pycom17g20950

Converts proline to delta-1-pyrroline-5-carboxylate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
19372870 .. 19375419
2550 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g20950.2

Sequence Viewer

Length: 1479 bp
ATGGCAAACCGAGTAATCCCGGCAGCGTCAAAACTCCTGAAAACTATCAGGCCACTCAACTCCGCCTCCACTAGCACCATCTCCGGCATATCCCCACCAATCGGCTTTTCCGAAAAAACATCACAAGCCACCACCACTGCCATCACCCCCGCCGACAACGCCGCCACTAACCTTTCCAACTTCGATGACGCGGACAAGCTGTTTGCGTCCGTCTCCACGTCACGGCTGTTGAGGACGGCGCTGAACCTCCACTTGGTGGGAATGGAGCCGATGGTGGACATTGGAATGTGGGTCATGCGGTCCAGGCTCATGCAGACTCCCTTAATCAAGGACGCGATCCTGGGGACCATACGGTCCACAATTTACGACCATTTTTGTGCTGGCGAGAACCCCTCGGCCACCGGAAAGTCGGTGCTGGAGCTTAACGAGTCGGGGCTGAGAGGGATGTTGGTTTACGCTCTCGAGTATGCCGGCGACAACGAGGCATGCGACAGGAACTTGCAAGGTTTCTTGGACACCGTTGAGTCCACCAAATCCCTGCCACCTTCTTCGGTGAGCTTTATAATTTTGAAAATCACTGCAATTTGCCCAATGAATCTACTTCAACGAGTGAGTGACTTGCTGAGATGGCAACAACAAGATCCTTCTTTCAATCTCCCATGGAAGCGTGACACGTTTCCCATTTTCTCCGAATCTAGCCCTCTTTACCACACCCTTAAAAAGCCGGAGCCTTTAACTCCTGAAGAAGAGCGTGATCTTGAATTAGTCCACCAAAGACTAATGAAATTGTCCCAAAACTGCGTAGAAGCCAATGTGCCTCTATCGATCGATGCAGAGTACACATCAATTCAACCGGCCATCGATTACTTGACCTACTCCTCTGCAATCATCTATAACAAAGATGACAACCCGATTGTTTATGGGACGATCCAAGCTTACCTGAAAGATGCAAAGGAAAGATTGTTGCTGGCAACAAAGGCTGCAGATATGATGGGTGTTCCGATGGGGTTCAAAGTGGTGAGGGGAGCTTATATGTCGAGTGAGGGAAAATTGGCTTCTTCCTTGGGCTATAAGTCTCCCATTCACGATTGCATTGAGGACACGCATGCGTGCTACAATGATTGTGCTTCGTTCATGCTTGAAAGGATTGCTAATGGCTCTGATGCCGTTGTTCTTGCAACCCATAATGTTGAATCAGGGAGACTAGCAATGGCAAAAGCACACGAAATTGGGGTCAGGAAGGTGCACCAGAAGCTTGAATTTGCACAACTGTACGGAATGGCAGAATCGCTTTCCTTTGGTCTAAAAAATGCAGGGTTTCAAGTAAGCAAGTACATGCCATTTGGACCGATACAGTTGGTTCTGCCTTACCTTCTAAGGAGGGCTGAAGAGAACAGGGGACTCTTAAATGCTTCATCTCTAGACAAACAACTAATAAGGGAGGAGCTGATGAGGAGACTCAAAGCAGCAATCTTCTAA

Protein Analysis

493

Amino Acids

54.4

Weight (kDa)

6.53

Isoelectric Point (pI)

