCHC	2 cut(s)	390, 1266
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	6 cut(s)	930, 1164, 1245, 1277, 1373, 1488
MluI	ACGCGT	1 cut(s)	1125
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	6 cut(s)	27, 434, 509, 685, 1085, 1470
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	1 cut(s)	757
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	2 cut(s)	752, 1495
MslI	CAYNNNNRTG	2 cut(s)	1019, 1126
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	179, 625, 1288
MspI	CCGG	6 cut(s)	84, 339, 399, 420, 758, 1179
MspR9I	CCNGG	4 cut(s)	155, 339, 340, 1456
MunI	CAATTG	1 cut(s)	930
Mva1269I	GAATGC	1 cut(s)	1014
MvaI	CCWGG	2 cut(s)	155, 1456
MvnI	CGCG	5 cut(s)	252, 254, 435, 437, 1127
MwoI	GCNNNNNNNGC	8 cut(s)	71, 145, 148, 182, 622, 646, 995, 1270
NciI	CCSGG	2 cut(s)	339, 340
NcoI	CCATGG	1 cut(s)	677
NdeII	GATC	4 cut(s)	96, 508, 772, 1251
NheI	GCTAGC	1 cut(s)	985
NlaIII	CATG	9 cut(s)	274, 466, 507, 532, 613, 681, 689, 1156, 1244
NlaIV	GGNNCC	3 cut(s)	231, 285, 1177
NmeAIII	GCCGAG	1 cut(s)	41
NmuCI	GTSAC	2 cut(s)	632, 920
NspI	RCATGY	2 cut(s)	466, 1156
OliI	CACNNNNGTG	1 cut(s)	1126
PaeI	GCATGC	1 cut(s)	466
PaeR7I	CTCGAG	1 cut(s)	776
PauI	GCGCGC	1 cut(s)	435
PceI	AGGCCT	1 cut(s)	185
PciSI	GCTCTTC	1 cut(s)	759
PcsI	WCGNNNNNNNCGW	1 cut(s)	233
PctI	GAATGC	1 cut(s)	1014
PfeI	GAWTC	5 cut(s)	262, 542, 710, 865, 1211
PflMI	CCANNNNNTGG	1 cut(s)	274
PinAI	ACCGGT	1 cut(s)	419
PleI	GAGTC	6 cut(s)	27, 433, 508, 685, 1085, 1470
PpsI	GAGTC	6 cut(s)	27, 433, 508, 685, 1085, 1470
Psp6I	CCWGG	2 cut(s)	153, 1454
PspFI	CCCAGC	1 cut(s)	19
PspGI	CCWGG	2 cut(s)	153, 1454
PspN4I	GGNNCC	3 cut(s)	231, 285, 1177
PspPI	GGNCC	3 cut(s)	115, 372, 1364
PstI	CTGCAG	1 cut(s)	1003
PteI	GCGCGC	1 cut(s)	435
PvuII	CAGCTG	1 cut(s)	1288
RsaI	GTAC	4 cut(s)	485, 857, 943, 1151
RsaNI	GTAC	4 cut(s)	484, 856, 942, 1150
RseI	CAYNNNNRTG	2 cut(s)	1019, 1126
SapI	GCTCTTC	1 cut(s)	759
SaqAI	TTAA	2 cut(s)	752, 1495
Sau3AI	GATC	4 cut(s)	96, 508, 772, 1251
Sau96I	GGNCC	3 cut(s)	115, 372, 1364
SchI	GAGTC	6 cut(s)	27, 434, 509, 685, 1085, 1470
ScrFI	CCNGG	4 cut(s)	155, 339, 340, 1456
SduI	GDGCHC	2 cut(s)	390, 1266
SfaNI	GCATC	4 cut(s)	838, 955, 998, 1371
SfcI	CTRYAG	2 cut(s)	999, 1368
Sfr274I	CTCGAG	1 cut(s)	776
SgrAI	CRCCGGYG	1 cut(s)	398
SinI	GGWCC	2 cut(s)	372, 1364
SlaI	CTCGAG	1 cut(s)	776
SmaI	CCCGGG	1 cut(s)	340
SmiMI	CAYNNNNRTG	2 cut(s)	1019, 1126
SmlI	CTYRAG	3 cut(s)	587, 776, 1157
SmoI	CTYRAG	3 cut(s)	587, 776, 1157
SphI	GCATGC	1 cut(s)	466
Sse9I	AATT	6 cut(s)	930, 1164, 1245, 1277, 1373, 1488
SseBI	AGGCCT	1 cut(s)	185
SspMI	CTAG	2 cut(s)	986, 1439
StuI	AGGCCT	1 cut(s)	185
StyD4I	CCNGG	4 cut(s)	153, 337, 338, 1454
StyI	CCWWGG	2 cut(s)	677, 1080
TaaI	ACNGT	4 cut(s)	11, 412, 538, 941
TaiI	ACGT	4 cut(s)	239, 300, 354, 380
TaqI	TCGA	5 cut(s)	198, 320, 777, 863, 1275
TasI	AATT	6 cut(s)	930, 1164, 1245, 1277, 1373, 1488
TatI	WGTACW	1 cut(s)	855
TauI	GCSGC	3 cut(s)	151, 257, 260
TfiI	GAWTC	5 cut(s)	262, 542, 710, 865, 1211
Tru1I	TTAA	2 cut(s)	752, 1495
Tru9I	TTAA	2 cut(s)	752, 1495
TseFI	GTSAC	2 cut(s)	632, 920
TseI	GCWGC	8 cut(s)	23, 139, 142, 145, 176, 244, 998, 1484
Tsp45I	GTSAC	2 cut(s)	632, 920
TspDTI	ATGAA	4 cut(s)	355, 517, 626, 1257
TspGWI	ACGGA	1 cut(s)	1411
TspMI	CCCGGG	1 cut(s)	338
Van91I	CCANNNNNTGG	1 cut(s)	274
VneI	GTGCAC	1 cut(s)	1262
VpaK11BI	GGWCC	2 cut(s)	372, 1364
XapI	RAATTY	1 cut(s)	1277
XbaI	TCTAGA	1 cut(s)	1438
XceI	RCATGY	2 cut(s)	466, 1156
XhoI	CTCGAG	1 cut(s)	776
XmaI	CCCGGG	1 cut(s)	338
XmiI	GTMKAC	1 cut(s)	471
XspI	CTAG	2 cut(s)	986, 1439
ZraI	GACGTC	1 cut(s)	352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.