42.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 563
AasI GACNNNNNNGTC 1 cut(s) 352
AccB7I CCANNNNNTGG 1 cut(s) 256
AccII CGCG 2 cut(s) 191, 335
AciI CCGC 5 cut(s) 63, 150, 162, 191, 298
AclWI GGATC 3 cut(s) 331, 635, 922
AcoI YGGCCR 2 cut(s) 396, 855
AcsI RAATTY 1 cut(s) 1259
AcuI CTGAAG 2 cut(s) 762, 1407
AdeI CACNNNGTG 1 cut(s) 256
AfaI GTAC 3 cut(s) 839, 1274, 1334
AfiI CCNNNNNNNGG 4 cut(s) 101, 222, 253, 256
AflIII ACRYGT 1 cut(s) 672
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 2 cut(s) 302, 339
AjuI GAANNNNNNNTTGG 4 cut(s) 91, 123, 236, 268
AluBI AGCT 7 cut(s) 199, 421, 558, 935, 1028, 1255, 1447
AluI AGCT 7 cut(s) 199, 421, 558, 935, 1028, 1255, 1447
Alw21I GWGCWC 1 cut(s) 1248
Alw26I GTCTC 4 cut(s) 217, 1080, 1195, 1450
Alw44I GTGCAC 1 cut(s) 1244
AlwI GGATC 3 cut(s) 331, 635, 922
Ama87I CYCGRG 1 cut(s) 461
AoxI GGCC 3 cut(s) 50, 396, 855
ApaLI GTGCAC 1 cut(s) 1244
ApeKI GCWGC 3 cut(s) 23, 980, 1466
ApoI RAATTY 1 cut(s) 1259
ArsI GACNNNNNNTTYG 4 cut(s) 185, 217, 1218, 1250
AspLEI GCGC 1 cut(s) 241
AspS9I GGNCC 4 cut(s) 300, 345, 354, 1346
AsuC2I CCSGG 1 cut(s) 20
AsuHPI GGTGA 3 cut(s) 136, 565, 1030
AvaI CYCGRG 1 cut(s) 461
AvaII GGWCC 4 cut(s) 300, 345, 354, 1346
BaeGI GKGCMC 1 cut(s) 1248
Bbv12I GWGCWC 1 cut(s) 1248
BbvI GCAGC 2 cut(s) 35, 967
BccI CCATC 7 cut(s) 86, 149, 265, 621, 866, 985, 997
BceAI ACGGC 3 cut(s) 239, 252, 1151
BciT130I CCWGG 2 cut(s) 304, 341
BcnI CCSGG 1 cut(s) 20
BcoDI GTCTC 4 cut(s) 217, 1080, 1195, 1450
BfaI CTAG 4 cut(s) 72, 696, 1205, 1421
BfmI CTRYAG 1 cut(s) 981
BfoI RGCGCY 1 cut(s) 242
BisI GCNGC 4 cut(s) 24, 162, 981, 1467
BlsI GCNGC 4 cut(s) 25, 163, 982, 1468
Bme1390I CCNGG 3 cut(s) 20, 304, 341
Bme18I GGWCC 4 cut(s) 300, 345, 354, 1346
BmeT110I CYCGRG 1 cut(s) 461
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 4 cut(s) 300, 345, 354, 1346
BmiI GGNNCC 3 cut(s) 267, 346, 729
BmrFI CCNGG 3 cut(s) 20, 304, 341
BmsI GCATC 3 cut(s) 820, 937, 1153
BplI GAGNNNNNCTC 2 cut(s) 377, 409
BpmI CTGGAG 1 cut(s) 437
BpuMI CCSGG 1 cut(s) 20
Bsa29I ATCGAT 3 cut(s) 824, 828, 861
BsaJI CCNNGG 4 cut(s) 340, 393, 659, 1062
BsaWI WCCGGW 1 cut(s) 401
BsaXI ACNNNNNCTCC 2 cut(s) 50, 80
Bsc4I CCNNNNNNNGG 4 cut(s) 101, 222, 253, 256
Bse118I RCCGGY 2 cut(s) 470, 853
Bse3DI GCAATG 1 cut(s) 1215
BseBI CCWGG 2 cut(s) 304, 341
BseCI ATCGAT 3 cut(s) 824, 828, 861
BseDI CCNNGG 4 cut(s) 340, 393, 659, 1062
BseGI GGATG 1 cut(s) 450
BseLI CCNNNNNNNGG 4 cut(s) 101, 222, 253, 256
BseMI GCAATG 1 cut(s) 1215
BseMII CTCAG 2 cut(s) 428, 614
BseRI GAGGAG 3 cut(s) 868, 1457, 1468
BseSI GKGCMC 1 cut(s) 1248
BseXI GCAGC 2 cut(s) 35, 967
Bsh1236I CGCG 2 cut(s) 191, 335
Bsh1285I CGRYCG 1 cut(s) 828
BshFI GGCC 3 cut(s) 52, 398, 857
BshVI ATCGAT 3 cut(s) 824, 828, 861
BsiEI CGRYCG 1 cut(s) 828
BsiHKAI GWGCWC 1 cut(s) 1248
BsiHKCI CYCGRG 1 cut(s) 461
BsiSI CCGG 6 cut(s) 20, 84, 402, 471, 725, 854
BslFI GGGAC 4 cut(s) 358, 775, 937, 1413
BslI CCNNNNNNNGG 4 cut(s) 101, 222, 253, 256
BsmAI GTCTC 4 cut(s) 217, 1080, 1195, 1450
BsmBI CGTCTC 1 cut(s) 217
BsmFI GGGAC 4 cut(s) 358, 775, 937, 1413
BsnI GGCC 3 cut(s) 52, 398, 857
BsoBI CYCGRG 1 cut(s) 461
Bsp1286I GDGCHC 1 cut(s) 1248
Bsp143I GATC 5 cut(s) 336, 640, 754, 825, 927
Bsp19I CCATGG 1 cut(s) 659
BspACI CCGC 5 cut(s) 63, 150, 162, 191, 298
BspANI GGCC 3 cut(s) 52, 398, 857
BspCNI CTCAG 2 cut(s) 429, 615
BspDI ATCGAT 3 cut(s) 824, 828, 861
BspFNI CGCG 2 cut(s) 191, 335
BspLI GGNNCC 3 cut(s) 267, 346, 729
BspMAI CTGCAG 1 cut(s) 985
BspPI GGATC 3 cut(s) 331, 635, 922
BspQI GCTCTTC 1 cut(s) 741
BsrDI GCAATG 1 cut(s) 1215
BsrFI RCCGGY 2 cut(s) 470, 853
BssAI RCCGGY 2 cut(s) 470, 853
BssECI CCNNGG 4 cut(s) 340, 393, 659, 1062
BssMI GATC 5 cut(s) 336, 640, 754, 825, 927
BssT1I CCWWGG 2 cut(s) 659, 1062
Bst2UI CCWGG 2 cut(s) 304, 341
Bst4CI ACNGT 4 cut(s) 354, 520, 1272, 1356
Bst6I CTCTTC 2 cut(s) 741, 1383
BstC8I GCNNGC 6 cut(s) 382, 472, 487, 969, 1107, 1111
BstDEI CTNAG 3 cut(s) 437, 623, 1376
BstDSI CCRYGG 1 cut(s) 659
BstF5I GGATG 1 cut(s) 450
BstFNI CGCG 2 cut(s) 191, 335
BstH2I RGCGCY 1 cut(s) 242
BstHHI GCGC 1 cut(s) 241
BstKTI GATC 5 cut(s) 339, 643, 757, 828, 930
BstMAI GTCTC 4 cut(s) 217, 1080, 1195, 1450
BstMBI GATC 5 cut(s) 336, 640, 754, 825, 927
BstMCI CGRYCG 1 cut(s) 828
BstMWI GCNNNNNNNGC 5 cut(s) 158, 304, 628, 977, 1252
BstNI CCWGG 2 cut(s) 304, 341
BstNSI RCATGY 3 cut(s) 489, 1109, 1339
BstSCI CCNGG 3 cut(s) 18, 302, 339
BstSFI CTRYAG 1 cut(s) 981
BstSLI GKGCMC 1 cut(s) 1248
BstUI CGCG 2 cut(s) 191, 335
BstV1I GCAGC 2 cut(s) 35, 967
BstX2I RGATCY 1 cut(s) 640
BstYI RGATCY 1 cut(s) 640
Bsu15I ATCGAT 3 cut(s) 824, 828, 861
BsuRI GGCC 3 cut(s) 52, 398, 857
BsuTUI ATCGAT 3 cut(s) 824, 828, 861
BtgI CCRYGG 1 cut(s) 659
BtrI CACGTC 1 cut(s) 219
BtsCI GGATG 1 cut(s) 450
BtsI GCAGTG 2 cut(s) 135, 576
BtsIMutI CAGTG 2 cut(s) 135, 576
Cac8I GCNNGC 6 cut(s) 382, 472, 487, 969, 1107, 1111
CfoI GCGC 1 cut(s) 241
Cfr10I RCCGGY 2 cut(s) 470, 853
Cfr13I GGNCC 4 cut(s) 300, 345, 354, 1346
ClaI ATCGAT 3 cut(s) 824, 828, 861
CseI GACGC 4 cut(s) 15, 195, 197, 341
Csp6I GTAC 3 cut(s) 838, 1273, 1333
CviAII CATG 7 cut(s) 295, 310, 486, 660, 1106, 1135, 1336
CviQI GTAC 3 cut(s) 838, 1273, 1333
DdeI CTNAG 3 cut(s) 437, 623, 1376
DpnI GATC 5 cut(s) 338, 642, 756, 827, 929
DpnII GATC 5 cut(s) 336, 640, 754, 825, 927
DraIII CACNNNGTG 1 cut(s) 256
DrdI GACNNNNNNGTC 1 cut(s) 352
DseDI GACNNNNNNGTC 1 cut(s) 352
EaeI YGGCCR 2 cut(s) 396, 855
Eam1104I CTCTTC 2 cut(s) 741, 1383
EarI CTCTTC 2 cut(s) 741, 1383
EciI GGCGGA 1 cut(s) 52
Eco130I CCWWGG 2 cut(s) 659, 1062
Eco47I GGWCC 4 cut(s) 300, 345, 354, 1346
Eco57I CTGAAG 2 cut(s) 762, 1407
Eco88I CYCGRG 1 cut(s) 461
EcoRII CCWGG 2 cut(s) 302, 339
EcoT14I CCWWGG 2 cut(s) 659, 1062
ErhI CCWWGG 2 cut(s) 659, 1062
Esp3I CGTCTC 1 cut(s) 217
FaeI CATG 7 cut(s) 298, 313, 489, 663, 1109, 1138, 1339
FaqI GGGAC 4 cut(s) 358, 775, 937, 1413
FatI CATG 7 cut(s) 294, 309, 485, 659, 1105, 1134, 1335
FauI CCCGC 1 cut(s) 157
Fnu4HI GCNGC 4 cut(s) 24, 162, 981, 1467
FokI GGATG 1 cut(s) 457
Fsp4HI GCNGC 4 cut(s) 24, 162, 981, 1467
FspBI CTAG 4 cut(s) 72, 696, 1205, 1421
GlaI GCGC 1 cut(s) 240
GluI GCNGC 4 cut(s) 24, 162, 981, 1467
GsuI CTGGAG 1 cut(s) 437
HaeII RGCGCY 1 cut(s) 242
HaeIII GGCC 3 cut(s) 52, 398, 857
HapII CCGG 6 cut(s) 20, 84, 402, 471, 725, 854
HgaI GACGC 4 cut(s) 15, 195, 197, 341
HhaI GCGC 1 cut(s) 241
Hin1II CATG 7 cut(s) 298, 313, 489, 663, 1109, 1138, 1339
Hin6I GCGC 1 cut(s) 239
HinP1I GCGC 1 cut(s) 239
HindIII AAGCTT 2 cut(s) 933, 1253
HinfI GANTC 9 cut(s) 316, 428, 524, 595, 692, 1193, 1286, 1401, 1458
HpaII CCGG 6 cut(s) 20, 84, 402, 471, 725, 854
HphI GGTGA 3 cut(s) 136, 565, 1030
Hpy166II GTNNAC 7 cut(s) 277, 357, 454, 528, 769, 840, 1246
Hpy188I TCNGA 4 cut(s) 112, 691, 1002, 1162
Hpy188III TCNNGA 7 cut(s) 37, 461, 740, 758, 1085, 1237, 1421
Hpy8I GTNNAC 7 cut(s) 277, 357, 454, 528, 769, 840, 1246
HpyAV CCTTC 4 cut(s) 555, 654, 1234, 1382
HpyCH4III ACNGT 4 cut(s) 354, 520, 1272, 1356
HpyCH4IV ACGT 2 cut(s) 218, 674
HpyF10VI GCNNNNNNNGC 5 cut(s) 158, 304, 628, 977, 1252
HpyF3I CTNAG 3 cut(s) 437, 623, 1376
HpySE526I ACGT 2 cut(s) 218, 674
Hsp92II CATG 7 cut(s) 298, 313, 489, 663, 1109, 1138, 1339
HspAI GCGC 1 cut(s) 239
KroI GCCGGC 1 cut(s) 470
KroNI GCCGGC 1 cut(s) 472
Kzo9I GATC 5 cut(s) 336, 640, 754, 825, 927
LguI GCTCTTC 1 cut(s) 741
LmnI GCTCC 5 cut(s) 265, 418, 727, 1025, 1444
Lsp1109I GCAGC 2 cut(s) 35, 967
LweI GCATC 3 cut(s) 820, 937, 1153
MaeI CTAG 4 cut(s) 72, 696, 1205, 1421
MaeII ACGT 2 cut(s) 218, 674
MaeIII GTNAC 3 cut(s) 219, 614, 668
MalI GATC 5 cut(s) 338, 642, 756, 827, 929
MboI GATC 5 cut(s) 336, 640, 754, 825, 927
MboII GAAGA 6 cut(s) 540, 755, 758, 1050, 1400, 1465
MflI RGATCY 1 cut(s) 640
MhlI GDGCHC 1 cut(s) 1248
MluCI AATT 9 cut(s) 360, 564, 582, 761, 785, 846, 1049, 1227, 1259
MlyI GAGTC 5 cut(s) 310, 437, 533, 1395, 1452
MmeI TCCRAC 1 cut(s) 201
MroNI GCCGGC 1 cut(s) 470
MseI TTAA 5 cut(s) 323, 423, 717, 734, 1406
MslI CAYNNNNRTG 2 cut(s) 284, 375
MspI CCGG 6 cut(s) 20, 84, 402, 471, 725, 854
MspR9I CCNGG 3 cut(s) 20, 304, 341
MvaI CCWGG 2 cut(s) 304, 341
MvnI CGCG 2 cut(s) 191, 335
MwoI GCNNNNNNNGC 5 cut(s) 158, 304, 628, 977, 1252
NaeI GCCGGC 1 cut(s) 472
NciI CCSGG 1 cut(s) 20
NcoI CCATGG 1 cut(s) 659
NdeII GATC 5 cut(s) 336, 640, 754, 825, 927
NgoMIV GCCGGC 1 cut(s) 470
NlaIII CATG 7 cut(s) 298, 313, 489, 663, 1109, 1138, 1339
NlaIV GGNNCC 3 cut(s) 267, 346, 729
NmeAIII GCCGAG 1 cut(s) 374
NmuCI GTSAC 3 cut(s) 219, 614, 668
NspI RCATGY 3 cut(s) 489, 1109, 1339
PaeI GCATGC 2 cut(s) 489, 1109
PaeR7I CTCGAG 1 cut(s) 461
PciSI GCTCTTC 1 cut(s) 741
PcsI WCGNNNNNNNCGW 2 cut(s) 108, 486
PdiI GCCGGC 1 cut(s) 472
PfeI GAWTC 4 cut(s) 595, 692, 1193, 1286
PflMI CCANNNNNTGG 1 cut(s) 256
PkrI GCNGC 4 cut(s) 25, 163, 982, 1468
Ple19I CGATCG 1 cut(s) 828
PleI GAGTC 5 cut(s) 310, 436, 532, 1395, 1452
PpsI GAGTC 5 cut(s) 310, 436, 532, 1395, 1452
PsiI TTATAA 1 cut(s) 563
Psp6I CCWGG 2 cut(s) 302, 339
PspGI CCWGG 2 cut(s) 302, 339
PspN4I GGNNCC 3 cut(s) 267, 346, 729
PspPI GGNCC 4 cut(s) 300, 345, 354, 1346
PstI CTGCAG 1 cut(s) 985
PsuI RGATCY 1 cut(s) 640
PvuI CGATCG 1 cut(s) 828
RsaI GTAC 3 cut(s) 839, 1274, 1334
RsaNI GTAC 3 cut(s) 838, 1273, 1333
RseI CAYNNNNRTG 2 cut(s) 284, 375
SapI GCTCTTC 1 cut(s) 741
SaqAI TTAA 5 cut(s) 323, 423, 717, 734, 1406
SatI GCNGC 4 cut(s) 24, 162, 981, 1467
Sau3AI GATC 5 cut(s) 336, 640, 754, 825, 927
Sau96I GGNCC 4 cut(s) 300, 345, 354, 1346
SchI GAGTC 5 cut(s) 310, 437, 533, 1395, 1452
ScrFI CCNGG 3 cut(s) 20, 304, 341
SduI GDGCHC 1 cut(s) 1248
SfaNI GCATC 3 cut(s) 820, 937, 1153
SfcI CTRYAG 1 cut(s) 981
Sfr274I CTCGAG 1 cut(s) 461
SinI GGWCC 4 cut(s) 300, 345, 354, 1346
SlaI CTCGAG 1 cut(s) 461
SmiMI CAYNNNNRTG 2 cut(s) 284, 375
SmlI CTYRAG 1 cut(s) 461
SmoI CTYRAG 1 cut(s) 461
SphI GCATGC 2 cut(s) 489, 1109
Sse9I AATT 9 cut(s) 360, 564, 582, 761, 785, 846, 1049, 1227, 1259
SsiI CCGC 5 cut(s) 63, 150, 162, 191, 298
SspMI CTAG 4 cut(s) 72, 696, 1205, 1421
StyD4I CCNGG 3 cut(s) 18, 302, 339
StyI CCWWGG 2 cut(s) 659, 1062
TaaI ACNGT 4 cut(s) 354, 520, 1272, 1356
TaiI ACGT 2 cut(s) 221, 677
TaqI TCGA 6 cut(s) 183, 462, 824, 828, 861, 1037
TaqII GACCGA 1 cut(s) 1363
TasI AATT 9 cut(s) 360, 564, 582, 761, 785, 846, 1049, 1227, 1259
TatI WGTACW 2 cut(s) 837, 1332
TauI GCSGC 1 cut(s) 164
TfiI GAWTC 4 cut(s) 595, 692, 1193, 1286
Tru1I TTAA 5 cut(s) 323, 423, 717, 734, 1406
Tru9I TTAA 5 cut(s) 323, 423, 717, 734, 1406
TscAI CASTG 2 cut(s) 142, 583
TseFI GTSAC 3 cut(s) 219, 614, 668
TseI GCWGC 3 cut(s) 23, 980, 1466
Tsp45I GTSAC 3 cut(s) 219, 614, 668
TspDTI ATGAA 4 cut(s) 608, 797, 1123, 1404
TspGWI ACGGA 2 cut(s) 199, 1290
TspRI CASTG 2 cut(s) 142, 583
Van91I CCANNNNNTGG 1 cut(s) 256
VneI GTGCAC 1 cut(s) 1244
VpaK11BI GGWCC 4 cut(s) 300, 345, 354, 1346
XapI RAATTY 1 cut(s) 1259
XbaI TCTAGA 1 cut(s) 1420
XceI RCATGY 3 cut(s) 489, 1109, 1339
XcmI CCANNNNNNNNNTGG 1 cut(s) 377
XhoI CTCGAG 1 cut(s) 461
XspI CTAG 4 cut(s) 72, 696, 1205, 1421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.